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Colorimetric detection of acid-base in organic solvents, water, and food products using polydiacetylene/Zn2+/ZnO nanocomposites with tunable sensitivity. Colloids Surf A Physicochem Eng Asp 2022. [DOI: 10.1016/j.colsurfa.2022.129856] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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Novel aminocalixarene-modified polydiacetylene vesicles: Synthesis and naked-eye detection of ATP. Colloids Surf A Physicochem Eng Asp 2021. [DOI: 10.1016/j.colsurfa.2021.127642] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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Polydiacetylene vesicles acting as colorimetric sensor for the detection of plantaricin LD1. Anal Biochem 2021; 631:114368. [PMID: 34499898 DOI: 10.1016/j.ab.2021.114368] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Revised: 09/03/2021] [Accepted: 09/05/2021] [Indexed: 01/14/2023]
Abstract
The interaction of antimicrobial peptides with membrane lipids plays a major role in numerous physiological processes. In this study, polydiacetylene (PDA) vesicles were synthesized using 10, 12-tricosadiynoic acid (TRCDA) and 1, 2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC). These vesicles were applied as artificial membrane biosensor for the detection of plantaricin LD1 purified from Lactobacillus plantarum LD1. Plantaricin LD1 (200 μg/mL) was able to interact with PDA vesicles by changing the color from blue to red with colorimetric response 30.26 ± 0.59. Nisin (200 μg/mL), used as control, also changed the color of the vesicles with CR% 50.56 ± 0.98 validating the assay. The vesicles treated with nisin and plantaricin LD1 showed increased infrared absorbance at 1411.46 and 1000-1150 cm-1 indicated the interaction of bacteriocins with phospholipids and fatty acids, respectively suggesting membrane-acting nature of these bacteriocins. Further, microscopic observation of bacteriocin-treated vesicles showed several damages indicating the interaction of bacteriocins. These findings suggest that the PDA vesicles may be used as bio-mimetic sensor for the detection of bacteriocins produced by several probiotics in food and therapeutic applications.
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Abstract
The pervasive spread of infectious diseases and pandemics, such as the 2019 coronavirus disease (COVID-19), are becoming increasingly serious and urgent threats to human health. Preventing the spread of such diseases prioritizes the development of sensing devices that can rapidly, selectively, and reliably detect pathogens at minimal cost. Paper-based analytical devices (PADs) are promising tools that satisfy those criteria. Numerous paper-based biosensors have been established that rival conventional pathogen detection methods. Among them, colorimetric strategies are promising since results can be interpreted by eye, and are simple to operate, which is advantageous for point-of-care testing (POCT). Particularly, the application of nanomaterials on paper-based biosensors has become important as these materials are capable of converting signals from pathogens through unique mechanisms to yield an amplified colorimetric readout. To highlight the research progress on using nanomaterials in colorimetric paper-based biosensor for pathogen detection, we discuss the sensing mechanisms of how they work, structural and analytical characteristics of the devices, and representative recent applications. Current challenges and future directions of using PADs and nanomaterial-mediated strategies are also discussed.
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Affiliation(s)
- Quynh Huong Nguyen
- Department of BioNano Technology, Gachon University, 1342 Seongnamdae-ro, Sujeong-gu, Seongnam, Gyeonggi 13120, Republic of Korea
| | - Moon Il Kim
- Department of BioNano Technology, Gachon University, 1342 Seongnamdae-ro, Sujeong-gu, Seongnam, Gyeonggi 13120, Republic of Korea
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Valiyakhmetova AM, Sultanova ED, Burilov VA, Solovieva SE, Antipin IS. New DNA-sensor based on thiacalix[4]arene-modified polydiacetylene particles. Russ Chem Bull 2019. [DOI: 10.1007/s11172-019-2521-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Burilov VA, Fatikhova GA, Dokuchaeva MN, Nugmanov RI, Mironova DA, Dorovatovskii PV, Khrustalev VN, Solovieva SE, Antipin IS. Synthesis of new p-tert-butylcalix[4]arene-based polyammonium triazolyl amphiphiles and their binding with nucleoside phosphates. Beilstein J Org Chem 2018; 14:1980-1993. [PMID: 30202452 PMCID: PMC6122204 DOI: 10.3762/bjoc.14.173] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2018] [Accepted: 07/13/2018] [Indexed: 01/10/2023] Open
Abstract
The synthesis of new calix[4]arenes adopting a cone stereoisomeric form bearing two or four azide fragments on the upper rim and water-soluble triazolyl amphiphilic receptors with two or four polyammonium headgroups via copper-catalyzed azide–alkyne cycloaddition reaction has been performed for the first time. It was found that the synthesized macrocycles form stable aggregates with hydrodynamic diameters between 150–200 nm and electrokinetic potentials about +40 to +60 mV in water solutions. Critical aggregation concentration (CAC) values were measured using a micelle method with pyrene and eosin Y as dye probes. The CAC values of tetraalkyl-substituted macrocycles 12a,b (5 µM for both) are significantly lower than those for dialkyl-substituted macrocycles 10a,b (790 and 160 µM, respectively). Premicellar aggregates of macrocycles 10a,b and 12a,b with the dye eosin Y were used for nucleotides sensing through a dye replacement procedure. It is unusual that disubstituted macrocycles 10a,b bind more effectively a less charged adenosine 5'-diphosphate (ADP) than adenosine 5'-triphosphate (ATP). A simple colorimetric method based on polydiacetylene vesicles decorated with 10b was elaborated for the naked-eye detection of ADP with a detection limit of 0.5 mM.
