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Rolón-Martínez S, Mendoza AJ, Angeloni CF, Chen R, Haas JS, Geffen MN. Cell-specific inhibitory modulation of sound processing in the auditory thalamus. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.06.29.601250. [PMID: 38979223 PMCID: PMC11230419 DOI: 10.1101/2024.06.29.601250] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/10/2024]
Abstract
Inhibition along the auditory pathway is crucial for processing of acoustic information. Within the auditory thalamus, a key region in the central auditory pathway, inhibition is provided by the thalamic reticular nucleus (TRN), comprised of two large classes of inhibitory neurons, parvalbumin (PV TRN ) and somatostatin (SST TRN ) positive. In the auditory cortex, PV and SST neurons differentially shape auditory processing. We found that the ventral MGB, the thalamic region in the direct ascending auditory pathway, receives inputs predominantly from PV TRN neurons, whereas SST TRN neurons project to the dorso-medial regions of MGB. Consistently, inactivating PV TRN neurons increased sound-evoked activity in over a third of neurons in the vMGB, with another large fraction of neurons being suppressed. By contrast, inactivating SST TRN neuronal activity largely reduced tone-evoked activity in vMGB neurons. Cell type-specific computational models revealed candidate circuit mechanisms for generating the bi-directional effects of TRN inactivation on MGB sound responses. These differential inhibitory pathways within the auditory thalamus suggest a cell-specific role for thalamic inhibition in auditory computation and behavior.
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2
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Vaughn MJ, Laswick Z, Wang H, Haas JS. Functionally Distinct Circuits Are Linked by Heterocellular Electrical Synapses in the Thalamic Reticular Nucleus. eNeuro 2024; 11:ENEURO.0269-23.2023. [PMID: 38164593 PMCID: PMC10849028 DOI: 10.1523/eneuro.0269-23.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 11/10/2023] [Accepted: 12/18/2023] [Indexed: 01/03/2024] Open
Abstract
The thalamic reticular nucleus (TRN) inhibits sensory thalamocortical relay neurons and is a key regulator of sensory attention as well as sleep and wake states. Recent developments have identified two distinct genetic subtypes of TRN neurons, calbindin-expressing (CB) and somatostatin-expressing (SOM) neurons. These subtypes differ in localization within the TRN, electrophysiological properties, and importantly, targeting of thalamocortical relay channels. CB neurons send inhibition to and receive excitation from first-order thalamic relay nuclei, while SOM neurons send inhibition to and receive excitation from higher-order thalamic areas. These differences create distinct channels of information flow. It is unknown whether TRN neurons form electrical synapses between SOM and CB neurons and consequently bridge first-order and higher-order thalamic channels. Here, we use GFP reporter mice to label and record from CB-expressing and SOM-expressing TRN neurons. We confirm that GFP expression properly differentiates TRN subtypes based on electrophysiological differences, and we identified electrical synapses between pairs of neurons with and without common GFP expression for both CB and SOM types. That is, electrical synapses link both within and across subtypes of neurons in the TRN, forming either homocellular or heterocellular synapses. Therefore, we conclude that electrical synapses within the TRN provide a substrate for functionally linking thalamocortical first-order and higher-order channels within the TRN.
