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Antonelli G, Filippi J, D'Orazio M, Curci G, Casti P, Mencattini A, Martinelli E. Integrating machine learning and biosensors in microfluidic devices: A review. Biosens Bioelectron 2024; 263:116632. [PMID: 39116628 DOI: 10.1016/j.bios.2024.116632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2024] [Revised: 08/01/2024] [Accepted: 08/02/2024] [Indexed: 08/10/2024]
Abstract
Microfluidic devices are increasingly widespread in the literature, being applied to numerous exciting applications, from chemical research to Point-of-Care devices, passing through drug development and clinical scenarios. Setting up these microenvironments, however, introduces the necessity of locally controlling the variables involved in the phenomena under investigation. For this reason, the literature has deeply explored the possibility of introducing sensing elements to investigate the physical quantities and the biochemical concentration inside microfluidic devices. Biosensors, particularly, are well known for their high accuracy, selectivity, and responsiveness. However, their signals could be challenging to interpret and must be carefully analysed to carry out the correct information. In addition, proper data analysis has been demonstrated even to increase biosensors' mentioned qualities. To this regard, machine learning algorithms are undoubtedly among the most suitable approaches to undertake this job, automatically learning from data and highlighting biosensor signals' characteristics at best. Interestingly, it was also demonstrated to benefit microfluidic devices themselves, in a new paradigm that the literature is starting to name "intelligent microfluidics", ideally closing this benefic interaction among these disciplines. This review aims to demonstrate the advantages of the triad paradigm microfluidics-biosensors-machine learning, which is still little used but has a great perspective. After briefly describing the single entities, the different sections will demonstrate the benefits of the dual interactions, highlighting the applications where the reviewed triad paradigm was employed.
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Affiliation(s)
- Gianni Antonelli
- Department of Electronic Engineering & Interdisciplinary Center for Advanced Studies on Lab-on-Chip and Organ-on-Chip Applications (ICLOC), University of Rome Tor Vergata, Via del Politecnico, 1, 00133, Rome, Italy
| | - Joanna Filippi
- Department of Electronic Engineering & Interdisciplinary Center for Advanced Studies on Lab-on-Chip and Organ-on-Chip Applications (ICLOC), University of Rome Tor Vergata, Via del Politecnico, 1, 00133, Rome, Italy
| | - Michele D'Orazio
- Department of Electronic Engineering & Interdisciplinary Center for Advanced Studies on Lab-on-Chip and Organ-on-Chip Applications (ICLOC), University of Rome Tor Vergata, Via del Politecnico, 1, 00133, Rome, Italy
| | - Giorgia Curci
- Department of Electronic Engineering & Interdisciplinary Center for Advanced Studies on Lab-on-Chip and Organ-on-Chip Applications (ICLOC), University of Rome Tor Vergata, Via del Politecnico, 1, 00133, Rome, Italy
| | - Paola Casti
- Department of Electronic Engineering & Interdisciplinary Center for Advanced Studies on Lab-on-Chip and Organ-on-Chip Applications (ICLOC), University of Rome Tor Vergata, Via del Politecnico, 1, 00133, Rome, Italy
| | - Arianna Mencattini
- Department of Electronic Engineering & Interdisciplinary Center for Advanced Studies on Lab-on-Chip and Organ-on-Chip Applications (ICLOC), University of Rome Tor Vergata, Via del Politecnico, 1, 00133, Rome, Italy
| | - Eugenio Martinelli
- Department of Electronic Engineering & Interdisciplinary Center for Advanced Studies on Lab-on-Chip and Organ-on-Chip Applications (ICLOC), University of Rome Tor Vergata, Via del Politecnico, 1, 00133, Rome, Italy.
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Yang Z, Shi A, Zhang R, Ji Z, Li J, Lyu J, Qian J, Chen T, Wang X, You F, Xie J. When Metal Nanoclusters Meet Smart Synthesis. ACS NANO 2024; 18:27138-27166. [PMID: 39316700 DOI: 10.1021/acsnano.4c09597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/26/2024]
Abstract
Atomically precise metal nanoclusters (MNCs) represent a fascinating class of ultrasmall nanoparticles with molecule-like properties, bridging conventional metal-ligand complexes and nanocrystals. Despite their potential for various applications, synthesis challenges such as a precise understanding of varied synthetic parameters and property-driven synthesis persist, hindering their full exploitation and wider application. Incorporating smart synthesis methodologies, including a closed-loop framework of automation, data interpretation, and feedback from AI, offers promising solutions to address these challenges. In this perspective, we summarize the closed-loop smart synthesis that has been demonstrated in various nanomaterials and explore the research frontiers of smart synthesis for MNCs. Moreover, the perspectives on the inherent challenges and opportunities of smart synthesis for MNCs are discussed, aiming to provide insights and directions for future advancements in this emerging field of AI for Science, while the integration of deep learning algorithms stands to substantially enrich research in smart synthesis by offering enhanced predictive capabilities, optimization strategies, and control mechanisms, thereby extending the potential of MNC synthesis.
