From rumor to genetic mutation detection with explanations: a GAN approach

Generative AI in the Advancement of Viral Therapeutics for Predicting and Targeting Immune-Evasive SARS-CoV-2 Mutations

The emergence of immune-evasive mutations in the SARS-CoV-2 spike protein is consistently challenging existing vaccines and therapies, making precise prediction of their escape potential a critical imperative. Artificial Intelligence(AI) holds great promise for deciphering the intricate language of protein. Here, we employed a Generative Adversarial Network to decipher the hidden escape pathways within the spike protein by generating spikes that closely resemble natural ones. Through comprehensive analysis, we demonstrated that generated sequences capture natural escape characteristics. Moreover, incorporating these sequences into an AI-based escape prediction model significantly enhanced its performance, achieving a 7% increase in detecting natural escape mutations on the experimentally validated Greaney dataset. Similar improvements were observed on other datasets, demonstrating the model's generalizability. Precisely predicting immune-evasive spikes not only enables the design of strategically targeted therapies but also has the potential to expedite future viral therapeutics. This breakthrough carries profound implications for shaping a more resilient future against viral threats.

A Systematic Literature Review and Meta-Analysis of Studies on Online Fake News Detection

The ubiquitous access and exponential growth of information available on social media networks have facilitated the spread of fake news, complicating the task of distinguishing between this and real news. Fake news is a significant social barrier that has a profoundly negative impact on society. Despite the large number of studies on fake news detection, they have not yet been combined to offer coherent insight on trends and advancements in this domain. Hence, the primary objective of this study was to fill this knowledge gap. The method for selecting the pertinent articles for extraction was created using the preferred reporting items for systematic reviews and meta-analyses (PRISMA). This study reviewed deep learning, machine learning, and ensemble-based fake news detection methods by a meta-analysis of 125 studies to aggregate their results quantitatively. The meta-analysis primarily focused on statistics and the quantitative analysis of data from numerous separate primary investigations to identify overall trends. The results of the meta-analysis were reported by the spatial distribution, the approaches adopted, the sample size, and the performance of methods in terms of accuracy. According to the statistics of between-study variance high heterogeneity was found with τ2 = 3.441; the ratio of true heterogeneity to total observed variation was I2 = 75.27% with the heterogeneity chi-square (Q) = 501.34, the degree of freedom = 124, and p ≤ 0.001. A p-value of 0.912 from the Egger statistical test confirmed the absence of a publication bias. The findings of the meta-analysis demonstrated satisfaction with the effectiveness of the recommended approaches from the primary studies on fake news detection that were included. Furthermore, the findings can inform researchers about various approaches they can use to detect online fake news.

Topic selectivity and adaptivity promote spreading of short messages

Why is the Twitter, with its extremely length-limited messages so popular ? Our work shows that short messages focused on a single topic may have an inherent advantage in spreading through social networks, which may explain the popularity of a service featuring only short messages. We introduce a new explanatory model for information propagation through social networks that includes selectivity of message consumption depending on their content, competition for user's attention between messages and message content adaptivity through user-introduced changes. Our agent-based simulations indicate that the model displays inherent power-law distribution of number of shares for different messages and that the popular messages are very short. The adaptivity of messages increases the popularity of already popular messages, provided the users are neither too selective nor too accommodating. The distribution of message variants popularity also follows a power-law found in real information cascades. The observed behavior is robust against model parameter changes and differences of network topology.

Research on reform and breakthrough of news, film, and television media based on artificial intelligence

With the development of technology, news media and film and television media are spreading faster and faster, and at the same time, the spread of rumors is also accelerated. This article briefly describes the application of artificial intelligence in news media and film and television media using a back-propagation neural network (BPNN) algorithm to reform refutation of rumors in news media and film and television media, and compared it with K-means and support vector machine algorithms in simulation experiments. The results showed that the BPNN-based rumor recognition model had better recognition performance and shorter recognition time; it was more accurate in recognizing Weibo texts that were complete and faster in recognizing bullet screen comments that were short; the BPNN-based rumor recognition model also had the lowest false detection cost and performed stably when being used in actual Weibo platform and bullet screen video website.

