Selective recognition of aluminum ions using an esculetin@Q[8] host–guest supramolecular fluorescent probe

Esculetin (ESC) and non-toxic Q[8] form a supramolecular compound combination, which can effectively monitor Al3+ in the water environment.

Assembly of Polyiodide Networks with Cu(II) Complexes of Pyridinol-Based Tetraaza Macrocycles

Polyiodide networks are currently of great practical interest for the preparation of new electronic materials. The participation of metals in the formation of these networks is believed to improve their mechanical performance and thermal stability. Here we report the results on the construction of polyiodide networks obtained using Cu(II) complexes of a series of pyridinol-based tetraazacyclophanes as countercations. The assembly of these crystalline polyiodides takes place from aqueous solutions on the basis of similar structural elements, the [CuL]²⁺ and [Cu(H_–1L)]⁺ (L = L2, L2-Me, L2-Me₃) complex cations, so that the peculiarities induced by the increase of N-methylation of ligands, the structural variable of ligands, can be highlighted. First, solution equilibria involving ligands and complexes were analyzed (potentiometry, NMR, UV–vis, ITC). Then, the appropriate conditions could be selected to prepare polyiodides based on the above complex cations. Single-crystal XRD analysis showed that the coordination of pyridinol units to two metal ions is a prime feature of these ligands, leading to polymeric coordination chains of general formula {[Cu(H_–1L)]}_nⁿ⁺ (L = L2-Me, L2-Me₃). In the presence of the I^–/I₂ couple, the polymerization tendency stops with the formation of [(CuL)(CuH_–1L)]³⁺ (L = L2-Me, L2-Me₃) dimers which are surrounded by polyiodide networks. Moreover, coordination of the pyridinol group to two metal ions transforms the surface charge of the ring from negative to markedly positive, generating a suitable environment for the assembly of polyiodide anions, while N-methylation shifts the directional control of the assembly from H-bonds to I···I interactions. In fact, an extended concatenation of iodine atoms occurs around the complex dimeric cations, the supramolecular I···I interactions become shorter and shorter, fading into stronger forces dominated by the orbital overlap, which is promising for effective electronic materials.

Polyiodides with high iodine density are generated by Cu(II) complexes of pyridinol-based tetraazacyclophanes. Direct coordination of iodine atoms to Cu(II), anion−π interactions with electron-poor aromatic surfaces, and shift of the directional control of assembly from H-bonds to I···I interactions, governed by N-methylation, are the main elements leading to enhanced iodine chaining and strengthening of I···I contacts.

Sensing ATP: Zeolitic Imidazolate Framework-67 Is Superior to Aptamers for Target Recognition

In a typical biosensor, a biomolecule such as an aptamer is used for target recognition, and a nanomaterial is used for signal generation. Herein, we communicate a reverse system using a nanomaterial for target recognition and a DNA for signaling. We discovered that a classic metal-organic framework material, zeolitic imidazolate framework (ZIF)-67, has ultrahigh selectivity for recognizing adenosine triphosphate (ATP), allowing a fluorescently labeled DNA oligonucleotide to be used for signal generation. This sensor showed up to a 24-fold increase in fluorescence upon adding 1 mM ATP, while the fluorescence increase after adding adenosine or guanosine triphosphate was less than twofold. Its selectivity is much better than that of the ATP aptamer, which binds adenosine even better. Using isothermal titration calorimetry, the selective binding of ATP was independently verified. This sensor has a detection limit of 29 nM ATP and it can even detect ATP in serum. By replacing Co²⁺ with Zn²⁺ to form ZIF-8 or by using CoO, the selectivity for ATP was lost. Therefore, by sophisticated material design, ultrahigh selectivity for molecular recognition can be achieved.

The fluorescence of a mercury probe based on osthol

The ability of osthol (OST) to recognize mercury ions in aqueous solution was studied using fluorescence, UV–vis spectrophotometry, mass spectrometry, and ¹H NMR spectroscopy, and the recognition mechanism is discussed. The results showed that OST and Hg²⁺ can form a complex with a stoichiometric ratio of 1:1. The binding constant was 1.552 × 10⁵ L∙mol⁻¹, having a highly efficient and specific selectivity for Hg²⁺. The fluorescence intensity of OST showed a good linear correlation with the Hg²⁺ concentration (6.0 × 10⁻⁵ to 24.0 × 10⁻⁵ mol∙L⁻¹, R² = 0.9954), and the detection limit of the probe was 5.04 × 10⁻⁸ mol∙L⁻¹, which can be used for the determination of Hg²⁺ traces.

Monitoring inorganic pyrophosphatase activity with the fluorescent dizinc(ii) complex of a macrocycle bearing one dansylamidoethyl antenna

The dizinc(ii) complexes of L were used for the recognition of anions by fluorescence spectroscopy (L is a heteroditopic hexaazamacrocycle with two diethylenetriamine coordination heads with 2-methylpyridyl and dansylamido ethyl arms, and m-xylyl spacers). The protonation of L and stability constants of its zinc(ii) complexes were determined in aqueous solution, at 298.2 ± 0.1 K and I = 0.10 ± 0.01 M in KNO₃. At a 2 : 1 Zn²⁺/L ratio, the dinuclear complexes clearly dominate. The ligand alone does not display fluorescence changes upon increasing the pH value, but in the presence of Zn²⁺ the emission reaches a maximum at pH ≅ 7.5, at which 95% of the ligand is in the dinuclear complex form. The emission appears concomitantly with the [Zn₂H_-1L]³⁺ species formation, which supports that the latter complex corresponds to the metal-promoted deprotonation of dansylamide NH. The [Zn₂H_-1L]³⁺ complexes were used for the recognition of phosphate and polyphosphate anions in aqueous solution buffered at pH 7.5 with 2 mM PIPPS, at 298.2 K. The binding of anions causes a decrease of the emission. The association constant determination revealed that HPPi^3- is the strongest bound anion (log K_app = 5.57), followed by HATP^3- (two times weaker), and the remaining anions show lower binding constants, with HPO₄^2- having the weakest uptake by the receptor. The observed selectivity of the [Zn₂H_-1L]³⁺ receptor for PPi in relation to HPO₄^2-, and the fact that the formation of the [Zn₂H_-1L]³⁺ complex is not disturbed by the presence of Mg²⁺, allowed monitoring of the PPi hydrolysis by using inorganic pyrophosphatase in real-time.

Stabilisation of Exotic Tribromide (Br3-) Anions via Supramolecular Interaction with A Tosylated Macrocyclic Pyridinophane. A Serendipitous Case

Tetraaza-macrocyclic pyridinophane L-Ts, decorated with a p-toluenesulfonyl (tosyl; Ts) group, appear to be a useful tool to provide evidence on how the interplay of various supramolecular forces can help stabilise exotic anionic species such as tribromide (Br₃⁻) anions. Indeed, crystals of (H₂L-Ts)(Br₃)_1.5(NO₃)_0.5 unexpectedly grew from an acidic (HNO₃) aqueous solution of L-Ts in the presence of Br⁻ anions. The crystal structure of this compound was determined by single crystal XRD analysis. Hydrogen bonds, salt-bridges, anion-π, π-π stacking, and van der Waals interactions contribute to stabilising the crystal lattice. The observation of two independent Br₃⁻ anions stuck over the π-electron densities of pyridine and tosyl ligand groups, one of them being sandwiched between two pyridine rings, corroborates the significance of anion-π interactions for N-containing heterocycles. We show herein the possibility of detecting anion-π contacts from fingerprint plots generated by Hirshfeld surface analysis, demonstrating the effective usage of this structural investigation technique to further dissect individual contributions of stabilising supramolecular forces.

Aromatic and heteroaromatic azacrown compounds: advantages and disadvantages of rigid macrocyclic ligands

Current approaches to the synthesis of aromatic and heteroaromatic azamacrocycles and their derivatives are summarized and systematized. The relationship between the structure of azacrown compounds and their complexation behaviour towards metal cations is analyzed. The diversity of practical applications of azamacrocyclic derivatives in medicine, biology and analytical and organic chemistry, as well as for the design of molecular devices is demonstrated.

The bibliography includes 307 references.

A novel bimacrocyclic polyamine-based fluorescent probe for sensitive detection of Hg2+ and glutathione in human serum

Detection of glutathione in human serum is of great importance for clinical diagnosis of various diseases, such as AIDS, diabetes mellitus, Alzheimer disease and cancer. In this work, a new water-soluble bismacrocyclic polyamine-derived compound, namely L, which contains two molecules of 4-nitro-1,2,3-benzoxa-diazole as the fluorophores, was designed and prepared. The experiments of selectivity of L toward metal ions showed it could rapidly and sensitively detect Hg²⁺ with a detection limit of 27 nM. Furthermore, the cell imaging and co-staining experiments in HeLa cells demonstrated that the L-Hg²⁺ probe had selectivity for the Golgi apparatus to a certain degree. Moreover, it had excellent selectivity for biothiols, especially for glutathione. Finally, the probe was successfully applied to sensitively detect glutathione (GSH) in human serum and fetal bovine serum.

