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Poullet N, Devarieux O, Beramice D, Dantec L, Félicité Y, Feuillet D, Gourdine JL, Bambou JC. Comparative analysis of whole blood transcriptomics between European and local Caribbean pigs in response to feed restriction in a tropical climate. BMC Genomics 2023; 24:292. [PMID: 37254043 DOI: 10.1186/s12864-023-09381-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Accepted: 05/15/2023] [Indexed: 06/01/2023] Open
Abstract
BACKGROUND Feed restriction occurs frequently during pig growth, either due to economic reasons or stressful environmental conditions. Local breeds are suggested to have better tolerance to periods of feed restriction. However, the mechanisms underlying the response to feed restriction in different breeds is largely unknown. The aims of the present study were (1) to compare the blood transcriptome profile in response to feed restriction and refeeding of two contrasted breeds, Large White (LW), which has been selected for high performance, and Creole (CR), which is adapted to tropical conditions, and (2) to investigate the effect of a moderate feed restriction and refeeding on whole blood transcriptome. Analysis of blood transcriptome allows to study the response to feed restriction and refeeding in a dynamic way. RNAseq was performed on blood samples of growing LW and CR pigs at two time points: after 3 weeks of feed restriction and after 3 weeks of refeeding. The data was compared with samples from control animals offered the same diet on an ad libitum basis throughout the whole experiment. RESULTS In terms of performance (body weight and feed efficiency), CR pigs were less impacted by feed restriction than LW. The transcriptional response to feed restriction and refeeding between CR and LW was contrasted both in terms of number of DEGs and enriched pathways. CR demonstrated a stronger transcriptional response to feed restriction whereas LW had a stronger response to refeeding. Differences in the transcriptional response to feed restriction between CR and LW were related to cell stress response (Aldosterone Signalling, Protein ubiquitination, Unfolded Protein Signalling) whereas after refeeding, differences were linked to thermogenesis, metabolic pathways and cell proliferation (p38 MAPK, ERK/MAPK pathway). In both breeds, transcriptional changes related to the immune response were found after restriction and refeeding. CONCLUSIONS Altogether, the present study indicates that blood transcriptomics can be a useful tool to study differential genetic response to feed restriction in a dynamic way. The results indicate a differential response of blood gene expression to feed restriction and refeeding between breeds, affecting biological pathways that are in accordance with performance and thermoregulatory results.
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Affiliation(s)
- Nausicaa Poullet
- ASSET, INRAE, Petit-Bourg (Guadeloupe), ²PTEA, INRAE, Petit-Bourg (Guadeloupe), 97170, France.
| | - Orianne Devarieux
- ASSET, INRAE, Petit-Bourg (Guadeloupe), ²PTEA, INRAE, Petit-Bourg (Guadeloupe), 97170, France
| | | | | | - Yoann Félicité
- ASSET, INRAE, Petit-Bourg (Guadeloupe), ²PTEA, INRAE, Petit-Bourg (Guadeloupe), 97170, France
| | - Dalila Feuillet
- ASSET, INRAE, Petit-Bourg (Guadeloupe), ²PTEA, INRAE, Petit-Bourg (Guadeloupe), 97170, France
| | - Jean-Luc Gourdine
- ASSET, INRAE, Petit-Bourg (Guadeloupe), ²PTEA, INRAE, Petit-Bourg (Guadeloupe), 97170, France
| | - Jean-Christophe Bambou
- ASSET, INRAE, Petit-Bourg (Guadeloupe), ²PTEA, INRAE, Petit-Bourg (Guadeloupe), 97170, France
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Peris SIE, Abd El-Latif KM. Effect of feed restriction on growth performance, carcass traits, and some hematological and blood biochemical parameters in growing rabbits. Anim Biotechnol 2023; 34:67-76. [PMID: 34138689 DOI: 10.1080/10495398.2021.1935983] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
Abstract
Sixty-four male New Zealand White rabbits, 4 weeks old, were used to study the effects of feed restriction (FR) on growth performance, carcass traits, and some blood parameters. Rabbits were randomly allotted to 4 equal groups. The first group was fed ad libitum (control group). The second, third, and fourth groups were restricted from 4 to 8 (R4-8), 8 to 12 (R8-12), and 4 to 12 (R4-12) weeks of age, respectively. Restricted groups were fed 85% of the control. Means of live body weights (LBW), average daily gain weights (ADGW), relative growth rate (RGR) were calculated. Carcass traits and blood parameters were measured. Results showed that, FR reduced LBW, ADGW and RGR in R4-8 and R4-12 groups. However, FR did not impair the previous traits in R8-12 group. Carcass weight was not impaired in R8-12 group. However, FR reduced kidney fat in all restricted groups. Feed restriction reduced hemoglobin, red blood cell (RBC) and platelet levels in R4-8 and/or R4-12 groups. However, RBC and platelet levels were not altered in R8-12 group. Conclusively, FR impaired growth performance, carcass weight and blood parameters in R4-8 and R4-12 groups, however, the previous traits were not impaired in R8-12 group.
