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Zhu F, Miller E, Powell WC, Johnson K, Beggs A, Evenson GE, Walczak MA. Umpolung Ala
B
Reagents for the Synthesis of Non‐Proteogenic Amino Acids, Peptides and Proteins**. Angew Chem Int Ed Engl 2022; 61:e202207153. [PMID: 35653581 PMCID: PMC9329247 DOI: 10.1002/anie.202207153] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2022] [Indexed: 11/07/2022]
Abstract
Non-proteogenic amino acids and functionalized peptides are important motifs in modern drug discovery. Here we report that AlaB can serve as universal building blocks in the synthesis of a diverse collection of modified amino acids, peptides, and proteins. First, we develop the synthesis of AlaB from redox-active esters of aspartic acid resulting in a series of β-boronoalanine derivatives. Next, we show that AlaB can be integrated into automated oligopeptide solid-phase synthesis. AlaB is compatible with common transformations used in preparative peptide chemistry such as native chemical ligation and radical desulfurization as showcased by total synthesis of AlaB -containing ubiquitin. Furthermore, AlaB reagents participate in Pd-catalyzed reactions, including C-C cross-couplings and macrocyclizations. Taken together, AlaB synthons are practical reagents to access modified peptides, proteins, and in the synthesis of cyclic/stapled peptides.
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Affiliation(s)
- Feng Zhu
- Frontiers Science Center for Transformative Molecules Shanghai Key Laboratory for Molecular Engineering of Chiral Drugs School of Chemistry and Chemical Engineering Shanghai Jiao Tong University Shanghai 200240 China
| | - Eric Miller
- Department of Chemistry University of Colorado Boulder CO 80309 USA
| | - Wyatt C. Powell
- Department of Chemistry University of Colorado Boulder CO 80309 USA
| | - Kelly Johnson
- Department of Chemistry University of Colorado Boulder CO 80309 USA
| | - Alexander Beggs
- Department of Chemistry University of Colorado Boulder CO 80309 USA
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2
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Zhu F, Miller E, Powell W, Johnson K, Beggs A, Evenson G, Walczak MA. Umpolung AlaB Reagents for the Synthesis of Non‐Proteogenic Amino Acids, Peptides and Proteins. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202207153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Feng Zhu
- Shanghai Jiao Tong University Shanghai Key Laboratory for Molecular Engineering of Chiral Drugs CHINA
| | - Eric Miller
- University of Colorado Boulder Department of Chemistry UNITED STATES
| | - Wyatt Powell
- University of Colorado Boulder Department of Chemistry UNITED STATES
| | - Kelly Johnson
- University of Colorado Boulder Department of Chemistry UNITED STATES
| | - Alexander Beggs
- University of Colorado Boulder Department of Chemistry UNITED STATES
| | - Garrett Evenson
- University of Colorado Boulder Department of Chemistry UNITED STATES
| | - Maciej A. Walczak
- University of Colorado Boulder Department of Chemistry and Biochemistry 215 UCB 80309 Boulder UNITED STATES
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3
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Skwarecki AS, Nowak MG, Milewska MJ. Amino Acid and Peptide-Based Antiviral Agents. ChemMedChem 2021; 16:3106-3135. [PMID: 34254457 DOI: 10.1002/cmdc.202100397] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Indexed: 01/10/2023]
Abstract
A significant number of antiviral agents used in clinical practice are amino acids, short peptides, or peptidomimetics. Among them, several HIV protease inhibitors (e. g. lopinavir, atazanavir), HCV protease inhibitors (e. g. grazoprevir, glecaprevir), and HCV NS5A protein inhibitors have contributed to a significant decrease in mortality from AIDS and hepatitis. However, there is an ongoing need for the discovery of new antiviral agents and the development of existing drugs; amino acids, both proteinogenic and non-proteinogenic in nature, serve as convenient building blocks for this purpose. The synthesis of non-proteinogenic amino acid components of antiviral agents could be challenging due to the need for enantiomerically or diastereomerically pure products. Herein, we present a concise review of antiviral agents whose structures are based on amino acids of both natural and unnatural origin. Special attention is paid to the synthetic aspects of non-proteinogenic amino acid components of those agents.
