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Bogdanowicz P, Madaj J, Szweda P, Sikorski A, Samaszko-Fiertek J, Dmochowska B. Oxolane Ammonium Salts (Muscarine-Like)-Synthesis and Microbiological Activity. Int J Mol Sci 2024; 25:2368. [PMID: 38397044 PMCID: PMC10889796 DOI: 10.3390/ijms25042368] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Revised: 02/13/2024] [Accepted: 02/15/2024] [Indexed: 02/25/2024] Open
Abstract
Commercially available 2-deoxy-D-ribose was used to synthesize the appropriate oxolane derivative-(2R,3S)-2-(hydroxymethyl)oxolan-3-ol-by reduction and dehydration/cyclization in an acidic aqueous solution. Its monotosyl derivative, as a result of the quaternization reaction, allowed us to obtain eight new muscarine-type derivatives containing a quaternary nitrogen atom and a hydroxyl group linked to the oxolane ring. Their structure was fully confirmed by the results of NMR, MS and IR analyses. The crystal structure of the pyridinium derivative showed a high similarity of the conformation of the oxolane ring to previously published crystal structures of muscarine. Two reference strains of Gram-negative bacteria (Escherichia coli ATCC 25922 and Pseudomonas aeruginosa ATCC 27853), two reference strains of Gram-positive staphylococci (Staphylococcus aureus ATCC 25923 and Staphylococcus aureus ATCC 29213) and four reference strains of pathogenic yeasts of the genus Candida spp. (Candida albicans SC5314, Candida glabrata DSM 11226, Candida krusei DSM 6128 and Candida parapsilosis DSM 5784) were selected for the evaluation of the antimicrobial potential of the synthesized compounds. The derivative containing the longest (decyl) chain attached to the quaternary nitrogen atom turned out to be the most active.
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Affiliation(s)
- Patrycja Bogdanowicz
- Faculty of Chemistry, University of Gdansk, Wita Stwosza 63, 80-308 Gdansk, Poland; (P.B.); (J.M.); (A.S.); (J.S.-F.)
| | - Janusz Madaj
- Faculty of Chemistry, University of Gdansk, Wita Stwosza 63, 80-308 Gdansk, Poland; (P.B.); (J.M.); (A.S.); (J.S.-F.)
| | - Piotr Szweda
- Department of Pharmaceutical Technology and Biochemistry, Gdansk University of Technology, Gabriela Narutowicza Street 11/12, 80-233 Gdansk, Poland;
| | - Artur Sikorski
- Faculty of Chemistry, University of Gdansk, Wita Stwosza 63, 80-308 Gdansk, Poland; (P.B.); (J.M.); (A.S.); (J.S.-F.)
| | - Justyna Samaszko-Fiertek
- Faculty of Chemistry, University of Gdansk, Wita Stwosza 63, 80-308 Gdansk, Poland; (P.B.); (J.M.); (A.S.); (J.S.-F.)
| | - Barbara Dmochowska
- Faculty of Chemistry, University of Gdansk, Wita Stwosza 63, 80-308 Gdansk, Poland; (P.B.); (J.M.); (A.S.); (J.S.-F.)
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Cioc RC, Crockatt M, van der Waal JC, Bruijnincx PCA. The Interplay between Kinetics and Thermodynamics in Furan Diels-Alder Chemistry for Sustainable Chemicals Production. Angew Chem Int Ed Engl 2022; 61:e202114720. [PMID: 35014138 PMCID: PMC9304315 DOI: 10.1002/anie.202114720] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2021] [Indexed: 01/21/2023]
Abstract
Biomass-derived furanic platform molecules have emerged as promising building blocks for renewable chemicals and functional materials. To this aim, the Diels-Alder (DA) cycloaddition stands out as a versatile strategy to convert these renewable resources in highly atom-efficient ways. Despite nearly a century worth of examples of furan DA chemistry, clear structure-reactivity-stability relationships are still to be established. Detailed understanding of the intricate interplay between kinetics and thermodynamics in these very particular [4+2] cycloadditions is essential to push further development and truly expand the scope beyond the ubiquitous addend combinations of electron-rich furans and electron-deficient olefins. Herein, we provide pertinent examples of DA chemistry, taken from various fields, to highlight trends, establish correlations and answer open questions in the field with the aim to support future efforts in the sustainable chemicals and materials production.