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Affiliation(s)
- Mitchell J Vaughn
- Department of Biological Sciences, Lehigh University, Bethlehem 18015, Pennsylvania
| | - Zachary Laswick
- Department of Biological Sciences, Lehigh University, Bethlehem 18015, Pennsylvania
| | - Huaixing Wang
- Department of Biological Sciences, Lehigh University, Bethlehem 18015, Pennsylvania
| | - Julie S Haas
- Department of Biological Sciences, Lehigh University, Bethlehem 18015, Pennsylvania
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Masoli S, Rizza MF, Tognolina M, Prestori F, D’Angelo E. Computational models of neurotransmission at cerebellar synapses unveil the impact on network computation. Front Comput Neurosci 2022; 16:1006989. [PMID: 36387305 PMCID: PMC9649760 DOI: 10.3389/fncom.2022.1006989] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Accepted: 10/10/2022] [Indexed: 11/25/2022] Open
Abstract
The neuroscientific field benefits from the conjoint evolution of experimental and computational techniques, allowing for the reconstruction and simulation of complex models of neurons and synapses. Chemical synapses are characterized by presynaptic vesicle cycling, neurotransmitter diffusion, and postsynaptic receptor activation, which eventually lead to postsynaptic currents and subsequent membrane potential changes. These mechanisms have been accurately modeled for different synapses and receptor types (AMPA, NMDA, and GABA) of the cerebellar cortical network, allowing simulation of their impact on computation. Of special relevance is short-term synaptic plasticity, which generates spatiotemporal filtering in local microcircuits and controls burst transmission and information flow through the network. Here, we present how data-driven computational models recapitulate the properties of neurotransmission at cerebellar synapses. The simulation of microcircuit models is starting to reveal how diverse synaptic mechanisms shape the spatiotemporal profiles of circuit activity and computation.
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Affiliation(s)
- Stefano Masoli
- Department of Brain and Behavioral Sciences, University of Pavia, Pavia, Italy
| | | | | | - Francesca Prestori
- Department of Brain and Behavioral Sciences, University of Pavia, Pavia, Italy
| | - Egidio D’Angelo
- Department of Brain and Behavioral Sciences, University of Pavia, Pavia, Italy
- IRCCS Mondino Foundation, Brain Connectivity Center, Pavia, Italy
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4
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Vaughn MJ, Haas JS. On the Diverse Functions of Electrical Synapses. Front Cell Neurosci 2022; 16:910015. [PMID: 35755782 PMCID: PMC9219736 DOI: 10.3389/fncel.2022.910015] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Accepted: 05/25/2022] [Indexed: 11/13/2022] Open
Abstract
Electrical synapses are the neurophysiological product of gap junctional pores between neurons that allow bidirectional flow of current between neurons. They are expressed throughout the mammalian nervous system, including cortex, hippocampus, thalamus, retina, cerebellum, and inferior olive. Classically, the function of electrical synapses has been associated with synchrony, logically following that continuous conductance provided by gap junctions facilitates the reduction of voltage differences between coupled neurons. Indeed, electrical synapses promote synchrony at many anatomical and frequency ranges across the brain. However, a growing body of literature shows there is greater complexity to the computational function of electrical synapses. The paired membranes that embed electrical synapses act as low-pass filters, and as such, electrical synapses can preferentially transfer spike after hyperpolarizations, effectively providing spike-dependent inhibition. Other functions include driving asynchronous firing, improving signal to noise ratio, aiding in discrimination of dissimilar inputs, or dampening signals by shunting current. The diverse ways by which electrical synapses contribute to neuronal integration merits furthers study. Here we review how functions of electrical synapses vary across circuits and brain regions and depend critically on the context of the neurons and brain circuits involved. Computational modeling of electrical synapses embedded in multi-cellular models and experiments utilizing optical control and measurement of cellular activity will be essential in determining the specific roles performed by electrical synapses in varying contexts.
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Affiliation(s)
- Mitchell J Vaughn
- Department of Biological Sciences, Lehigh University, Bethlehem, PA, United States
| | - Julie S Haas
- Department of Biological Sciences, Lehigh University, Bethlehem, PA, United States
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5
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Intrinsic Sources and Functional Impacts of Asymmetry at Electrical Synapses. eNeuro 2022; 9:ENEURO.0469-21.2022. [PMID: 35135867 PMCID: PMC8925721 DOI: 10.1523/eneuro.0469-21.2022] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2021] [Revised: 01/14/2022] [Accepted: 02/02/2022] [Indexed: 11/21/2022] Open
Abstract
Electrical synapses couple inhibitory neurons across the brain, underlying a variety of functions that are modifiable by activity. Despite recent advances, many functions and contributions of electrical synapses within neural circuitry remain underappreciated. Among these are the sources and impacts of electrical synapse asymmetry. Using multi-compartmental models of neurons coupled through dendritic electrical synapses, we investigated intrinsic factors that contribute to effective synaptic asymmetry and that result in modulation of spike timing and synchrony between coupled cells. We show that electrical synapse location along a dendrite, input resistance, internal dendritic resistance, or directional conduction of the electrical synapse itself each alter asymmetry as measured by coupling between cell somas. Conversely, we note that asymmetrical gap junction (GJ) conductance can be masked by each of these properties. Furthermore, we show that asymmetry modulates spike timing and latency of coupled cells by up to tens of milliseconds, depending on direction of conduction or dendritic location of the electrical synapse. Coordination of rhythmic activity between two cells also depends on asymmetry. These simulations illustrate that causes of asymmetry are diverse, may not be apparent in somatic measurements of electrical coupling, influence dendritic processing, and produce a variety of outcomes on spiking and synchrony of coupled cells. Our findings highlight aspects of electrical synapses that should always be included in experimental demonstrations of coupling, and when assembling simulated networks containing electrical synapses.
