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Silly F. Elucidating the intramolecular contrast in the STM images of 2,4,6-tris(4',4'',4'''-trimethylphenyl)-1,3,5-triazine molecules recorded at room-temperature and at the liquid-solid interface. RSC Adv 2020; 10:5742-5746. [PMID: 35497445 PMCID: PMC9049222 DOI: 10.1039/c9ra09681g] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2019] [Accepted: 01/23/2020] [Indexed: 11/21/2022] Open
Abstract
Star-shaped 2,4,6-tris(4',4'',4'''-trimethylphenyl)-1,3,5-triazine molecules self-assemble at the solid-liquid interface into a compact hexagonal nanoarchitecture on graphite. High resolution scanning tunneling microscopy (STM) images of the molecules reveal intramolecular features. Comparison of the experimental data with calculated molecular charge density contours shows that the molecular features in the STM images correspond to molecular LUMO+2.
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Affiliation(s)
- Fabien Silly
- TITANS, SPEC, CEA, CNRS, Université Paris-Saclay CEA Saclay F-91191 Gif sur Yvette France +33169088446 +33169088019
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2
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Dutta S, Gellman AJ. Enantiomer surface chemistry: conglomerate versus racemate formation on surfaces. Chem Soc Rev 2018; 46:7787-7839. [PMID: 29165467 DOI: 10.1039/c7cs00555e] [Citation(s) in RCA: 72] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Research on surface chirality is motivated by the need to develop functional chiral surfaces for enantiospecific applications. While molecular chirality in 3D has been the subject of study for almost two centuries, many aspects of 2D chiral surface chemistry have yet to be addressed. In 3D, racemic mixtures of chiral molecules tend to aggregate into racemate (molecularly heterochiral) crystals much more frequently than conglomerate (molecularly homochiral) crystals. Whether chiral adsorbates on surfaces preferentially aggregate into heterochiral rather than homochiral domains (2D crystals or clusters) is not known. In this review, we have made the first attempt to answer the following question based on available data: in 2D racemic mixtures adsorbed on surfaces, is there a clear preference for homochiral or heterochiral aggregation? The current hypothesis is that homochiral packing is preferred on surfaces; in contrast to 3D where heterochiral packing is more common. In this review, we present a simple hierarchical scheme to categorize the chirality of adsorbate-surface systems. We then review the body of work using scanning tunneling microscopy predominantly to study aggregation of racemic adsorbates. Our analysis of the existing literature suggests that there is no clear evidence of any preference for either homochiral or heterochiral aggregation at the molecular level by chiral and prochiral adsorbates on surfaces.
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Affiliation(s)
- Soham Dutta
- Department of Chemical Engineering, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
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3
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El Garah M, Dianat A, Cadeddu A, Gutierrez R, Cecchini M, Cook TR, Ciesielski A, Stang PJ, Cuniberti G, Samorì P. Atomically Precise Prediction of 2D Self-Assembly of Weakly Bonded Nanostructures: STM Insight into Concentration-Dependent Architectures. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2016; 12:343-350. [PMID: 26596683 DOI: 10.1002/smll.201502957] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2015] [Indexed: 06/05/2023]
Abstract
A joint experimental and computational study is reported on the concentration-dependant self-assembly of a flat C3 -symmetric molecule on a graphite surface. As a model system a tripodal molecule, 1,3,5-tris(pyridin-3-ylethynyl)benzene, has been chosen, which can adopt either C3h or Cs symmetry when planar, as a result of pyridyl rotation along the alkynyl spacers. Density functional theory (DFT) simulations of 2D nanopatterns with different surface coverage reveal that the molecule can generate different types of self-assembled motifs. The stability of fourteen 2D patterns and the influence of concentration are analyzed. It is found that ordered, densely packed monolayers and 2D porous networks are obtained at high and low concentrations, respectively. A concentration-dependent scanning tunneling microscopy (STM) investigation of this molecular self-assembly system at a solution/graphite interface reveals four supramolecular motifs, which are in perfect agreement with those predicted by simulations. Therefore, this DFT method represents a key step forward toward the atomically precise prediction of molecular self-assembly on surfaces and at interfaces.
