1
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Nieto-Domínguez M, Fernández de Toro B, de Eugenio LI, Santana AG, Bejarano-Muñoz L, Armstrong Z, Méndez-Líter JA, Asensio JL, Prieto A, Withers SG, Cañada FJ, Martínez MJ. Thioglycoligase derived from fungal GH3 β-xylosidase is a multi-glycoligase with broad acceptor tolerance. Nat Commun 2020; 11:4864. [PMID: 32978392 PMCID: PMC7519651 DOI: 10.1038/s41467-020-18667-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Accepted: 09/02/2020] [Indexed: 11/09/2022] Open
Abstract
The synthesis of customized glycoconjugates constitutes a major goal for biocatalysis. To this end, engineered glycosidases have received great attention and, among them, thioglycoligases have proved useful to connect carbohydrates to non-sugar acceptors. However, hitherto the scope of these biocatalysts was considered limited to strong nucleophilic acceptors. Based on the particularities of the GH3 glycosidase family active site, we hypothesized that converting a suitable member into a thioglycoligase could boost the acceptor range. Herein we show the engineering of an acidophilic fungal β-xylosidase into a thioglycoligase with broad acceptor promiscuity. The mutant enzyme displays the ability to form O-, N-, S- and Se- glycosides together with sugar esters and phosphoesters with conversion yields from moderate to high. Analyses also indicate that the pKa of the target compound was the main factor to determine its suitability as glycosylation acceptor. These results expand on the glycoconjugate portfolio attainable through biocatalysis.
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Affiliation(s)
- Manuel Nieto-Domínguez
- Biotechnology for Lignocellulosic Biomass Group, Centro de Investigaciones Biológicas Margarita Salas (CSIC), C/Ramiro de Maeztu 9, 28040, Madrid, Spain.
| | - Beatriz Fernández de Toro
- NMR and Molecular Recognition Group, Centro de Investigaciones Biológicas Margarita Salas (CSIC), C/Ramiro de Maeztu 9, 28040, Madrid, Spain
| | - Laura I de Eugenio
- Biotechnology for Lignocellulosic Biomass Group, Centro de Investigaciones Biológicas Margarita Salas (CSIC), C/Ramiro de Maeztu 9, 28040, Madrid, Spain
| | - Andrés G Santana
- Glycochemistry and Molecular recognition group, Instituto de Química Orgánica General (CSIC), C/Juan de la Cierva, 3, 28006, Madrid, Spain
| | - Lara Bejarano-Muñoz
- Biotechnology for Lignocellulosic Biomass Group, Centro de Investigaciones Biológicas Margarita Salas (CSIC), C/Ramiro de Maeztu 9, 28040, Madrid, Spain
| | - Zach Armstrong
- Department of Chemistry, Centre for High-Throughput Biology, University of British Columbia, Vancouver, Canada
| | - Juan Antonio Méndez-Líter
- Biotechnology for Lignocellulosic Biomass Group, Centro de Investigaciones Biológicas Margarita Salas (CSIC), C/Ramiro de Maeztu 9, 28040, Madrid, Spain
| | - Juan Luis Asensio
- Glycochemistry and Molecular recognition group, Instituto de Química Orgánica General (CSIC), C/Juan de la Cierva, 3, 28006, Madrid, Spain
| | - Alicia Prieto
- Biotechnology for Lignocellulosic Biomass Group, Centro de Investigaciones Biológicas Margarita Salas (CSIC), C/Ramiro de Maeztu 9, 28040, Madrid, Spain
| | - Stephen G Withers
- Department of Chemistry, Centre for High-Throughput Biology, University of British Columbia, Vancouver, Canada
| | - Francisco Javier Cañada
- NMR and Molecular Recognition Group, Centro de Investigaciones Biológicas Margarita Salas (CSIC), C/Ramiro de Maeztu 9, 28040, Madrid, Spain
| | - María Jesús Martínez
- Biotechnology for Lignocellulosic Biomass Group, Centro de Investigaciones Biológicas Margarita Salas (CSIC), C/Ramiro de Maeztu 9, 28040, Madrid, Spain.