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Affiliation(s)
- Soliman I E Peris
- Faculty of Agriculture, Department of Animal Production, Zagazig University, Zagazig, Egypt
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Sánchez JP, Ragab M, Mínguez C, Piles M. Genotype by feeding regimen interactions for slaughter traits in rabbit and expected responses under restricted and full feeding. J Anim Breed Genet 2022; 139:530-539. [PMID: 35557470 DOI: 10.1111/jbg.12719] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Accepted: 05/03/2022] [Indexed: 11/30/2022]
Abstract
The interaction between the genotype and feeding regimen (G×FR) for slaughter traits was estimated from data corresponding to 2557 animals under full (FF) and 2424 with restricted feeding (RF). Expected responses to selection under different scenario regarding feeding regimen were also calculated. Body weight at slaughter (SW), carcass weight (CW) and dressing out percentage (DoP) were analysed by using linear animal models in which records obtained under different feeding regimes were treated as different traits. Animals belonged to Caldes line, selected for average daily gain (G) under ad libitum feeding. The selection process information was included in the analyses. Marginal posterior mean of heritabilities were 0.102 for G, and 0.364, 0.257 and 0.167 for SW, CW and DoP under FF feeding. The corresponding values for animals fed on RF were 0.243, 0.203 and 0.379 for SW, CW and DoP, respectively. Genetic correlations between G and CW were positive and moderate, and those between G and DoP were low. The estimated genetic correlation between SW, CW and DoP under different feeding regimens were: 0.73, 0.69 and 0.87, respectively. These correlations cannot be said to be far enough from one to generate relevant G×FR interaction variance, which were estimated to be only 11.1%, 8.6% and 5.3% of the mean of the phenotypic variance for SW, CW and DoP, respectively. This lack of G×FR interaction variance, jointly with the higher heritability of DoP under RF, explains that the genetic improvement of DoP can be done more efficiently recording traits on animals under RF, even if the interest is on the performances under FF, i.e. by indirect selection.
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Affiliation(s)
- Juan Pablo Sánchez
- Genetica i Millora Animal, Institut de Recerca i Tecnologia Agroalimentàries, Barcelona, Spain
| | - Mohamed Ragab
- Genetica i Millora Animal, Institut de Recerca i Tecnologia Agroalimentàries, Barcelona, Spain.,Poultry Production Department, Kafer El-Sheikh Univ., Kafer El-Sheikh, Egypt
| | - Carlos Mínguez
- Departamento de Producción Animal y Salud Publica, Facultad de Veterinaria y Ciencias Experimentales, Universidad Católica de Valencia San Vicente Martir, Valencia, Spain
| | - Miriam Piles
- Genetica i Millora Animal, Institut de Recerca i Tecnologia Agroalimentàries, Barcelona, Spain
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Bonneau M, Poullet N, Beramice D, Dantec L, Canario L, Gourdine JL. Behavior Comparison During Chronic Heat Stress in Large White and Creole Pigs Using Image-Analysis. FRONTIERS IN ANIMAL SCIENCE 2021. [DOI: 10.3389/fanim.2021.784376] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Behavior is a good indicator of animal welfare, especially in challenging environments. However, few studies have investigated how pig behavior changes during heat stress. The current study is a proof-of-concept using Convolutional Neural Network (CNN) models to monitor pig behavior in order to investigate the differences in behavioral response to heat stress of two contrasted breeds: Large White (LW), selected for high performance, and Creole (CR), adapted to tropical conditions. A total of 6 slaughter pigs (3 CR and 3 LW; 22 weeks of age) were monitored from 8:30 to 17:30 during 54 days. Two CNN architectures were used to detect the animal (Yolo v2) and to estimate animal's posture (GoogleNet). Pig postures estimated by the neural network showed that pigs spent more time lying on their side when temperature increased. When comparing the two breeds, as temperature increases, CR pigs spent more time lying on their side than LW pigs, suggesting that they use this posture to increase thermoregulation and dissipate heat more efficiently. This study demonstrates that neural network models are an efficient tool to monitor animal behavior in an automated way, which could be particularly relevant to characterize breed adaptation to challenging environments.