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Affiliation(s)
- Andrzej S Skwarecki
- Department of Pharmaceutical Technology and Biochemistry and BioTechMed Center, Gdańsk University of Technology, 11/12 Gabriela Narutowicza Street, 80-233, Gdańsk, Poland
| | - Michał G Nowak
- Department of Organic Chemistry and BioTechMed Center, Gdańsk University of Technology, 11/12 Gabriela Narutowicza Street, 80-233, Gdańsk, Poland
| | - Maria J Milewska
- Department of Organic Chemistry and BioTechMed Center, Gdańsk University of Technology, 11/12 Gabriela Narutowicza Street, 80-233, Gdańsk, Poland
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4
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Leroux M, Huang W, Lemke Y, Koller TJ, Karaghiosoff K, Knochel P. Pyrrole-Protected β-Aminoalkylzinc Reagents for the Enantioselective Synthesis of Amino-Derivatives. Chemistry 2020; 26:8951-8957. [PMID: 32196786 PMCID: PMC7497206 DOI: 10.1002/chem.202000870] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2020] [Revised: 03/19/2020] [Indexed: 11/09/2022]
Abstract
Chiral β-aminoalkylzinc halides were prepared starting from optically pure commercial β-amino-alcohols. These amino-alcohols were converted to the corresponding N-pyrrolyl-protected alkyl iodides which undergo a zinc insertion in the presence of LiCl (THF, 25 °C, 10-90 min). Subsequent Negishi cross-coupling or acylation reactions with acid chlorides produced amino-derivatives with retention of chirality. Diastereoselective CBS-reductions of some prepared N-pyrrolyl-ketones provided 1,3-subsituted N-pyrrolyl-alcohols with high diastereoselectivity. Additionally, a deprotection procedure involving an ozonolysis allowed the conversion of the pyrrole-ring into a formamide without loss of optical purity.
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Affiliation(s)
- Marcel Leroux
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstrasse 5–13, Haus F81377MünchenGermany
| | - Wan‐Yun Huang
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstrasse 5–13, Haus F81377MünchenGermany
| | - Yannick Lemke
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstrasse 5–13, Haus F81377MünchenGermany
| | - Thaddäus J. Koller
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstrasse 5–13, Haus F81377MünchenGermany
| | - Konstantin Karaghiosoff
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstrasse 5–13, Haus F81377MünchenGermany
| | - Paul Knochel
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstrasse 5–13, Haus F81377MünchenGermany
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5
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Reeve PP, Grabowska U, Oden LS, Wiktelius D, Wångsell F, Jackson RFW. Radical Functionalization of Unsaturated Amino Acids: Synthesis of Side-Chain-Fluorinated, Azido-Substituted, and Hydroxylated Amino Acids. ACS OMEGA 2019; 4:10854-10865. [PMID: 31460183 PMCID: PMC6648964 DOI: 10.1021/acsomega.9b01509] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2019] [Accepted: 06/07/2019] [Indexed: 06/10/2023]
Abstract
A range of enantiomerically pure protected side-chain-fluorinated amino acids has been prepared (13 examples) by treatment of protected amino acids containing unsaturated side chains with a combination of Fe(III)/NaBH4 and Selectfluor. The modification of the conditions by replacement of Selectfluor with NaN3 allowed the preparation of side-chain azido-substituted amino acids (five examples), which upon catalytic hydrogenation gave the corresponding amines, isolated as lactams (four examples). Radical hydration of the unsaturated side chains leading to side-chain-hydroxylated protected amino acids has also been demonstrated.
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Affiliation(s)
- Philip
A. P. Reeve
- Department
of Chemistry, The University of Sheffield, Dainton Building, Sheffield S3 7HF, U.K.
| | | | | | | | | | - Richard F. W. Jackson
- Department
of Chemistry, The University of Sheffield, Dainton Building, Sheffield S3 7HF, U.K.
