1
|
Lu L, Li M, Yi G, Liao L, Cheng Q, Zhu J, Zhang B, Wang Y, Chen Y, Zeng M. Screening strategies for quorum sensing inhibitors in combating bacterial infections. J Pharm Anal 2021; 12:1-14. [PMID: 35573879 PMCID: PMC9073242 DOI: 10.1016/j.jpha.2021.03.009] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Revised: 03/04/2021] [Accepted: 03/25/2021] [Indexed: 01/20/2023] Open
Abstract
Interference with quorum sensing (QS) represents an antivirulence strategy with a significant promise for the treatment of bacterial infections and a new approach to restoring antibiotic tolerance. Over the past two decades, a novel series of studies have reported that quorum quenching approaches and the discovery of quorum sensing inhibitors (QSIs) have a strong impact on the discovery of anti-infective drugs against various types of bacteria. The discovery of QSI was demonstrated to be an appropriate strategy to expand the anti-infective therapeutic approaches to complement classical antibiotics and antimicrobial agents. For the discovery of QSIs, diverse approaches exist and develop in-step with the scale of screening as well as specific QS systems. This review highlights the latest findings in strategies and methodologies for QSI screening, involving activity-based screening with bioassays, chemical methods to seek bacterial QS pathways for QSI discovery, virtual screening for QSI screening, and other potential tools for interpreting QS signaling, which are innovative routes for future efforts to discover additional QSIs to combat bacterial infections. Interference with QSrepresents a promising antivirulence strategy for the treatment of bacterial infections. The discovery ofQSIs was demonstrated as an appropriate strategy to expand the anti-infective therapeutic arsenal to complement classical antibiotics and antimicrobial agents. For the discovery of QSIs, diverse approaches exist and develop in-step with the scale of screening and targeted QS systems. Few previous reviews have summarized the strategies and approaches of QSI screening, whereas this review highlights the recent findings in QSI screening strategies and methodologies.
Collapse
Affiliation(s)
- Lan Lu
- Antibiotics Research and Re-evaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, 610000, China
- Corresponding author.
| | - Mingxing Li
- Laboratory of Molecular Pharmacology, Department of Pharmacology, School of Pharmacy, Southwest Medical University, Luzhou, 646000, Sichuan, China
| | - Guojuan Yi
- Antibiotics Research and Re-evaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, 610000, China
| | - Li Liao
- Antibiotics Research and Re-evaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, 610000, China
| | - Qiang Cheng
- Antibiotics Research and Re-evaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, 610000, China
| | - Jie Zhu
- Antibiotics Research and Re-evaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, 610000, China
| | - Bin Zhang
- Antibiotics Research and Re-evaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, 610000, China
| | - Yingying Wang
- Antibiotics Research and Re-evaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, 610000, China
| | - Yong Chen
- Antibiotics Research and Re-evaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, 610000, China
| | - Ming Zeng
- Antibiotics Research and Re-evaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, 610000, China
| |
Collapse
|
2
|
Zyuzin MV, Cassani M, Barthel MJ, Gavilan H, Silvestri N, Escudero A, Scarpellini A, Lucchesi F, Teran FJ, Parak WJ, Pellegrino T. Confining Iron Oxide Nanocubes inside Submicrometric Cavities as a Key Strategy To Preserve Magnetic Heat Losses in an Intracellular Environment. ACS APPLIED MATERIALS & INTERFACES 2019; 11:41957-41971. [PMID: 31584801 DOI: 10.1021/acsami.9b15501] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
The design of magnetic nanostructures whose magnetic heating efficiency remains unaffected at the tumor site is a fundamental requirement to further advance magnetic hyperthermia in the clinic. This work demonstrates that the confinement of magnetic nanoparticles (NPs) into a sub-micrometer cavity is a key strategy to enable a certain degree of nanoparticle motion and minimize aggregation effects, consequently preserving the magnetic heat loss of iron oxide nanocubes (IONCs) under different conditions, including intracellular environments. We fabricated magnetic layer-by-layer (LbL) self-assembled polyelectrolyte sub-micrometer capsules using three different approaches, and we studied their heating efficiency as obtained in aqueous dispersions and after internalization by tumor cells. First, IONCs were added to the hollow cavities of LbL submicrocapsules, allowing the IONCs to move to a certain extent in the capsule cavities. Second, IONCs were coencapsulated into solid calcium carbonate cores coated with LbL polymer shells. Third, IONCs were incorporated within the polymer layers of the LbL capsule walls. In aqueous solution, higher specific absorption rate (SAR) values were related to those of free IONCs, while lower SAR values were recorded for capsule/core assemblies. However, after uptake by cancer cell lines (SKOV-3 cells), the SAR values of the free IONCs were significantly lower than those observed for capsule/core assemblies, especially after prolonged incubation periods (24 and 48 h). These results show that IONCs packed into submicrocavities preserve the magnetic losses, as the SAR values remained almost invariable. Conversely, free IONCs without the protective capsule shell agglomerated and their magnetic losses were strongly reduced. Indeed, IONC-loaded capsules and free IONCs reside inside endosomal and lysosomal compartments after cellular uptake and show strongly reduced magnetic losses due to the immobilization and aggregation in centrosymmetrical structures in the intracellular vesicles. The confinement of IONCs into sub-micrometer cavities is a key strategy to provide a sustained and predictable heating dose inside biological matrices.
Collapse
Affiliation(s)
- Mikhail V Zyuzin
- Istituto Italiano di Tecnologia , Via Morego 30 , 16163 Genova , Italy
- Faculty of Physics and Engineering , ITMO University , Lomonosova 9 , 191023 St. Petersburg , Russia
| | - Marco Cassani
- Istituto Italiano di Tecnologia , Via Morego 30 , 16163 Genova , Italy
- Dipartimento di Chimica , Università di Genova , Via Dodecaneso 33 , 16146 Genova , Italy
| | - Markus J Barthel
- Istituto Italiano di Tecnologia , Via Morego 30 , 16163 Genova , Italy
| | - Helena Gavilan
- Istituto Italiano di Tecnologia , Via Morego 30 , 16163 Genova , Italy
| | - Niccolò Silvestri
- Istituto Italiano di Tecnologia , Via Morego 30 , 16163 Genova , Italy
- Dipartimento di Chimica , Università di Genova , Via Dodecaneso 33 , 16146 Genova , Italy
| | - Alberto Escudero
- Leibniz Institute for New Materials , Campus D2 2, D-66123 Saarbrücken , Germany
- Departamento de Química Inorgánica and Instituto de Investigaciones Químicas (IIQ) , Universidad de Sevilla-CSIC , Calle Américo Vespucio 49 , E-41092 Seville , Spain
| | - Alice Scarpellini
- Istituto Italiano di Tecnologia , Via Morego 30 , 16163 Genova , Italy
| | - Federica Lucchesi
- Istituto Italiano di Tecnologia , Via Morego 30 , 16163 Genova , Italy
- Dipartimento di Informatica,B ioingegneria, Robotica e Ingegneria dei Sistemi (DIBRIS) , Via all'Opera Pia, 13 , 16145 Genova , Italy
| | - Francisco J Teran
- iMdea Nanociencia , Campus Universitario de Cantoblanco , 28049 Madrid , Spain
- Nanobiotecnología (iMdea-Nanociencia) , Unidad Asociada al Centro Nacional de Biotecnología (CSIC) , 28049 Madrid , Spain
| | - Wolfgang J Parak
- Faculty of Physics and Chemistry and CHyN , Universität Hamburg , 20146 Hamburg , Germany
| | - Teresa Pellegrino
- Istituto Italiano di Tecnologia , Via Morego 30 , 16163 Genova , Italy
| |
Collapse
|
3
|
Avugadda SK, Materia ME, Nigmatullin R, Cabrera D, Marotta R, Cabada TF, Marcello E, Nitti S, Artés-Ibañez EJ, Basnett P, Wilhelm C, Teran FJ, Roy I, Pellegrino T. Esterase-Cleavable 2D Assemblies of Magnetic Iron Oxide Nanocubes: Exploiting Enzymatic Polymer Disassembling To Improve Magnetic Hyperthermia Heat Losses. CHEMISTRY OF MATERIALS : A PUBLICATION OF THE AMERICAN CHEMICAL SOCIETY 2019; 31:5450-5463. [PMID: 31631940 PMCID: PMC6795213 DOI: 10.1021/acs.chemmater.9b00728] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2019] [Revised: 06/25/2019] [Indexed: 05/24/2023]
Abstract
Here, we report a nanoplatform based on iron oxide nanocubes (IONCs) coated with a bioresorbable polymer that, upon exposure to lytic enzymes, can be disassembled increasing the heat performances in comparison with the initial clusters. We have developed two-dimensional (2D) clusters by exploiting benchmark IONCs as heat mediators for magnetic hyperthermia and a polyhydroxyalkanoate (PHA) copolymer, a biodegradable polymer produced by bacteria that can be digested by intracellular esterase enzymes. The comparison of magnetic heat performance of the 2D assemblies with 3D centrosymmetrical assemblies or single IONCs emphasizes the benefit of the 2D assembly. Moreover, the heat losses of 2D assemblies dispersed in water are better than the 3D assemblies but worse than for single nanocubes. On the other hand, when the 2D magnetic beads (2D-MNBs) are incubated with the esterase enzyme at a physiological temperature, their magnetic heat performances began to progressively increase. After 2 h of incubation, specific absorption rate values of the 2D assembly double the ones of individually coated nanocubes. Such an increase can be mainly correlated to the splitting of the 2D-MNBs into smaller size clusters with a chain-like configuration containing few nanocubes. Moreover, 2D-MNBs exhibited nonvariable heat performances even after intentionally inducing their aggregation. Magnetophoresis measurements indicate a comparable response of 3D and 2D clusters to external magnets (0.3 T) that is by far faster than that of single nanocubes. This feature is crucial for a physical accumulation of magnetic materials in the presence of magnetic field gradients. This system is the first example of a nanoplatform that, upon exposure to lytic enzymes, such as those present in a tumor environment, can be disassembled from the initial 2D-MNB organization to chain-like assemblies with clear improvement of the heat magnetic losses resulting in better heat dissipation performances. The potential application of 2D nanoassemblies based on the cleavable PHAs for preserving their magnetic losses inside cells will benefit hyperthermia therapies mediated by magnetic nanoparticles under alternating magnetic fields.