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Affiliation(s)
- Zhucheng Yang
- Joint School of National University of Singapore and Tianjin University, International Campus of Tianjin University, Fuzhou 350207, P. R. China
- Department of Chemical and Biomolecular Engineering, National University of Singapore, Singapore 117585, Singapore
| | - Anye Shi
- Systems Engineering, College of Engineering, Cornell University, Ithaca, New York 14583, United States
| | - Ruixuan Zhang
- Joint School of National University of Singapore and Tianjin University, International Campus of Tianjin University, Fuzhou 350207, P. R. China
- Department of Chemical and Biomolecular Engineering, National University of Singapore, Singapore 117585, Singapore
| | - Zuowei Ji
- School of Humanities and Social Sciences, The Chinese University of Hong Kong, Shenzhen, Shenzhen 518172, P. R. China
| | - Jiali Li
- Department of Chemistry, National University of Singapore, Singapore 117543, Singapore
| | - Jingkuan Lyu
- Joint School of National University of Singapore and Tianjin University, International Campus of Tianjin University, Fuzhou 350207, P. R. China
- Department of Chemical and Biomolecular Engineering, National University of Singapore, Singapore 117585, Singapore
| | - Jing Qian
- Joint School of National University of Singapore and Tianjin University, International Campus of Tianjin University, Fuzhou 350207, P. R. China
- Department of Chemical and Biomolecular Engineering, National University of Singapore, Singapore 117585, Singapore
| | - Tiankai Chen
- School of Science and Engineering, The Chinese University of Hong Kong, Shenzhen, Shenzhen 518172, P. R. China
| | - Xiaonan Wang
- Department of Chemical Engineering, Tsinghua University, Beijing 100084, P. R. China
| | - Fengqi You
- Systems Engineering, College of Engineering, Cornell University, Ithaca, New York 14583, United States
- Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, New York 14853, United States
- Cornell University AI for Science Institute (CUAISci), Cornell University, Ithaca, New York 14853, United States
| | - Jianping Xie
- Joint School of National University of Singapore and Tianjin University, International Campus of Tianjin University, Fuzhou 350207, P. R. China
- Department of Chemical and Biomolecular Engineering, National University of Singapore, Singapore 117585, Singapore
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Sato T, Masuda K, Sano C, Matsumoto K, Numata H, Munetoh S, Kasama T, Miyake R. Democratizing Microreactor Technology for Accelerated Discoveries in Chemistry and Materials Research. MICROMACHINES 2024; 15:1064. [PMID: 39337724 PMCID: PMC11434323 DOI: 10.3390/mi15091064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2024] [Revised: 08/11/2024] [Accepted: 08/14/2024] [Indexed: 09/30/2024]
Abstract
Microreactor technologies have emerged as versatile platforms with the potential to revolutionize chemistry and materials research, offering sustainable solutions to global challenges in environmental and health domains. This survey paper provides an in-depth review of recent advancements in microreactor technologies, focusing on their role in facilitating accelerated discoveries in chemistry and materials. Specifically, we examine the convergence of microfluidics with machine intelligence and automation, enabling the exploitation of the cyber-physical environment as a highly integrated experimentation platform for rapid scientific discovery and process development. We investigate the applicability and limitations of microreactor-enabled discovery accelerators in various chemistry and materials contexts. Despite their tremendous potential, the integration of machine intelligence and automation into microreactor-based experiments presents challenges in establishing fully integrated, automated, and intelligent systems. These challenges can hinder the broader adoption of microreactor technologies within the research community. To address this, we review emerging technologies that can help lower barriers and facilitate the implementation of microreactor-enabled discovery accelerators. Lastly, we provide our perspective on future research directions for democratizing microreactor technologies, with the aim of accelerating scientific discoveries and promoting widespread adoption of these transformative platforms.
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Affiliation(s)
- Tomomi Sato
- Graduate School of Engineering, The University of Tokyo, Kawasaki 212-0032, Japan; (T.K.); (R.M.)
| | - Koji Masuda
- Department of Physics and Astronomy, University of Exeter, Exeter EX4 4QL, UK;
| | - Chikako Sano
- IBM Semiconductors, IBM Research–Tokyo, Kawasaki 212-0032, Japan; (C.S.); (K.M.); (H.N.); (S.M.)
| | - Keiji Matsumoto
- IBM Semiconductors, IBM Research–Tokyo, Kawasaki 212-0032, Japan; (C.S.); (K.M.); (H.N.); (S.M.)
| | - Hidetoshi Numata
- IBM Semiconductors, IBM Research–Tokyo, Kawasaki 212-0032, Japan; (C.S.); (K.M.); (H.N.); (S.M.)
| | - Seiji Munetoh
- IBM Semiconductors, IBM Research–Tokyo, Kawasaki 212-0032, Japan; (C.S.); (K.M.); (H.N.); (S.M.)
| | - Toshihiro Kasama
- Graduate School of Engineering, The University of Tokyo, Kawasaki 212-0032, Japan; (T.K.); (R.M.)
| | - Ryo Miyake
- Graduate School of Engineering, The University of Tokyo, Kawasaki 212-0032, Japan; (T.K.); (R.M.)
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4
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Qi X, Zhou Q, Li X, Hu G. Generation of Multiple Concentration Gradients Using a Two-Dimensional Pyramid Array. Anal Chem 2024; 96:856-865. [PMID: 38104274 DOI: 10.1021/acs.analchem.3c04496] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
Concentration heterogeneity of diffusible reactants is a prevalent phenomenon in biochemical processes, requiring the generation of concentration gradients for the relevant experiments. In this study, we present a high-density pyramid array microfluidic network for the effective and precise generation of multiple concentration gradients. The complex gradient distribution in the 2D array can be adaptively adjusted by modulating the reactant velocities and concentrations at the inlets. In addition, the unique design of each reaction chamber and mixing block in the array ensures uniform concentrations within each chamber during dynamic changes, enabling large-scale reactions with low reactant volumes. Through detailed numerical simulation of mass transport within the complex microchannel networks, the proposed method allows researchers to determine the desired number of reaction chambers within a given concentration range based on experimental requirements and to quickly obtain the operating conditions with the help of machine learning-based prediction. The effectiveness in generating a multiple concentration gradient environment was further demonstrated by concentration-dependent calcium carbonate crystallization experiments. This device provides a highly efficient mixing and adaptable concentration platform that is well suited for high-throughput and multiplexed reactions.
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Affiliation(s)
- Xinlei Qi
- Department of Engineering Mechanics, State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, Hangzhou 310027, China
| | - Qin Zhou
- Department of Engineering Mechanics, State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, Hangzhou 310027, China
| | - Xuejin Li
- Department of Engineering Mechanics, State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, Hangzhou 310027, China
| | - Guoqing Hu
- Department of Engineering Mechanics, State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, Hangzhou 310027, China
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Tan JD, Ramalingam B, Wong SL, Cheng JJW, Lim YF, Chellappan V, Khan SA, Kumar J, Hippalgaonkar K. Transfer Learning of Full Molecular Weight Distributions via High-Throughput Computer-Controlled Polymerization. J Chem Inf Model 2023; 63:4560-4573. [PMID: 37432764 DOI: 10.1021/acs.jcim.3c00504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/12/2023]
Abstract
The skew and shape of the molecular weight distribution (MWD) of polymers have a significant impact on polymer physical properties. Standard summary metrics statistically derived from the MWD only provide an incomplete picture of the polymer MWD. Machine learning (ML) methods coupled with high-throughput experimentation (HTE) could potentially allow for the prediction of the entire polymer MWD without information loss. In our work, we demonstrate a computer-controlled HTE platform that is able to run up to 8 unique variable conditions in parallel for the free radical polymerization of styrene. The segmented-flow HTE system was equipped with an inline Raman spectrometer and offline size exclusion chromatography (SEC) to obtain time-dependent conversion and MWD, respectively. Using ML forward models, we first predict monomer conversion, intrinsically learning varying polymerization kinetics that change for each experimental condition. In addition, we predict entire MWDs including the skew and shape as well as SHAP analysis to interpret the dependence on reagent concentrations and reaction time. We then used a transfer learning approach to use the data from our high-throughput flow reactor to predict batch polymerization MWDs with only three additional data points. Overall, we demonstrate that the combination of HTE and ML provides a high level of predictive accuracy in determining polymerization outcomes. Transfer learning can allow exploration outside existing parameter spaces efficiently, providing polymer chemists with the ability to target the synthesis of polymers with desired properties.