Structure-activity relationship study of ProxyPhos chemosensors for the detection of proximal phosphorylation and other phosphate species

Chemosensors for the detection of phosphate-containing biological species are in high need. Detection of proximally phosphorylated sites of PP_i and those found in peptides and proteins has been demonstrated using chemosensors containing pyrene, as a fluorescent reporter, and a Zn²⁺-chelate, as a phosphate-binding group. Using these sensors, detection of proximal phosphate groups is afforded by binding of at least two of the sensor molecules to the adjacent phosphates, via the Zn²⁺ centres, leading to excimer formation between the pyrene groups and the corresponding shift in emission from 376 to 476 nm. Although several reports of this chemosensor class have been made, no detailed studies of selectivity of these sensors among major phosphate targets have been reported. In this study, a library of this class of chemosensors, termed ProxyPhos, which contained various linkers and Zn²⁺-chelating groups (i.e. DPA, cyclen and cyclam), was prepared and the effects of structural variation on the sensing efficiency and selectivity were evaluated among proximally phosphorylated peptides, proteins, nucleotides, P_i and PP_i. As a result of this study, we have identified ProxyPhos library members that are most suitable for the detection of proximally phosphorylated peptides, PP_i, UTP, and a DpYD peptide motif, and have generally provided a foundation for the selection of ProxyPhos chemosensors for further development of specific biologically relevant assays. The broad utility of ProxyPhos is further supported by the demonstrated lack of these sensors' cytotoxicity, ability to rapidly permeate into live and fixed cells and compatibility with gel staining methods.

Pyrophosphate-Induced Intramolecular Excimer Formation in Dinuclear Zinc(II) Complexes with Tetrakisquinoline Ligands

Dinuclear Zn²⁺ complexes with HTQHPN ( N,N,N' ,N'-tetrakis(2-quinolylmethyl)-2-hydroxy-1,3-propanediamine) derivatives have been prepared, and their pyrophosphate (PPi, P₂O₇^4-) sensing properties were examined. The ligand library includes six HTQHPN derivatives with electron-donating/withdrawing substituents, an extended aromatic ring, and six-membered chelates upon zinc binding. Complexation of ligand with 2 equiv of Zn²⁺ promotes small to moderate fluorescence enhancement around 380 nm, but in the cases of HTQHPN, HT(6-FQ)HPN ( N,N,N' ,N'-tetrakis(6-fluoro-2-quinolylmethyl)-2-hydroxy-1,3-propanediamine), and HT(8Q)HPN ( N,N,N' ,N'-tetrakis(8-quinolylmethyl)-2-hydroxy-1,3-propanediamine), subsequent addition of PPi induced a significant fluorescence increase around 450 nm. This fluorescence enhancement in the long-wavelength region is attributed to the conformational change of the bis-(quinolylmethyl)amine moiety which promotes intramolecular excimer formation between adjacent quinolines upon binding with PPi. The structures of PPi- and phosphate-bound dizinc complexes were revealed by X-ray crystallography utilizing phenyl-substituted analogues. The zinc complex with HT(8Q)HPN exhibits the highest signal enhancement ( I_PPi/ I₀ = 12.5) and selectivity toward PPi sensing ( I_ATP/ I_PPi = 20% and I_ADP/ I_PPi = 25%). The fluorescence enhancement turned to decrease gradually after the addition of more than 1 equiv of PPi due to the removal of zinc ion from the ligand-zinc-PPi ternary complex, allowing the accurate determination of PPi concentrations at the fluorescence maximum composition. The practical application of the present method was demonstrated monitoring the enzymatic activity of pyrophosphatase.

A novel glucosamine-linked fluorescent chemosensor for the detection of pyrophosphate in an aqueous medium and live cells

A glucosamine-linked Cu²⁺ ensemble has been successfully developed for detection of pyrophosphate (PPi) in aqueous medium and in live MD-AMB-231 cells.

A Schiff base platform: structures, sensing of Zn(ii) and PPi in aqueous medium and anticancer activity

A Schiff base platform was explored to present structural aspects of its Zn(ii) and Cd(ii) coordination compounds, sensing behavior towards Zn(ii) and PPi in aqueous medium and anticancer activity.

