• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4604935)   Today's Articles (0)   Subscriber (49371)
For: Ruiz DM, Turowski VR, Murakami MT. Effects of the linker region on the structure and function of modular GH5 cellulases. Sci Rep 2016;6:28504. [PMID: 27334041 PMCID: PMC4917841 DOI: 10.1038/srep28504] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2016] [Accepted: 06/03/2016] [Indexed: 12/21/2022]  Open
Number Cited by Other Article(s)
1
Urbániková Ľ, Janeček Š. Trehalose synthases from the subfamily GH13_16 involved in α-glucan biosynthesis - a focus on their maltokinase domain. Int J Biol Macromol 2024;268:131680. [PMID: 38641282 DOI: 10.1016/j.ijbiomac.2024.131680] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Revised: 04/16/2024] [Accepted: 04/16/2024] [Indexed: 04/21/2024]
2
Stancanelli E, Liu W, Su G, Padagala V, Liu J. Developing a solid-phase method for the enzymatic synthesis of heparan sulfate and chondroitin sulfate backbones. Glycobiology 2024;34:cwad093. [PMID: 37995272 DOI: 10.1093/glycob/cwad093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2023]  Open
3
Garg A, González-Foutel NS, Gielnik MB, Kjaergaard M. Design of functional intrinsically disordered proteins. Protein Eng Des Sel 2024;37:gzae004. [PMID: 38431892 DOI: 10.1093/protein/gzae004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2023] [Revised: 12/22/2023] [Indexed: 03/05/2024]  Open
4
Gollan M, Black G, Munoz-Munoz J. A computational approach to optimising laccase-mediated polyethylene oxidation through carbohydrate-binding module fusion. BMC Biotechnol 2023;23:18. [PMID: 37415113 PMCID: PMC10324223 DOI: 10.1186/s12896-023-00787-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Accepted: 06/15/2023] [Indexed: 07/08/2023]  Open
5
Sidar A, Voshol GP, Vijgenboom E, Punt PJ. Novel Design of an α-Amylase with an N-Terminal CBM20 in Aspergillus niger Improves Binding and Processing of a Broad Range of Starches. Molecules 2023;28:5033. [PMID: 37446690 DOI: 10.3390/molecules28135033] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Revised: 06/17/2023] [Accepted: 06/26/2023] [Indexed: 07/15/2023]  Open
6
Zhang L, Laurent CVF, Schwaiger L, Wang L, Ma S, Ludwig R. Interdomain Linker of the Bioelecrocatalyst Cellobiose Dehydrogenase Governs the Electron Transfer. ACS Catal 2023;13:8195-8205. [PMID: 37342832 PMCID: PMC10278072 DOI: 10.1021/acscatal.3c02116] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Revised: 05/19/2023] [Indexed: 06/23/2023]
7
Berto GL, Mattos BD, Velasco J, Zhao B, Segato F, Rojas OJ, Arantes V. Endoglucanase effects on energy consumption in mechanical fibrillation of cellulose fibers into nanocelluloses. Int J Biol Macromol 2023:125002. [PMID: 37217053 DOI: 10.1016/j.ijbiomac.2023.125002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 03/16/2023] [Accepted: 05/19/2023] [Indexed: 05/24/2023]
8
Effect of multimodularity and spatial organization of glycoside hydrolases on catalysis. Essays Biochem 2023;67:629-638. [PMID: 36866571 DOI: 10.1042/ebc20220167] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Revised: 02/03/2023] [Accepted: 02/06/2023] [Indexed: 03/04/2023]
9
Wu X, Shi Z, Tian W, Liu M, Huang S, Liu X, Yin H, Wang L. A thermostable and CBM2-linked GH10 xylanase from Thermobifida fusca for paper bleaching. Front Bioeng Biotechnol 2022;10:939550. [PMID: 36091429 PMCID: PMC9459120 DOI: 10.3389/fbioe.2022.939550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2022] [Accepted: 08/02/2022] [Indexed: 11/25/2022]  Open
10
Sharma A, Balda S, Capalash N, Sharma P. Engineering multifunctional enzymes for agro-biomass utilization. BIORESOURCE TECHNOLOGY 2022;347:126706. [PMID: 35033642 DOI: 10.1016/j.biortech.2022.126706] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Revised: 01/07/2022] [Accepted: 01/08/2022] [Indexed: 06/14/2023]
11
The Linker Region Promotes Activity and Binding Efficiency of Modular LPMO towards Polymeric Substrate. Microbiol Spectr 2022;10:e0269721. [PMID: 35080440 PMCID: PMC8791183 DOI: 10.1128/spectrum.02697-21] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]  Open
12
Yusof NA, Masnoddin M, Charles J, Thien YQ, Nasib FN, Wong CMVL, Abdul Murad AM, Mahadi NM, Bharudin I. Can heat shock protein 70 (HSP70) serve as biomarkers in Antarctica for future ocean acidification, warming and salinity stress? Polar Biol 2022. [DOI: 10.1007/s00300-022-03006-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
13
