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Shishkina SV, Shaposhnyk AM, Konovalova IS, Dyakonenko VV, Vaksler YO. Concomitant polymorphs of 2-imino-2H-chromene-3-carboxylic acid amide: experimental and quantum chemical study. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2024; 80:27-37. [PMID: 38205837 DOI: 10.1107/s2052520623010193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Accepted: 11/24/2023] [Indexed: 01/12/2024]
Abstract
2-Iminocoumarin-3-carboxamide (2-imino-2 H-chromene-3-carboxylic acid) is a perspective compound for use in the pharmaceutical industry. This compound crystallized from several solvents as two concomitant polymorphic forms. The monoclinic polymorph, crystallized initially, is formed due to strong N-H...O hydrogen bonds, weak C-H...O and C-H...N(π) hydrogen bonds, and stacking interactions of `head-to-head' type. The triclinic polymorphic form obtained due to slow evaporation of the same solution is formed due to only strong intermolecular interactions, N-H...O hydrogen bonds of two types, and stacking interactions of two types. Analysis of pairwise interaction energies showed that the monoclinic structure is columnar while the triclinic one is layered. Calculations in a periodic approximation of their lattice energies confirmed that the monoclinic polymorphic crystals are metastable as compared to the stable triclinic polymorph. Further quantum chemical modeling of possible structure deformations proved that both concomitant polymorphs can not be transformed into a new polymorphic form under external influence.
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Affiliation(s)
- Svitlana V Shishkina
- SSI "Institute for Single Crystals" NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine
| | - Anna M Shaposhnyk
- SSI "Institute for Single Crystals" NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine
| | - Irina S Konovalova
- SSI "Institute for Single Crystals" NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine
| | - Victoriya V Dyakonenko
- SSI "Institute for Single Crystals" NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine
| | - Yevhenii O Vaksler
- SSI "Institute for Single Crystals" NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine
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2
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Shishkina SV, Shaposhnik AM, Dyakonenko VV, Baumer VM, Rudiuk VV, Yanchuk IB, Levandovskiy IA. New Polymorphic Modifications of 6-Methyluracil: An Experimental and Quantum Chemical Study. ACS OMEGA 2023; 8:20661-20674. [PMID: 37323411 PMCID: PMC10268012 DOI: 10.1021/acsomega.3c01231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Accepted: 05/22/2023] [Indexed: 06/17/2023]
Abstract
Polymorphism of 6-methyluracil, which affects the regulation of lipid peroxidation and wound healing, has been studied by experimental and quantum chemical methods. Two known polymorphic modifications and two new crystalline forms were crystallized and characterized by single crystal and powder X-ray diffraction (XRD) methods as well as by the differential scanning calorimetry (DSC) method and infrared (IR) spectroscopy. The calculations of pairwise interaction energies between molecules and lattice energies in periodic boundary conditions have shown that the polymorphic form 6MU_I used in the pharmaceutical industry and two new forms 6MU_III and 6MU_IV, which can be formed due to temperature violations, may be considered as metastable. The centrosymmetric dimer bound by two N-H···O hydrogen bonds was recognized as a dimeric building unit in all of the polymorphic forms of 6-methyluracil. Four polymorphic forms have a layered structure from the viewpoint of interaction energies between dimeric building units. The layers parallel to the (100) crystallographic plane were recognized as a basic structural motif in the 6MU_I, 6MU_III, and 6MU_IV crystals. In the 6MU_II structure, a basic structural motif is a layer parallel to the (001) crystallographic plane. The ratio between the interaction energies within the basic structural motif and between neighboring layers correlates with the relative stability of the studied polymorphic forms. The most stable polymorphic form 6MU_II has the most anisotropic "energetic" structure, while the interaction energies in the least stable form 6MU_IV are very close in various directions. The modeling of shear deformations of layers in the metastable polymorphic structures has not revealed any possibility of these crystals to be deformed under external mechanical stress or pressure influence. These results allow the use of metastable polymorphic forms of 6-methyluracil in the pharmaceutical industry without any limitations.
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Affiliation(s)
- Svitlana V. Shishkina
- SSI
“Institute for Single Crystals” NAS of Ukraine, 60 Nauky Avenue, Kharkiv 61001, Ukraine
- V.