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2
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Kurdziel M, Kopeć M, Pâris A, Lewiński K, Lafite P, Daniellou R. Thioglycoligation of aromatic thiols using a natural glucuronide donor. Org Biomol Chem 2020; 18:5582-5585. [DOI: 10.1039/d0ob00226g] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This is the first example of a thioglycoligase that is able to catalyse the formation of S-glucuronides using aromatic thiols and a natural glucuronide donor.
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Affiliation(s)
- Martyna Kurdziel
- Institut de Chimie Organique et Analytique (ICOA)
- Université d'Orléans/CNRS
- UMR 7311
- Orléans Cedex 2
- France
| | - Magdalena Kopeć
- Institut de Chimie Organique et Analytique (ICOA)
- Université d'Orléans/CNRS
- UMR 7311
- Orléans Cedex 2
- France
| | - Arnaud Pâris
- Institut de Chimie Organique et Analytique (ICOA)
- Université d'Orléans/CNRS
- UMR 7311
- Orléans Cedex 2
- France
| | - Krzysztof Lewiński
- Jagiellonian University
- Faculty of Chemistry
- Department of Crystal Chemistry and Crystal Physics
- Gronostajowa 2
- Poland
| | - Pierre Lafite
- Institut de Chimie Organique et Analytique (ICOA)
- Université d'Orléans/CNRS
- UMR 7311
- Orléans Cedex 2
- France
| | - Richard Daniellou
- Institut de Chimie Organique et Analytique (ICOA)
- Université d'Orléans/CNRS
- UMR 7311
- Orléans Cedex 2
- France
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3
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Mestrom L, Przypis M, Kowalczykiewicz D, Pollender A, Kumpf A, Marsden SR, Bento I, Jarzębski AB, Szymańska K, Chruściel A, Tischler D, Schoevaart R, Hanefeld U, Hagedoorn PL. Leloir Glycosyltransferases in Applied Biocatalysis: A Multidisciplinary Approach. Int J Mol Sci 2019; 20:ijms20215263. [PMID: 31652818 PMCID: PMC6861944 DOI: 10.3390/ijms20215263] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2019] [Revised: 10/17/2019] [Accepted: 10/18/2019] [Indexed: 01/13/2023] Open
Abstract
Enzymes are nature’s catalyst of choice for the highly selective and efficient coupling of carbohydrates. Enzymatic sugar coupling is a competitive technology for industrial glycosylation reactions, since chemical synthetic routes require extensive use of laborious protection group manipulations and often lack regio- and stereoselectivity. The application of Leloir glycosyltransferases has received considerable attention in recent years and offers excellent control over the reactivity and selectivity of glycosylation reactions with unprotected carbohydrates, paving the way for previously inaccessible synthetic routes. The development of nucleotide recycling cascades has allowed for the efficient production and reuse of nucleotide sugar donors in robust one-pot multi-enzyme glycosylation cascades. In this way, large glycans and glycoconjugates with complex stereochemistry can be constructed. With recent advances, LeLoir glycosyltransferases are close to being applied industrially in multi-enzyme, programmable cascade glycosylations.
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Affiliation(s)
- Luuk Mestrom
- Department of Biotechnology, Delft University of Technology, Section Biocatalysis, Van der Maasweg 9, 2629 HZ Delft, The Netherlands.
| | - Marta Przypis
- Department of Organic Chemistry, Bioorganic Chemistry and Biotechnology, Silesian University of Technology, B. Krzywoustego 4, 44-100 Gliwice, Poland.
- Biotechnology Center, Silesian University of Technology, B. Krzywoustego 8, 44-100 Gliwice, Poland.
| | - Daria Kowalczykiewicz
- Department of Organic Chemistry, Bioorganic Chemistry and Biotechnology, Silesian University of Technology, B. Krzywoustego 4, 44-100 Gliwice, Poland.
- Biotechnology Center, Silesian University of Technology, B. Krzywoustego 8, 44-100 Gliwice, Poland.
| | - André Pollender
- Environmental Microbiology, Institute of Biosciences, TU Bergakademie Freiberg, Leipziger Str. 29, 09599 Freiberg, Germany.
| | - Antje Kumpf
- Environmental Microbiology, Institute of Biosciences, TU Bergakademie Freiberg, Leipziger Str. 29, 09599 Freiberg, Germany.