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Wang H, Haas JS. GABA BR Modulation of Electrical Synapses and Plasticity in the Thalamic Reticular Nucleus. Int J Mol Sci 2021; 22:ijms222212138. [PMID: 34830020 PMCID: PMC8621091 DOI: 10.3390/ijms222212138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Revised: 10/31/2021] [Accepted: 11/05/2021] [Indexed: 11/16/2022] Open
Abstract
Two distinct types of neuronal activity result in long-term depression (LTD) of electrical synapses, with overlapping biochemical intracellular signaling pathways that link activity to synaptic strength, in electrically coupled neurons of the thalamic reticular nucleus (TRN). Because components of both signaling pathways can also be modulated by GABAB receptor activity, here we examined the impact of GABAB receptor activation on the two established inductors of LTD in electrical synapses. Recording from patched pairs of coupled rat neurons in vitro, we show that GABAB receptor inactivation itself induces a modest depression of electrical synapses and occludes LTD induction by either paired bursting or metabotropic glutamate receptor (mGluR) activation. GABAB activation also occludes LTD from either paired bursting or mGluR activation. Together, these results indicate that afferent sources of GABA, such as those from the forebrain or substantia nigra to the reticular nucleus, gate the induction of LTD from either neuronal activity or afferent glutamatergic receptor activation. These results add to a growing body of evidence that the regulation of thalamocortical transmission and sensory attention by TRN is modulated and controlled by other brain regions. Significance: We show that electrical synapse plasticity is gated by GABAB receptors in the thalamic reticular nucleus. This effect is a novel way for afferent GABAergic input from the basal ganglia to modulate thalamocortical relay and is a possible mediator of intra-TRN inhibitory effects.
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Fricker B, Heckman E, Cunningham PC, Wang H, Haas JS. Activity-dependent long-term potentiation of electrical synapses in the mammalian thalamus. J Neurophysiol 2020; 125:476-488. [PMID: 33146066 DOI: 10.1152/jn.00471.2020] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Abstract
Activity-dependent changes of synapse strength have been extensively characterized at chemical synapses, but the relationship between physiological forms of activity and strength at electrical synapses remains poorly characterized and understood. For mammalian electrical synapses comprising hexamers of connexin36, physiological forms of neuronal activity in coupled pairs have thus far only been linked to long-term depression; activity that results in strengthening of electrical synapses has not yet been identified. Here, we performed dual whole-cell current-clamp recordings in acute slices of P11-P15 Sprague-Dawley rats of electrically coupled neurons of the thalamic reticular nucleus (TRN), a central brain area that regulates cortical input from and attention to the sensory surround. Using TTA-A2 to limit bursting, we show that tonic spiking in one neuron of a pair results in long-term potentiation of electrical synapses. We use experiments and computational modeling to show that the magnitude of plasticity expressed alters the functionality of the synapse. Potentiation is expressed asymmetrically, indicating that regulation of connectivity depends on the direction of use. Furthermore, calcium pharmacology and imaging indicate that potentiation depends on calcium flux. We thus propose a calcium-based activity rule for bidirectional plasticity of electrical synapse strength. Because electrical synapses dominate intra-TRN connectivity, these synapses and their activity-dependent modifications are key dynamic regulators of thalamic attention circuitry. More broadly, we speculate that bidirectional modifications of electrical synapses may be a widespread and powerful principle for ongoing, dynamic reorganization of neuronal circuitry across the brain.NEW & NOTEWORTHY This work reveals a physiologically relevant form of activity pairing in coupled neurons that results in long-term potentiation of mammalian electrical synapses. These findings, in combination with previous work, allow the authors to propose a bidirectional calcium-based rule for plasticity of electrical synapses, similar to those demonstrated for chemical synapses. These new insights inform the field on how electrical synapse plasticity may modify the neural circuits that incorporate them.