Recent progress in the design and applications of fluorescence probes containing crown ethers

Crown ethers, discovered by the winner of the Nobel Prize Charles Pedersen, are cyclic chemical compounds that consist of a ring or multiple rings containing several ether groups that are capable of binding various ions.

Di- and Triphosphate Recognition and Sensing with Mono- and Dinuclear Fluorescent Zinc(II) Complexes: Clues for the Design of Selective Chemosensors for Anions in Aqueous Media

The synthesis of a new ligand (L1) containing two 1,4,7-triazacyclononane ([9]aneN₃ ) moieties linked by a 4,5-dimethylenacridine unit is reported. The binding and fluorescence sensing properties toward Cu²⁺ , Zn²⁺ , Cd²⁺ , and Pb²⁺ of L1 and receptor L2, composed of two [9]aneN₃ macrocycles bridged by a 6,6''-dimethylen-2,2':6',2''-terpyridine unit, have been studied by coupling potentiometric, UV/Vis absorption, and emission measurements in aqueous media. Both receptors can selectively detect Zn²⁺ thanks to fluorescence emission enhancement upon metal binding. The analysis of the binding and sensing properties of the Zn²⁺ complexes toward inorganic anions revealed that the dinuclear Zn²⁺ complex of L1 selectively binds and senses the triphosphate anion (TP), whereas the mononuclear Zn²⁺ complex of L2 displays selective recognition of diphosphate (DP). Binding of TP or DP induces emission quenching of the Zn²⁺ complexes with L1 and L2, respectively. These results are exploited to discuss the role played by pH, number of coordinated metal cations, and binding ability of the bridging units in metal and/or anion coordination and sensing.

Cd(II)-terpyridine-based complex as a ratiometric fluorescent probe for pyrophosphate detection in solution and as an imaging agent in living cells

The terpyridine anthracene ligand was synthesized and characterized. is a ratiometric fluorescent probe for Cd(2+) with a recognition mechanism based on intramolecular charge transfer (ICT). An complex was isolated, and its structure was established using single-crystal XRD. The complex was able to serve as a novel reversible chemosensing ensemble to allow ratiometric response to pyrophosphate (PPi) in aqueous media. Moreover, the fluorescence imaging in living cells from these two emission channels suggested that was a ratiometric probe for Cd(2+), and the in situ generated complex was also a ratiometric ensemble for PPi detection in living cells.

A highly selective fluorescent sensor for Al3+ and the use of the resulting complex as a secondary sensor for PPi in aqueous media: its applicability in live cell imaging

An “off–on–off” reversible fluorescent sensor has been developed for sequential detection of Al³⁺ and PPi in aqueous media, and has further been applied to live cell imaging.

Making pyrophosphate visible: the first precipitable and real-time fluorescent sensor for pyrophosphate in aqueous solution

An in situ generated Zn²⁺ complex of di-2-(picoly) amine BINOL–DPA was presented as a precipitable and real-time fluorescent sensor for PPi with a detection limit of 95 nm, and it could be successfully applied in imaging PPi in living cells.

Highly sensitive and selective detection of the pyrophosphate anion biomarker under physiological conditions

Self-assembled monolayers on gold of a multidentate adsorbate bearing a bis(carbazolyl)urea unit are prepared and used as a surface resonance plasmon sensor for the detection of hydrogen pyrophosphate anions under physiological conditions.

Novel reversible Zn2+-assisted biological phosphate "turn-on" probing through stable aryl-hydrazone salicylaldimine conjugation that attenuates ligand hydrolysis

A novel reversible zinc(II) chemosensing ensemble (2·Zn(2+)) allows for selective "turn-on" fluorescence sensing of ATP and PPi in aqueous media (detection limits: 2.4 and 1.0 μM, respectively) giving selective binding patterns: ATP ∼ PPi > ADP ≫ AMP > monophosphates ≈ remaining ions tested. The conjugated hydrazone [C═N-NH-R] resists hydrolysis considerably, compared to the imine [C═N-CH2-R, pyridin-2-ylmethanamine] functionality, and generalizes to other chemosensing efforts. Prerequisite Zn(2+)·[O(phenol)N(imine)N(pyr)] binding is selective, as determined by UV-vis and NMR spectroscopy; ATP or PPi extracts Zn(2+) to regenerate the ligand-fluorophore conjugate (PPi: turn-on, 512 nm; detection limit, 1.0 μM). Crystallography, 2-D NMR spectroscopy, and DFT determinations (B3LYP/631g*) support the nature of compound 2. 2-Hydrazinyl-pyridine-salicylaldehyde conjugation is unknown, as such; a paucity of chemosensing-Zn(2+) binding reports underscores the novelty of this modifiable dual cation/anion detection platform. A combined theoretical and experimental approach reported here allows us to determine both the potential uniqueness as well as drawbacks of this novel conjugation.