N. Karazin Kharkiv National University, 4 Svobody Sq., Kharkiv 61022, Ukraine
| | - Anna M. Shaposhnik
- SSI
“Institute for Single Crystals” NAS of Ukraine, 60 Nauky Avenue, Kharkiv 61001, Ukraine
| | | | - Vyacheslav M. Baumer
- SSI
“Institute for Single Crystals” NAS of Ukraine, 60 Nauky Avenue, Kharkiv 61001, Ukraine
| | | | | | - Igor A. Levandovskiy
- Department
of Organic Chemistry, National Technical
University of Ukraine “Igor Sikorsky Kyiv Polytechnic Institute”, 37 Pobedy Avenue, 03056 Kyiv, Ukraine
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3
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Vaksler Y, Hryhoriv HV, Kovalenko SM, Perekhoda LO, Georgiyants VA. Synthesis, X-ray diffraction study, analysis of intermolecular interactions and molecular docking of ethyl 1-(3-tosylquinolin-4-yl)piperidine-4-carboxylate. Acta Crystallogr E Crystallogr Commun 2022; 78:890-896. [PMID: 36072518 PMCID: PMC9443802 DOI: 10.1107/s2056989022007691] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Accepted: 07/30/2022] [Indexed: 11/16/2022]
Abstract
An easy synthetic route towards ethyl 1-(3-tosylquinolin-4-yl)piperidine-4-carboxylate was found. Its molecular and crystal structures are described as well and the biological activity is also predicted using molecular docking studies. The title compound, C24H26N2O4S, can be obtained via two synthetic routes. According to our investigations, the most suitable way is by the reaction of ethyl 2-bromoacetate with sodium tosylsulfinate in dry DMF. It was crystallized from methanol into the monoclinic P21/n space group with a single molecule in the asymmetric unit. Hirshfeld surface analysis was performed to define the hydrogen bonds and analysis of the two-dimensional fingerprint plots was used to distinguish the different types of interactions. Two very weak non-classical C—H⋯O hydrogen bonds were found and the contributions of short contacts to the Hirshfeld surface were determined. Molecules form an isotropic network of intermolecular interactions according to an analysis of the pairwise interaction energies. A molecular docking study evaluated the interactions in the title compound with the active centers of macromolecules of bacterial targets (Staphylococcus aureus DNA Gyrase PDB ID: 2XCR, Mycobacterium tuberculosis topoisomerase II PDB ID: 5BTL, Streptococcus pneumoniae topoisomerase IV PDB ID: 4KPF) and revealed high affinity towards them that exceeded the reference antibiotics of the fluoroquinolone group.
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Konovalova IS, Shaposhnyk AM, Baumer VN, Chalyk BA, Shishkina SV. Polymorphic transition due to grinding: the case of 3-[1-(tert-butoxycarbonyl)azetidin-3-yl]-1,2-oxazole-4-carboxylic acid. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2022; 78:510-519. [PMID: 35702968 DOI: 10.1107/s2052520622003900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2021] [Accepted: 04/10/2022] [Indexed: 06/15/2023]
Abstract
A polymorphic transition as a result of grinding was found for 3-[1-(tert-butoxycarbonyl)azetidin-3-yl]-1,2-oxazole-4-carboxylic acid. The thorough study of polymorphic structures before and after crystal structure transformation has revealed some pre-conditions for a polymorphic transition and regularities of changes in molecular and crystal structure. In metastable polymorph 1a, the conformationally flexible molecule adopts a conformation with the higher energy and forms a less preferable linear supramolecular synthon. Additional energy imparted to a crystal structure during the grinding process proved to be enough to overcome low energy barriers for the nitrogen inversion and rotation of the oxazole ring around the sp3-sp2 single bond. As a result, polymorph 1b with a molecule adopting conformation with lower energy and forming a more preferable centrosymmetric supramolecular synthon was obtained. The study of pairwise interaction energies in the two polymorphs has shown that metastable polymorph 1a is organized by molecular building units and has a columnar-layered structure. A centrosymmetric dimer should be recognized as a complex building unit in more stable polymorph 1b, which has a layered structure.