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Effects of Feed Removal during Acute Heat Stress on the Cytokine Response and Short-Term Growth Performance in Finishing Pigs. Animals (Basel) 2021; 11:ani11010205. [PMID: 33467772 PMCID: PMC7830497 DOI: 10.3390/ani11010205] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2020] [Revised: 01/04/2021] [Accepted: 01/13/2021] [Indexed: 12/26/2022] Open
Abstract
The study objective was to evaluate the effects of feed removal during acute heat stress (HS) on the cytokine response and its short-term effect on growth performance in finishing pigs. Thirty-two pigs (93.29 ± 3.14 kg initial body weight; 50% barrows and 50% gilts) were subjected to thermoneutral (TN; 23.47 ± 0.10 °C; n = 16 pigs) or HS (cycling of 25 to 36 °C; n = 16 pigs) conditions for 24 h. Within each temperature treatment, 50% of the pigs were provided with feed (AF; n = 8 pigs/temperature treatment) and 50% of the pigs had no feed access (NF; n = 8 pigs/temperature treatment). Following the 24 h temperature and feeding treatment (TF) period, all pigs had ad libitum access to feed and water and were maintained under TN conditions for 6 d. During the first 12 h of the TF period, gastrointestinal (TGI) and skin (Tsk) temperatures were recorded every 30 min. Serum cytokines were determined at 0, 4, 8, 12, and 24 h during the TF period and on Days 3 and 6 of the post-TF period. Average daily gain (ADG) and average daily feed intake were measured on Days 1, 3, and 6 of the post-TF period. Behavioral data were collected from Days 1 to 6 of the post-TF period. Heat stress increased (p < 0.02) the TGI and Tsk. During the post-TF period, interleukin-1α was greater (p < 0.01) in HS + NF compared to HS + AF and TN + NF pigs. From Days 1 to 2 of the post-TF period, the ADG was reduced (p < 0.01) in TN + AF compared to HS + AF, HS + NF, and TN + NF pigs. In conclusion, feed removal during an acute HS challenge did not reduce the cytokine response or improve short-term growth performance in finishing pigs.
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Alexandre G, Rodriguez L, Arece J, Delgadillo J, Garcia GW, Habermeier K, Almeida AM, Fanchone A, Gourdine JL, Archimède H. Agroecological practices to support tropical livestock farming systems: a Caribbean and Latin American perspective. Trop Anim Health Prod 2021; 53:111. [PMID: 33432505 DOI: 10.1007/s11250-020-02537-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2020] [Accepted: 12/17/2020] [Indexed: 12/14/2022]
Abstract
With global climate changes currently occurring, and particularly given the severe energy and food shortages occurring throughout tropical regions, agroecological (AE) systems are drawing renewed attention as an efficient alternative to intensive models of production, particularly unsuitable in regions of the world such as the Caribbean or Latin America. There is a pressing need to focus on livestock farming systems (LFS) and characterize their potential contributions to global sustainability. A multidisciplinary approach is needed to address these multiple and complex problems. Traditionally, LFS have shown their sustainability high potential. The purpose of this work is to highlight solutions to minimize inputs, by describing some success and diverse case studies through the Caribbean. These systems were analyzed at different levels: animal/function, farm/family, and territory/society. This produced a set of guidelines that help to increase the efficiency of tropical systems, particularly those concerned with (1) choosing the best-suited genotypes, while enhancing population biodiversity; (2) matching the farming system to the available resources, feed, and by-products; (3) steering the whole farming system through reproduction management with no hormonal treatment, while facilitating system reproducibility and increasing performances; (4) controlling health constraints instead of annihilating risks and implement an integrated management design to reduce chemical treatments or increase the use of nutraceuticals; and (5) mitigating climate constraints by using soft techniques. In the second part of this work, some integrated systems are described. The Tosoly farm of Colombia, for instance, is conceived as a totally integrated crop-livestock system, allowing the additional production of energy at the farm level. Thus, it epitomizes the positive impact that livestock can exert upon the environment. The case study of Haiti indicates how AE practices can help in designing a pro-poor sustainable milk production system. It concerns an entire dairy sector built all over the country on the basis of micro-units of milk production and processing.
