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Munusamy S, Zheng H, Jahani R, Zhou S, Chen J, Kong J, Guan X. DNA-Assisted CRISPR-Cas12a Enhanced Fluorescent Assay for Protein Detection in Complicated Matrices. ACS APPLIED BIO MATERIALS 2024. [PMID: 39700063 DOI: 10.1021/acsabm.4c01600] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2024]
Abstract
Proteins are important biological macromolecules that perform a wide variety of functions in the cell and human body, and can serve as important biomarkers for early diagnosis and prognosis of human diseases as well as monitoring the effectiveness of disease treatment. Hence, sensitive and accurate detection of proteins in human biospecimens is imperative. However, at present, there is no ideal method available for the detection of proteins in clinical samples, many of which are present at ultralow (less than 1 pM) concentrations and in complicated matrices. Herein, we report an ultrasensitive and selective DNA-assisted CRISPR-Cas12a enhanced fluorescent assay (DACEA) for protein detection with detection limits reaching as low as attomolar concentrations. The high assay sensitivity was accomplished through the combined DNA barcode amplification (by using dual-functionalized AuNPs) and CRISPR analysis, while the high selectivity and high resistance to the matrix effects of our method were accomplished via the formation of protein-antibody sandwich structure and the specific recognition of Cas12a (under the guidance of crRNA) toward the designed target ssDNA. Given its ability to accurately and sensitively detect trace amounts of proteins in complicated matrices, the DACEA protein assay platform pioneered in this work has a potential application in routine protein biomarker testing.
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Affiliation(s)
- Sathishkumar Munusamy
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
| | - Haiyan Zheng
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
| | - Rana Jahani
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
| | - Shuo Zhou
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
| | - Jun Chen
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
| | - Juanhua Kong
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
| | - Xiyun Guan
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
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El-Sawaf AK, El-Dakkony SR, Mubarak MF, Nassar AA. Synergistic effect of synthesized green nanocomposite of chitosan-activated carbon thin film (ACTF)@opuntia ficus-indica shell for removal of Sn (II) and As (V) ions from aqueous solution. CELLULOSE 2024. [DOI: 10.1007/s10570-024-05930-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Accepted: 04/24/2024] [Indexed: 01/03/2025]
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Pourali P, Neuhöferová E, Dzmitruk V, Svoboda M, Stodůlková E, Flieger M, Yahyaei B, Benson V. Bioproduced Nanoparticles Deliver Multiple Cargoes via Targeted Tumor Therapy In Vivo. ACS OMEGA 2024; 9:33789-33804. [PMID: 39130536 PMCID: PMC11307291 DOI: 10.1021/acsomega.4c03277] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 07/01/2024] [Accepted: 07/10/2024] [Indexed: 08/13/2024]
Abstract
This study recognized biologically produced gold nanoparticles (AuNPs) as multiple cargo carriers with a perspective of drug delivery into specialized tumor cells in vivo. Paclitaxel (PTX), transferrin, and antimiR-135b were conjugated with AuNPs and their uptake by mouse tumor cells in an induced breast cancer model was investigated. Each of the above-mentioned molecules was conjugated to the AuNPs separately as well as simultaneously, loading efficiency of each cargo was assessed, and performance of the final product (FP) was judged. After tumor induction in BALB/c mice, sub-IC50 doses of FP as well as control AuNPs, PTX, and phosphate buffered saline were administered in vivo. Round AuNPs were prepared using Fusarium oxysporum and exhibited a size of 13 ± 1.3 nm and a zeta potential of -35.8 ± 1.3 mV. The cytotoxicity of individual conjugates and FP were tested by MTT assay in breast tumor cells 4T1 and nontumor fibroblasts NIH/3T3 cells. The conjugation of individual molecules with AuNPs was confirmed, and FP (size of 54 ± 14 nm and zeta potential of -31.9 ± 2.08 mV) showed higher 4T1-specific toxicity in vitro when compared to control conjugates. After in vivo application of the FP, transmission electron microscopy analyses proved the presence of AuNPs in the tumor cells. Hematoxylin and eosin staining of the tumor tissue revealed that the FP group exhibited the highest amounts of inflammatory, necrotic, and apoptotic cells in contrast to the control groups. Finally, qPCR results showed that FP could transfect and suppress miR-135b expression in vivo, confirming the tumor-targeting properties of FP. The capacity of biologically produced gold nanoparticles to conjugate with multiple decorative molecules while retaining their stability and effective intracellular uptake makes them a promising alternative strategy superior to current drug carriers.