- Microbial Biotechnology, Faculty of Biology & Biotechnology, Ruhr-Universität Bochum, Universitätsstr. 150, 44780 Bochum, Germany.
| | - Stefan R Marsden
- Department of Biotechnology, Delft University of Technology, Section Biocatalysis, Van der Maasweg 9, 2629 HZ Delft, The Netherlands.
| | - Isabel Bento
- EMBL Hamburg, Notkestraβe 85, 22607 Hamburg, Germany.
| | - Andrzej B Jarzębski
- Institute of Chemical Engineering, Polish Academy of Sciences, Bałtycka 5, 44-100 Gliwice, Poland.
| | - Katarzyna Szymańska
- Department of Chemical and Process Engineering, Silesian University of Technology, Ks. M. Strzody 7, 44-100 Gliwice, Poland.
| | | | - Dirk Tischler
- Environmental Microbiology, Institute of Biosciences, TU Bergakademie Freiberg, Leipziger Str. 29, 09599 Freiberg, Germany.
- Microbial Biotechnology, Faculty of Biology & Biotechnology, Ruhr-Universität Bochum, Universitätsstr. 150, 44780 Bochum, Germany.
| | - Rob Schoevaart
- ChiralVision, J.H. Oortweg 21, 2333 CH Leiden, The Netherlands.
| | - Ulf Hanefeld
- Department of Biotechnology, Delft University of Technology, Section Biocatalysis, Van der Maasweg 9, 2629 HZ Delft, The Netherlands.
| | - Peter-Leon Hagedoorn
- Department of Biotechnology, Delft University of Technology, Section Biocatalysis, Van der Maasweg 9, 2629 HZ Delft, The Netherlands.
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4
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Hydrolysis of Glycosyl Thioimidates by Glycoside Hydrolase Requires Remote Activation for Efficient Activity. Catalysts 2019. [DOI: 10.3390/catal9100826] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Abstract
Chemoenzymatic synthesis of glycosides relies on efficient glycosyl donor substrates able to react rapidly and efficiently, yet with increased stability towards chemical or enzymatic hydrolysis. In this context, glycosyl thioimidates have previously been used as efficient donors, in the case of hydrolysis or thioglycoligation. In both cases, the release of the thioimidoyl aglycone was remotely activated through a protonation driven by a carboxylic residue in the active site of the corresponding enzymes. A recombinant glucosidase (DtGly) from Dictyoglomus themophilum, previously used in biocatalysis, was also able to use such glycosyl thioimidates as substrates. Yet, enzymatic kinetic values analysis, coupled to mutagenesis and in silico modelling of DtGly/substrate complexes demonstrated that the release of the thioimidoyl moiety during catalysis is only driven by its leaving group ability, without the activation of a remote protonation. In the search of efficient glycosyl donors, glycosyl thioimidates are attractive and efficient. Their utility, however, is limited to enzymes able to promote leaving group release by remote activation.
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5
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Galactofuranosidase from JHA 19 Streptomyces sp.: subcloning and biochemical characterization. Carbohydr Res 2019; 480:35-41. [PMID: 31174175 DOI: 10.1016/j.carres.2019.05.011] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2019] [Revised: 05/16/2019] [Accepted: 05/22/2019] [Indexed: 02/06/2023]
Abstract
Despite the crucial role of the rare galactofuranose (Galf) in many pathogenic micro-organisms and our increased knowledge of its metabolism, there is still a lack of recombinant and efficient galactofuranoside hydrolase available for chemo-enzymatic synthetic purposes of specific galactofuranosyl-conjugates. Subcloning of the Galf-ase from JHA 19 Streptomyces sp. and its further overexpression lead us to the production of this enzyme with a yield of 0.5 mg/L of culture. It exhibits substrate specificity exclusively towards pNP β-d-Galf, giving a KM value of 250 μM, and the highest enzymatic efficiency ever observed of 14 mM-1 s-1. It proved to be stable to temperature up to 60 °C and to at least 4 freeze-thaw's cycles. Thus, Galf-ase demonstrated to be an efficient and stable biocatalyst with greatly improved specificity toward the galactofuranosyl entity, thus paving the way to the further development of transglycosylation and thioligation reactions.