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Affiliation(s)
- Irina S Konovalova
- SSI `Institute for Single Crystals' NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine
| | - Anna M Shaposhnyk
- SSI `Institute for Single Crystals' NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine
| | - Vyacheslav N Baumer
- SSI `Institute for Single Crystals' NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine
| | | | - Svitlana V Shishkina
- SSI `Institute for Single Crystals' NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine
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5
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Vaksler YA, Idrissi A, Shishkina SV. Is it possible to predict the stability of a crystal structure under the influence of pressure? Quantum chemical study of ibuprofen crystals. NEW J CHEM 2022. [DOI: 10.1039/d1nj05780d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Quantum chemical modeling was used to analyze the crystalline structure of ibuprofen under atmospheric pressure to determine the structural features, providing its stability under pressure.
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Affiliation(s)
- Yevhenii A. Vaksler
- SSI “Institute for Single Crystals” National Academy of Science of Ukraine, 60 Nauky Ave., Kharkiv, 61001, Ukraine
- V. N. Karazin Kharkiv National University, 4 Svobody Sq., Kharkiv 61077, Ukraine
- Laboratoire de Spectroscopie Pour Les Interactions, La Réactivité et L’environnement (UMR CNRS A8516), Université de Lille, 59655, Villeneuve d’Ascq Cedex, France
| | - Abdenacer Idrissi
- Laboratoire de Spectroscopie Pour Les Interactions, La Réactivité et L’environnement (UMR CNRS A8516), Université de Lille, 59655, Villeneuve d’Ascq Cedex, France
| | - Svitlana V. Shishkina
- SSI “Institute for Single Crystals” National Academy of Science of Ukraine, 60 Nauky Ave., Kharkiv, 61001, Ukraine
- V. N. Karazin Kharkiv National University, 4 Svobody Sq., Kharkiv 61077, Ukraine
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6
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Shishkina SV, Dyakonenko VV, Shishkin OV, Semynozhenko VP, Bogashchenko TY, Lyapunov AY, Kirichenko TI. Halogen…π interactions in the complexes of fluorenonophane with haloforms. Struct Chem 2021. [DOI: 10.1007/s11224-021-01839-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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7
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Medviediev V, Shishkina S, Ribalka AO, Zaręba JK, Drozd M, Daszkiewicz M. Revisiting 2-chloro-4-nitroaniline: analysis of intricate supramolecular ordering of a triclinic polymorph featuring a high Z value and strong second harmonic generation. CrystEngComm 2020. [DOI: 10.1039/d0ce00582g] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
A new polymorph of 2-chloro-4-nitroaniline is more stable than its 55 year-old antecedent.
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Affiliation(s)
- Volodymyr Medviediev
- Institute of Low Temperature and Structure Research
- Polish Academy of Sciences
- 50-422 Wrocław
- Poland
| | - Svitlana Shishkina
- SSI “Institute for Single Crystals”
- National Academy of Science of Ukraine
- Kharkiv 61001
- Ukraine
- V. N. Karazin Kharkiv National University
| | - A. O. Ribalka
- V. N. Karazin Kharkiv National University
- Kharkiv 61077
- Ukraine
| | - Jan K. Zaręba
- Advanced Materials Engineering and Modelling Group
- Faculty of Chemistry
- Wroclaw University of Science and Technology
- 50-370 Wrocław
- Poland
| | - Marek Drozd
- Institute of Low Temperature and Structure Research
- Polish Academy of Sciences
- 50-422 Wrocław
- Poland
| | - Marek Daszkiewicz
- Institute of Low Temperature and Structure Research
- Polish Academy of Sciences
- 50-422 Wrocław
- Poland
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9
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Konovalova IS, Shishkina SV, Bani-Khaled G, Muzyka EN, Boyko AN. Intermolecular interactions in crystals of benzene and its mono- and dinitro derivatives: study from the energetic viewpoint. CrystEngComm 2019. [DOI: 10.1039/c8ce02099j] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The weak intermolecular interactions and their role in mono- and dinitrobenzene crystal structure formation have been studied using quantum-chemical calculations.
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Affiliation(s)
- Irina S. Konovalova
- SSI “Institute for Single Crystals” National Academy of Science of Ukraine
- Kharkiv
- Ukraine
- National University of Radio Electronics
- Kharkiv
| | - Svitlana V. Shishkina
- SSI “Institute for Single Crystals” National Academy of Science of Ukraine
- Kharkiv
- Ukraine
- National University of Radio Electronics
- Kharkiv
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10
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Shishkina SV, Konovalova IS, Shishkin OV, Boyko AN. Acceptor properties of amino groups in aminobenzene crystals: study from the energetic viewpoint. CrystEngComm 2017. [DOI: 10.1039/c7ce01382e] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The role of the N–H⋯N hydrogen bonds in the organization of the crystals of the aniline and diaminobenzenes has been studied.
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Affiliation(s)
- Svitlana V. Shishkina
- SSI “Institute for Single Crystals”
- National Academy of Science of Ukraine
- Kharkiv
- Ukraine
- Department of Inorganic Chemistry
| | - Irina S. Konovalova
- SSI “Institute for Single Crystals”
- National Academy of Science of Ukraine
- Kharkiv
- Ukraine
| | - Oleg V. Shishkin
- SSI “Institute for Single Crystals”
- National Academy of Science of Ukraine
- Kharkiv
- Ukraine
- Department of Inorganic Chemistry
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11
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Effects of the crystal structure and thermodynamic stability on solubility of bioactive compounds: DFT study of isoniazid cocrystals. COMPUT THEOR CHEM 2016. [DOI: 10.1016/j.comptc.2016.07.022] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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12
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Dolgushin FM, Smol’yakov AF, Suponitsky KY, Vologzhanina AV, Fedyanin IV, Shishkina SV. Intermolecular interactions in polymorphs of the cyclic trimeric perfluoro-ortho-phenylene mercury from geometric, energetic and AIM viewpoints: DFT study and Hirshfeld surface analysis. Struct Chem 2015. [DOI: 10.1007/s11224-015-0646-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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13
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Jin X, Xu CX, Yin X, He P, Zhang JG. A 1D cadmium complex with 3,4-diamino-1,2,4-triazole as ligand: synthesis, molecular structure, characterization, and theoretical studies. J COORD CHEM 2015. [DOI: 10.1080/00958972.2015.1029465] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Xin Jin
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Cai-Xia Xu
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Xin Yin
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Piao He
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Jian-Guo Zhang
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
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14
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Jin X, Zhang JG, Xu CX, Yin X, He P, Qin Q. Eco-friendly energetic complexes based on transition metal nitrates and 3,4-diamino-1,2,4-triazole (DATr). J COORD CHEM 2014. [DOI: 10.1080/00958972.2014.960862] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- Xin Jin
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Jian-Guo Zhang
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Cai-Xia Xu
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Xin Yin
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Piao He
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
| | - Qian Qin
- State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing, China
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15
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Panini P, Venugopala KN, Odhav B, Chopra D. Polymorphism in two biologically active dihydropyrimidinium hydrochloride derivatives: quantitative inputs towards the energetics associated with crystal packing. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2014; 70:681-696. [PMID: 25080247 DOI: 10.1107/s2052520614006209] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2013] [Accepted: 03/20/2014] [Indexed: 06/03/2023]
Abstract
A new polymorph belonging to the tetrahydropyrimidinium class of compounds, namely 6-(4-chlorophenyl)-5-(methoxycarbonyl)-4-methyl-2-(3-(trifluoromethylthio)phenylamino)-3,6-dihydropyrimidin-1-ium chloride, and a hydrate of 2-(3-bromophenylamino)-6-(4-chlorophenyl)-5-(methoxycarbonyl)-4-methyl-3,6-dihydropyrimidin-1-ium chloride, have been isolated and characterized using single-crystal X-ray diffraction (XRD). A detailed comprehensive analysis of the crystal packing in terms of the associated intermolecular interactions and a quantification of their interaction energies have been performed for both forms of the two different organic salts (A and B) using X-ray crystallography and computational methods such as density functional theory (DFT) quantum mechanical calculations, PIXEL lattice-energy calculations (with decomposition of total lattice energy into the Coulombic, polarization, dispersion and repulsion contribution), the calculation of the Madelung constant (the EUGEN method), Hirshfeld and two-dimensional fingerprint plots. The presence of ionic [N-H](+)···Cl(-) and [C-H](+)···Cl(-) hydrogen bonds mainly stabilizes the crystal packing in both forms A and B, while in the case of B·H2O [N-H](+)···O(water) and O(water)-H···Cl(-) hydrogen bonds along with [N-H](+)···Cl(-) and [C-H](+)···Cl(-) provide stability to the crystal packing. The lattice-energy calculations from both PIXEL and EUGEN methods revealed that in the case of A, form (I) (monoclinic) is more stable whereas for B it is the anhydrous form that is more stable. The analysis of the `Madelung mode' of crystal packing of two forms of A and B and its hydrates suggest that differences exist in the position of the charged ions/atoms in the organic solid state. The R/E (distance-energy) plots for all the crystal structures show that the molecular pairs in their crystal packing are connected with either highly stabilizing (due to the presence of organic R(+) and Cl(-)) or highly destabilizing Coulombic contacts. The difference in crystal packing and associated intermolecular interactions between polymorphs (in the case of A) or the hydrates (in the case of B) have been clearly elucidated by the analysis of Hirshfeld surfaces and two-dimensional fingerprint plots. The relative contributions of the various interactions to the Hirshfeld surface for the cationic (dihydropyrimidinium) part and anionic (chloride ion) part for the two forms of A and B and its hydrate were observed to be different.