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Affiliation(s)
- Răzvan C. Cioc
- Organic Chemistry and CatalysisDebye Institute for Nanomaterials ScienceFaculty of ScienceUtrecht UniversityUniversiteitsweg 993584 CGUtrechtThe Netherlands
| | - Marc Crockatt
- Department of Sustainable Process and Energy Systems, TNOLeeghwaterstraat 442628CADelftThe Netherlands
| | - Jan C. van der Waal
- Department of Sustainable Process and Energy Systems, TNOLeeghwaterstraat 442628CADelftThe Netherlands
| | - Pieter C. A. Bruijnincx
- Organic Chemistry and CatalysisDebye Institute for Nanomaterials ScienceFaculty of ScienceUtrecht UniversityUniversiteitsweg 993584 CGUtrechtThe Netherlands
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Cioc R, Crockatt M, Van der Waal JC, Bruijnincx P. The Interplay between Kinetics and Thermodynamics in Furan Diels‐Alder Chemistry for Sustainable Chemicals Production. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202114720] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Razvan Cioc
- Utrecht University: Universiteit Utrecht Chemistry NETHERLANDS
| | - Marc Crockatt
- TNO Sustainable Process and Energy Systems NETHERLANDS
| | | | - Pieter Bruijnincx
- Utrecht University Chemistry Universiteitsweg99Netherlands 3584 CG Utrecht NETHERLANDS
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Kühlborn J, Groß J, Opatz T. Making natural products from renewable feedstocks: back to the roots? Nat Prod Rep 2020; 37:380-424. [DOI: 10.1039/c9np00040b] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
This review highlights the utilization of biomass-derived building blocks in the total synthesis of natural products.
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Affiliation(s)
- Jonas Kühlborn
- Institute of Organic Chemistry
- Johannes Gutenberg University
- 55128 Mainz
- Germany
| | - Jonathan Groß
- Institute of Organic Chemistry
- Johannes Gutenberg University
- 55128 Mainz
- Germany
| | - Till Opatz
- Institute of Organic Chemistry
- Johannes Gutenberg University
- 55128 Mainz
- Germany
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Affiliation(s)
- Hoang M. Le
- Department of Chemistry and Center for New Directions in Organic Synthesis; Hanyang University; Sungdong-Gu 04763 Seoul South Korea
| | - Hung D. Mac
- Faculty of Chemistry; Vietnam National University-Hanoi University of Science; 19 Le Thanh Tong, Hoan Kiem Ha Noi Vietnam
| | - Chang Ho Oh
- Department of Chemistry and Center for New Directions in Organic Synthesis; Hanyang University; Sungdong-Gu 04763 Seoul South Korea
| | - Dung T. Do
- Faculty of Chemistry; Vietnam National University-Hanoi University of Science; 19 Le Thanh Tong, Hoan Kiem Ha Noi Vietnam
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Nödling AR, Möckel R, Tonner R, Hilt G. Lewis Acids as Activators in CBS-Catalysed Diels-Alder Reactions: Distortion Induced Lewis Acidity Enhancement of SnCl4. Chemistry 2016; 22:13171-80. [DOI: 10.1002/chem.201602394] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2016] [Indexed: 11/10/2022]
Affiliation(s)
- Alexander R. Nödling
- Fachbereich Chemie; Philipps-Universität Marburg; Hans-Meerwein-Straße 4 35032 Marburg Germany
| | - Robert Möckel
- Fachbereich Chemie; Philipps-Universität Marburg; Hans-Meerwein-Straße 4 35032 Marburg Germany
| | - Ralf Tonner
- Fachbereich Chemie; Philipps-Universität Marburg; Hans-Meerwein-Straße 4 35032 Marburg Germany
| | - Gerhard Hilt
- Fachbereich Chemie; Philipps-Universität Marburg; Hans-Meerwein-Straße 4 35032 Marburg Germany
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Foster RW, Benhamou L, Porter MJ, Bučar DK, Hailes HC, Tame CJ, Sheppard TD. Irreversible endo-selective diels-alder reactions of substituted alkoxyfurans: a general synthesis of endo-cantharimides. Chemistry 2015; 21:6107-14. [PMID: 25756502 PMCID: PMC4406157 DOI: 10.1002/chem.201406286] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2014] [Indexed: 11/29/2022]
Abstract
The [4+2] cycloaddition of 3-alkoxyfurans with N-substituted maleimides provides the first general route for preparing endo-cantharimides. Unlike the corresponding reaction with 3H furans, the reaction can tolerate a broad range of 2-substitued furans including alkyl, aromatic, and heteroaromatic groups. The cycloaddition products were converted into a range of cantharimide products with promising lead-like properties for medicinal chemistry programs. Furthermore, the electron-rich furans are shown to react with a variety of alternative dienophiles to generate 7-oxabicyclo[2.2.1]heptane derivatives under mild conditions. DFT calculations have been performed to rationalize the activation effect of the 3-alkoxy group on a furan Diels-Alder reaction.