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6
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Pavic Q, Pillot A, Tasseau O, Legentil L, Tranchimand S. Improvement of the versatility of an arabinofuranosidase against galactofuranose for the synthesis of galactofuranoconjugates. Org Biomol Chem 2019; 17:6799-6808. [DOI: 10.1039/c9ob01162e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
A new performant biocatalyst was developed for the synthesis ofO-,S- and acyl-galactofuranoconjugates.
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Affiliation(s)
- Quentin Pavic
- Univ Rennes
- Ecole Nationale Supérieure de Chimie de Rennes
- CNRS
- ISCR – UMR 6226
- F-35000 Rennes
| | - Aline Pillot
- Univ Rennes
- Ecole Nationale Supérieure de Chimie de Rennes
- CNRS
- ISCR – UMR 6226
- F-35000 Rennes
| | - Olivier Tasseau
- Univ Rennes
- Ecole Nationale Supérieure de Chimie de Rennes
- CNRS
- ISCR – UMR 6226
- F-35000 Rennes
| | - Laurent Legentil
- Univ Rennes
- Ecole Nationale Supérieure de Chimie de Rennes
- CNRS
- ISCR – UMR 6226
- F-35000 Rennes
| | - Sylvain Tranchimand
- Univ Rennes
- Ecole Nationale Supérieure de Chimie de Rennes
- CNRS
- ISCR – UMR 6226
- F-35000 Rennes
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7
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Pavic Q, Tranchimand S, Lemiègre L, Legentil L. Diversion of a thioglycoligase for the synthesis of 1-O-acyl arabinofuranoses. Chem Commun (Camb) 2018; 54:5550-5553. [DOI: 10.1039/c8cc01726c] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
An arabinofuranosylhydrolase from the GH51 family was transformed into an acyl transferase by mutation of the catalytic acid/base amino acid.
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Affiliation(s)
- Quentin Pavic
- Univ Rennes
- Ecole Nationale Supérieure de Chimie de Rennes
- CNRS
- ISCR – UMR 6226
- F-35000 Rennes
| | - Sylvain Tranchimand
- Univ Rennes
- Ecole Nationale Supérieure de Chimie de Rennes
- CNRS
- ISCR – UMR 6226
- F-35000 Rennes
| | - Loïc Lemiègre
- Univ Rennes
- Ecole Nationale Supérieure de Chimie de Rennes
- CNRS
- ISCR – UMR 6226
- F-35000 Rennes
| | - Laurent Legentil
- Univ Rennes
- Ecole Nationale Supérieure de Chimie de Rennes
- CNRS
- ISCR – UMR 6226
- F-35000 Rennes
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8
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Cai D, Yao Y, Tang Y, Wang Z, Shi W, Huang W, Ding K. A Concise Synthesis of Three Branches Derived from Polysaccharide RN1 and Anti-Pancreatic Cancer Activity Study. Polymers (Basel) 2017; 9:polym9100536. [PMID: 30965840 PMCID: PMC6418633 DOI: 10.3390/polym9100536] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Revised: 10/05/2017] [Accepted: 10/18/2017] [Indexed: 02/05/2023] Open
Abstract
RN1, a polysaccharide from flowers of Panax pseudo-ginsieng Wall. Var. notoginseng (Burkill) Hoo & Tseng, is a potential multi-targeting drug candidate for pancreatic cancer treatment. However, the active targeting domain of RN1 is still unknown. Herein, three RN1 derived branches were synthesized via [3+2] or [2+2] strategies, efficiently. Two pentasaccharides, 18 and 27, showed similar inhibition effect on pancreatic cancer BxPC-3 cells to that of RN1 at same concentration. Interestingly, tetrasaccharide 21 potently inhibited gemcitabineresistant cell line Panc-1 at high concentration. These suggest that the branches of RN1 might be the active targeting domain and tetrasaccharide 21 might be a potential leading compound for pancreatic cancer with gemcitabine resistance.
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Affiliation(s)
- Deqin Cai
- University of Chinese Academy of Sciences, No.19A Yuquan Road, Beijing 100049, China.
- Glycochemistry and Glycobiology Lab, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Shanghai 201203, China.
| | - Yanli Yao
- University of Chinese Academy of Sciences, No.19A Yuquan Road, Beijing 100049, China.
- Glycochemistry and Glycobiology Lab, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Shanghai 201203, China.
| | - Yubo Tang
- CAS Key Laboratory of Receptor Research, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Pudong, Shanghai 201203, China.