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Affiliation(s)
- Gisele Alexandre
- INRA, UR143, Unité de Recherches Zootechniques, 97170 Petit-Bourg, Guadeloupe, French West Indies, France.
| | | | - Javier Arece
- Estación Experimental de Pastos y Forrajes "Indio Hatuey", Universidad de Matanzas "Camilo Cienfuegos", CP 44280, Matanzas, Cuba
| | - José Delgadillo
- Centro de Investigación en Reproducción Caprina, Universidad Autónoma Agraria Antonio Narro, C.P. 27054, Torreón, Coahuila, Mexico
| | - Gary Wayne Garcia
- The Open Tropical Forage-Animal Production Laboratory, Department of Food Production, Faculty of Food and Agriculture, The University of the West Indies, St. Augustine Campus, St. Augustine Campus, Trinidad and Tobago
| | - Kurt Habermeier
- Plateforme d'Agroécologie et de Développement Durable (PADED)-Misereor, 10, impasse Basilic, Delmas 65, Haiti
| | - André M Almeida
- LEAF, Instituto Superior de Agronomia, University of Lisbon, Tapada da Ajuda, Lisbon, Portugal
| | - Audrey Fanchone
- INRA, UR143, Unité de Recherches Zootechniques, 97170 Petit-Bourg, Guadeloupe, French West Indies, France
| | - Jean-Luc Gourdine
- INRA, UR143, Unité de Recherches Zootechniques, 97170 Petit-Bourg, Guadeloupe, French West Indies, France
| | - Harry Archimède
- INRA, UR143, Unité de Recherches Zootechniques, 97170 Petit-Bourg, Guadeloupe, French West Indies, France
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Silvestre Vasconcelos T, Thomaz MC, Castelini FR, Versuti Arantes Alvarenga P, Alves de Oliveira J, Ferreira Ramos G, Keith Ono R, Milani NC, dos Santos Ruiz U. Evaluation of pineapple byproduct at increasing levels in heavy finishing pigs feeding. Anim Feed Sci Technol 2020. [DOI: 10.1016/j.anifeedsci.2020.114664] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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8
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Ahmadzadeh L, Hosseinkhani A, Taghizadeh A, Ghasemi-Panahi B, Hamidian G. Effect of late gestational feed restriction and glucogenic precursor on behaviour and performance of Ghezel ewes and their offspring. Appl Anim Behav Sci 2020. [DOI: 10.1016/j.applanim.2020.105030] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Fourcot A, Feidt C, Bousquet-Mélou A, Ferran AA, Gourdine JL, Bructer M, Joaquim-Justo C, Rychen G, Fournier A. Modeling chlordecone toxicokinetics data in growing pigs using a nonlinear mixed-effects approach. CHEMOSPHERE 2020; 250:126151. [PMID: 32092563 DOI: 10.1016/j.chemosphere.2020.126151] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2019] [Revised: 02/04/2020] [Accepted: 02/06/2020] [Indexed: 06/10/2023]
Abstract
The use of chlordecone (CLD), a chlorinated polycyclic pesticide used in the French West Indies banana fields between 1972 and 1993, resulted in a long-term pollution of agricultural areas. It has been observed that this persistent organic pollutant (POP) can transfer from contaminated soils to food chain. Indeed, CLD is considered almost fully absorbed after involuntary ingestion of contaminated soil by outdoor reared animals. The aim of this study was to model toxicokinetics (TKs) of CLD in growing pigs using both non-compartmental and nonlinear mixed-effects approaches (NLME). In this study, CLD dissolved in cremophor was intravenously administrated to 7 Creole growing pigs and 7 Large White growing pigs (1 mg kg-1 body weight). Blood samples were collected from time t = 0 to time t = 84 days. CLD concentrations in serum were measured by GCMS/MS. Data obtained were modeled using Monolix (2019R). Results demonstrated that a bicompartmental model best described CLD kinetics in serum. The influence of covariates (breed, initial weight and average daily gain) was simultaneously evaluated and showed that average daily gain is the main covariate explaining inter-individual TKs parameters variability. Body clearance was of 76.7 mL kg-1 d-1 and steady-state volume of distribution was of 6 L kg-1. This modeling approach constitutes the first application of NLME to study CLD TKs in farm animals and will be further used for rearing management practices in contaminated areas.
