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1
Suzuki Y, Ménager H, Brancotte B, Vernet R, Nerin C, Boetto C, Auvergne A, Linhard C, Torchet R, Lechat P, Troubat L, Cho MH, Bouzigon E, Aschard H, Julienne H. Trait selection strategy in multi-trait GWAS: Boosting SNP discoverability. HGG ADVANCES 2024;5:100319. [PMID: 38872309 PMCID: PMC11260573 DOI: 10.1016/j.xhgg.2024.100319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Revised: 06/11/2024] [Accepted: 06/11/2024] [Indexed: 06/15/2024]  Open
2
Suzuki Y, Ménager H, Brancotte B, Vernet R, Nerin C, Boetto C, Auvergne A, Linhard C, Torchet R, Lechat P, Troubat L, Cho MH, Bouzigon E, Aschard H, Julienne H. Trait selection strategy in multi-trait GWAS: Boosting SNPs discoverability. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.10.27.564319. [PMID: 37961722 PMCID: PMC10634875 DOI: 10.1101/2023.10.27.564319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2023]
3
Durai P, Lee SJ, Lee JW, Pan CH, Park K. Iterative machine learning-based chemical similarity search to identify novel chemical inhibitors. J Cheminform 2023;15:86. [PMID: 37742003 PMCID: PMC10517535 DOI: 10.1186/s13321-023-00760-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 09/12/2023] [Indexed: 09/25/2023]  Open
4
Borges-Miranda A, Silva-Mata FJ, Talavera-Bustamante I, Jiménez-Chacón J, Álvarez-Prieto M, Pérez-Martínez CS. The role of chemosensory relationships to improve raw materials’ selection for Premium cigar manufacture. CHEMICAL PAPERS 2021. [DOI: 10.1007/s11696-021-01577-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
5
Cozzolino D. From consumers' science to food functionality-Challenges and opportunities for vibrational spectroscopy. ADVANCES IN FOOD AND NUTRITION RESEARCH 2021;97:119-146. [PMID: 34311898 DOI: 10.1016/bs.afnr.2021.03.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
6
Wang T, Liu M, Huang S, Yuan H, Zhao J, Chen J. Surface-enhanced Raman spectroscopy method for classification of doxycycline hydrochloride and tylosin in duck meat using gold nanoparticles. Poult Sci 2021;100:101165. [PMID: 33975036 PMCID: PMC8131734 DOI: 10.1016/j.psj.2021.101165] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2020] [Revised: 03/19/2021] [Accepted: 03/22/2021] [Indexed: 01/10/2023]  Open
7
Huo J, Ma Y, Lu C, Li C, Duan K, Li H. Mahalanobis distance based similarity regression learning of NIRS for quality assurance of tobacco product with different variable selection methods. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021;251:119364. [PMID: 33493932 DOI: 10.1016/j.saa.2020.119364] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2020] [Revised: 12/13/2020] [Accepted: 12/17/2020] [Indexed: 06/12/2023]
8
Ortiz-Herrero L, Cardaba I, Bartolomé L, Alonso M, Maguregui M. Extension study of a statistical age prediction model for acrylic paints. Polym Degrad Stab 2020. [DOI: 10.1016/j.polymdegradstab.2020.109263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
9
Cozzolino D. The Sample, the Spectra and the Maths-The Critical Pillars in the Development of Robust and Sound Applications of Vibrational Spectroscopy. Molecules 2020;25:E3674. [PMID: 32806655 PMCID: PMC7466136 DOI: 10.3390/molecules25163674] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Revised: 08/03/2020] [Accepted: 08/07/2020] [Indexed: 12/02/2022]  Open
10
Chen H, Liu X, Chen A, Cai K, Lin B. Parametric-scaling optimization of pretreatment methods for the determination of trace/quasi-trace elements based on near infrared spectroscopy. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020;229:117959. [PMID: 31884401 DOI: 10.1016/j.saa.2019.117959] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2019] [Revised: 12/13/2019] [Accepted: 12/13/2019] [Indexed: 06/10/2023]
11