- Key Laboratory of Structure-Based Drug Design and Discovery, Ministry of Education, Shenyang Pharmaceutical University, Shenyang 110016, China.
| | - Zheng Wang
- Glycochemistry and Glycobiology Lab, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Shanghai 201203, China.
- Nano Science and Technology Institute, University of Science and Technology of China, 96 Jin Zhai Road, Hefei 230026, China.
| | - Wei Shi
- University of Chinese Academy of Sciences, No.19A Yuquan Road, Beijing 100049, China.
- CAS Key Laboratory of Receptor Research, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Pudong, Shanghai 201203, China.
| | - Wei Huang
- University of Chinese Academy of Sciences, No.19A Yuquan Road, Beijing 100049, China.
- CAS Key Laboratory of Receptor Research, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Pudong, Shanghai 201203, China.
| | - Kan Ding
- University of Chinese Academy of Sciences, No.19A Yuquan Road, Beijing 100049, China.
- Glycochemistry and Glycobiology Lab, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Shanghai 201203, China.
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9
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Ati J, Lafite P, Daniellou R. Enzymatic synthesis of glycosides: from natural O- and N-glycosides to rare C- and S-glycosides. Beilstein J Org Chem 2017; 13:1857-1865. [PMID: 29062404 PMCID: PMC5629408 DOI: 10.3762/bjoc.13.180] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2017] [Accepted: 08/17/2017] [Indexed: 01/02/2023] Open
Abstract
Carbohydrate related enzymes, like glycosyltransferases and glycoside hydrolases, are nowadays more easily accessible and are thought to represent powerful and greener alternatives to conventional chemical glycosylation procedures. The knowledge of their corresponding mechanisms has already allowed the development of efficient biocatalysed syntheses of complex O-glycosides. These enzymes can also now be applied to the formation of rare or unnatural glycosidic linkages.
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Affiliation(s)
- Jihen Ati
- ICOA UMR CNRS 7311, University of Orléans, rue de Chartres, BP 6759, 45067 Orléans cedex 2, France
| | - Pierre Lafite
- ICOA UMR CNRS 7311, University of Orléans, rue de Chartres, BP 6759, 45067 Orléans cedex 2, France
| | - Richard Daniellou
- ICOA UMR CNRS 7311, University of Orléans, rue de Chartres, BP 6759, 45067 Orléans cedex 2, France
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10
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Guillotin L, Richet N, Lafite P, Daniellou R. Is the acid/base catalytic residue mutation in β- d -mannosidase Dt Man from Dictyoglomus thermophilum sufficient enough to provide thioglycoligase activity? Biochimie 2017; 137:190-196. [DOI: 10.1016/j.biochi.2017.03.020] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2017] [Accepted: 03/31/2017] [Indexed: 10/19/2022]
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11
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Tshililo NO, Strazzulli A, Cobucci-Ponzano B, Maurelli L, Iacono R, Bedini E, Corsaro MM, Strauss E, Moracci M. The α-Thioglycoligase Derived from a GH89 α-N-Acetylglucosaminidase Synthesises α-N-Acetylglucosamine-Based Glycosides of Biomedical Interest. Adv Synth Catal 2017. [DOI: 10.1002/adsc.201601091] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Ndivhuwo Olga Tshililo
- Department of Biochemistry; Stellenbosch University; Private Bag X1 7602 Matieland South Africa
| | - Andrea Strazzulli
- Institute of Biosciences and Bioresources - National Research Council of Italy; Via P. Castellino 111 80131 Naples Italy
| | - Beatrice Cobucci-Ponzano
- Institute of Biosciences and Bioresources - National Research Council of Italy; Via P. Castellino 111 80131 Naples Italy
| | - Luisa Maurelli
- Institute of Biosciences and Bioresources - National Research Council of Italy; Via P. Castellino 111 80131 Naples Italy
| | - Roberta Iacono
- Institute of Biosciences and Bioresources - National Research Council of Italy; Via P. Castellino 111 80131 Naples Italy
| | - Emiliano Bedini
- Department of Chemical Sciences; University of Naples “Federico II”, Complesso Universitario di Monte S. Angelo; Via Cupa Nuova Cinthia 21 80126 Napoli Italy
| | - Maria Michela Corsaro
- Department of Chemical Sciences; University of Naples “Federico II”, Complesso Universitario di Monte S. Angelo; Via Cupa Nuova Cinthia 21 80126 Napoli Italy
| | - Erick Strauss
- Department of Biochemistry; Stellenbosch University; Private Bag X1 7602 Matieland South Africa
| | - Marco Moracci
- Institute of Biosciences and Bioresources - National Research Council of Italy; Via P. Castellino 111 80131 Naples Italy
- Department of Biology; University of Naples “Federico II”, Complesso Universitario di Monte S. Angelo; Via Cupa Nuova Cinthia 21 80126 Napoli Italy
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12
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Marroun S, Montaut S, Marquès S, Lafite P, Coadou G, Rollin P, Jousset G, Schuler M, Tatibouët A, Oulyadi H, Daniellou R. UGT74B1 from Arabidopsis thaliana as a versatile biocatalyst for the synthesis of desulfoglycosinolates. Org Biomol Chem 2016; 14:6252-61. [DOI: 10.1039/c6ob01003b] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
A glucosyltransferase is able to catalyze the formation of the thioglycosidic bond and lead to desulfoglycosinolates.