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Affiliation(s)
- Jin Da Tan
- Institute of Materials Research & Engineering, Agency for Science Technology and Research, 2 Fusionopolis Way, 138634 Singapore, Singapore
- National University of Singapore Graduate School - Integrative Sciences and Engineering Programme, 21 Lower Kent Ridge Road, Singapore 119077, Singapore
| | - Balamurugan Ramalingam
- Institute of Materials Research & Engineering, Agency for Science Technology and Research, 2 Fusionopolis Way, 138634 Singapore, Singapore
- Institute of Sustainability for Chemicals, Energy and Environment, Agency for Science Technology and Research, 8 Biomedical Grove, Singapore 138665, Singapore
| | - Swee Liang Wong
- Institute of Materials Research & Engineering, Agency for Science Technology and Research, 2 Fusionopolis Way, 138634 Singapore, Singapore
- Home Team Science and Technology Agency, Singapore 138507, Singapore
| | - Jayce Jian Wei Cheng
- Institute of Materials Research & Engineering, Agency for Science Technology and Research, 2 Fusionopolis Way, 138634 Singapore, Singapore
| | - Yee-Fun Lim
- Institute of Materials Research & Engineering, Agency for Science Technology and Research, 2 Fusionopolis Way, 138634 Singapore, Singapore
- Institute of Sustainability for Chemicals, Energy and Environment, Agency for Science Technology and Research, 8 Biomedical Grove, Singapore 138665, Singapore
| | - Vijila Chellappan
- Institute of Materials Research & Engineering, Agency for Science Technology and Research, 2 Fusionopolis Way, 138634 Singapore, Singapore
| | - Saif A Khan
- National University of Singapore Graduate School - Integrative Sciences and Engineering Programme, 21 Lower Kent Ridge Road, Singapore 119077, Singapore
- Department of Chemical and Biomolecular Engineering - National University of Singapore, 4 Engineering Drive 4, Singapore 117585, Singapore
| | - Jatin Kumar
- Institute of Materials Research & Engineering, Agency for Science Technology and Research, 2 Fusionopolis Way, 138634 Singapore, Singapore
- Xinterra Pte. Ltd., 77 Robinson Road, Singapore 068896, Singapore
| | - Kedar Hippalgaonkar
- Institute of Materials Research & Engineering, Agency for Science Technology and Research, 2 Fusionopolis Way, 138634 Singapore, Singapore
- Department of Materials Science and Engineering, Nanyang Technological University, Singapore 639798, Singapore
- Institute of Functional Intelligent Materials - National University of Singapore, 4 Science Drive 2, Singapore 117544, Singapore
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McDonald SM, Augustine EK, Lanners Q, Rudin C, Catherine Brinson L, Becker ML. Applied machine learning as a driver for polymeric biomaterials design. Nat Commun 2023; 14:4838. [PMID: 37563117 PMCID: PMC10415291 DOI: 10.1038/s41467-023-40459-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 07/24/2023] [Indexed: 08/12/2023] Open
Abstract
Polymers are ubiquitous to almost every aspect of modern society and their use in medical products is similarly pervasive. Despite this, the diversity in commercial polymers used in medicine is stunningly low. Considerable time and resources have been extended over the years towards the development of new polymeric biomaterials which address unmet needs left by the current generation of medical-grade polymers. Machine learning (ML) presents an unprecedented opportunity in this field to bypass the need for trial-and-error synthesis, thus reducing the time and resources invested into new discoveries critical for advancing medical treatments. Current efforts pioneering applied ML in polymer design have employed combinatorial and high throughput experimental design to address data availability concerns. However, the lack of available and standardized characterization of parameters relevant to medicine, including degradation time and biocompatibility, represents a nearly insurmountable obstacle to ML-aided design of biomaterials. Herein, we identify a gap at the intersection of applied ML and biomedical polymer design, highlight current works at this junction more broadly and provide an outlook on challenges and future directions.
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Affiliation(s)
| | - Emily K Augustine
- Thomas Lord Department of Mechanical Engineering and Materials Science, Duke University, Durham, NC, USA
| | - Quinn Lanners
- Department of Biostatistics and Bioinformatics, Duke University, Durham, NC, USA
| | - Cynthia Rudin
- Department of Biostatistics and Bioinformatics, Duke University, Durham, NC, USA
| | - L Catherine Brinson
- Thomas Lord Department of Mechanical Engineering and Materials Science, Duke University, Durham, NC, USA
| | - Matthew L Becker
- Department of Chemistry, Duke University, Durham, NC, USA.
- Thomas Lord Department of Mechanical Engineering and Materials Science, Duke University, Durham, NC, USA.
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Tsai HF, Podder S, Chen PY. Microsystem Advances through Integration with Artificial Intelligence. MICROMACHINES 2023; 14:826. [PMID: 37421059 PMCID: PMC10141994 DOI: 10.3390/mi14040826] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Revised: 04/04/2023] [Accepted: 04/06/2023] [Indexed: 07/09/2023]
Abstract
Microfluidics is a rapidly growing discipline that involves studying and manipulating fluids at reduced length scale and volume, typically on the scale of micro- or nanoliters. Under the reduced length scale and larger surface-to-volume ratio, advantages of low reagent consumption, faster reaction kinetics, and more compact systems are evident in microfluidics. However, miniaturization of microfluidic chips and systems introduces challenges of stricter tolerances in designing and controlling them for interdisciplinary applications. Recent advances in artificial intelligence (AI) have brought innovation to microfluidics from design, simulation, automation, and optimization to bioanalysis and data analytics. In microfluidics, the Navier-Stokes equations, which are partial differential equations describing viscous fluid motion that in complete form are known to not have a general analytical solution, can be simplified and have fair performance through numerical approximation due to low inertia and laminar flow. Approximation using neural networks trained by rules of physical knowledge introduces a new possibility to predict the physicochemical nature. The combination of microfluidics and automation can produce large amounts of data, where features and patterns that are difficult to discern by a human can be extracted by machine learning. Therefore, integration with AI introduces the potential to revolutionize the microfluidic workflow by enabling the precision control and automation of data analysis. Deployment of smart microfluidics may be tremendously beneficial in various applications in the future, including high-throughput drug discovery, rapid point-of-care-testing (POCT), and personalized medicine. In this review, we summarize key microfluidic advances integrated with AI and discuss the outlook and possibilities of combining AI and microfluidics.