Patel DK, Menon DV, Patel DH, Dave G. Linkers: A synergistic way for the synthesis of chimeric proteins. Protein Expr Purif 2021;191:106012. [PMID: 34767950 DOI: 10.1016/j.pep.2021.106012] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Revised: 10/30/2021] [Accepted: 11/03/2021] [Indexed: 11/15/2022]
14
Clerc I, Sagar A, Barducci A, Sibille N, Bernadó P, Cortés J. The diversity of molecular interactions involving intrinsically disordered proteins: A molecular modeling perspective. Comput Struct Biotechnol J 2021;19:3817-3828. [PMID: 34285781 PMCID: PMC8273358 DOI: 10.1016/j.csbj.2021.06.031] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 06/17/2021] [Accepted: 06/21/2021] [Indexed: 01/15/2023]  Open
15
Nguyen KHV, Dao TK, Nguyen HD, Nguyen KH, Nguyen TQ, Nguyen TT, Nguyen TMP, Truong NH, Do TH. Some characters of bacterial cellulases in goats' rumen elucidated by metagenomic DNA analysis and the role of fibronectin 3 module for endoglucanase function. Anim Biosci 2021;34:867-879. [PMID: 32882773 PMCID: PMC8100471 DOI: 10.5713/ajas.20.0115] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2020] [Accepted: 07/19/2020] [Indexed: 12/20/2022]  Open
16
Jafari D, Malih S, Gomari MM, Safari M, Jafari R, Farajollahi MM. Designing a chimeric subunit vaccine for influenza virus, based on HA2, M2e and CTxB: a bioinformatics study. BMC Mol Cell Biol 2020;21:89. [PMID: 33276715 PMCID: PMC7716444 DOI: 10.1186/s12860-020-00334-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Accepted: 11/25/2020] [Indexed: 11/10/2022]  Open
17
Singh S, Kumar K, Nath P, Goyal A. Role of glycine 256 residue in improving the catalytic efficiency of mutant endoglucanase of family 5 glycoside hydrolase from Bacillus amyloliquefaciens SS35. Biotechnol Bioeng 2020;117:2668-2682. [PMID: 32484905 DOI: 10.1002/bit.27448] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2020] [Revised: 05/24/2020] [Accepted: 05/31/2020] [Indexed: 11/07/2022]
18
Ernst HA, Mosbech C, Langkilde AE, Westh P, Meyer AS, Agger JW, Larsen S. The structural basis of fungal glucuronoyl esterase activity on natural substrates. Nat Commun 2020;11:1026. [PMID: 32094331 PMCID: PMC7039992 DOI: 10.1038/s41467-020-14833-9] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Accepted: 02/06/2020] [Indexed: 01/06/2023]  Open
19
Meng D, Wang J, You C. The properties of the linker in a mini-scaffoldin influence the catalytic efficiency of scaffoldin-mediated enzyme complexes. Enzyme Microb Technol 2020;133:109460. [DOI: 10.1016/j.enzmictec.2019.109460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Revised: 10/27/2019] [Accepted: 10/31/2019] [Indexed: 10/25/2022]
20
Molecular recognition of ubiquitin and Lys63-linked diubiquitin by STAM2 UIM-SH3 dual domain: the effect of its linker length and flexibility. Sci Rep 2019;9:14645. [PMID: 31601934 PMCID: PMC6787221 DOI: 10.1038/s41598-019-51182-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2019] [Accepted: 09/25/2019] [Indexed: 11/09/2022]  Open
21
The Link That Binds: The Linker of Hsp70 as a Helm of the Protein's Function. Biomolecules 2019;9:biom9100543. [PMID: 31569820 PMCID: PMC6843406 DOI: 10.3390/biom9100543] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2019] [Revised: 09/13/2019] [Accepted: 09/21/2019] [Indexed: 12/26/2022]  Open
22
Ge J, Remesh SG, Hammel M, Pan S, Mahan AD, Wang S, Wang X. Functional Relevance of Interleukin-1 Receptor Inter-domain Flexibility for Cytokine Binding and Signaling. Structure 2019;27:1296-1307.e5. [PMID: 31257107 DOI: 10.1016/j.str.2019.05.011] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2018] [Revised: 04/09/2019] [Accepted: 05/24/2019] [Indexed: 02/08/2023]
23
Sharma K, Fontes CMGA, Najmudin S, Goyal A. Molecular organization and protein stability of the Clostridium thermocellum glucuronoxylan endo-β-1,4-xylanase of family 30 glycoside hydrolase in solution. J Struct Biol 2019;206:335-344. [PMID: 30959107 DOI: 10.1016/j.jsb.2019.04.005] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Revised: 04/02/2019] [Accepted: 04/04/2019] [Indexed: 11/19/2022]
24
Cloning, expression, and characterization of novel GH5 endoglucanases from Thermobifida alba AHK119. J Biosci Bioeng 2019;127:554-562. [DOI: 10.1016/j.jbiosc.2018.10.015] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2018] [Revised: 10/13/2018] [Accepted: 10/16/2018] [Indexed: 01/01/2023]
25