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Affiliation(s)
- Vladimir A Burilov
- Kazan Federal University, 18 Kremlevskaya st., Kazan 420008, Russian Federation
| | | | - Mariya N Dokuchaeva
- Kazan Federal University, 18 Kremlevskaya st., Kazan 420008, Russian Federation
| | - Ramil I Nugmanov
- Kazan Federal University, 18 Kremlevskaya st., Kazan 420008, Russian Federation
| | - Diana A Mironova
- Kazan Federal University, 18 Kremlevskaya st., Kazan 420008, Russian Federation
| | - Pavel V Dorovatovskii
- National Research Center "Kurchatov Institute", 1 Ak. Kurchatov Square, Moscow 123182, Russian Federation
| | - Victor N Khrustalev
- National Research Center "Kurchatov Institute", 1 Ak. Kurchatov Square, Moscow 123182, Russian Federation.,Peoples' Friendship University of Russia (RUDN University), 6 Miklukho-Maklay Street, Moscow 117198, Russin Federation
| | - Svetlana E Solovieva
- Kazan Federal University, 18 Kremlevskaya st., Kazan 420008, Russian Federation.,A. E. Arzubov Institute of Organic & Physical Chemistry, 8 Arzubov Street, Kazan 420088, Russian Federation
| | - Igor S Antipin
- Kazan Federal University, 18 Kremlevskaya st., Kazan 420008, Russian Federation.,A. E. Arzubov Institute of Organic & Physical Chemistry, 8 Arzubov Street, Kazan 420088, Russian Federation
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Chanakul A, Traiphol R, Traiphol N. Utilization of polydiacetylene/zinc oxide nanocomposites to detect and differentiate organic bases in various media. J IND ENG CHEM 2017. [DOI: 10.1016/j.jiec.2016.09.025] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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Phospholipid/Polydiacetylene Vesicle-Based Colorimetric Assay for High-Throughput Screening of Bacteriocins and Halocins. Appl Biochem Biotechnol 2016; 182:142-154. [PMID: 27844338 DOI: 10.1007/s12010-016-2316-0] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2016] [Accepted: 10/30/2016] [Indexed: 12/20/2022]
Abstract
The colorimetric assay is phospholipid/polydiacetylene vesicle-based assay used for the detection of membrane-acting peptides. Bacteriocins and halocins are antimicrobial peptides known to kill target cells by membrane disruption. Therefore, the assay was applied for high-throughput (HTP) screening of bacteriocins and halocins produced by lactic acid bacteria and haloarchaea, respectively. The assay consisted of vesicles which were synthesized using four different phospholipids: dipalmitoylphosphatydilcholine (DPPC), dimyristoylphosphatidylcholine (DMPC), dimyristoylphosphoethanolamine (DMPE) and dimyristoylphosphatidylglycerol (DMPG) in combination with diacetylene monomer 10,12-tricosadiy noic acid (TRCDA). These vesicles demonstrated blue colour at 640 nm and turned pink/red after interaction with nisin. DMPE/TRCDA vesicles showed pink colour with the highest colorimetric response (CR %) after treatment with nisin and, therefore, selected for the screening of bacteriocins and halocins. The colour of the vesicles was changed within 5 min in the presence of 5 μM nisin suggesting the sensitivity of assay. The assay was applied on 54 strains of lactic acid bacteria (LAB) and 53 haloarchaea for screening of bacteriocins and halocins, respectively. Out of these strains, three strains of LAB and five strains of haloarchaea were found to be bacteriocin and halocin non-producer, respectively. The other strains demonstrated the presence of bacteriocins and halocins. The colorimetric assay was found to be rapid, specific and reliable for HTP screening of antimicrobial peptides such as bacteriocins and halocins from producer strains isolated from various natural resources.