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Affiliation(s)
- Hsieh-Fu Tsai
- Department of Biomedical Engineering, Chang Gung University, Taoyuan City 333, Taiwan;
- Department of Neurosurgery, Chang Gung Memorial Hospital, Keelung, Keelung City 204, Taiwan
- Center for Biomedical Engineering, Chang Gung University, Taoyuan City 333, Taiwan
| | - Soumyajit Podder
- Department of Biomedical Engineering, Chang Gung University, Taoyuan City 333, Taiwan;
| | - Pin-Yuan Chen
- Department of Biomedical Engineering, Chang Gung University, Taoyuan City 333, Taiwan;
- Department of Neurosurgery, Chang Gung Memorial Hospital, Keelung, Keelung City 204, Taiwan
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Dedeloudi A, Weaver E, Lamprou DA. Machine learning in additive manufacturing & Microfluidics for smarter and safer drug delivery systems. Int J Pharm 2023; 636:122818. [PMID: 36907280 DOI: 10.1016/j.ijpharm.2023.122818] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Revised: 02/23/2023] [Accepted: 03/06/2023] [Indexed: 03/13/2023]
Abstract
A new technological passage has emerged in the pharmaceutical field, concerning the management, application, and transfer of knowledge from humans to machines, as well as the implementation of advanced manufacturing and product optimisation processes. Machine Learning (ML) methods have been introduced to Additive Manufacturing (AM) and Microfluidics (MFs) to predict and generate learning patterns for precise fabrication of tailor-made pharmaceutical treatments. Moreover, regarding the diversity and complexity of personalised medicine, ML has been part of quality by design strategy, targeting towards the development of safe and effective drug delivery systems. The utilisation of different and novel ML techniques along with Internet of Things sensors in AM and MFs, have shown promising aspects regarding the development of well-defined automated procedures towards the production of sustainable and quality-based therapeutic systems. Thus, the effective data utilisation, prospects on a flexible and broader production of "on demand" treatments. In this study, a thorough overview has been achieved, concerning scientific achievements of the past decade, which aims to trigger the research interest on incorporating different types of ML in AM and MFs, as essential techniques for the enhancement of quality standards of customised medicinal applications, as well as the reduction of variability potency, throughout a pharmaceutical process.
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Affiliation(s)
- Aikaterini Dedeloudi
- School of Pharmacy, Queen's University Belfast, 97 Lisburn Road, Belfast BT9 7BL, UK
| | - Edward Weaver
- School of Pharmacy, Queen's University Belfast, 97 Lisburn Road, Belfast BT9 7BL, UK
| | - Dimitrios A Lamprou
- School of Pharmacy, Queen's University Belfast, 97 Lisburn Road, Belfast BT9 7BL, UK.
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9
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Siu DMD, Lee KCM, Chung BMF, Wong JSJ, Zheng G, Tsia KK. Optofluidic imaging meets deep learning: from merging to emerging. LAB ON A CHIP 2023; 23:1011-1033. [PMID: 36601812 DOI: 10.1039/d2lc00813k] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
Propelled by the striking advances in optical microscopy and deep learning (DL), the role of imaging in lab-on-a-chip has dramatically been transformed from a silo inspection tool to a quantitative "smart" engine. A suite of advanced optical microscopes now enables imaging over a range of spatial scales (from molecules to organisms) and temporal window (from microseconds to hours). On the other hand, the staggering diversity of DL algorithms has revolutionized image processing and analysis at the scale and complexity that were once inconceivable. Recognizing these exciting but overwhelming developments, we provide a timely review of their latest trends in the context of lab-on-a-chip imaging, or coined optofluidic imaging. More importantly, here we discuss the strengths and caveats of how to adopt, reinvent, and integrate these imaging techniques and DL algorithms in order to tailor different lab-on-a-chip applications. In particular, we highlight three areas where the latest advances in lab-on-a-chip imaging and DL can form unique synergisms: image formation, image analytics and intelligent image-guided autonomous lab-on-a-chip. Despite the on-going challenges, we anticipate that they will represent the next frontiers in lab-on-a-chip imaging that will spearhead new capabilities in advancing analytical chemistry research, accelerating biological discovery, and empowering new intelligent clinical applications.
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Affiliation(s)
- Dickson M D Siu
- Department of Electrical and Electronic Engineering, The University of Hong Kong, Hong Kong, Hong Kong.
| | - Kelvin C M Lee
- Department of Electrical and Electronic Engineering, The University of Hong Kong, Hong Kong, Hong Kong.
| | - Bob M F Chung
- Advanced Biomedical Instrumentation Centre, Hong Kong Science Park, Shatin, New Territories, Hong Kong
| | - Justin S J Wong
- Conzeb Limited, Hong Kong Science Park, Shatin, New Territories, Hong Kong
| | - Guoan Zheng
- Department of Biomedical Engineering, University of Connecticut, Storrs, CT, USA
| | - Kevin K Tsia
- Department of Electrical and Electronic Engineering, The University of Hong Kong, Hong Kong, Hong Kong.
- Advanced Biomedical Instrumentation Centre, Hong Kong Science Park, Shatin, New Territories, Hong Kong
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10
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McIntyre D, Lashkaripour A, Fordyce P, Densmore D. Machine learning for microfluidic design and control. LAB ON A CHIP 2022; 22:2925-2937. [PMID: 35904162 PMCID: PMC9361804 DOI: 10.1039/d2lc00254j] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2022] [Accepted: 06/28/2022] [Indexed: 05/24/2023]
Abstract
Microfluidics has developed into a mature field with applications across science and engineering, having particular commercial success in molecular diagnostics, next-generation sequencing, and bench-top analysis. Despite its ubiquity, the complexity of designing and controlling custom microfluidic devices present major barriers to adoption, requiring intuitive knowledge gained from years of experience. If these barriers were overcome, microfluidics could miniaturize biological and chemical research for non-experts through fully-automated platform development and operation. The intuition of microfluidic experts can be captured through machine learning, where complex statistical models are trained for pattern recognition and subsequently used for event prediction. Integration of machine learning with microfluidics could significantly expand its adoption and impact. Here, we present the current state of machine learning for the design and control of microfluidic devices, its possible applications, and current limitations.
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Affiliation(s)
- David McIntyre
- Biomedical Engineering Department, Boston University, MA, USA
- Biological Design Center, Boston University, Boston, MA, USA.
| | - Ali Lashkaripour
- Department of Bioengineering, Stanford University, Stanford, CA, USA
- Department of Genetics, Stanford University, Stanford, CA, USA
| | - Polly Fordyce
- Department of Bioengineering, Stanford University, Stanford, CA, USA
- Department of Genetics, Stanford University, Stanford, CA, USA
- Chan-Zuckerberg Biohub, San Francisco, CA, USA
| | - Douglas Densmore
- Biological Design Center, Boston University, Boston, MA, USA.