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Affiliation(s)
- Parastoo Pourali
- Institute
of Microbiology, Czech Academy of Sciences, Praha 142 20, Czech Republic
| | - Eva Neuhöferová
- Institute
of Microbiology, Czech Academy of Sciences, Praha 142 20, Czech Republic
| | - Volha Dzmitruk
- Center
of Molecular Structure, Institute of Biotechnology,
Czech Academy of Sciences, Vestec 252 20, Czech Republic
| | - Milan Svoboda
- Institute
of Analytical Chemistry, Czech Academy of
Sciences, Brno 602 00, Czech Republic
| | - Eva Stodůlková
- Institute
of Microbiology, Czech Academy of Sciences, Praha 142 20, Czech Republic
| | - Miroslav Flieger
- Institute
of Microbiology, Czech Academy of Sciences, Praha 142 20, Czech Republic
| | - Behrooz Yahyaei
- Department
of Medical Sciences, Shahrood Branch, Islamic
Azad University, Shahrood 9WVM+5HC, Iran
- Department
of Medical Sciences, Biological Nanoparticles in Medicine Research
Center, Shahrood Branch, Islamic Azad University, Shahrood 9WVM+5HC, Iran
| | - Veronika Benson
- Institute
of Microbiology, Czech Academy of Sciences, Praha 142 20, Czech Republic
- Faculty of
Health Studies, Technical University of
Liberec, Liberec 46001, Czech Republic
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Pourali P, Svoboda M, Neuhöferová E, Dzmitruk V, Benson V. Accumulation and toxicity of biologically produced gold nanoparticles in different types of specialized mammalian cells. Biotechnol Appl Biochem 2024; 71:766-778. [PMID: 38480514 DOI: 10.1002/bab.2575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Accepted: 02/17/2024] [Indexed: 08/09/2024]
Abstract
The biologically produced gold nanoparticles (AuNPs) are novel carriers with promising use in targeted tumor therapy. Still, there are no studies regarding the efficacy of nanoparticle internalization by cancer and noncancer cells. In this study, AuNPs were produced by Fusarium oxysporum and analyzed by spectrophotometry, transmission electron microscopy (TEM), energy dispersive x-ray spectroscopy (EDS), and Zetasizer. Obtained AuNPs were about 15 nm in size with a zeta potential of -35.8 mV. The AuNPs were added to cancer cells (4T1), noncancer cells (NIH/3T3), and macrophages (RAW264.7). The viability decreased in 4T1 (77 ± 3.74%) in contrast to NIH/3T3 and RAW264.7 cells (89 ± 4.9% and 90 ± 3.5%, respectively). The 4T1 cancer cells also showed the highest uptake and accumulation of Au (∼80% of AuNPs was internalized) as determined by graphite furnace atomic absorption spectroscopy. The lowest amount of AuNPs was internalized by the NIH/3T3 cells (∼30%). The NIH/3T3 cells exhibited prominent reorganization of F-actin filaments as examined by confocal microscopy. In RAW264.7, we analyzed the release of proinflammatory cytokines by flow cytometry and we found the AuNP interaction triggered transient secretion of tumor necrosis factor alpha (TNF-α) and interferon gamma (IFN-γ). In summary, we proved the biologically produced AuNPs entered all the tested cell types and triggered cell-specific responses. High AuNP uptake by tumor cells was related to decreased cell viability, while low nanoparticle uptake by fibroblasts triggered F-actin reorganization without remarkable toxicity. Thus, the biologically produced AuNPs hold promising potential as cancer drug carriers and likely require proper surface functionalization to shield phagocytizing cells.
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Affiliation(s)
- Parastoo Pourali
- Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic
| | - Milan Svoboda
- Institute of Analytical Chemistry, Czech Academy of Sciences, Brno, Czech Republic
| | - Eva Neuhöferová
- Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic
| | - Volha Dzmitruk
- Center of Molecular Structure, Institute of Biotechnology, Czech Academy of Sciences, Vestec, Czech Republic
| | - Veronika Benson
- Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic
- Faculty of Health Studies, Technical University of Liberec, Liberec, Czech Republic
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Arjunan N, Thiruvengadam V, Sushil SN. Nanoparticle-mediated dsRNA delivery for precision insect pest control: a comprehensive review. Mol Biol Rep 2024; 51:355. [PMID: 38400844 DOI: 10.1007/s11033-023-09187-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 12/19/2023] [Indexed: 02/26/2024]
Abstract
Nanoparticle-based delivery systems have emerged as powerful tools in the field of pest management, offering precise and effective means of delivering double-stranded RNA (dsRNA), a potent agent for pest control through RNA interference (RNAi). This comprehensive review aims to evaluate and compare various types of nanoparticles for their suitability in dsRNA delivery for pest management applications. The review begins by examining the unique properties and advantages of different nanoparticle materials, including clay, chitosan, liposomes, carbon, gold and silica. Each material's ability to protect dsRNA from degradation and its potential for targeted delivery to pests are assessed. Furthermore, this review delves into the surface modification strategies employed to enhance dsRNA delivery efficiency. Functionalization with oligonucleotides, lipids, polymers, proteins and peptides is discussed in detail, highlighting their role in improving stability, cellular uptake, and specificity of dsRNA delivery.This review also provides valuable guidance on choosing the most suitable nanoparticle-based system for delivering dsRNA effectively and sustainably in pest management. Moreover, it identifies existing knowledge gaps and proposes potential research directions aimed at enhancing pest control strategies through the utilization of nanoparticles and dsRNA.
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Affiliation(s)
- Nareshkumar Arjunan
- Division of Molecular Entomology, Department of Zoology, School of Life Sciences, Periyar University, Salem, 636011, India.
| | - Venkatesan Thiruvengadam
- Division of Genomic Resources, ICAR-National Bureau of Agricultural Insect Resources, H.A. Farm Post, Hebbal, P.B. No. 2491, Bangalore, 560024, India.
| | - S N Sushil
- Division of Genomic Resources, ICAR-National Bureau of Agricultural Insect Resources, H.A. Farm Post, Hebbal, P.B. No. 2491, Bangalore, 560024, India
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