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Affiliation(s)
- Brandon Fricker
- Department of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania
| | - Emily Heckman
- Department of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania
| | | | - Huaixing Wang
- Department of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania
| | - Julie S Haas
- Department of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania
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8
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Brown JW, Taheri A, Kenyon RV, Berger-Wolf TY, Llano DA. Signal Propagation via Open-Loop Intrathalamic Architectures: A Computational Model. eNeuro 2020; 7:ENEURO.0441-19.2020. [PMID: 32005750 PMCID: PMC7053175 DOI: 10.1523/eneuro.0441-19.2020] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2019] [Revised: 01/13/2020] [Accepted: 01/20/2020] [Indexed: 01/06/2023] Open
Abstract
Propagation of signals across the cerebral cortex is a core component of many cognitive processes and is generally thought to be mediated by direct intracortical connectivity. The thalamus, by contrast, is considered to be devoid of internal connections and organized as a collection of parallel inputs to the cortex. Here, we provide evidence that "open-loop" intrathalamic pathways involving the thalamic reticular nucleus (TRN) can support propagation of oscillatory activity across the cortex. Recent studies support the existence of open-loop thalamo-reticulo-thalamic (TC-TRN-TC) synaptic motifs in addition to traditional closed-loop architectures. We hypothesized that open-loop structural modules, when connected in series, might underlie thalamic and, therefore cortical, signal propagation. Using a supercomputing platform to simulate thousands of permutations of a thalamocortical network based on physiological data collected in mice, rats, ferrets, and cats and in which select synapses were allowed to vary both by class and individually, we evaluated the relative capacities of closed-loop and open-loop TC-TRN-TC synaptic configurations to support both propagation and oscillation. We observed that (1) signal propagation was best supported in networks possessing strong open-loop TC-TRN-TC connectivity; (2) intrareticular synapses were neither primary substrates of propagation nor oscillation; and (3) heterogeneous synaptic networks supported more robust propagation of oscillation than their homogeneous counterparts. These findings suggest that open-loop, heterogeneous intrathalamic architectures might complement direct intracortical connectivity to facilitate cortical signal propagation.
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Affiliation(s)
- Jeffrey W Brown
- College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL 61801
| | - Aynaz Taheri
- Department of Computer Science, University of Illinois at Chicago, Chicago, IL 60607
| | - Robert V Kenyon
- Department of Computer Science, University of Illinois at Chicago, Chicago, IL 60607
| | - Tanya Y Berger-Wolf
- Department of Computer Science, University of Illinois at Chicago, Chicago, IL 60607
| | - Daniel A Llano
- College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL 61801
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL 61801
- Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, IL 61801
- Department of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, IL 61801
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9
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Li Q, Song JL, Li SH, Westover MB, Zhang R. Effects of Cholinergic Neuromodulation on Thalamocortical Rhythms During NREM Sleep: A Model Study. Front Comput Neurosci 2020; 13:100. [PMID: 32038215 PMCID: PMC6990259 DOI: 10.3389/fncom.2019.00100] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2019] [Accepted: 12/30/2019] [Indexed: 11/13/2022] Open
Abstract
It has been suggested that cholinergic neurons shape the oscillatory activity of the thalamocortical (TC) network in behavioral and electrophysiological experiments. However, theoretical modeling demonstrating how cholinergic neuromodulation of thalamocortical rhythms during non-rapid eye movement (NREM) sleep might occur has been lacking. In this paper, we first develop a novel computational model (TC-ACH) by incorporating a cholinergic neuron population (CH) into the classical thalamo-cortical circuitry, where connections between populations are modeled in accordance with existing knowledge. The neurotransmitter acetylcholine (ACH) released by neurons in CH, which is able to change the discharge activity of thalamocortical neurons, is the primary focus of our work. Simulation results with our TC-ACH model reveal that the cholinergic projection activity is a key factor in modulating oscillation patterns in three ways: (1) transitions between different patterns of thalamocortical oscillations are dramatically modulated through diverse projection pathways; (2) the model expresses a stable spindle oscillation state with certain parameter settings for the cholinergic projection from CH to thalamus, and more spindles appear when the strength of cholinergic input from CH to thalamocortical neurons increases; (3) the duration of oscillation patterns during NREM sleep including K-complexes, spindles, and slow oscillations is longer when cholinergic input from CH to thalamocortical neurons becomes stronger. Our modeling results provide insights into the mechanisms by which the sleep state is controlled, and provide a theoretical basis for future experimental and clinical studies.