- Electrical & Computer Engineering Department, Boston University, Boston, MA, USA
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11
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Zhu LT, Chen XZ, Ouyang B, Yan WC, Lei H, Chen Z, Luo ZH. Review of Machine Learning for Hydrodynamics, Transport, and Reactions in Multiphase Flows and Reactors. Ind Eng Chem Res 2022. [DOI: 10.1021/acs.iecr.2c01036] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Li-Tao Zhu
- Department of Chemical Engineering, School of Chemistry and Chemical Engineering, State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Xi-Zhong Chen
- Department of Chemical and Biological Engineering, University of Sheffield, Sheffield, S1 3JD, U.K
| | - Bo Ouyang
- Department of Chemical Engineering, School of Chemistry and Chemical Engineering, State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Wei-Cheng Yan
- School of Chemistry and Chemical Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China
| | - He Lei
- Department of Chemical Engineering, School of Chemistry and Chemical Engineering, State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Zhe Chen
- Department of Chemical Engineering, School of Chemistry and Chemical Engineering, State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
| | - Zheng-Hong Luo
- Department of Chemical Engineering, School of Chemistry and Chemical Engineering, State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai, 200240, P. R. China
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12
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Bennett JA, Abolhasani M. Autonomous chemical science and engineering enabled by self-driving laboratories. Curr Opin Chem Eng 2022. [DOI: 10.1016/j.coche.2022.100831] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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13
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MacQueen B, Jayarathna R, Lauterbach J. Knowledge extraction in catalysis utilizing design of experiments and machine learning. Curr Opin Chem Eng 2022. [DOI: 10.1016/j.coche.2021.100781] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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14
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Precision Polymer Synthesis by Controlled Radical Polymerization: Fusing the progress from Polymer Chemistry and Reaction Engineering. Prog Polym Sci 2022. [DOI: 10.1016/j.progpolymsci.2022.101555] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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15
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Abe T, Oh-hara S, Ukita Y. Integration of reinforcement learning to realize functional variability of microfluidic systems. BIOMICROFLUIDICS 2022; 16:024106. [PMID: 35356131 PMCID: PMC8934189 DOI: 10.1063/5.0087079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Accepted: 03/04/2022] [Indexed: 05/12/2023]
Abstract
In this article, we present a proof-of-concept for microfluidic systems with high functional variability using reinforcement learning. By mathematically defining the objective of tasks, we demonstrate that the system can autonomously learn to behave according to its objectives. We applied Q-learning to a peristaltic micropump and showed that two different tasks can be performed on the same platform: adjusting the flow rate of the pump and manipulating the position of the particles. First, we performed typical micropumping with flow rate control. In this task, the system is rewarded according to the deviation between the average flow rate generated by the micropump and the target value. Therefore, the objective of the system is to maintain the target flow rate via an operation of the pump. Next, we demonstrate the micromanipulation of a small object (microbead) on the same platform. The objective was to manipulate the microbead position to the target area, and the system was rewarded for the success of the task. These results confirmed that the system learned to control the flow rate and manipulate the microbead to any randomly chosen target position. In particular, the manipulation technique is a new technology that does not require the use of structures such as wells or weirs. Therefore, this concept not only adds flexibility to the system but also contributes to the development of novel control methods to realize highly versatile microfluidic systems.
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Affiliation(s)
- Takaaki Abe
- Department of Engineering, Integrated Graduate School of Medicine, Engineering, and Agricultural Sciences, University of Yamanashi, 4-3-11 Takeda, Kofu 400-8510, Japan
| | - Shinsuke Oh-hara
- Graduate Faculty of Interdisciplinary Research, University of Yamanashi, 4-3-11 Takeda, Kofu 400-8510, Japan
| | - Yoshiaki Ukita
- Graduate Faculty of Interdisciplinary Research, University of Yamanashi, 4-3-11 Takeda, Kofu 400-8510, Japan
- Author to whom correspondence should be addressed:
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16
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Fan YV, Jiang P, Tan RR, Aviso KB, You F, Zhao X, Lee CT, Klemeš JJ. Forecasting plastic waste generation and interventions for environmental hazard mitigation. JOURNAL OF HAZARDOUS MATERIALS 2022; 424:127330. [PMID: 34600379 DOI: 10.1016/j.jhazmat.2021.127330] [Citation(s) in RCA: 27] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2021] [Revised: 09/19/2021] [Accepted: 09/21/2021] [Indexed: 05/23/2023]
Abstract
Plastic waste and its environmental hazards have been attracting public attention as a global sustainability issue. This study builds a neural network model to forecast plastic waste generation of the EU-27 in 2030 and evaluates how the interventions could mitigate the adverse impact of plastic waste on the environment. The black-box model is interpreted using SHapley Additive exPlanations (SHAP) for managerial insights. The dependence on predictors (i.e., energy consumption, circular material use rate, economic complexity index, population, and real gross domestic product) and their interactions are discussed. The projected plastic waste generation of the EU-27 is estimated to reach 17 Mt/y in 2030. With an EU targeted recycling rate (55%) in 2030, the environmental impacts would still be higher than in 2018, especially global warming potential and plastic marine pollution. This result highlights the importance of plastic waste reduction, especially for the clustering algorithm-based grouped countries with a high amount of untreated plastic waste per capita. Compared to the other assessed scenarios, Scenario 4 with waste reduction (50% recycling, 47.6% energy recovery, 2.4% landfill) shows the lowest impact in acidification, eutrophication, marine aquatic toxicity, plastic marine pollution, and abiotic depletion. However, the global warming potential (8.78 Gt CO2eq) is higher than that in 2018, while Scenario 3 (55% recycling, 42.6% energy recovery, 2.4% landfill) is better in this aspect than Scenario 4. This comprehensive analysis provides pertinent insights into policy interventions towards environmental hazard mitigation.
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Affiliation(s)
- Yee Van Fan
- Sustainable Process Integration Laboratory - SPIL, NETME Centre, Faculty of Mechanical Engineering, Brno University of Technology - VUT Brno, Technická 2896/2, 616 69 Brno, Czech Republic.
| | - Peng Jiang
- Department of Industrial Engineering and Engineering Management, Business School, Sichuan University, Chengdu 610064, China
| | - Raymond R Tan
- Chemical Engineering Department, De La Salle University, 2401 Taft Avenue, 0922 Manila, Philippines
| | - Kathleen B Aviso
- Chemical Engineering Department, De La Salle University, 2401 Taft Avenue, 0922 Manila, Philippines
| | - Fengqi You
- Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY 14853, USA
| | - Xiang Zhao
- Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY 14853, USA
| | - Chew Tin Lee
- Department of Bioprocess Engineering, School of Chemical and Energy Engineering, Universiti Teknologi Malaysia (UTM), 81310 UTM Johor Bahru, Johor, Malaysia
| | - Jiří Jaromír Klemeš
- Sustainable Process Integration Laboratory - SPIL, NETME Centre, Faculty of Mechanical Engineering, Brno University of Technology - VUT Brno, Technická 2896/2, 616 69 Brno, Czech Republic
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17
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Zheng J, Cole T, Zhang Y, Kim J, Tang SY. Exploiting machine learning for bestowing intelligence to microfluidics. Biosens Bioelectron 2021; 194:113666. [PMID: 34600338 DOI: 10.1016/j.bios.2021.113666] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Revised: 09/18/2021] [Accepted: 09/21/2021] [Indexed: 02/06/2023]
Abstract
Intelligent microfluidics is an emerging cross-discipline research area formed by combining microfluidics with machine learning. It uses the advantages of microfluidics, such as high throughput and controllability, and the powerful data processing capabilities of machine learning, resulting in improved systems in biotechnology and chemistry. Compared to traditional microfluidics using manual analysis methods, intelligent microfluidics needs less human intervention, and results in a more user-friendly experience with faster processing. There is a paucity of literature reviewing this burgeoning and highly promising cross-discipline. Therefore, we herein comprehensively and systematically summarize several aspects of microfluidic applications enabled by machine learning. We list the types of microfluidics used in intelligent microfluidic applications over the last five years, as well as the machine learning algorithms and the hardware used for training. We also present the most recent advances in key technologies, developments, challenges, and the emerging opportunities created by intelligent microfluidics.
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Affiliation(s)
- Jiahao Zheng
- Department of Electronic, Electrical and Systems Engineering, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK
| | - Tim Cole
- Department of Electronic, Electrical and Systems Engineering, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK
| | - Yuxin Zhang
- Department of Electronic, Electrical and Systems Engineering, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK
| | - Jeeson Kim
- Department of Intelligent Mechatronics Engineering, Sejong University, Seoul, 05006, South Korea.
| | - Shi-Yang Tang
- Department of Electronic, Electrical and Systems Engineering, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
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18
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Wang Z, Zhou Y, Chen M. Computer‐Aided
Living Polymerization Conducted under
Continuous‐Flow
Conditions
†. CHINESE J CHEM 2021. [DOI: 10.1002/cjoc.202100544] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Zeyu Wang
- State Key Laboratory of Molecular Engineering of Polymers, Department of Macromolecular Science, Fudan University Shanghai 200438 China
| | - Yang Zhou
- State Key Laboratory of Molecular Engineering of Polymers, Department of Macromolecular Science, Fudan University Shanghai 200438 China
| | - Mao Chen
- State Key Laboratory of Molecular Engineering of Polymers, Department of Macromolecular Science, Fudan University Shanghai 200438 China
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19
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Liu L, Bi M, Wang Y, Liu J, Jiang X, Xu Z, Zhang X. Artificial intelligence-powered microfluidics for nanomedicine and materials synthesis. NANOSCALE 2021; 13:19352-19366. [PMID: 34812823 DOI: 10.1039/d1nr06195j] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Artificial intelligence (AI) is an emerging technology with great potential, and its robust calculation and analysis capabilities are unmatched by traditional calculation tools. With the promotion of deep learning and open-source platforms, the threshold of AI has also become lower. Combining artificial intelligence with traditional fields to create new fields of high research and application value has become a trend. AI has been involved in many disciplines, such as medicine, materials, energy, and economics. The development of AI requires the support of many kinds of data, and microfluidic systems can often mine object data on a large scale to support AI. Due to the excellent synergy between the two technologies, excellent research results have emerged in many fields. In this review, we briefly review AI and microfluidics and introduce some applications of their combination, mainly in nanomedicine and material synthesis. Finally, we discuss the development trend of the combination of the two technologies.
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Affiliation(s)
- Linbo Liu
- John A. Paulson School of Engineering and Applied Science, Harvard University, Cambridge, MA 02138, USA
| | - Mingcheng Bi
- Institute of Process Equipment, College of Energy Engineering, Zhejiang University, Hangzhou 310027, P.R. China
| | - Yunhua Wang
- John A. Paulson School of Engineering and Applied Science, Harvard University, Cambridge, MA 02138, USA
| | - Junfeng Liu
- Institute of Process Equipment, College of Energy Engineering, Zhejiang University, Hangzhou 310027, P.R. China
| | - Xiwen Jiang
- College of Biological Science and Engineering, Fuzhou university, Fuzhou 350108, P.R. China
| | - Zhongbin Xu
- Institute of Process Equipment, College of Energy Engineering, Zhejiang University, Hangzhou 310027, P.R. China
| | - Xingcai Zhang
- John A. Paulson School of Engineering and Applied Science, Harvard University, Cambridge, MA 02138, USA
- School of Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
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20
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Vikram A, Brudnak K, Zahid A, Shim M, Kenis PJA. Accelerated screening of colloidal nanocrystals using artificial neural network-assisted autonomous flow reactor technology. NANOSCALE 2021; 13:17028-17039. [PMID: 34622262 DOI: 10.1039/d1nr05497j] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Colloidal semiconductor nanocrystals with tunable optical and electronic properties are opening up exciting opportunities for high-performance optoelectronics, photovoltaics, and bioimaging applications. Identifying the optimal synthesis conditions and screening of synthesis recipes in search of efficient synthesis pathways to obtain nanocrystals with desired optoelectronic properties, however, remains one of the major bottlenecks for accelerated discovery of colloidal nanocrystals. Conventional strategies, often guided by limited understanding of the underlying mechanisms remain expensive in both time and resources, thus significantly impeding the overall discovery process. In response, an autonomous experimentation platform is presented as a viable approach for accelerated synthesis screening and optimization of colloidal nanocrystals. Using a machine-learning-based predictive synthesis approach, integrated with automated flow reactor and inline spectroscopy, indium phosphide nanocrystals are autonomously synthesized. Their polydispersity for different target absorption wavelengths across the visible spectrum is simultaneously optimized during the autonomous experimentation, while utilizing minimal self-driven experiments (less than 50 experiments within 2 days). Starting with no-prior-knowledge of the synthesis, an ensemble neural network is trained through autonomous experiments to accurately predict the reaction outcome across the entire synthesis parameter space. The predicted parameter space map also provides new nucleation-growth kinetic insights to achieve high monodispersity in size of colloidal nanocrystals.
