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Roy I, David AHG, Das PJ, Pe DJ, Stoddart JF. Fluorescent cyclophanes and their applications. Chem Soc Rev 2022; 51:5557-5605. [PMID: 35704949 DOI: 10.1039/d0cs00352b] [Citation(s) in RCA: 25] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
With the serendipitous discovery of crown ethers by Pedersen more than half a century ago and the subsequent introduction of host-guest chemistry and supramolecular chemistry by Cram and Lehn, respectively, followed by the design and synthesis of wholly synthetic cyclophanes-in particular, fluorescent cyclophanes, having rich structural characteristics and functions-have been the focus of considerable research activity during the past few decades. Cyclophanes with remarkable emissive properties have been investigated continuously over the years and employed in numerous applications across the field of science and technology. In this Review, we feature the recent developments in the chemistry of fluorescent cyclophanes, along with their design and synthesis. Their host-guest chemistry and applications related to their structure and properties are highlighted.
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Affiliation(s)
- Indranil Roy
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208-3113, USA.
| | - Arthur H G David
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208-3113, USA.
| | - Partha Jyoti Das
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208-3113, USA.
| | - David J Pe
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208-3113, USA.
| | - J Fraser Stoddart
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208-3113, USA. .,School of Chemistry, University of New South Wales, Sydney, NSW 2052, Australia.,Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou 310021, China.,ZJU-Hangzhou Global Scientific and Technological Innovation Center Hangzhou, 311215, China
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2
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Facile synthesis, X-ray diffraction studies, photophysical properties and DFT-D based conformational analysis of octa and dodecacyanomethoxycalix[4]resorcinarenes. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128215] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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3
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Grotkopp O, Mayer B, Müller TJJ. Diversity-Oriented Synthesis and Optical Properties of Bichromophoric Pyrrole-Fluorophore Conjugates. Front Chem 2018; 6:579. [PMID: 30542648 PMCID: PMC6277781 DOI: 10.3389/fchem.2018.00579] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2018] [Accepted: 11/06/2018] [Indexed: 11/16/2022] Open
Abstract
The mild reaction conditions of the palladium-copper coupling-isomerization reaction open a highly convergent, chromogenic route to blue emissive pyrroles in the sense of a consecutive four-component reaction. By virtue of this strategy a phenol derivative can be readily accessed, which can be transformed in a level-2 transformation to a library of bichromophoric pyrrol-fluorophore conjugates by facile alkylation with fluorophore halides. The photophysics of the underlying blue emitter derivative and the conjugates is studied by absorption and emission spectroscopy, furnishing intramolecular energy transfer at short distances as well as competing fluorescence quenching. In some cases partial energy transfer results in the occurrence of dual emission, for instance seen as magenta-rose emission arising from blue and red orange luminescence. The experimental photophysical studies are rationalized by DFT and TD-DFT calculations.
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Affiliation(s)
- Oliver Grotkopp
- Institut für Organische Chemie und Makromolekulare Chemie, Heinrich-Heine-Universität Düsseldorf Düsseldorf, Germany
| | - Bernhard Mayer
- Institut für Organische Chemie und Makromolekulare Chemie, Heinrich-Heine-Universität Düsseldorf Düsseldorf, Germany
| | - Thomas J J Müller
- Institut für Organische Chemie und Makromolekulare Chemie, Heinrich-Heine-Universität Düsseldorf Düsseldorf, Germany
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Dansyl Based “Turn-On” Fluorescent Sensor for Cu2+ Ion Detection and the Application to Living Cell Imaging. J Fluoresc 2017; 27:2201-2212. [DOI: 10.1007/s10895-017-2161-8] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2017] [Accepted: 08/10/2017] [Indexed: 02/06/2023]
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Riley S, Staples RJ, Biros SM, Ngassa FN. Crystal structure of phenyl 2,4,5-tri-chloro-benzene-sulfonate. Acta Crystallogr E Crystallogr Commun 2016; 72:789-92. [PMID: 27308043 PMCID: PMC4908567 DOI: 10.1107/s2056989016007325] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2016] [Accepted: 05/02/2016] [Indexed: 11/16/2022]
Abstract
The title compound, C12H7Cl3O3S, was synthesized via a nucleophilic substitution reaction between phenol and 2,4,5-tri-chloro-benzene-sulfonyl chloride. The two aryl rings are oriented gauche to one another around the sulfonate S-O bond, with a C-S-O-C torsion angle of -70.68 (16)°, and the two rings are inclined to one another by 72.40 (7)°. In the crystal, mol-ecules are linked via various C-Cl⋯π inter-actions, forming ribbons propagating along [100]. Neighboring ribbons are linked by a weak C-Cl⋯π inter-action, forming layers parallel to (010).