Kahn A, Moraïs S, Galanopoulou AP, Chung D, Sarai NS, Hengge N, Hatzinikolaou DG, Himmel ME, Bomble YJ, Bayer EA. Creation of a functional hyperthermostable designer cellulosome. BIOTECHNOLOGY FOR BIOFUELS 2019;12:44. [PMID: 30858881 PMCID: PMC6394049 DOI: 10.1186/s13068-019-1386-y] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2018] [Accepted: 02/20/2019] [Indexed: 05/28/2023]
26
Wang Z, Zhang T, Long L, Ding S. Altering the linker in processive GH5 endoglucanase 1 modulates lignin binding and catalytic properties. BIOTECHNOLOGY FOR BIOFUELS 2018;11:332. [PMID: 30568732 PMCID: PMC6297974 DOI: 10.1186/s13068-018-1333-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2018] [Accepted: 12/07/2018] [Indexed: 06/09/2023]
27
Penumutchu S, Chiu LY, Meagher JL, Hansen AL, Stuckey JA, Tolbert BS. Differential Conformational Dynamics Encoded by the Linker between Quasi RNA Recognition Motifs of Heterogeneous Nuclear Ribonucleoprotein H. J Am Chem Soc 2018;140:11661-11673. [PMID: 30122033 PMCID: PMC6648666 DOI: 10.1021/jacs.8b05366] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
28
Guerriero G, Sergeant K, Legay S, Hausman JF, Cauchie HM, Ahmad I, Siddiqui KS. Novel Insights from Comparative In Silico Analysis of Green Microalgal Cellulases. Int J Mol Sci 2018;19:E1782. [PMID: 29914107 PMCID: PMC6032398 DOI: 10.3390/ijms19061782] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2018] [Revised: 06/08/2018] [Accepted: 06/08/2018] [Indexed: 11/24/2022]  Open
29
Hezaveh S, Zeng AP, Jandt U. Full Enzyme Complex Simulation: Interactions in Human Pyruvate Dehydrogenase Complex. J Chem Inf Model 2018;58:362-369. [PMID: 29298056 DOI: 10.1021/acs.jcim.7b00557] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
30
Costa MGS, Silva YF, Batista PR. Computational engineering of cellulase Cel9A-68 functional motions through mutations in its linker region. Phys Chem Chem Phys 2018;20:7643-7652. [DOI: 10.1039/c7cp07073j] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
31
Steiner D, Merz FW, Sonderegger I, Gulotti-Georgieva M, Villemagne D, Phillips DJ, Forrer P, Stumpp MT, Zitt C, Binz HK. Half-life extension using serum albumin-binding DARPin® domains. Protein Eng Des Sel 2017;30:583-591. [PMID: 29088432 DOI: 10.1093/protein/gzx022] [Citation(s) in RCA: 49] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2016] [Accepted: 04/14/2017] [Indexed: 01/10/2023]  Open
32
Badino SF, Bathke JK, Sørensen TH, Windahl MS, Jensen K, Peters GHJ, Borch K, Westh P. The influence of different linker modifications on the catalytic activity and cellulose affinity of cellobiohydrolase Cel7A from Hypocrea jecorina. Protein Eng Des Sel 2017;30:495-501. [PMID: 28873985 DOI: 10.1093/protein/gzx036] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2017] [Accepted: 07/04/2017] [Indexed: 12/13/2022]  Open
33
Ullah J, Chen H, Vastermark A, Jia J, Wu B, Ni Z, Le Y, Wang H. Impact of orientation and flexibility of peptide linkers on T. maritima lipase Tm1350 displayed on Bacillus subtilis spores surface using CotB as fusion partner. World J Microbiol Biotechnol 2017;33:166. [PMID: 28822027 DOI: 10.1007/s11274-017-2327-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2017] [Accepted: 07/26/2017] [Indexed: 11/27/2022]
34
Zhang D, Tu T, Wang Y, Li Y, Luo X, Zheng F, Wang X, Bai Y, Huang H, Su X, Yao B, Zhang T, Luo H. Improving the Catalytic Performance of a Talaromyces leycettanus α-Amylase by Changing the Linker Length. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2017;65:5041-5048. [PMID: 28573852 DOI: 10.1021/acs.jafc.7b00838] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
35
Ibrahim E, Jones KD, Taylor KE, Hosseney EN, Mills PL, Escudero JM. Molecular and biochemical characterization of recombinant cel12B, cel8C, and peh28 overexpressed in Escherichia coli and their potential in biofuel production. BIOTECHNOLOGY FOR BIOFUELS 2017;10:52. [PMID: 28413443 PMCID: PMC5327597 DOI: 10.1186/s13068-017-0732-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Accepted: 02/11/2017] [Indexed: 06/07/2023]
36
Liu J, Peng H, Cui J, Huang W, Kong L, Clarke JL, Jian H, Wang GL, Peng D. Molecular Characterization of A Novel Effector Expansin-like Protein from Heterodera avenae that Induces Cell Death in Nicotiana benthamiana. Sci Rep 2016;6:35677. [PMID: 27808156 PMCID: PMC5093861 DOI: 10.1038/srep35677] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2016] [Accepted: 10/04/2016] [Indexed: 11/09/2022]  Open
PrevPage 1 of 1 1Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA