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For: Zhou K, Peters RJ. Electrostatic effects on (di)terpene synthase product outcome. Chem Commun (Camb) 2011;47:4074-80. [PMID: 21305070 DOI: 10.1039/c0cc02960b] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Number Cited by Other Article(s)
1
Schwartz R, Zev S, Major DT. Mechanistic docking in terpene synthases using EnzyDock. Methods Enzymol 2024;699:265-292. [PMID: 38942507 DOI: 10.1016/bs.mie.2024.04.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/30/2024]
2
Leferink NGH, Escorcia AM, Ouwersloot BR, Johanissen LO, Hay S, van der Kamp MW, Scrutton NS. Molecular Determinants of Carbocation Cyclisation in Bacterial Monoterpene Synthases. Chembiochem 2022;23:e202100688. [PMID: 35005823 PMCID: PMC9303655 DOI: 10.1002/cbic.202100688] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 01/07/2022] [Indexed: 11/24/2022]
3
Xu J, Peng G, Xu J, Li Y, Tong L, Yang D. Probing of the plasticity of the active site in pinene synthase elucidates its potential evolutionary mechanism. PHYTOCHEMISTRY 2021;181:112573. [PMID: 33142148 DOI: 10.1016/j.phytochem.2020.112573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Revised: 10/19/2020] [Accepted: 10/22/2020] [Indexed: 06/11/2023]
4
Raz K, Driller R, Dimos N, Ringel M, Brück T, Loll B, Major DT. The Impression of a Nonexisting Catalytic Effect: The Role of CotB2 in Guiding the Complex Biosynthesis of Cyclooctat-9-en-7-ol. J Am Chem Soc 2020;142:21562-21574. [PMID: 33289561 DOI: 10.1021/jacs.0c11348] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
5
Tasnim S, Gries R, Mattsson J. Identification of Three Monofunctional Diterpene Synthases with Specific Enzyme Activities Expressed during Heartwood Formation in Western Redcedar (Thuja plicata) Trees. PLANTS (BASEL, SWITZERLAND) 2020;9:E1018. [PMID: 32806789 PMCID: PMC7464036 DOI: 10.3390/plants9081018] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Revised: 08/08/2020] [Accepted: 08/09/2020] [Indexed: 11/28/2022]
6
Raz K, Levi S, Gupta PK, Major DT. Enzymatic control of product distribution in terpene synthases: insights from multiscale simulations. Curr Opin Biotechnol 2020;65:248-258. [PMID: 32679412 DOI: 10.1016/j.copbio.2020.06.002] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Revised: 06/03/2020] [Accepted: 06/07/2020] [Indexed: 11/25/2022]
7
Syntrivanis LD, Némethová I, Schmid D, Levi S, Prescimone A, Bissegger F, Major DT, Tiefenbacher K. Four-Step Access to the Sesquiterpene Natural Product Presilphiperfolan-1β-ol and Unnatural Derivatives via Supramolecular Catalysis. J Am Chem Soc 2020;142:5894-5900. [DOI: 10.1021/jacs.0c01464] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
8
Jia M, Zhang Y, Siegel JB, Tantillo DJ, Peters RJ. Switching on a Nontraditional Enzymatic Base - Deprotonation by Serine in the ent-Kaurene Synthase from Bradyrhizobium japonicum. ACS Catal 2019;9:8867-8871. [PMID: 32489716 DOI: 10.1021/acscatal.9b02783] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
9
A Wheat β-Patchoulene Synthase Confers Resistance Against Herbivory in Transgenic Arabidopsis. Genes (Basel) 2019;10:genes10060441. [PMID: 31185680 PMCID: PMC6628343 DOI: 10.3390/genes10060441] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2019] [Revised: 05/27/2019] [Accepted: 06/04/2019] [Indexed: 01/11/2023]  Open
10
van Rijn JPM, Escorcia AM, Thiel W. QM/MM study of the taxadiene synthase mechanism. J Comput Chem 2019;40:1902-1910. [DOI: 10.1002/jcc.25846] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2019] [Revised: 04/05/2019] [Accepted: 04/15/2019] [Indexed: 01/10/2023]
11
Driller R, Janke S, Fuchs M, Warner E, Mhashal AR, Major DT, Christmann M, Brück T, Loll B. Towards a comprehensive understanding of the structural dynamics of a bacterial diterpene synthase during catalysis. Nat Commun 2018;9:3971. [PMID: 30266969 PMCID: PMC6162201 DOI: 10.1038/s41467-018-06325-8] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2018] [Accepted: 08/28/2018] [Indexed: 11/24/2022]  Open
12
Jia M, O’Brien TE, Zhang Y, Siegel JB, Tantillo DJ, Peters RJ. Changing Face: A Key Residue for the Addition of Water by Sclareol Synthase. ACS Catal 2018;8:3133-3137. [PMID: 29713562 DOI: 10.1021/acscatal.8b00121] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
13
Escorcia AM, van Rijn JPM, Cheng GJ, Schrepfer P, Brück TB, Thiel W. Molecular dynamics study of taxadiene synthase catalysis. J Comput Chem 2018;39:1215-1225. [PMID: 29450907 DOI: 10.1002/jcc.25184] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2017] [Revised: 01/25/2018] [Accepted: 01/26/2018] [Indexed: 01/10/2023]