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Affiliation(s)
- Qiang Li
- Medical Big Data Research Center, Northwest University, Xi'an, China
- Department of Neurology, Massachusetts General Hospital, Boston, MA, United States
| | - Jiang-Ling Song
- Medical Big Data Research Center, Northwest University, Xi'an, China
- Department of Neurology, Massachusetts General Hospital, Boston, MA, United States
| | - Si-Hui Li
- Medical Big Data Research Center, Northwest University, Xi'an, China
| | - M. Brandon Westover
- Department of Neurology, Massachusetts General Hospital, Boston, MA, United States
| | - Rui Zhang
- Medical Big Data Research Center, Northwest University, Xi'an, China
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10
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Aizenberg M, Rolón-Martínez S, Pham T, Rao W, Haas JS, Geffen MN. Projection from the Amygdala to the Thalamic Reticular Nucleus Amplifies Cortical Sound Responses. Cell Rep 2019; 28:605-615.e4. [PMID: 31315041 PMCID: PMC7081884 DOI: 10.1016/j.celrep.2019.06.050] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Revised: 04/29/2019] [Accepted: 06/13/2019] [Indexed: 12/16/2022] Open
Abstract
Many forms of behavior require selective amplification of neuronal representations of relevant environmental signals. Emotional learning enhances sensory responses in the sensory cortex, yet the underlying circuits remain poorly understood. We identify a pathway between the basolateral amygdala (BLA), an emotional learning center in the mouse brain, and the inhibitory reticular nucleus of the thalamus (TRN). Optogenetic activation of BLA suppressed spontaneous, but not tone-evoked, activity in the auditory cortex (AC), amplifying tone-evoked responses. Viral tracing identified BLA projections terminating at TRN. Optogenetic activation of amygdala-TRN projections further amplified tone-evoked responses in the auditory thalamus and cortex. The results are explained by a computational model of the thalamocortical circuitry, in which activation of TRN by BLA primes thalamocortical neurons to relay relevant sensory input. This circuit mechanism shines a neural spotlight on behaviorally relevant signals and provides a potential target for the treatment of neuropsychological disorders.
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Affiliation(s)
- Mark Aizenberg
- Department of Otorhinolaryngology: HNS, Department of Neuroscience, University of Pennsylvania, Philadelphia, PA, USA
| | - Solymar Rolón-Martínez
- Department of Otorhinolaryngology: HNS, Department of Neuroscience, University of Pennsylvania, Philadelphia, PA, USA
| | - Tuan Pham
- Department of Biological Sciences, Lehigh University, Bethlehem, PA, USA
| | - Winnie Rao
- Department of Otorhinolaryngology: HNS, Department of Neuroscience, University of Pennsylvania, Philadelphia, PA, USA
| | - Julie S Haas
- Department of Biological Sciences, Lehigh University, Bethlehem, PA, USA
| | - Maria N Geffen
- Department of Otorhinolaryngology: HNS, Department of Neuroscience, University of Pennsylvania, Philadelphia, PA, USA.