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Yun D, Jeong D, Cho E, Jung S. Colorimetric Detection of Some Highly Hydrophobic Flavonoids Using Polydiacetylene Liposomes Containing Pentacosa-10,12-diynoyl Succinoglycan Monomers. PLoS One 2015; 10:e0143454. [PMID: 26600071 PMCID: PMC4658141 DOI: 10.1371/journal.pone.0143454] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2015] [Accepted: 11/04/2015] [Indexed: 12/04/2022] Open
Abstract
Flavonoids are a group of plant secondary metabolites including polyphenolic molecules, and they are well known for antioxidant, anti-allergic, anti-inflammatory and anti-viral propertied. In general, flavonoids are detected with various non-colorimetric detection methods such as column liquid chromatography, thin-layer chromatography, and electrochemical analysis. For the first time, we developed a straightforward colorimetric detection system allowing recognition of some highly hydrophobic flavonoids such as alpha-naphthoflavone and beta-naphthoflavone, visually using 10,12-pentacosadiynoic acid (PCDA) derivatized with succinoglycan monomers isolated from Sinorhizobium meliloti. Besides changes in visible spectrum, we also demonstrate fluorescence changes using our detection system in the presence of those flavonoids. The succinoglycan monomers attached to PCDA molecules may function as an unstructured molecular capturer for some highly hydrophobic flavonoids by hydrophobic interactions, and transmit their molecular interactions as a color change throughout the PCDA liposome.
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Affiliation(s)
- Deokgyu Yun
- Department of Bioscience and Biotechnology, Microbial Carbohydrate Resource Bank (MCRB) & Center for Biotechnology Research in UBITA (CBRU), Konkuk University, Seoul, South Korea
| | - Daham Jeong
- Department of Bioscience and Biotechnology, Microbial Carbohydrate Resource Bank (MCRB) & Center for Biotechnology Research in UBITA (CBRU), Konkuk University, Seoul, South Korea
| | - Eunae Cho
- Institute for Ubiquitous Information Technology and Applications (UBITA) & Center for Biotechnology Research in UBITA (CBRU), Konkuk University, Seoul, South Korea
| | - Seunho Jung
- Department of Bioscience and Biotechnology, Microbial Carbohydrate Resource Bank (MCRB) & Center for Biotechnology Research in UBITA (CBRU), Konkuk University, Seoul, South Korea
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Zhu L, Xu Q, Jiang L, Huang H, Li S. Polydiacetylene-based high-throughput screen for surfactin producing strains of Bacillus subtilis. PLoS One 2014; 9:e88207. [PMID: 24498439 PMCID: PMC3912180 DOI: 10.1371/journal.pone.0088207] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2013] [Accepted: 01/09/2014] [Indexed: 11/19/2022] Open
Abstract
Although traditional mutation is still an attractive approach for strain improvement, it is tedious, time-consuming, and inefficient to screen for surfactin producing strains. To overcome this, we developed a high-throughput screening method for surfactin producing mutants by applying polydiacetylene (PDA) vesicles as sensors with visible chromatic change from blue to red, detected as colorimetric response (CR%) signal, which can even semi-quantify the yields of surfactin. Bacillus subtilis 723 was used as parent strain and multiply mutated with atmospheric and room temperature plasma (ARTP). Mutants were cultured in MicroFlask by Duetz (24 square deepwell plates, Applikon Biotechnology) and surfactin titers were tested in 96-well plates with PDA vesicles. Mutants with surfactin titers above150 mg/L (CR% value above 26%) were selected as high-yield strains and further quantified by HPLC. By integrating MicroFlask cultivation and the PDA vesicles detection, we screened 27,000 mutants and found 37 high-yield strains. From these, one mutant produced 473.6 mg/L surfactin (including 353.1 mg/L C15 surfactin), which was 5.4-fold than that of the parent strain. This method is efficient, cost-effective and provides wider application in screening for various surfactants.