Chromogenic and fluorogenic chemosensors and reagents for anions. A comprehensive review of the years 2010-2011

This review focuses on examples reported in the years 2010-2011 dealing with the design of chromogenic and fluorogenic chemosensors or reagents for anions.

Pyrophosphate selective fluorescent probe and molecular flip-flop

Highly selective detection of pyrophosphate in the presence of inorganic phosphates, halides, acetate, ATP, other nucleotides in neutral aqueous solutions is achieved by a fluorescent Zn-ensemble based system. The implementation of the first molecule based JK-latch sequential logic function is also described.

Metal coordination in photoluminescent sensing

Coordination chemistry plays an essential role in the design of photoluminescent probes for metal ions. Metal coordination to organic dyes induces distinct optical responses which signal the presence of metal species of interest. Luminescent lanthanide (Ln(3+)) and transition metal complexes of d(6), d(8) and d(10) configurations often exhibit unique luminescence properties different from organic dyes, such as high quantum yield, large Stokes shift, long emission wavelength and emission lifetimes, low sensitivity to microenvironments, and can be explored as lumophores to construct probes for metal ions, anions and neutral species. In this review, the design principles and coordination chemistry of metal probes based on mechanisms of PeT, PCT, ESIPT, FRET, and excimer formation will be discussed in detail. Particular attention will be given to rationales for the design of turn-on and ratiometric probes. Moreover, phosphorescent probe design based on Ln(3+) and d(6), d(8) and d(10)-metal complexes are also presented via discussing certain factors affecting the phosphorescence of these metal complexes. A survey of the latest progress in photoluminescent probes for identification of essential metal cations in the human body or toxic metal cations in the environment will be presented focusing on their design rationales and sensing behaviors. Metal complex-based photoluminescent probes for biorelated anions such as PPi, and neutral biomolecules ATP, NO, and H(2)S will be discussed also in the context of their metal coordination-related sensing behaviors and design approaches.

Highly selective visual distinction of pyrophosphate from other phosphate anions with 4-[(5-chloro-2-pyridyl)azo]-1,3-diaminobenzene in the presence of copper(II) ions

Pyrophosphate (PPi), as a biologically related phosphate anion, plays very important roles in organisms. Here, a highly selective visual method for distinction of PPi was made with commercial available 4-[(5-chloro-2-pyridyl)azo]-1,3-diaminobenzene (5-Cl-PADAB) in the presence of copper(II). The yellow solution of 5-Cl-PADAB exhibits strong absorption at 450.5 nm, and addition of Cu(II) results in a red solution with a new absorption band at 506.0 nm. Upon titration with PPi, the absorption band at 506.0 nm decreases with blueshift, while another new absorption band in the region from 562.0 nm to 750.0 nm appears which gradually splits into two peaks, and the color accordingly changes from red to cyan. Further addition of PPi, the new absorption peaks gradually disappear, and the mixture shows the absorption of 5-Cl-PADAB and recovers to yellow from cyan. This process is highly selective for PPi since other phosphate anions such as nucleotides cannot induce such spectral and color changes. With this method, the detection of PPi concentration in human urine was made with satisfactory results.

Highly selective colorimetric sensing pyrophosphate in water by a NBD-phenoxo-bridged dinuclear Zn(II) complex

A novel NBD-phenoxo-bridged dinuclear Zn(II) complex is found to be an effective colorimetric sensor for pyrophosphate (PPi) in pure aqueous solution over a wide pH range. This sensor shows high binding affinity (K(a)≈ 3 × 10(8) M(-1)) and high selectivity for PPi, and can be also used to assay the activity of pyrophosphatase in real time.

A novel NIR fluorescent turn-on sensor for the detection of pyrophosphate anion in complete water system

A novel fluorescent sensor DCAA-Cu(2+) was developed, showing turn-on fluorescence in NIR region with high selectivity to pyrophosphate anion in 100% aqueous solution.