Investigating the impact of emotion on temporal orientation in a deep multitask setting

Temporal orientation is an important aspect of human cognition which shows how an individual emphasizes past, present, and future. Theoretical research in psychology shows that one’s emotional state can influence his/her temporal orientation. We hypothesize that measuring human temporal orientation can benefit from concurrent learning of emotion. To test this hypothesis, we propose a deep learning-based multi-task framework where we concurrently learn a unified model for temporal orientation (our primary task) and emotion analysis (secondary task) using tweets. Our multi-task framework takes users’ tweets as input and produces three temporal orientation labels (past, present or future) and four emotion labels (joy, sadness, anger, or fear) with intensity values as outputs. The classified tweets are then grouped for each user to obtain the user-level temporal orientation and emotion. Finally, we investigate the associations between the users’ temporal orientation and their emotional state. Our analysis reveals that joy and anger are correlated to future orientation while sadness and fear are correlated to the past orientation.

Role of artificial intelligence in peptide vaccine design against RNA viruses

RNA viruses have high rate of replication and mutation that help them adapt and change according to their environmental conditions. Many viral mutants are the cause of various severe and lethal diseases. Vaccines, on the other hand have the capacity to protect us from infectious diseases by eliciting antibody or cell-mediated immune responses that are pathogen-specific. While there are a few reviews pertaining to the use of artificial intelligence (AI) for SARS-COV-2 vaccine development, none focus on peptide vaccination for RNA viruses and the important role played by AI in it. Peptide vaccine which is slowly coming to be recognized as a safe and effective vaccination strategy has the capacity to overcome the mutant escape problem which is also being currently faced by SARS-COV-2 vaccines in circulation.Here we review the present scenario of peptide vaccines which are developed using mathematical and computational statistics methods to prevent the spread of disease caused by RNA viruses. We also focus on the importance and current stage of AI and mathematical evolutionary modeling using machine learning tools in the establishment of these new peptide vaccines for the control of viral disease.

Deep learning models in detection of dietary supplement adverse event signals from Twitter

Objective

The objective of this study is to develop a deep learning pipeline to detect signals on dietary supplement-related adverse events (DS AEs) from Twitter.

Materials and Methods

We obtained 247 807 tweets ranging from 2012 to 2018 that mentioned both DS and AE. We designed a tailor-made annotation guideline for DS AEs and annotated biomedical entities and relations on 2000 tweets. For the concept extraction task, we fine-tuned and compared the performance of BioClinical-BERT, PubMedBERT, ELECTRA, RoBERTa, and DeBERTa models with a CRF classifier. For the relation extraction task, we fine-tuned and compared BERT models to BioClinical-BERT, PubMedBERT, RoBERTa, and DeBERTa models. We chose the best-performing models in each task to assemble an end-to-end deep learning pipeline to detect DS AE signals and compared the results to the known DS AEs from a DS knowledge base (ie, iDISK).

Results

DeBERTa-CRF model outperformed other models in the concept extraction task, scoring a lenient microaveraged F1 score of 0.866. RoBERTa model outperformed other models in the relation extraction task, scoring a lenient microaveraged F1 score of 0.788. The end-to-end pipeline built on these 2 models was able to extract DS indication and DS AEs with a lenient microaveraged F1 score of 0.666.

Conclusion

We have developed a deep learning pipeline that can detect DS AE signals from Twitter. We have found DS AEs that were not recorded in an existing knowledge base (iDISK) and our proposed pipeline can as sist DS AE pharmacovigilance.

Deciphering the laws of social network-transcendent COVID-19 misinformation dynamics and implications for combating misinformation phenomena

The global rise of COVID-19 health risk has triggered the related misinformation infodemic. We present the first analysis of COVID-19 misinformation networks and determine few of its implications. Firstly, we analyze the spread trends of COVID-19 misinformation and discover that the COVID-19 misinformation statistics are well fitted by a log-normal distribution. Secondly, we form misinformation networks by taking individual misinformation as a node and similarity between misinformation nodes as links, and we decipher the laws of COVID-19 misinformation network evolution: (1) We discover that misinformation evolves to optimize the network information transfer over time with the sacrifice of robustness. (2) We demonstrate the co-existence of fit get richer and rich get richer phenomena in misinformation networks. (3) We show that a misinformation network evolution with node deletion mechanism captures well the public attention shift on social media. Lastly, we present a network science inspired deep learning framework to accurately predict which Twitter posts are likely to become central nodes (i.e., high centrality) in a misinformation network from only one sentence without the need to know the whole network topology. With the network analysis and the central node prediction, we propose that if we correctly suppress certain central nodes in the misinformation network, the information transfer of network would be severely impacted.