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Affiliation(s)
- Piyush Panini
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Madhya Pradesh 462066, India
| | - K N Venugopala
- Department of Biotechnology and Food Technology, Durban University of Technology, Durban 4001, South Africa
| | - Bharti Odhav
- Department of Biotechnology and Food Technology, Durban University of Technology, Durban 4001, South Africa
| | - Deepak Chopra
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Madhya Pradesh 462066, India
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16
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Investigation of topology of intermolecular interactions in the benzene–acetylene co-crystal by different theoretical methods. Struct Chem 2014. [DOI: 10.1007/s11224-014-0413-7] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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17
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Panini P, Venugopala KN, Odhav B, Chopra D. Quantitative Analysis of Intermolecular Interactions in 7-Hydroxy-4-methyl-2H-chromen-2-one and Its Hydrate. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES INDIA SECTION A-PHYSICAL SCIENCES 2014. [DOI: 10.1007/s40010-014-0143-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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18
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Zubatyuk RI, Sinelshchikova AA, Enakieva YY, Gorbunova YG, Tsivadze AY, Nefedov SE, Bessmertnykh-Lemeune A, Guilard R, Shishkin OV. Insights into the crystal packing of phosphorylporphyrins based on the topology of their intermolecular interaction energies. CrystEngComm 2014. [DOI: 10.1039/c4ce01623h] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Principal features of crystal packing for the series of complexes were revealed by computational approach.
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Affiliation(s)
- Roman I. Zubatyuk
- SSI “Institute for Single Crystals” National Academy of Science of Ukraine
- Kharkiv 61001, Ukraine
| | - Anna A. Sinelshchikova
- A.N. Frumkin Institute of Physical Chemistry and Electrochemistry
- Russian Academy of Sciences
- Moscow, Russia
| | - Yulia Y. Enakieva
- A.N. Frumkin Institute of Physical Chemistry and Electrochemistry
- Russian Academy of Sciences
- Moscow, Russia
| | - Yulia G. Gorbunova
- A.N. Frumkin Institute of Physical Chemistry and Electrochemistry
- Russian Academy of Sciences
- Moscow, Russia
- N.S. Kurnakov Institute of General and Inorganic Chemistry
- Russian Academy of Sciences
| | - Aslan Y. Tsivadze
- A.N. Frumkin Institute of Physical Chemistry and Electrochemistry
- Russian Academy of Sciences
- Moscow, Russia
- N.S. Kurnakov Institute of General and Inorganic Chemistry
- Russian Academy of Sciences
| | - Sergey E. Nefedov
- N.S. Kurnakov Institute of General and Inorganic Chemistry
- Russian Academy of Sciences
- Moscow, Russia
| | | | - Roger Guilard
- Université de Bourgogne
- ICMUB (UMR CNRS 6302)
- 21078 Dijon Cedex, France
| | - Oleg V. Shishkin
- SSI “Institute for Single Crystals” National Academy of Science of Ukraine
- Kharkiv 61001, Ukraine
- V.N. Karazin Kharkiv National University
- Kharkiv 61202, Ukraine
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19
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Shishkin OV, Zubatyuk RI, Shishkina SV, Dyakonenko VV, Medviediev VV. Role of supramolecular synthons in the formation of the supramolecular architecture of molecular crystals revisited from an energetic viewpoint. Phys Chem Chem Phys 2014; 16:6773-86. [DOI: 10.1039/c3cp55390f] [Citation(s) in RCA: 57] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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20