A Machine Learning Approach for Efficient Selection of Enzyme Concentrations and Its Application for Flux Optimization. Catalysts 2020. [DOI: 10.3390/catal10030291] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]  Open
12
Tkachev V, Sorokin M, Borisov C, Garazha A, Buzdin A, Borisov N. Flexible Data Trimming Improves Performance of Global Machine Learning Methods in Omics-Based Personalized Oncology. Int J Mol Sci 2020;21:ijms21030713. [PMID: 31979006 PMCID: PMC7037338 DOI: 10.3390/ijms21030713] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Revised: 01/16/2020] [Accepted: 01/17/2020] [Indexed: 12/21/2022]  Open
13
Deep learning for vibrational spectral analysis: Recent progress and a practical guide. Anal Chim Acta 2019;1081:6-17. [PMID: 31446965 DOI: 10.1016/j.aca.2019.06.012] [Citation(s) in RCA: 88] [Impact Index Per Article: 17.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Revised: 05/13/2019] [Accepted: 06/05/2019] [Indexed: 12/19/2022]
14
de Carvalho Rocha WF, Sheen DA. Determination of physicochemical properties of petroleum derivatives and biodiesel using GC/MS and chemometric methods with uncertainty estimation. FUEL (LONDON, ENGLAND) 2019;243:413-422. [PMID: 38516536 PMCID: PMC10956500 DOI: 10.1016/j.fuel.2018.12.126] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/23/2024]
15
Tkachev V, Sorokin M, Mescheryakov A, Simonov A, Garazha A, Buzdin A, Muchnik I, Borisov N. FLOating-Window Projective Separator (FloWPS): A Data Trimming Tool for Support Vector Machines (SVM) to Improve Robustness of the Classifier. Front Genet 2019;9:717. [PMID: 30697229 PMCID: PMC6341065 DOI: 10.3389/fgene.2018.00717] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2018] [Accepted: 12/21/2018] [Indexed: 01/31/2023]  Open
16
Peng Z, Li J, Li S, Pardo J, Zhou Y, Al-Youbi AO, Bashammakh AS, El-Shahawi MS, Leblanc RM. Quantification of Nucleic Acid Concentration in the Nanoparticle or Polymer Conjugates Using Circular Dichroism Spectroscopy. Anal Chem 2018;90:2255-2262. [DOI: 10.1021/acs.analchem.7b04621] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
17
Yuan LM, Chen X, Lai Y, Chen X, Shi Y, Zhu D, Li L. A Novel Strategy of Clustering Informative Variables for Quantitative Analysis of Potential Toxics Element in Tegillarca Granosa Using Laser-Induced Breakdown Spectroscopy. FOOD ANAL METHOD 2017. [DOI: 10.1007/s12161-017-1096-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
18
Palou A, Miró A, Blanco M, Larraz R, Gómez JF, Martínez T, González JM, Alcalà M. Calibration sets selection strategy for the construction of robust PLS models for prediction of biodiesel/diesel blends physico-chemical properties using NIR spectroscopy. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2017;180:119-126. [PMID: 28284157 DOI: 10.1016/j.saa.2017.03.008] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2016] [Revised: 02/28/2017] [Accepted: 03/01/2017] [Indexed: 06/06/2023]
19
Filgueiras PR, Terra LA, Castro EV, Oliveira LM, Dias JC, Poppi RJ. Prediction of the distillation temperatures of crude oils using 1H NMR and support vector regression with estimated confidence intervals. Talanta 2015;142:197-205. [DOI: 10.1016/j.talanta.2015.04.046] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2015] [Revised: 04/13/2015] [Accepted: 04/16/2015] [Indexed: 10/23/2022]
20
Wiesner K, Fuchs K, Gigler AM, Pastusiak R. Trends in Near Infrared Spectroscopy and Multivariate Data Analysis From an Industrial Perspective. ACTA ACUST UNITED AC 2014. [DOI: 10.1016/j.proeng.2014.11.292] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
21
Alves JCL, Poppi RJ. Simultaneous determination of hydrocarbon renewable diesel, biodiesel and petroleum diesel contents in diesel fuel blends using near infrared (NIR) spectroscopy and chemometrics. Analyst 2013;138:6477-87. [DOI: 10.1039/c3an00883e] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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