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Affiliation(s)
- Ajit Vikram
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
| | - Ken Brudnak
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
| | - Arwa Zahid
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
| | - Moonsub Shim
- Department of Materials Science and Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA
| | - Paul J A Kenis
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
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21
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Erps T, Foshey M, Luković MK, Shou W, Goetzke HH, Dietsch H, Stoll K, von Vacano B, Matusik W. Accelerated discovery of 3D printing materials using data-driven multiobjective optimization. SCIENCE ADVANCES 2021; 7:eabf7435. [PMID: 34652949 PMCID: PMC8519564 DOI: 10.1126/sciadv.abf7435] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Additive manufacturing has become one of the forefront technologies in fabrication, enabling products impossible to manufacture before. Although many materials exist for additive manufacturing, most suffer from performance trade-offs. Current materials are designed with inefficient human-driven intuition-based methods, leaving them short of optimal solutions. We propose a machine learning approach to accelerating the discovery of additive manufacturing materials with optimal trade-offs in mechanical performance. A multiobjective optimization algorithm automatically guides the experimental design by proposing how to mix primary formulations to create better performing materials. The algorithm is coupled with a semiautonomous fabrication platform to substantially reduce the number of performed experiments and overall time to solution. Without prior knowledge of the primary formulations, the proposed methodology autonomously uncovers 12 optimal formulations and enlarges the discovered performance space 288 times after only 30 experimental iterations. This methodology could be easily generalized to other material design systems and enable automated discovery.
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Affiliation(s)
- Timothy Erps
- Computer Science and Artificial Intelligence Laboratory (CSAIL), Electrical Engineering and Computer Science Department, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Michael Foshey
- Computer Science and Artificial Intelligence Laboratory (CSAIL), Electrical Engineering and Computer Science Department, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
- Corresponding author. (M.F.); (W.S.)
| | - Mina Konaković Luković
- Computer Science and Artificial Intelligence Laboratory (CSAIL), Electrical Engineering and Computer Science Department, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Wan Shou
- Computer Science and Artificial Intelligence Laboratory (CSAIL), Electrical Engineering and Computer Science Department, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
- Corresponding author. (M.F.); (W.S.)
| | - Hanns Hagen Goetzke
- BASF SE, Advanced Materials and Systems Research, Carl Bosch Str 38, 67056 Ludwigshafen, Germany
| | - Herve Dietsch
- BASF SE, Advanced Materials and Systems Research, Carl Bosch Str 38, 67056 Ludwigshafen, Germany
| | - Klaus Stoll
- BASF SE, Advanced Materials and Systems Research, Carl Bosch Str 38, 67056 Ludwigshafen, Germany
| | - Bernhard von Vacano
- BASF SE, Advanced Materials and Systems Research, Carl Bosch Str 38, 67056 Ludwigshafen, Germany
- Harvard John A Paulson School of Engineering and Applied Science, 29 Oxford Street, Cambridge, MA 02138, USA
| | - Wojciech Matusik
- Computer Science and Artificial Intelligence Laboratory (CSAIL), Electrical Engineering and Computer Science Department, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
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22
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Comparative Evaluation of Artificial Neural Networks and Data Analysis in Predicting Liposome Size in a Periodic Disturbance Micromixer. MICROMACHINES 2021; 12:mi12101164. [PMID: 34683215 PMCID: PMC8537903 DOI: 10.3390/mi12101164] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Revised: 09/19/2021] [Accepted: 09/24/2021] [Indexed: 12/14/2022]
Abstract
Artificial neural networks (ANN) and data analysis (DA) are powerful tools for supporting decision-making. They are employed in diverse fields, and one of them is nanotechnology; for example, in predicting silver nanoparticles size. To our knowledge, we are the first to use ANN to predict liposome size (LZ). Liposomes are lipid nanoparticles used in different biomedical applications that can be produced in Dean-Forces-based microdevices such as the Periodic Disturbance Micromixer (PDM). In this work, ANN and DA techniques are used to build a LZ prediction model by using the most relevant variables in a PDM, the Flow Rate Radio (FRR), and the Total Flow Rate (TFR), and the temperature, solvents, and concentrations were kept constant. The ANN was designed in MATLAB and fed data from 60 experiments with 70% training, 15% validation, and 15% testing. For DA, a regression analysis was used. The model was evaluated; it showed a 0.98147 correlation coefficient for training and 0.97247 in total data compared with 0.882 obtained by DA.
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23
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Gu Y, Lin P, Zhou C, Chen M. Machine learning-assisted systematical polymerization planning: case studies on reversible-deactivation radical polymerization. Sci China Chem 2021. [DOI: 10.1007/s11426-020-9969-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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24
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Ma S, Zhao H, Galan EA. Integrating Engineering, Automation, and Intelligence to Catalyze the Biomedical Translation of Organoids. Adv Biol (Weinh) 2021; 5:e2100535. [PMID: 33984193 DOI: 10.1002/adbi.202100535] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Revised: 04/21/2021] [Indexed: 12/13/2022]
Abstract
Organoid technology has developed at an impressive speed during the past decade. Still, organoids are not widely used in practical applications as expected. It is believed that this translation can be greatly accelerated with the integration of engineering and artificial intelligence into current research practices. It is proposed that this approach is the missing link to realize key milestones in organoid technology, namely, high-throughput, homogeneous, and standardized production, automated manipulation, and intelligent monitoring, evaluation, and control via integrated on-chip instrumentation and artificial intelligence. It is suggested that organoids-on-a-chip are the ideal platform to achieve these feats. Once these techniques are established and adopted by the scientific community, the rapid translation of organoids may be seen from laboratories to the clinics and pharmaceutical industry.
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Affiliation(s)
- Shaohua Ma
- Tsinghua-Berkeley Shenzhen Institute (TBSI), Shenzhen International Graduate School (SIGS), Tsinghua University, Shenzhen, 518055, China
| | - Haoran Zhao
- Tsinghua-Berkeley Shenzhen Institute (TBSI), Shenzhen International Graduate School (SIGS), Tsinghua University, Shenzhen, 518055, China
| | - Edgar A Galan
- Tsinghua-Berkeley Shenzhen Institute (TBSI), Shenzhen International Graduate School (SIGS), Tsinghua University, Shenzhen, 518055, China
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25
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Chen B, Qin F, Su M, Zhang Z, Pan Q, Zou M, Yang X, Chen S, Derome D, Carmeliet J, Song Y. Self-Driven Multiplex Reaction: Reactant and Product Diffusion via a Transpiration-Inspired Capillary. ACS APPLIED MATERIALS & INTERFACES 2021; 13:22031-22039. [PMID: 33939416 DOI: 10.1021/acsami.1c03614] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
When dealing with reactions of a liquid reactant and a solid catalyst, macroreactors with vigorous stirring equipment may be dangerous and cause wastage of energy. Reducing the diffusion distance and promoting reactants to reach the catalyst surface for efficient reaction remain the key challenges. Here, inspired by capillary-driven water motion in plants, we propose to implement a self-driven multiplex reaction (SMR) in nanocatalyst-loaded microchannels. Unlike the classical capillary rise, the droplet in SMR has variable pressure difference, leading to tunable flow velocity for controlling the reaction rate without any auxiliary equipment. The SMR in microchannels contributes to an increase in the reaction rate by more than 2 orders of magnitude compared to that in macroreactors. Specifically, this strategy reduces the reaction volume by 170 times, the catalyst usage by about 12 times, and the energy consumption by 50 times. This apparatus with a small volume and less catalyst content promises to provide an efficient strategy for the precise manipulation of chemical reactions.