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Affiliation(s)
- Sean Riley
- Department of Chemistry, Grand Valley State University, 1 Campus Dr., Allendale, MI 49401, USA
| | - Richard J. Staples
- Center for Crystallographic Research, Department of Chemistry, Michigan State University, 578 S. Shaw Lane, East Lansing, MI, 48824, USA
| | - Shannon M. Biros
- Department of Chemistry, Grand Valley State University, 1 Campus Dr., Allendale, MI 49401, USA
| | - Felix N. Ngassa
- Department of Chemistry, Grand Valley State University, 1 Campus Dr., Allendale, MI 49401, USA
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Tero TR, Salorinne K, Lehtivuori H, Ihalainen JA, Nissinen M. The Structural Diversity of Benzofuran Resorcinarene Leads to Enhanced Fluorescence. Chem Asian J 2014; 9:1860-7. [DOI: 10.1002/asia.201402016] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2014] [Revised: 03/25/2014] [Indexed: 11/12/2022]
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Beyeh NK, Valkonen A, Rissanen K. Deprotonation of resorcinarenes by mono- and diamine bases: complexation and intermolecular interactions in the solid state. CrystEngComm 2014. [DOI: 10.1039/c3ce42291g] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The deprotonation of a resorcinarene by small organic bases results in 1 : 1 inclusion and 1 : 2 pseudo-capsular ion-pair complexes.
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Affiliation(s)
- N. Kodiah Beyeh
- Department of Chemistry
- University of Jyvaskyla
- 40014 Jyvaskyla, Finland
| | - Arto Valkonen
- Department of Chemistry
- University of Jyvaskyla
- 40014 Jyvaskyla, Finland
- Department of Chemistry and Bioengineering
- Tampere University of Technology
| | - Kari Rissanen
- Department of Chemistry
- University of Jyvaskyla
- 40014 Jyvaskyla, Finland
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Affiliation(s)
| | - Nigel T. Lucas
- a Department of Chemistry , University of Otago , Dunedin , 9054 , New Zealand
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Calix Receptor Edifice; Scrupulous Turn Off Fluorescent Sensor for Fe(III), Co(II) and Cu(II). J Fluoresc 2012; 22:1493-500. [DOI: 10.1007/s10895-012-1086-5] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2012] [Accepted: 06/20/2012] [Indexed: 10/28/2022]
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Rattray NJW, Zalloum WA, Mansell D, Latimer J, Schwalbe CH, Blake AJ, Bichenkova EV, Freeman S. Fluorescent probe for detection of bacteria: conformational trigger upon bacterial reduction of an azo bridge. Chem Commun (Camb) 2012; 48:6393. [PMID: 22618019 DOI: 10.1039/c2cc32521g] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/28/2024]
Abstract
Using biomimetic chemical reduction or Clostridium perfringens cell extract containing azoreductase, the dimer-fluorescent probe 2,4-O-bisdansyl-6,7-diazabicyclooct-6-ene, which possesses a conformationally constrained cis-azo bridge, is reduced to the tetra-equatorial 2,4-O-bisdansyl-cyclohexyl-3,5-bisammonium salt which exhibits fluorescence indicative of a dansyl monomer.