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6
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Larionov VA, Stoletova NV, Kovalev VI, Smol'yakov AF, Savel'yeva TF, Maleev VI. A general synthesis of unnatural α-amino acids by iron-catalysed olefin–olefin coupling via generated radicals. Org Chem Front 2019. [DOI: 10.1039/c9qo00108e] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
A general protocol for the asymmetric synthesis of unnatural α-amino acids with γ-tertiary and quaternary carbon centers via generated radicals is reported.
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Affiliation(s)
- Vladimir A. Larionov
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
- Department of Inorganic Chemistry
- Peoples’ Friendship University of Russia (RUDN University)
| | - Nadezhda V. Stoletova
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
| | - Vladislav I. Kovalev
- Dmitry Mendeleev University of Chemical Technology of Russia
- 125047 Moscow
- Russian Federation
| | - Alexander F. Smol'yakov
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
- Plekhanov Russian University of Economics
- 117997 Moscow
| | - Tat'yana F. Savel'yeva
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
| | - Victor I. Maleev
- A. N. Nesmeyanov Institute of Organoelement Compounds of Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
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7
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Brittain WDG, Cobb SL. Negishi cross-couplings in the synthesis of amino acids. Org Biomol Chem 2018; 16:10-20. [PMID: 29199315 DOI: 10.1039/c7ob02682j] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
The Negishi cross-coupling is a powerful C-C bond-forming reaction widely utilised in many areas of organic synthesis. This review details the use of Negishi cross-couplings in the synthesis of unnatural amino acids. The application of this reaction in the preparation of aromatic, heteroaromatic, and, complex amino acid derivatives are reviewed and presented herein.
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Affiliation(s)
| | - Steven L Cobb
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK.
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8
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Zhang H, Li H, Yang H, Fu H. Iron-Catalyzed Diastereoselective Synthesis of Unnatural Chiral Amino Acid Derivatives. Org Lett 2016; 18:3362-5. [DOI: 10.1021/acs.orglett.6b01493] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Hao Zhang
- Key Laboratory
of Bioorganic Phosphorus Chemistry and Chemical Biology (Ministry
of Education), Department of Chemistry, Tsinghua University, Beijing 100084, P. R. China
| | - Haifang Li
- Key Laboratory
of Bioorganic Phosphorus Chemistry and Chemical Biology (Ministry
of Education), Department of Chemistry, Tsinghua University, Beijing 100084, P. R. China
| | - Haijun Yang
- Key Laboratory
of Bioorganic Phosphorus Chemistry and Chemical Biology (Ministry
of Education), Department of Chemistry, Tsinghua University, Beijing 100084, P. R. China
| | - Hua Fu
- Key Laboratory
of Bioorganic Phosphorus Chemistry and Chemical Biology (Ministry
of Education), Department of Chemistry, Tsinghua University, Beijing 100084, P. R. China
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9
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Wang B, Lu C, Zhang SY, He G, Nack WA, Chen G. Palladium-Catalyzed Stereoretentive Olefination of Unactivated C(sp3)–H Bonds with Vinyl Iodides at Room Temperature: Synthesis of β-Vinyl α-Amino Acids. Org Lett 2014; 16:6260-3. [DOI: 10.1021/ol503248f] [Citation(s) in RCA: 98] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Bo Wang
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Chengxi Lu
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Shu-Yu Zhang
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Gang He
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - William A. Nack
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Gong Chen
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
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10
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Hoppmann C, Alexiev U, Irran E, Rück-Braun K. Synthesis and fluorescence of xanthone amino acids. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2013.06.113] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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11
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Abstract
The first enantiospecific total synthesis of the antibacterial natural product (+)-pleuromutilin has been achieved. The approach includes the synthesis of a non-racemic cyclisation substrate from (+)-trans-dihydrocarvone, a highly selective SmI2-mediated cyclisation cascade, an electron transfer reduction of a hindered ester, and the first efficient conversion of (+)-mutilin to the target.
