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Thongtip A, Mosaleeyanon K, Janta S, Wanichananan P, Chutimanukul P, Thepsilvisut O, Chutimanukul P. Assessing light spectrum impact on growth and antioxidant properties of basil family microgreens. Sci Rep 2024; 14:27875. [PMID: 39538013 PMCID: PMC11561104 DOI: 10.1038/s41598-024-79529-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Accepted: 11/11/2024] [Indexed: 11/16/2024] Open
Abstract
Understanding the influence of light spectra on plant growth and antioxidant activities is crucial for optimizing cultivation practices and enhancing crop quality. In this study, we investigated the effects of different light treatments on growth parameters and antioxidant activities in five plant species: peppermint, Thai basil, cumin, lemon basil, and green holy basil. Our results revealed distinct responses to varying light spectra, with green light consistently promoting taller plant heights across all species. Additionally, blue light induced notable increases in plant width for certain species. Analysis of antioxidant activities demonstrated dynamic fluctuations in Total Phenolic Content (TPC) and Flavonoid Content (TFC) among different light treatments and plant species. While white and red light generally promoted higher TPC levels, blue light unexpectedly exhibited the highest TPC levels at specific time points. Moreover, investigation into DPPH Radical Scavenging activity revealed diverse temporal responses to light spectra, with blue light demonstrating exceptional activity at early stages and white and red light showing heightened activity at later time points. These findings underscore the importance of tailored light regimes in optimizing growth parameters and enhancing antioxidant activities in cultivated plants, thereby offering promising avenues for sustainable agriculture and food production practices.
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Affiliation(s)
- Akira Thongtip
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Pathum Thani, 12120, Thailand
| | - Kriengkrai Mosaleeyanon
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Pathum Thani, 12120, Thailand
| | - Supattana Janta
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Pathum Thani, 12120, Thailand
| | - Praderm Wanichananan
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Pathum Thani, 12120, Thailand
| | - Preuk Chutimanukul
- Department of Agricultural Technology, Faculty of Science and Technology, Thammasat University, Rangsit Center, Khlong Nueng, Khlong Luang, Pathum Thani, 12120, Thailand
| | - Ornprapa Thepsilvisut
- Department of Agricultural Technology, Faculty of Science and Technology, Thammasat University, Rangsit Center, Khlong Nueng, Khlong Luang, Pathum Thani, 12120, Thailand
| | - Panita Chutimanukul
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Pathum Thani, 12120, Thailand.
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Suratanee A, Chutimanukul P, Saelao T, Chadchawan S, Buaboocha T, Plaimas K. Phenolic content discrimination in Thai holy basil using hyperspectral data analysis and machine learning techniques. PLoS One 2024; 19:e0309132. [PMID: 39356698 PMCID: PMC11446419 DOI: 10.1371/journal.pone.0309132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2024] [Accepted: 08/05/2024] [Indexed: 10/04/2024] Open
Abstract
Hyperspectral imaging has emerged as a powerful tool for the non-destructive assessment of plant properties, including the quantification of phytochemical contents. Traditional methods for antioxidant analysis in holy basil (Ocimum tenuiflorum L.) are time-consuming, while hyperspectral imaging has the potential to rapidly observe holy basil. In this study, we employed hyperspectral imaging combined with machine learning techniques to determine the levels of total phenolic contents in Thai holy basil. Spectral data were acquired from 26 holy basil cultivars at different growth stages, and the total phenolic contents of the samples were measured. To extract the characteristics of the spectral data, we used 22 statistical features in both time and frequency domains. Relevant features were selected and combined with the corresponding total phenolic content values to develop a neural network model for classifying the phenolic content levels into 'low' and 'normal-to-high' categories. The neural network model demonstrated high performance, achieving an area under the receiver operating characteristic curve of 0.8113, highlighting its effectiveness in predicting phenolic content levels based on the spectral data. Comparative analysis with other machine learning techniques confirmed the superior performance of the neural network approach. Further investigation revealed that the model exhibited increased confidence in predicting the phenolic content levels of older holy basil samples. This study exhibits the potential of integrating hyperspectral imaging, feature extraction, and machine learning techniques for the rapid and non-destructive assessment of phenolic content levels in holy basil. The demonstrated effectiveness of this approach opens new possibilities for screening antioxidant properties in plants, facilitating efficient decision-making processes for researchers based on comprehensive spectral data.