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Affiliation(s)
- Nicholas J W Rattray
- School of Pharmacy & Pharmaceutical Sciences, University of Manchester, Oxford Road, Manchester, M13 9PT, UK.
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Bishnoi A, Chawla HM, Pant N, Mrig S, Kumar S. Evaluation of the Radical Scavenging Activity of Resorcinarenes by DPPH• Free Radical Assay. JOURNAL OF CHEMICAL RESEARCH 2010. [DOI: 10.3184/030823410x12796983145491] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
A series of methyl-pendanted resorcinarene derivatives have been synthesised and evaluated for radical scavenging potential by using a colorimetric DPPH• assay to reveal their utility as potent radical scavengers. An evaluation of the efficiencies in relation to the number of DPPH• molecules reduced by one molecule of antioxidant establishes that resorcinarene can reduce approximately eight DPPH• molecules at a fairly lower stoichiometric concentration. This behaviour is compared to that of well known radical scavengers (α-tocopherol, BHT and resorcinol) frequently used as reference compounds in scientific evaluations.
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Affiliation(s)
- Anjali Bishnoi
- Department of Chemistry, Indian Institute of Technology, Hauz Khas, New Delhi-110016, India
| | - Har Mohindra Chawla
- Department of Chemistry, Indian Institute of Technology, Hauz Khas, New Delhi-110016, India
| | - Nalin Pant
- Department of Chemistry, Indian Institute of Technology, Hauz Khas, New Delhi-110016, India
| | - Sarika Mrig
- Department of Chemistry, Indian Institute of Technology, Hauz Khas, New Delhi-110016, India
| | - Satish Kumar
- Department of Chemistry, Indian Institute of Technology, Hauz Khas, New Delhi-110016, India
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Kageyama Y, Ohshima R, Sakurama K, Fujiwara Y, Tanimoto Y, Yamada Y, Aoki S. Photochemical cleavage reactions of 8-quinolinyl sulfonates in aqueous solution. Chem Pharm Bull (Tokyo) 2010; 57:1257-66. [PMID: 19881278 DOI: 10.1248/cpb.57.1257] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Photochemical cleavage reactions of 8-quinolinyl benzenesulfonate derivatives and related sulfonates in aqueous solutions are reported. The 8-quinolinyl benzenesulfonates undergo photolysis upon photoirradiation at 300-330 nm to give the corresponding 8-quinolinols and benzenesulfonic acids with the production of only negligible amounts of byproducts. The effects of substituent groups of the 8-quinolinyl moiety and the benzene ring on the photolysis reactions were examined. Based on steady-state mechanistic studies using a triplet sensitizer, a triplet quencher, and electron donors, it was suggested that the photolysis proceeds mainly via the homolytic cleavage of S-O bonds in the excited triplet state.