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11
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Pham T, Haas JS. Electrical synapses regulate both subthreshold integration and population activity of principal cells in response to transient inputs within canonical feedforward circuits. PLoS Comput Biol 2019; 15:e1006440. [PMID: 30802238 PMCID: PMC6405166 DOI: 10.1371/journal.pcbi.1006440] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2018] [Revised: 03/07/2019] [Accepted: 01/29/2019] [Indexed: 12/05/2022] Open
Abstract
As information about the world traverses the brain, the signals exchanged between neurons are passed and modulated by synapses, or specialized contacts between neurons. While neurotransmitter-based synapses tend to exert either excitatory or inhibitory pulses of influence on the postsynaptic neuron, electrical synapses, composed of plaques of gap junction channels, continuously transmit signals that can either excite or inhibit a coupled neighbor. A growing body of evidence indicates that electrical synapses, similar to their chemical counterparts, are modified in strength during physiological neuronal activity. The synchronizing role of electrical synapses in neuronal oscillations has been well established, but their impact on transient signal processing in the brain is much less understood. Here we constructed computational models based on the canonical feedforward neuronal circuit and included electrical synapses between inhibitory interneurons. We provided discrete closely-timed inputs to the circuits, and characterize the influence of electrical synapse strength on both subthreshold summation and spike trains in the output neuron. Our simulations highlight the diverse and powerful roles that electrical synapses play even in simple circuits. Because these canonical circuits are represented widely throughout the brain, we expect that these are general principles for the influence of electrical synapses on transient signal processing across the brain. The roles that electrical synapses play in neural oscillations, network synchronization and rhythmicity are well established, but their roles in neuronal processing of transient inputs are much less understood. Here, we used computational models of canonical feedforward circuits and networks to investigate how electrical synapses regulate the flow of transient signals passing through those circuits. We show that because the influence of electrical synapses on coupled neighbors can be either inhibitory or excitatory, their role in network information processing is heterogeneous, and powerful. Because electrical synapses between interneurons are widespread across the brain, and in addition to a growing body of evidence for their activity-dependent plasticity, we expect the effects we describe here to play a substantial role in how the brain processes incoming sensory inputs.
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Affiliation(s)
- Tuan Pham
- Department of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania, United States of America
| | - Julie S. Haas
- Department of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania, United States of America
- * E-mail:
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12
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Doruk RO, Zhang K. Fitting of dynamic recurrent neural network models to sensory stimulus-response data. J Biol Phys 2018; 44:449-469. [PMID: 29860641 PMCID: PMC6082798 DOI: 10.1007/s10867-018-9501-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2017] [Accepted: 05/07/2018] [Indexed: 01/22/2023] Open
Abstract
We present a theoretical study aiming at model fitting for sensory neurons. Conventional neural network training approaches are not applicable to this problem due to lack of continuous data. Although the stimulus can be considered as a smooth time-dependent variable, the associated response will be a set of neural spike timings (roughly the instants of successive action potential peaks) that have no amplitude information. A recurrent neural network model can be fitted to such a stimulus-response data pair by using the maximum likelihood estimation method where the likelihood function is derived from Poisson statistics of neural spiking. The universal approximation feature of the recurrent dynamical neuron network models allows us to describe excitatory-inhibitory characteristics of an actual sensory neural network with any desired number of neurons. The stimulus data are generated by a phased cosine Fourier series having a fixed amplitude and frequency but a randomly shot phase. Various values of amplitude, stimulus component size, and sample size are applied in order to examine the effect of the stimulus to the identification process. Results are presented in tabular and graphical forms at the end of this text. In addition, to demonstrate the success of this research, a study involving the same model, nominal parameters and stimulus structure, and another study that works on different models are compared to that of this research.
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Affiliation(s)
- R Ozgur Doruk
- Department of Electrical and Electronics Engineering, Atilim University, Kizilcasar Mahallesi, Incek, Golbasi, Ankara, 06836, Turkey.
| | - Kechen Zhang
- Department of Biomedical Engineering, Johns Hopkins School of Medicine, 720 Rutland Avenue, Traylor 407, Baltimore, MD, 21205, USA
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