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Shishkin OV, Medvediev VV, Zubatyuk RI. Supramolecular architecture of molecular crystals possessing shearing mechanical properties: columns versus layers. CrystEngComm 2013. [DOI: 10.1039/c2ce26126j] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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21
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Maria TM, Ermelinda S. Eusébio M, Almeida e Silva J, Sobral AJ, Cardoso C, Paixão J, Ramos Silva M. 2-Quinolinecarboxaldehyde: Polymorphic behavior of a small rigid molecule. J Mol Struct 2012. [DOI: 10.1016/j.molstruc.2012.07.009] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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22
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Shishkin OV, Shishkina SV, Maleev AV, Zubatyuk RI, Vasylyeva V, Merz K. Influence of Deuteration and Fluorination on the Supramolecular Architecture of Pyridine N‐Oxide Crystals. Chemphyschem 2012; 14:847-56. [DOI: 10.1002/cphc.201200581] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2012] [Revised: 08/11/2012] [Indexed: 11/08/2022]
Affiliation(s)
- Oleg V. Shishkin
- Division of Functional Materials Chemistry, SSI “Institute for Single Crystals”, National Academy of Science of Ukraine, 60 Lenina ave., Kharkiv, 61001 (Ukraine)
- Department of Inorganic Chemistry, V. N. Karazin Kharkiv National University, 4 Svobody sq., Kharkiv 61122 (Ukraine)
| | - Svitlana V. Shishkina
- Division of Functional Materials Chemistry, SSI “Institute for Single Crystals”, National Academy of Science of Ukraine, 60 Lenina ave., Kharkiv, 61001 (Ukraine)
| | - Andrey V. Maleev
- Vladimir State University, 87 Gorky str., Vladimir, 600000 (Russian Federation)
| | - Roman I. Zubatyuk
- Division of Functional Materials Chemistry, SSI “Institute for Single Crystals”, National Academy of Science of Ukraine, 60 Lenina ave., Kharkiv, 61001 (Ukraine)
| | - Vera Vasylyeva
- Inorganic Chemistry I, Ruhr‐University Bochum, Universitaetstrasse 150, 44801 Bochum (Germany)
| | - Klaus Merz
- Inorganic Chemistry I, Ruhr‐University Bochum, Universitaetstrasse 150, 44801 Bochum (Germany)
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Brittain HG. Polymorphism and Solvatomorphism 2010. J Pharm Sci 2012; 101:464-84. [DOI: 10.1002/jps.22788] [Citation(s) in RCA: 103] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2011] [Revised: 09/18/2011] [Accepted: 09/22/2011] [Indexed: 01/06/2023]
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Shishkin OV, Medvediev VV, Zubatyuk RI, Shyshkina OO, Kovalenko NV, Volovenko JM. Role of different molecular fragments in formation of the supramolecular architecture of the crystal of 1,1-dioxo-tetrahydro-1λ6-thiopyran-3-one. CrystEngComm 2012. [DOI: 10.1039/c2ce26332g] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Shishkin OV, Dyakonenko VV, Maleev AV. Supramolecular architecture of crystals of fused hydrocarbons based on topology of intermolecular interactions. CrystEngComm 2012. [DOI: 10.1039/c2ce06336k] [Citation(s) in RCA: 74] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Konovalova IS, Nelyubina YV, Lyssenko KA, Paponov BV, Shishkin OV. Intra- and Intermolecular Interactions in the Crystals of 3,4-Diamino-1,2,4-triazole and Its 5-Methyl Derivative. Experimental and Theoretical Investigations of Charge Density Distribution. J Phys Chem A 2011; 115:8550-62. [DOI: 10.1021/jp203732h] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Shishkin OV, Dyakonenko VV, Maleev AV, Schollmeyer D, Vysotsky MO. Columnar supramolecular architecture of crystals of 2-(4-Iodophenyl)-1,10-phenanthroline derived from values of intermolecular interaction energy. CrystEngComm 2011. [DOI: 10.1039/c0ce00246a] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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