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Affiliation(s)
- Sami Marroun
- Normandie Univ
- COBRA
- UMR 6014 et FR 3038; Univ Rouen; INSA Rouen; CNRS
- IRCOF
- 76821 Mont Saint Aignan Cedex
| | - Sabine Montaut
- Department of Chemistry and Biochemistry
- Biomolecular Sciences Programme
- Laurentian University
- Sudbury
- Canada
| | | | | | - Gaël Coadou
- Normandie Univ
- COBRA
- UMR 6014 et FR 3038; Univ Rouen; INSA Rouen; CNRS
- IRCOF
- 76821 Mont Saint Aignan Cedex
| | | | | | | | | | - Hassan Oulyadi
- Normandie Univ
- COBRA
- UMR 6014 et FR 3038; Univ Rouen; INSA Rouen; CNRS
- IRCOF
- 76821 Mont Saint Aignan Cedex
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13
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Coyle T, Brumer H, Stubbs KA. An improved preparation of some aryl α-l-arabinofuranosides for use as chromogenic substrates for α-l-arabinofuranosidases. CAN J CHEM 2015. [DOI: 10.1139/cjc-2015-0227] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A short, robust, and expedient synthesis of various aryl α-l-arabinofuranosides using a trichloroacetimidate precursor is described. The procedure is compatible with a range of phenols with varying pKa values and may be amenable for preparing a wide range of other glycosides.
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Affiliation(s)
- Travis Coyle
- School of Chemistry and Biochemistry, the University of Western Australia, Crawley, WA 6009, Australia
| | - Harry Brumer
- Michael Smith Laboratories and Department of Chemistry, University of British Columbia, Vancouver, BC V6T 1Z4, Canada
| | - Keith A. Stubbs
- School of Chemistry and Biochemistry, the University of Western Australia, Crawley, WA 6009, Australia
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14
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Bissaro B, Durand J, Biarnés X, Planas A, Monsan P, O’Donohue MJ, Fauré R. Molecular Design of Non-Leloir Furanose-Transferring Enzymes from an α-l-Arabinofuranosidase: A Rationale for the Engineering of Evolved Transglycosylases. ACS Catal 2015. [DOI: 10.1021/acscatal.5b00949] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Bastien Bissaro
- Université
de Toulouse; INSA, UPS, INP; LISBP, 135 Avenue de Rangueil, F-31077 Toulouse, France
- INRA, UMR792,
Ingénierie des Systèmes Biologiques et des Procédés, F-31400 Toulouse, France
- CNRS, UMR5504, F-31400 Toulouse, France
| | - Julien Durand
- Université
de Toulouse; INSA, UPS, INP; LISBP, 135 Avenue de Rangueil, F-31077 Toulouse, France
- INRA, UMR792,
Ingénierie des Systèmes Biologiques et des Procédés, F-31400 Toulouse, France
- CNRS, UMR5504, F-31400 Toulouse, France
| | - Xevi Biarnés
- Laboratory
of Biochemistry, Institut Químic de Sarrià, Universitat Ramon Llull, Via Augusta, 08017 Barcelona, Spain
| | - Antoni Planas
- Laboratory
of Biochemistry, Institut Químic de Sarrià, Universitat Ramon Llull, Via Augusta, 08017 Barcelona, Spain
| | - Pierre Monsan
- Université
de Toulouse; INSA, UPS, INP; LISBP, 135 Avenue de Rangueil, F-31077 Toulouse, France
- INRA, UMR792,
Ingénierie des Systèmes Biologiques et des Procédés, F-31400 Toulouse, France
- CNRS, UMR5504, F-31400 Toulouse, France
- Toulouse White
Biotechnology, UMS INRA/INSA 1337, UMS CNRS/INSA 3582, 3 Rue des Satellites, 31400 Toulouse, France
| | - Michael J. O’Donohue
- Université
de Toulouse; INSA, UPS, INP; LISBP, 135 Avenue de Rangueil, F-31077 Toulouse, France
- INRA, UMR792,
Ingénierie des Systèmes Biologiques et des Procédés, F-31400 Toulouse, France
- CNRS, UMR5504, F-31400 Toulouse, France
| | - Régis Fauré