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Affiliation(s)
- Mohamed El Garah
- ISIS & icFRC, Université de Strasbourg & CNRS, 8 allée Gaspard Monge, 67000, Strasbourg, France
| | - Arezoo Dianat
- Faculty of Mechanical Science and Engineering, Institute for Materials Sciences and Max Bergmann Center of Biomaterials, 01062, Dresden, Germany
- Institute for Materials Science, Dresden Center for Computational Materials Science (DCCMS) and Max Bergmann Center of Biomaterials, Dresden University of Technology, 01062, Dresden, Germany
| | - Andrea Cadeddu
- ISIS & icFRC, Université de Strasbourg & CNRS, 8 allée Gaspard Monge, 67000, Strasbourg, France
| | - Rafael Gutierrez
- Faculty of Mechanical Science and Engineering, Institute for Materials Sciences and Max Bergmann Center of Biomaterials, 01062, Dresden, Germany
- Institute for Materials Science, Dresden Center for Computational Materials Science (DCCMS) and Max Bergmann Center of Biomaterials, Dresden University of Technology, 01062, Dresden, Germany
| | - Marco Cecchini
- ISIS & icFRC, Université de Strasbourg & CNRS, 8 allée Gaspard Monge, 67000, Strasbourg, France
| | - Timothy R Cook
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT, 84112, USA
| | - Artur Ciesielski
- ISIS & icFRC, Université de Strasbourg & CNRS, 8 allée Gaspard Monge, 67000, Strasbourg, France
| | - Peter J Stang
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT, 84112, USA
| | - Gianaurelio Cuniberti
- Faculty of Mechanical Science and Engineering, Institute for Materials Sciences and Max Bergmann Center of Biomaterials, 01062, Dresden, Germany
- Institute for Materials Science, Dresden Center for Computational Materials Science (DCCMS) and Max Bergmann Center of Biomaterials, Dresden University of Technology, 01062, Dresden, Germany
| | - Paolo Samorì
- ISIS & icFRC, Université de Strasbourg & CNRS, 8 allée Gaspard Monge, 67000, Strasbourg, France
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4
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Lin T, Wu Q, Liu J, Shi Z, Liu PN, Lin N. Thermodynamic versus kinetic control in self-assembly of zero-, one-, quasi-two-, and two-dimensional metal-organic coordination structures. J Chem Phys 2015; 142:101909. [DOI: 10.1063/1.4906174] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Tao Lin
- Department of Physics, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, China
| | - Qi Wu
- Department of Physics, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, China
| | - Jun Liu
- Shanghai Key Laboratory of Functional Materials Chemistry and Institute of Fine Chemicals, East China University of Science and Technology, Meilong Road 130, Shanghai, China
| | - Ziliang Shi
- Department of Physics, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, China
| | - Pei Nian Liu
- Shanghai Key Laboratory of Functional Materials Chemistry and Institute of Fine Chemicals, East China University of Science and Technology, Meilong Road 130, Shanghai, China
| | - Nian Lin
- Department of Physics, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong, China
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Vijayaraghavan S, Ecija D, Auwärter W, Joshi S, Seufert K, Drach M, Nieckarz D, Szabelski P, Aurisicchio C, Bonifazi D, Barth JV. Supramolecular Assembly of Interfacial Nanoporous Networks with Simultaneous Expression of Metal-Organic and Organic-Bonding Motifs. Chemistry 2013; 19:14143-50. [DOI: 10.1002/chem.201301852] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Revised: 06/19/2013] [Indexed: 11/07/2022]
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Ciesielski A, Szabelski PJ, Rżysko W, Cadeddu A, Cook TR, Stang PJ, Samorì P. Concentration-Dependent Supramolecular Engineering of Hydrogen-Bonded Nanostructures at Surfaces: Predicting Self-Assembly in 2D. J Am Chem Soc 2013; 135:6942-50. [DOI: 10.1021/ja4002025] [Citation(s) in RCA: 131] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Artur Ciesielski
- Nanochemistry Laboratory, ISIS & icFRC, Université de Strasbourg & CNRS, 8 allée Gaspard Monge, 67000 Strasbourg, France
| | | | | | - Andrea Cadeddu
- Nanochemistry Laboratory, ISIS & icFRC, Université de Strasbourg & CNRS, 8 allée Gaspard Monge, 67000 Strasbourg, France
| | - Timothy R. Cook
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake
City, Utah 84112, United States
| | - Peter J. Stang
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake
City, Utah 84112, United States
| | - Paolo Samorì
- Nanochemistry Laboratory, ISIS & icFRC, Université de Strasbourg & CNRS, 8 allée Gaspard Monge, 67000 Strasbourg, France
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Szabelski P, Rżysko W, Pańczyk T, Ghijsens E, Tahara K, Tobe Y, De Feyter S. Self-assembly of molecular tripods in two dimensions: structure and thermodynamics from computer simulations. RSC Adv 2013. [DOI: 10.1039/c3ra45342a] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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8
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Rajwar D, Sun X, Cho SJ, Grimsdale AC, Fichou D. Synthesis and 2D self-assembly at the liquid-solid interface of end-substituted star-shaped oligophenylenes. CrystEngComm 2012. [DOI: 10.1039/c2ce25530h] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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