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Affiliation(s)
- A Fourcot
- Université de Lorraine, INRAE, USC 340, UR AFPA, 2 Avenue de la Forêt de Haye, TSA 40602, 54518, Vandœuvre-lès-Nancy, France
| | - C Feidt
- Université de Lorraine, INRAE, USC 340, UR AFPA, 2 Avenue de la Forêt de Haye, TSA 40602, 54518, Vandœuvre-lès-Nancy, France
| | - A Bousquet-Mélou
- INTHERES, Université de Toulouse, INRAE, ENVT, 31000, Toulouse, France
| | - A A Ferran
- INTHERES, Université de Toulouse, INRAE, ENVT, 31000, Toulouse, France
| | - J L Gourdine
- Unité de Recherches Zootechniques, INRAE, URZ UR143, Domaine Duclos, 97170, Petit-Bourg, France
| | - M Bructer
- Plateforme Tropicale d'Expérimentation sur l'Animal, INRAE, PTEA UE1294, 97170, Petit-Bourg, France
| | - C Joaquim-Justo
- Université de Liège, LEAE-CART, Freshwater and Oceanic Sciences Unit of Research (FOCUS), B6C, Allée du 6 Août, 11, 4000, Liège, Belgium
| | - G Rychen
- Université de Lorraine, INRAE, USC 340, UR AFPA, 2 Avenue de la Forêt de Haye, TSA 40602, 54518, Vandœuvre-lès-Nancy, France
| | - A Fournier
- Université de Lorraine, INRAE, USC 340, UR AFPA, 2 Avenue de la Forêt de Haye, TSA 40602, 54518, Vandœuvre-lès-Nancy, France.
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Rauw WM, Rydhmer L, Kyriazakis I, Øverland M, Gilbert H, Dekkers JCM, Hermesch S, Bouquet A, Gómez Izquierdo E, Louveau I, Gomez‐Raya L. Prospects for sustainability of pig production in relation to climate change and novel feed resources. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2020; 100:3575-3586. [PMID: 32077492 PMCID: PMC7318173 DOI: 10.1002/jsfa.10338] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Revised: 02/01/2020] [Accepted: 02/19/2020] [Indexed: 05/13/2023]
Abstract
Pig production systems provide multiple benefits to humans. However, the global increase in meat consumption has profound consequences for our earth. This perspective describes two alternative scenarios for improving the sustainability of future pig production systems. The first scenario is a high input-high output system based on sustainable intensification, maximizing animal protein production efficiency on a limited land surface at the same time as minimizing environmental impacts. The second scenario is a reduced input-reduced output system based on selecting animals that are more robust to climate change and are better adapted to transform low quality feed (local feeds, feedstuff co-products, food waste) into meat. However, in contrast to the first scenario, the latter scenario results in reduced predicted yields, reduced production efficiency and possibly increased costs to the consumer. National evaluation of the availability of local feed and feedstuff co-product alternatives, determination of limits to feed sourced from international markets, available land for crop and livestock production, desired production levels, and a willingness to politically enforce policies through subsidies and/or penalties are some of the considerations to combine these two scenarios. Given future novel sustainable alternatives to livestock animal protein, it may become reasonable to move towards an added general premium price on 'protein from livestock animals' to the benefit of promoting higher incomes to farmers at the same time as covering the extra costs of, politically enforced, welfare of livestock animals in sustainable production systems. © 2020 The Authors. Journal of The Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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Affiliation(s)
- Wendy M Rauw
- Departamento de Mejora Genética AnimalINIAMadridSpain
| | - Lotta Rydhmer
- Department of Animal Breeding and GeneticsSwedish University of Agricultural SciencesUppsalaSweden
| | - Ilias Kyriazakis
- Institute for Global Food Security, Queen's University, Belfast, UK
| | - Margareth Øverland
- Department of Animal and Aquacultural SciencesNorwegian University of Life SciencesÅsNorway
| | - Hélène Gilbert
- GenPhySE, Université de Toulouse, INRAECastanet TolosanFrance
| | | | - Susanne Hermesch
- Animal Genetics and Breeding Unit (a joint venture of NSW Department of PrimaryIndustries and University of New England), University of New EnglandArmidaleAustralia
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