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Affiliation(s)
- Neal J Fazakerley
- School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
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12
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Lauer AM, Wu J. Palladium-catalyzed allylic fluorination of cinnamyl phosphorothioate esters. Org Lett 2012; 14:5138-41. [PMID: 22998123 DOI: 10.1021/ol302263m] [Citation(s) in RCA: 73] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
A highly regioselective, Pd-catalyzed allylic fluorination of phosphorothioate esters is reported. This chemistry addresses several limitations of previously reported methods in which elimination and lack of reactivity were problematic. Preliminary mechanistic investigations reveal that these reactions are stereospecific and provide fluorinated products with net retention of stereochemical configuration. In analogy to other Pd-catalyzed allylic substitution reactions, this process likely proceeds through a palladium π-allyl intermediate.
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Affiliation(s)
- Andrew M Lauer
- Department of Chemistry, Dartmouth College, Hanover, New Hampshire 03755, USA
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13
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Lauer AM, Mahmud F, Wu J. Cu(I)-catalyzed, α-selective, allylic alkylation reactions between phosphorothioate esters and organomagnesium reagents. J Am Chem Soc 2011; 133:9119-23. [PMID: 21591722 DOI: 10.1021/ja202954b] [Citation(s) in RCA: 78] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Regiocontrol of allylic alkylation reactions involving hard nucleophiles remains a significant challenge and continues to be an active area of research. The lack of general methods in which α-alkylation is favored underscores the need for the development of new processes for achieving this type of selectivity. We report that Cu(I) catalyzes the allylic substitution of phosphorothioate esters with excellent α-regioselectivity, regardless of the nature of the Grignard reagent that is used. To the best of our knowledge, the Cu-catalyzed allylic alkylation of phosphorothioate esters has never been described. We have also developed a simple protocol for inducing high α selectivity starting from secondary allylic halides. This is accomplished by using sodium phosphorothioates as an additive.
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Affiliation(s)
- Andrew M Lauer
- Department of Chemistry, Dartmouth College, Hanover, New Hampshire 03755, USA
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14
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Han X, Zhang Y, Wu J. Mild Two-Step Process for the Transition-Metal-Free Synthesis of Carbon−Carbon Bonds from Allylic Alcohols/Ethers and Grignard Reagents. J Am Chem Soc 2010; 132:4104-6. [DOI: 10.1021/ja100747n] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Xinping Han
- Department of Chemistry, Dartmouth College, Hanover, New Hampshire 03755
| | - Yanhua Zhang
- Department of Chemistry, Dartmouth College, Hanover, New Hampshire 03755
| | - Jimmy Wu
- Department of Chemistry, Dartmouth College, Hanover, New Hampshire 03755
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15
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von Nussbaum F, Anlauf S, Freiberg C, Benet-Buchholz J, Schamberger J, Henkel T, Schiffer G, Häbich D. Total Synthesis and Initial Structure–Activity Relationships of Longicatenamycin A. ChemMedChem 2008; 3:619-26. [DOI: 10.1002/cmdc.200700297] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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17
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Köhler F, Gais HJ, Raabe G. Asymmetric Synthesis of Highly Substituted γ-Amino Acids from Allyltitanium Sulfoximines. Org Lett 2007; 9:1231-4. [PMID: 17326643 DOI: 10.1021/ol063082q] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
[structure: see text]. Asymmetric syntheses of the highly substituted protected gamma-amino acids 10a, 10b, 18, and 21 have been developed starting from the allyltitanium sulfoximines V and VI, respectively, and furan-2-carbaldehyde.
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Affiliation(s)
- Franz Köhler
- Institut für Organische Chemie der Rheinisch-Westfälischen Technischen Hochschule Aachen, Landoltweg 1, D-52056 Aachen, Germany
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