- Université
de Toulouse; INSA, UPS, INP; LISBP, 135 Avenue de Rangueil, F-31077 Toulouse, France
- INRA, UMR792,
Ingénierie des Systèmes Biologiques et des Procédés, F-31400 Toulouse, France
- CNRS, UMR5504, F-31400 Toulouse, France
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15
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Armstrong Z, Withers SG. Synthesis of Glycans and Glycopolymers Through Engineered Enzymes. Biopolymers 2013; 99:666-74. [DOI: 10.1002/bip.22335] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2013] [Revised: 06/19/2013] [Accepted: 06/19/2013] [Indexed: 01/16/2023]
Affiliation(s)
- Zachary Armstrong
- Genome Science and Technology Program; University of British Columbia; Canada
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16
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Kaeothip S, Ishiwata A, Ito Y. Stereoselective synthesis of Arabidopsis CLAVATA3 (CLV3) glycopeptide, unique protein post-translational modifications of secreted peptide hormone in plant. Org Biomol Chem 2013; 11:5892-907. [DOI: 10.1039/c3ob41212a] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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17
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Abstract
Glycosylation represents the most complex co- and post-translational modification of proteins. In addition to N- and O-glycans, almost all combinations, including the nature of the carbohydrate moiety and the amino-acid involved, but also the type of the chemical linkage, can be isolated from natural glycoconjugates. This diversity correlates with the importance and the variety of the biological processes (and consequently the diseases) glycosides are involved in. This review focuses on rare and unusual glycosylation of peptides and proteins.
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Affiliation(s)
- Pierre Lafite
- Institut de Chimie Organique et Analytique-ICOA, Université d'Orléans, UMR CNRS 7311, Rue de Chartres, BP 6759, 45067 Orléans Cedex 2, France
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18
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Chlubnova I, Legentil L, Dureau R, Pennec A, Almendros M, Daniellou R, Nugier-Chauvin C, Ferrières V. Specific and non-specific enzymes for furanosyl-containing conjugates: biosynthesis, metabolism, and chemo-enzymatic synthesis. Carbohydr Res 2012; 356:44-61. [PMID: 22554502 DOI: 10.1016/j.carres.2012.04.002] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2012] [Revised: 04/02/2012] [Accepted: 04/03/2012] [Indexed: 11/27/2022]
Abstract
There is no doubt now that the synthesis of compounds of varying complexity such as saccharides and derivatives thereof continuously grows with enzymatic methods. This review focuses on recent basic knowledge on enzymes specifically involved in the biosynthesis and degradation of furanosyl-containing polysaccharides and conjugates. Moreover, and when possible, biocatalyzed approaches, alternative to standard synthesis, will be detailed in order to strengthen the high potential of these biocatalysts to go further with the preparation of rare furanosides. Interesting results will be also proposed with chemo-enzymatic processes based on nonfuranosyl-specific enzymes.
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Affiliation(s)
- Ilona Chlubnova
- Ecole Nationale Supérieure de Chimie de Rennes, CNRS, UMR 6226, Avenue du Général Leclerc, CS 50837, 35708 Rennes Cedex 7, France
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19
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