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Affiliation(s)
- Robert W Foster
- Department of Chemistry, University College London, Christopher Ingold Laboratories20 Gordon Street, London, WC1H 0AJ (UK)
| | - Laure Benhamou
- Department of Chemistry, University College London, Christopher Ingold Laboratories20 Gordon Street, London, WC1H 0AJ (UK)
| | - Michael J Porter
- Department of Chemistry, University College London, Christopher Ingold Laboratories20 Gordon Street, London, WC1H 0AJ (UK)
| | - Dejan-Krešimir Bučar
- Department of Chemistry, University College London, Christopher Ingold Laboratories20 Gordon Street, London, WC1H 0AJ (UK)
| | - Helen C Hailes
- Department of Chemistry, University College London, Christopher Ingold Laboratories20 Gordon Street, London, WC1H 0AJ (UK)
| | - Christopher J Tame
- GlaxoSmithKline, Medicines Research CentreGunnels Wood Road, Stevenage, Herts, SG1 2NY (UK)
| | - Tom D Sheppard
- Department of Chemistry, University College London, Christopher Ingold Laboratories20 Gordon Street, London, WC1H 0AJ (UK)
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Abstract
This review covers pyrrolizidine alkaloids isolated from natural sources. Topics include: aspects of structure, isolation, and biological/pharmacological studies; total syntheses of necic acids, necine bases and closely-related non-natural analogues.
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Affiliation(s)
- Jeremy Robertson
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford, OX1 3TA, UK.
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Asta C, Schmidt D, Conrad J, Frey W, Beifuss U. Combination of enzyme- and Lewis acid-catalyzed reactions: a new method for the synthesis of 6,7-dihydrobenzofuran-4(5H)-ones starting from 2,5-dimethylfuran and 1,3-cyclohexanediones. Org Biomol Chem 2013; 11:5692-701. [DOI: 10.1039/c3ob40926k] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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Jung SH, Hwang GS, Lee SI, Ryu DH. Total synthsis of (+)-ambuic acid: α-bromination with 1,2-dibromotetrachloroethane. J Org Chem 2012; 77:2513-8. [PMID: 22280015 DOI: 10.1021/jo202357s] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Total synthesis of (+)-ambuic acid has been accomplished from the readily available stereocontrolled Diels-Alder adduct of cyclopentadiene and iodo-1,4-benzoquinone monoketal through an efficient series of steps. A new method for the highly commendable synthesis of α-brominated Diels-Alder adduct is described.
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Affiliation(s)
- Sun Hee Jung
- Department of Chemistry, Sungkyunkwan University, Suwon 440-746, Korea
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Lee SI, Moon SY, Hwang GS, Ryu DH. Facile Approach to Optically Active α-Alkylidene-β-amino Esters by Thermal Overman Rearrangement. Org Lett 2010; 12:3234-7. [DOI: 10.1021/ol1011746] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Sung Il Lee
- Department of Chemistry, Sungkyunkwan University, Suwon 440-746, Korea, and Korea Basic Science Institute and Graduate School of Analytical Science and Technology, Chungnam National University, Seoul, 136-713, Korea
| | - Soon Young Moon
- Department of Chemistry, Sungkyunkwan University, Suwon 440-746, Korea, and Korea Basic Science Institute and Graduate School of Analytical Science and Technology, Chungnam National University, Seoul, 136-713, Korea
| | - Geum-Sook Hwang
- Department of Chemistry, Sungkyunkwan University, Suwon 440-746, Korea, and Korea Basic Science Institute and Graduate School of Analytical Science and Technology, Chungnam National University, Seoul, 136-713, Korea
| | - Do Hyun Ryu
- Department of Chemistry, Sungkyunkwan University, Suwon 440-746, Korea, and Korea Basic Science Institute and Graduate School of Analytical Science and Technology, Chungnam National University, Seoul, 136-713, Korea
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Honda T. Development of Samarium Diiodide-Promoted Regioselective Carbon-Carbon Bond Cleavage Reaction of γ-Halo- and ε-Halo-α,β-unsaturated Carbonyl Compounds: Application to the Synthesis of Biologically Active Natural Products. HETEROCYCLES 2010. [DOI: 10.3987/rev-10-683] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Senapati B, Hwang GS, Lee S, Ryu D. Enantioselective Synthesis of β-Iodo Morita-Baylis-Hillman Esters by a Catalytic Asymmetric Three-Component Coupling Reaction. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200900351] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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14
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Senapati B, Hwang GS, Lee S, Ryu D. Enantioselective Synthesis of β-Iodo Morita-Baylis-Hillman Esters by a Catalytic Asymmetric Three-Component Coupling Reaction. Angew Chem Int Ed Engl 2009; 48:4398-401. [DOI: 10.1002/anie.200900351] [Citation(s) in RCA: 70] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Gao L, Hwang GS, Lee MY, Ryu DH. Catalytic enantioselective 1,3-dipolar cycloadditions of alkyl diazoacetates with α,β-disubstituted acroleins. Chem Commun (Camb) 2009:5460-2. [DOI: 10.1039/b910321j] [Citation(s) in RCA: 68] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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