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Affiliation(s)
- Lingyan Zhu
- College of Biotechnology and Pharmaceutical Engineering, Nanjing University of Technology, Nanjing, People's Republic of China
| | - Qing Xu
- College of Biotechnology and Pharmaceutical Engineering, Nanjing University of Technology, Nanjing, People's Republic of China
| | - Ling Jiang
- College of Food Science and Light Industry, Nanjing University of Technology, Nanjing, People's Republic of China
| | - He Huang
- College of Biotechnology and Pharmaceutical Engineering, Nanjing University of Technology, Nanjing, People's Republic of China
- * E-mail: (HH); (SL)
| | - Shuang Li
- College of Biotechnology and Pharmaceutical Engineering, Nanjing University of Technology, Nanjing, People's Republic of China
- * E-mail: (HH); (SL)
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Colorimetric sensing properties of catechol-functional polymerized vesicles in aqueous solution and at solid surfaces. Colloids Surf A Physicochem Eng Asp 2014. [DOI: 10.1016/j.colsurfa.2013.09.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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12
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Development of a colorimetric, superparamagnetic biosensor for the capture and detection of biomolecules. Biosens Bioelectron 2013. [DOI: 10.1016/j.bios.2012.10.008] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Niamnont N, Kimpitak N, Tumcharern G, Rashatasakhon P, Sukwattanasinitt M. Highly sensitive salicylic fluorophore for visual detection of picomole amounts of Cu2+. RSC Adv 2013. [DOI: 10.1039/c3ra44239j] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
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Ampornpun S, Montha S, Tumcharern G, Vchirawongkwin V, Sukwattanasinitt M, Wacharasindhu S. Odd–Even and Hydrophobicity Effects of Diacetylene Alkyl Chains on Thermochromic Reversibility of Symmetrical and Unsymmetrical Diyndiamide Polydiacetylenes. Macromolecules 2012. [DOI: 10.1021/ma3019798] [Citation(s) in RCA: 69] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sasikarn Ampornpun
- Program of Petrochemistry and
Polymer Science, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Suriyakamon Montha
- National Metals and Materials
Technology Center, National Science and Technology Development Agency, Patumthanee 12120, Thailand
| | - Gamolwan Tumcharern
- Thailand National Nanotechnology
Center, National Science and Technology Development Agency, Patumthanee 12120, Thailand
| | - Viwat Vchirawongkwin
- Nanotec-CU Center of Excellence
on Food and Agriculture, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Mongkol Sukwattanasinitt
- Nanotec-CU Center of Excellence
on Food and Agriculture, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Sumrit Wacharasindhu
- Nanotec-CU Center of Excellence
on Food and Agriculture, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
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Pattanatornchai T, Charoenthai N, Wacharasindhu S, Sukwattanasinitt M, Traiphol R. Control over the color transition behavior of polydiacetylene vesicles using different alcohols. J Colloid Interface Sci 2012; 391:45-53. [PMID: 23123029 DOI: 10.1016/j.jcis.2012.10.004] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2012] [Revised: 10/02/2012] [Accepted: 10/03/2012] [Indexed: 10/27/2022]
Abstract
In this contribution, we investigate the color transition behavior of polydiacetylene (PDA) vesicles upon exposure to different chemical stimuli. A series of linear and branched alcohols are used as model additives, allowing systematic control of their molecular shape and polarity. The PDA vesicles are fabricated by using three monomers, 10,12-pentacosadiynoic acid (PCDA), 10,12-tricosadyinoic acid (TCDA), and N-(2-amino ethyl)pentacosa-10,12-dyinamide (AEPCDA). When a series of linear alcohols is used, the longer alcohol length causes color transition of all PDA vesicles. In this system, the penetration of linear alcohols into the inner layer of PDA vesicles is dictated by their polarity. The change of -OH position within the alcohol molecule also affects the degree of penetration. It requires a higher amount of the 2-propanol to induce color transitions of the PDAs compared to that of the 1-propanol. The addition of methyl branches into the hydrophobic tail of alcohols causes an increase in steric effect, which hinders the penetration as well. When the 2,2-dimethyl-1-propanol is used as a stimulus, the color transition of PDAs occurs at much higher alcohol concentration compared to 2-methyl-1-butanol, 3-methyl-1-butanol, and 1-pentanol. The variation of PDA structures also affects their ability to interact with the alcohols. The modified head group of poly(AEPCDA) promotes the ability to distinguish between 1-propanol and 2-propanol or 1-propanol and ethanol.
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Affiliation(s)
- Thanutpon Pattanatornchai
- Department of Chemistry and Center for Innovation in Chemistry, Faculty of Science, Naresuan University, Phitsanulok 65000, Thailand
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Eaidkong T, Mungkarndee R, Phollookin C, Tumcharern G, Sukwattanasinitt M, Wacharasindhu S. Polydiacetylene paper-based colorimetric sensor array for vapor phase detection and identification of volatile organic compounds. ACTA ACUST UNITED AC 2012. [DOI: 10.1039/c2jm16273c] [Citation(s) in RCA: 131] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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