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Affiliation(s)
- Yoshiyuki Kageyama
- Faculty of Pharmaceutical Sciences, Tokyo University of Science, 2641 Yamazaki, Noda 278-8510, Japan
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Gruber T, Fischer C, Felsmann M, Seichter W, Weber E. Calix[4]arenes featuring a direct lower rim attachment of dansyl groups. Synthesis, fluorescence properties and first report on crystal structures. Org Biomol Chem 2009; 7:4904-17. [DOI: 10.1039/b911800d] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Pandey S, Azam A, Pandey S, Chawla HM. Novel dansyl-appended calix[4]arene frameworks: fluorescence properties and mercury sensing. Org Biomol Chem 2008; 7:269-79. [PMID: 19109671 DOI: 10.1039/b815379e] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Covalently-attached fluorophores may impart enhanced chemosensing capabilities to calixarene frameworks. Synthesis and characterization of six novel dansyl-appended calix[4]arenes, namely, H/Dan4, NO2/Dan4, H/(OH)2Dan2, H/(Ester)2(Dan)2, t-Bu/(OH)2Dan2, and t-Bu/(Ester)2Dan2, containing two or four dansyl moieties are reported. Among these, fluorescence intensity of NO2/Dan4 is observed to decrease significantly in the presence Hg2+ in the solution. Based on the decrease in fluorescence, a limit of detection for Hg2+ of 20 ppb is obtained. NO2/Dan4 as a chemosensing agent for Hg2+ shows excellent selectivity and adequate reversibility. Complexation of NO2/Dan4 with Hg2+ is investigated using fluorescence spectroscopy and is observed to be 2:1. The formation constant of (NO2/Dan4)2Hg2+ is estimated to be 5.2(+/- 0.8) x 10(10) M(-2) at ambient conditions. These observations are traced to the fact that while all other dansyl-appended calix[4]arenes show cone conformation in the solution, NO2/Dan4 is in the 1,3-alternate conformation. Stokes shift versus solvent orientational polarizability for NO2/Dan4 also indicates the difference in the ground- to excited-state dipole moment of this compound to be the maximum among all six, rendering it most sensitive to its environment. Fluorescence emission of NO2/Dan4 in nonpolar chloroform, polar-aprotic acetonitrile, and polar-protic ethanol is observed to be different than that of the rest of the dansyl-appended compounds as well.
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Affiliation(s)
- Shubha Pandey
- Department of Chemistry, Jamia Millia Islamia, New Delhi 110028, India
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Kalenius E, Kekäläinen T, Neitola R, Beyeh K, Rissanen K, Vainiotalo P. Size- and Structure-Selective Noncovalent Recognition of Saccharides by Tetraethyl and Tetraphenyl Resorcinarenes in the Gas Phase. Chemistry 2008; 14:5220-8. [DOI: 10.1002/chem.200800075] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Mäkinen M, Kalenius E, Neitola R, Rissanen K, Vainiotalo P. The complex formation of tetracyclohexylammonium C1-resorcinarene with various guests - an electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry study. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2008; 22:1377-1383. [PMID: 18381705 DOI: 10.1002/rcm.3522] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
The complex formation of a tetraammonium C1-resorcinarene (R+4HCl) was studied using electrospray ionization Fourier transform ion cyclotron resonance (ESI-FTICR) mass spectrometry. Although R+4HCl easily loses its counter ions in the ESI process, a neutral self-assembled structure with an intramolecular circular hydrogen-bonded 16-membered -N(+)-H ... X(-) ... H-N(+)- array with ammonium ion as the charge-giving species was observed in the gas phase. In addition to chloride, several other counter ions were also studied. The size and basicity of the counter ion as well as the size of the charge-giving cation strongly affected the gas-phase stability of the self-assembled system. H/D exchange experiments showed that the ammonium substituents in the apical position of R affect the hydrogen-bonding system in the resorcinarene. The complexation of the saturated dicarboxylic acids was found to depend on the length of the carbon chain. The rigidity of the molecular skeleton of the acid improved the complexation considerably. The orientation and position of the carboxylic groups also had an effect on the complexation and consequently enabled stereochemical differentiation of the acids. Mass spectrometric observations were supported by theoretical calculations.
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Affiliation(s)
- Marko Mäkinen
- University of Joensuu, Department of Chemistry, PO Box 111, 80101 Joensuu, Finland
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Raatikainen K, Huuskonen J, Kolehmainen E, Rissanen K. Molecular Pacman: Folding, Inclusion, and X-ray Structures of Tri- and Tetraamino Piperazine Cyclophanes. Chemistry 2008; 14:3297-305. [DOI: 10.1002/chem.200701862] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Busi S, Saxell H, Fröhlich R, Rissanen K. The role of cation⋯π interactions in capsule formation: co-crystals of resorcinarenes and alkyl ammonium salts. CrystEngComm 2008. [DOI: 10.1039/b809503e] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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