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Affiliation(s)
- Apichat Suratanee
- Department of Mathematics, Faculty of Applied Science, King Mongkut’s University of Technology North Bangkok, Bangkok, Thailand
- Intelligent and Nonlinear Dynamic Innovations Research Center, Science and Technology Research Institute, King Mongkut’s University of Technology North Bangkok, Bangkok, Thailand
| | - Panita Chutimanukul
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Tanapon Saelao
- Program in Bioinformatics and Computational Biology, Graduate School, Chulalongkorn University, Bangkok, Thailand
| | - Supachitra Chadchawan
- Center of Excellence in Environment and Plant Physiology (CEEPP), Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
- Omics Science and Bioinformatics Center, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
| | - Teerapong Buaboocha
- Omics Science and Bioinformatics Center, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
- Center of Excellence in Molecular Crop, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
| | - Kitiporn Plaimas
- Omics Science and Bioinformatics Center, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
- Advanced Virtual and Intelligent Computing (AVIC) Center, Department of Mathematics and Computer Science, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
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Jedličková V, Štefková M, Mandáková T, Sánchez López JF, Sedláček M, Lysak MA, Robert HS. Injection-based hairy root induction and plant regeneration techniques in Brassicaceae. PLANT METHODS 2024; 20:29. [PMID: 38368430 PMCID: PMC10874044 DOI: 10.1186/s13007-024-01150-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Accepted: 01/28/2024] [Indexed: 02/19/2024]
Abstract
BACKGROUND Hairy roots constitute a valuable tissue culture system for species that are difficult to propagate through conventional seed-based methods. Moreover, the generation of transgenic plants derived from hairy roots can be facilitated by employing carefully designed hormone-containing media. RESULTS We initiated hairy root formation in the rare crucifer species Asperuginoides axillaris via an injection-based protocol using the Agrobacterium strain C58C1 harboring a hairy root-inducing (Ri) plasmid and successfully regenerated plants from established hairy root lines. Our study confirms the genetic stability of both hairy roots and their derived regenerants and highlights their utility as a permanent source of mitotic chromosomes for cytogenetic investigations. Additionally, we have developed an effective embryo rescue protocol to circumvent seed dormancy issues in A. axillaris seeds. By using inflorescence primary stems of Arabidopsis thaliana and Cardamine hirsuta as starting material, we also established hairy root lines that were subsequently used for regeneration studies. CONCLUSION We developed efficient hairy root transformation and regeneration protocols for various crucifers, namely A. axillaris, A. thaliana, and C. hirsuta. Hairy roots and derived regenerants can serve as a continuous source of plant material for molecular and cytogenetic analyses.
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Affiliation(s)
- Veronika Jedličková
- Mendel Center for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Brno, Czech Republic
| | - Marie Štefková
- Mendel Center for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Brno, Czech Republic
| | - Terezie Mandáková
- Mendel Center for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Brno, Czech Republic
- Department of Experimental Biology, Faculty of Science, Masaryk University, Brno, Czech Republic
| | - Juan Francisco Sánchez López
- Mendel Center for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Brno, Czech Republic
- National Centre for Biomolecular Research, Faculty of Science, Masaryk University, Brno, Czech Republic
| | - Marek Sedláček
- Mendel Center for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Brno, Czech Republic
| | - Martin A Lysak
- Mendel Center for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Brno, Czech Republic
- National Centre for Biomolecular Research, Faculty of Science, Masaryk University, Brno, Czech Republic
| | - Hélène S Robert
- Mendel Center for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
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Chutimanukul P, Jindamol H, Thongtip A, Korinsak S, Romyanon K, Toojinda T, Darwell CT, Wanichananan P, Panya A, Kaewsri W, Auvuchanon A, Mosaleeyanon K, Chutimanukul P. Physiological responses and variation in secondary metabolite content among Thai holy basil cultivars ( Ocimum tenuiflorum L.) grown under controlled environmental conditions in a plant factory. FRONTIERS IN PLANT SCIENCE 2022; 13:1008917. [PMID: 36340360 PMCID: PMC9634403 DOI: 10.3389/fpls.2022.1008917] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Accepted: 10/07/2022] [Indexed: 06/04/2023]
Abstract
Holy basil (Ocimum Tenuiflorum L.) is a widely used herb containing several bioactive compounds of interest for the food and pharmaceutical industries. Plant factories using artificial lighting (PFAL) is a modern agricultural system that offers opportunity to improve crop production and stabilizes productivity in many herbal plants. However, little is known about the variation among holy basil varieties that can be cultivated and provide reasonable biomass and bioactive compounds in PFAL. We therefore evaluated 10 Thai accessions and two commercial cultivars in a PFAL (with hydroponic cultivation) to categorize cultivar characteristics by investigating physiological responses and secondary metabolite variation at plant flowering stage. Among Thai varieties, net photosynthetic rate (Pn) was significantly highest in varieties OC059 and OC081. The greatest growth and biomass measures were observed in OC064. Antioxidant capacity also varied, with the greatest accumulation of total phenolic compounds (TPC), flavonoids, and antioxidant activity by DPPH assay in OC064, and highest terpenoid content in OC194. The accumulation of major compounds confirmed by showing the highest levels of eugenol in OC057, OC063, OC194, and OC195 and methyl eugenol in OC072 and OC081. The highest α-humulene content was found in OC059. PCA based on physiological responses and secondary metabolites indicate that OC064 was clearly distinguished from other cultivars/accessions. These findings demonstrate variation across holy basil accessions for physiologic responses, antioxidant capacity, and secondary compounds in PFAL. These insights lead to identification of suitable varieties which is the most important step of developing an efficient method for producing high quality raw materials of Thai holy basil for supplying the foods and pharmaceutical industries.
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Affiliation(s)
- Panita Chutimanukul
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Hathairut Jindamol
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Akira Thongtip
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Siripar Korinsak
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Kanokwan Romyanon
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Theerayut Toojinda
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Clive Terence Darwell
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Praderm Wanichananan
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Atikorn Panya
- Food Biotechnology Research Team, Functional Ingredients and Food Innovation Research Group, National Center for Genetic Engineering and Biotechnology (BIOTEC), Thailand Science Park, Pathum Thani, Thailand
| | - Wilailak Kaewsri
- Food Biotechnology Research Team, Functional Ingredients and Food Innovation Research Group, National Center for Genetic Engineering and Biotechnology (BIOTEC), Thailand Science Park, Pathum Thani, Thailand
| | - Anyamanee Auvuchanon
- Department of Horticulture, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University, Kamphaeng Saen Campus, sNakhon Pathom, Thailand
| | - Kriengkrai Mosaleeyanon
- National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Klong Luang, Thailand
| | - Preuk Chutimanukul
- Department of Agricultural Technology, Faculty of Science and Technology, Thammasat University, Rangsit Centre, Khlong Nueng, Thailand
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