14
Freud Y, Ansbacher T, Major DT. Catalytic Control in the Facile Proton Transfer in Taxadiene Synthase. ACS Catal 2017. [DOI: 10.1021/acscatal.7b02824] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
15
Major DT. Electrostatic Control of Chemistry in Terpene Cyclases. ACS Catal 2017. [DOI: 10.1021/acscatal.7b01328] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
16
Hare SR, Pemberton RP, Tantillo DJ. Navigating Past a Fork in the Road: Carbocation-π Interactions Can Manipulate Dynamic Behavior of Reactions Facing Post-Transition-State Bifurcations. J Am Chem Soc 2017;139:7485-7493. [PMID: 28504880 DOI: 10.1021/jacs.7b01042] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
17
Xu J, Ai Y, Wang J, Xu J, Zhang Y, Yang D. Converting S-limonene synthase to pinene or phellandrene synthases reveals the plasticity of the active site. PHYTOCHEMISTRY 2017;137:34-41. [PMID: 28215610 DOI: 10.1016/j.phytochem.2017.02.017] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2016] [Revised: 01/25/2017] [Accepted: 02/11/2017] [Indexed: 05/27/2023]
18
Jia M, Zhou K, Tufts S, Schulte S, Peters RJ. A Pair of Residues That Interactively Affect Diterpene Synthase Product Outcome. ACS Chem Biol 2017;12:862-867. [PMID: 28170228 PMCID: PMC5360158 DOI: 10.1021/acschembio.6b01075] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
19
Dixit M, Weitman M, Gao J, Major DT. Chemical Control in the Battle against Fidelity in Promiscuous Natural Product Biosynthesis: The Case of Trichodiene Synthase. ACS Catal 2017;7:812-818. [PMID: 29399379 PMCID: PMC5793923 DOI: 10.1021/acscatal.6b02584] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
20
Chemistry and Bioactivity of ent -Kaurene Diterpenoids. STUDIES IN NATURAL PRODUCTS CHEMISTRY 2017. [DOI: 10.1016/b978-0-444-63929-5.00005-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
21
Jia M, Peters RJ. Extending a Single Residue Switch for Abbreviating Catalysis in Plant ent-Kaurene Synthases. FRONTIERS IN PLANT SCIENCE 2016;7:1765. [PMID: 27920791 PMCID: PMC5118566 DOI: 10.3389/fpls.2016.01765] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2016] [Accepted: 11/09/2016] [Indexed: 05/23/2023]
22
Li Z, Gao R, Hao Q, Zhao H, Cheng L, He F, Liu L, Liu X, Chou WKW, Zhu H, Cane DE. The T296V Mutant of Amorpha-4,11-diene Synthase Is Defective in Allylic Diphosphate Isomerization but Retains the Ability To Cyclize the Intermediate (3R)-Nerolidyl Diphosphate to Amorpha-4,11-diene. Biochemistry 2016;55:6599-6604. [PMID: 27933789 DOI: 10.1021/acs.biochem.6b01004] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
23
Identification of amino acid networks governing catalysis in the closed complex of class I terpene synthases. Proc Natl Acad Sci U S A 2016;113:E958-67. [PMID: 26842837 DOI: 10.1073/pnas.1519680113] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
24
Schifrin A, Khatri Y, Kirsch P, Thiel V, Schulz S, Bernhardt R. A single terpene synthase is responsible for a wide variety of sesquiterpenes in Sorangium cellulosum Soce56. Org Biomol Chem 2016;14:3385-93. [DOI: 10.1039/c6ob00130k] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
25
Plant diterpene synthases: exploring modularity and metabolic diversity for bioengineering. Trends Biotechnol 2015;33:419-28. [DOI: 10.1016/j.tibtech.2015.04.006] [Citation(s) in RCA: 101] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2015] [Revised: 04/15/2015] [Accepted: 04/16/2015] [Indexed: 11/22/2022]
26
Frister T, Hartwig S, Alemdar S, Schnatz K, Thöns L, Scheper T, Beutel S. Characterisation of a Recombinant Patchoulol Synthase Variant for Biocatalytic Production of Terpenes. Appl Biochem Biotechnol 2015;176:2185-201. [DOI: 10.1007/s12010-015-1707-y] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2015] [Accepted: 06/08/2015] [Indexed: 01/08/2023]
27
Zhu L, Huang SH, Yu J, Hong R. Constructive innovation of approaching bicyclo[3.2.1]octane in ent-kauranoids. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2014.11.035] [Citation(s) in RCA: 57] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
28
Gonzalez V, Touchet S, Grundy DJ, Faraldos JA, Allemann RK. Evolutionary and Mechanistic Insights from the Reconstruction of α-Humulene Synthases from a Modern (+)-Germacrene A Synthase. J Am Chem Soc 2014;136:14505-12. [DOI: 10.1021/ja5066366] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
29
Catalytic control in terpenoid cyclases: multiscale modeling of thermodynamic, kinetic, and dynamic effects. Curr Opin Chem Biol 2014;21:25-33. [DOI: 10.1016/j.cbpa.2014.03.010] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2014] [Accepted: 03/09/2014] [Indexed: 02/08/2023]
30
Jackson AJ, Hershey DM, Chesnut T, Xu M, Peters RJ. Biochemical characterization of the castor bean ent-kaurene synthase(-like) family supports quantum chemical view of diterpene cyclization. PHYTOCHEMISTRY 2014;103:13-21. [PMID: 24810014 PMCID: PMC4062354 DOI: 10.1016/j.phytochem.2014.04.005] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2014] [Revised: 04/04/2014] [Accepted: 04/10/2014] [Indexed: 05/20/2023]
31
Potter K, Criswell J, Zi J, Stubbs A, Peters RJ. Novel Product Chemistry from Mechanistic Analysis of ent ‐Copalyl Diphosphate Synthases from Plant Hormone Biosynthesis. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201402911] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
32
Potter K, Criswell J, Zi J, Stubbs A, Peters RJ. Novel product chemistry from mechanistic analysis of ent-copalyl diphosphate synthases from plant hormone biosynthesis. Angew Chem Int Ed Engl 2014;53:7198-202. [PMID: 24862907 DOI: 10.1002/anie.201402911] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2014] [Revised: 04/08/2014] [Indexed: 11/08/2022]
33
Hong YJ, Tantillo DJ. Biosynthetic consequences of multiple sequential post-transition-state bifurcations. Nat Chem 2014;6:104-11. [PMID: 24451585 DOI: 10.1038/nchem.1843] [Citation(s) in RCA: 118] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2013] [Accepted: 12/05/2013] [Indexed: 11/09/2022]
34
Zi J, Mafu S, Peters RJ. To gibberellins and beyond! Surveying the evolution of (di)terpenoid metabolism. ANNUAL REVIEW OF PLANT BIOLOGY 2014;65:259-86. [PMID: 24471837 PMCID: PMC4118669 DOI: 10.1146/annurev-arplant-050213-035705] [Citation(s) in RCA: 180] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
35
Zerbe P, Hamberger B, Yuen MM, Chiang A, Sandhu HK, Madilao LL, Nguyen A, Hamberger B, Bach SS, Bohlmann J. Gene discovery of modular diterpene metabolism in nonmodel systems. PLANT PHYSIOLOGY 2013;162:1073-91. [PMID: 23613273 PMCID: PMC3668041 DOI: 10.1104/pp.113.218347] [Citation(s) in RCA: 112] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2013] [Accepted: 04/21/2013] [Indexed: 05/18/2023]
36
Nguyen QNN, Tantillo DJ. Caryolene-forming carbocation rearrangements. Beilstein J Org Chem 2013;9:323-31. [PMID: 23503674 PMCID: PMC3596059 DOI: 10.3762/bjoc.9.37] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2012] [Accepted: 01/21/2013] [Indexed: 11/23/2022]  Open
37
Criswell J, Potter K, Shephard F, Beale MH, Peters RJ. A single residue change leads to a hydroxylated product from the class II diterpene cyclization catalyzed by abietadiene synthase. Org Lett 2012;14:5828-31. [PMID: 23167845 DOI: 10.1021/ol3026022] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
38
Gao Y, Honzatko RB, Peters RJ. Terpenoid synthase structures: a so far incomplete view of complex catalysis. Nat Prod Rep 2012;29:1153-75. [PMID: 22907771 PMCID: PMC3448952 DOI: 10.1039/c2np20059g] [Citation(s) in RCA: 244] [Impact Index Per Article: 20.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
39
Zu L, Xu M, Lodewyk MW, Cane DE, Peters RJ, Tantillo DJ. Effect of isotopically sensitive branching on product distribution for pentalenene synthase: support for a mechanism predicted by quantum chemistry. J Am Chem Soc 2012;134:11369-71. [PMID: 22738258 DOI: 10.1021/ja3043245] [Citation(s) in RCA: 77] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
40
Zhou K, Gao Y, Hoy JA, Mann FM, Honzatko RB, Peters RJ. Insights into diterpene cyclization from structure of bifunctional abietadiene synthase from Abies grandis. J Biol Chem 2012;287:6840-50. [PMID: 22219188 DOI: 10.1074/jbc.m111.337592] [Citation(s) in RCA: 77] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
41
Ueberbacher BT, Hall M, Faber K. Electrophilic and nucleophilic enzymatic cascade reactions in biosynthesis. Nat Prod Rep 2012;29:337-50. [DOI: 10.1039/c2np00078d] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
42
Faraldos JA, Antonczak AK, González V, Fullerton R, Tippmann EM, Allemann RK. Probing eudesmane cation-π interactions in catalysis by aristolochene synthase with non-canonical amino acids. J Am Chem Soc 2011;133:13906-9. [PMID: 21815676 DOI: 10.1021/ja205927u] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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