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Affiliation(s)
- Bingda Chen
- Key Laboratory of Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center of Nanomaterials for Green Printing Technology, Beijing National Laboratory for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No. 19A, 100049 Beijing, P. R. China
| | - Feifei Qin
- Chair of Building Physics, Department of Mechanical and Process Engineering, ETH Zürich (Swiss Federal Institute of Technology in Zürich), Zürich 8092, Switzerland
| | - Meng Su
- Key Laboratory of Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center of Nanomaterials for Green Printing Technology, Beijing National Laboratory for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No. 19A, 100049 Beijing, P. R. China
| | - Zeying Zhang
- Key Laboratory of Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center of Nanomaterials for Green Printing Technology, Beijing National Laboratory for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No. 19A, 100049 Beijing, P. R. China
| | - Qi Pan
- Key Laboratory of Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center of Nanomaterials for Green Printing Technology, Beijing National Laboratory for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
| | - Miaomiao Zou
- Key Laboratory of Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center of Nanomaterials for Green Printing Technology, Beijing National Laboratory for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No. 19A, 100049 Beijing, P. R. China
| | - Xu Yang
- Key Laboratory of Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center of Nanomaterials for Green Printing Technology, Beijing National Laboratory for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
| | - Sisi Chen
- Key Laboratory of Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center of Nanomaterials for Green Printing Technology, Beijing National Laboratory for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
| | - Dominique Derome
- Department of Civil and Building Engineering, Université de Sherbrooke, Sherbrooke, Quebec J1K 2R1, Canada
| | - Jan Carmeliet
- Chair of Building Physics, Department of Mechanical and Process Engineering, ETH Zürich (Swiss Federal Institute of Technology in Zürich), Zürich 8092, Switzerland
| | - Yanlin Song
- Key Laboratory of Green Printing, Institute of Chemistry, Chinese Academy of Sciences, Beijing Engineering Research Center of Nanomaterials for Green Printing Technology, Beijing National Laboratory for Molecular Sciences (BNLMS), Zhongguancun North First Street 2, 100190 Beijing, P. R. China
- University of Chinese Academy of Sciences, Yuquan Road No. 19A, 100049 Beijing, P. R. China
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26
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Li J, Šimek H, Ilioae D, Jung N, Bräse S, Zappe H, Dittmeyer R, Ladewig BP. In situ sensors for flow reactors – a review. REACT CHEM ENG 2021. [DOI: 10.1039/d1re00038a] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
A comprehensive review on integrating microfluidic reactors with in situ sensors for reaction probing of chemical transformation.
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Affiliation(s)
- Jun Li
- Institute for Micro Process Engineering (IMVT), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344, Germany
| | - Helena Šimek
- Institute of Biological and Chemical Systems (IBCS-FMS), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344, Germany
| | - David Ilioae
- Gisela and Erwin Sick Laboratory for Micro-optics, Department of Microsystems Engineering, University of Freiburg, Germany
| | - Nicole Jung
- Institute of Biological and Chemical Systems (IBCS-FMS), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344, Germany
| | - Stefan Bräse
- Institute of Biological and Chemical Systems (IBCS-FMS), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344, Germany
| | - Hans Zappe
- Gisela and Erwin Sick Laboratory for Micro-optics, Department of Microsystems Engineering, University of Freiburg, Germany
| | - Roland Dittmeyer
- Institute for Micro Process Engineering (IMVT), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344, Germany
| | - Bradley P. Ladewig
- Institute for Micro Process Engineering (IMVT), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, Eggenstein-Leopoldshafen, 76344, Germany
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27
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Thakkar A, Johansson S, Jorner K, Buttar D, Reymond JL, Engkvist O. Artificial intelligence and automation in computer aided synthesis planning. REACT CHEM ENG 2021. [DOI: 10.1039/d0re00340a] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
In this perspective we deal with questions pertaining to the development of synthesis planning technologies over the course of recent years.
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Affiliation(s)
- Amol Thakkar
- Hit Discovery
- Discovery Sciences
- R&D
- AstraZeneca
- Gothenburg
| | | | - Kjell Jorner
- Early Chemical Development
- Pharmaceutical Sciences
- R&D
- AstraZeneca
- Macclesfield
| | - David Buttar
- Early Chemical Development
- Pharmaceutical Sciences
- R&D
- AstraZeneca
- Macclesfield
| | - Jean-Louis Reymond
- Department of Chemistry and Biochemistry
- University of Bern
- 3012 Bern
- Switzerland
| | - Ola Engkvist
- Hit Discovery
- Discovery Sciences
- R&D
- AstraZeneca
- Gothenburg
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28
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Ahmadi F, Quach ABV, Shih SCC. Is microfluidics the "assembly line" for CRISPR-Cas9 gene-editing? BIOMICROFLUIDICS 2020; 14:061301. [PMID: 33262863 PMCID: PMC7688342 DOI: 10.1063/5.0029846] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Accepted: 11/09/2020] [Indexed: 06/12/2023]
Abstract
Acclaimed as one of the biggest scientific breakthroughs, the technology of CRISPR has brought significant improvement in the biotechnological spectrum-from editing genetic defects in diseases for gene therapy to modifying organisms for the production of biofuels. Since its inception, the CRISPR-Cas9 system has become easier and more versatile to use. Many variants have been found, giving the CRISPR toolkit a great range that includes the activation and repression of genes aside from the previously known knockout and knockin of genes. Here, in this Perspective, we describe efforts on automating the gene-editing workflow, with particular emphasis given on the use of microfluidic technology. We discuss how automation can address the limitations of gene-editing and how the marriage between microfluidics and gene-editing will expand the application space of CRISPR.
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Affiliation(s)
| | | | - Steve C. C. Shih
- Author to whom correspondence should be addressed:. Tel.: +1-(514) 848-2424 x7579
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Rizkin BA, Hartman RL. Activation of homogenous polyolefin catalysis with a machine-assisted reactor laboratory-in-a-box (μAIR-LAB). REACT CHEM ENG 2020. [DOI: 10.1039/d0re00139b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Catalysis discovery is typically limited to specialized labs – this work demonstrates an Artificially Intelligent Microreactor Lab in a Box applied to investigate the chemistry of different co-catalysts for zirconocene-catalyzed olefin polymerization.
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Affiliation(s)
- Benjamin A. Rizkin
- New York University
- Department of Chemical and Biomolecular Engineering
- Brooklyn NY
- USA
| | - Ryan L. Hartman
- New York University
- Department of Chemical and Biomolecular Engineering
- Brooklyn NY
- USA
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