Collapse
Affiliation(s)
- Sahitya Kumar Avugadda
- Istituto Italiano
di Tecnologia, via Morego 30, 16163 Genoa, Italy
- Dipartimento di Chimica
e Chimica Industriale, Università
di Genova, Via Dodecaneso,
31, 16146 Genova, Italy
| | | | - Rinat Nigmatullin
- School of Life Sciences, College of Liberal
Arts and Sciences, University of Westminster, New Cavendish Street, London W1W 6UW, U.K.
| | - David Cabrera
- iMdea Nanociencia, Campus Universitario de Cantoblanco, C/ Faraday 9, 28049 Madrid, Spain
| | - Roberto Marotta
- Istituto Italiano
di Tecnologia, via Morego 30, 16163 Genoa, Italy
| | | | - Elena Marcello
- School of Life Sciences, College of Liberal
Arts and Sciences, University of Westminster, New Cavendish Street, London W1W 6UW, U.K.
| | - Simone Nitti
- Istituto Italiano
di Tecnologia, via Morego 30, 16163 Genoa, Italy
| | - Emilio J. Artés-Ibañez
- iMdea Nanociencia, Campus Universitario de Cantoblanco, C/ Faraday 9, 28049 Madrid, Spain
| | - Pooja Basnett
- School of Life Sciences, College of Liberal
Arts and Sciences, University of Westminster, New Cavendish Street, London W1W 6UW, U.K.
| | - Claire Wilhelm
- Laboratoire Matière et Systèmes Complexes
(MSC) UMR 7057 CNRS and Université Paris Diderot, 75205 Paris Cedex
05, France
| | - Francisco J. Teran
- iMdea Nanociencia, Campus Universitario de Cantoblanco, C/ Faraday 9, 28049 Madrid, Spain
- Unidad Asociada al Centro Nacional de Biotecnología
(CSIC), Nanobiotecnología (iMdea
Nanociencia), 28049 Madrid, Spain
| | - Ipsita Roy
- School of Life Sciences, College of Liberal
Arts and Sciences, University of Westminster, New Cavendish Street, London W1W 6UW, U.K.
| | | |
Collapse
|
4
|
Duarte LGTA, Germino JC, Braga CDÁ, Barboza CA, Atvars TDZ, Santos FDS, Rodembusch FS. Photoacidity as a tool to rationalize excited state intramolecular proton transfer reactivity in flavonols. Photochem Photobiol Sci 2018; 17:231-238. [DOI: 10.1039/c7pp00334j] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Determination of acidic strengths at the electronic ground and excited states of flavonol derivatives.
Collapse
Affiliation(s)
| | | | - Cláudia de Ávila Braga
- Grupo de Pesquisa em Fotoquímica Orgânica Aplicada
- Universidade Federal do Rio Grande do Sul
- Instituto de Química
- Porto Alegre
- Brazil
| | | | | | - Fabiano da Silveira Santos
- Grupo de Pesquisa em Fotoquímica Orgânica Aplicada
- Universidade Federal do Rio Grande do Sul
- Instituto de Química
- Porto Alegre
- Brazil
| | - Fabiano Severo Rodembusch
- Grupo de Pesquisa em Fotoquímica Orgânica Aplicada
- Universidade Federal do Rio Grande do Sul
- Instituto de Química
- Porto Alegre
- Brazil
| |
Collapse
|
5
|
Kratochvil MJ, Yang T, Blackwell HE, Lynn DM. Nonwoven Polymer Nanofiber Coatings That Inhibit Quorum Sensing in Staphylococcus aureus: Toward New Nonbactericidal Approaches to Infection Control. ACS Infect Dis 2017; 3:271-280. [PMID: 28118541 PMCID: PMC5392134 DOI: 10.1021/acsinfecdis.6b00173] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
We report the fabrication and biological evaluation of nonwoven polymer nanofiber coatings that inhibit quorum sensing (QS) and virulence in the human pathogen Staphylococcus aureus. Our results demonstrate that macrocyclic peptide 1, a potent and synthetic nonbactericidal quorum sensing inhibitor (QSI) in S. aureus, can be loaded into degradable polymer nanofibers by electrospinning and that this approach can deposit QSI-loaded nanofiber coatings onto model nonwoven mesh substrates. The QSI was released over ∼3 weeks when these materials were incubated in physiological buffer, retained its biological activity, and strongly inhibited agr-based QS in a GFP reporter strain of S. aureus for at least 14 days without promoting cell death. These materials also inhibited production of hemolysins, a QS-controlled virulence phenotype, and reduced the lysis of erythrocytes when placed in contact with wild-type S. aureus growing on surfaces. This approach is modular and can be used with many different polymers, active agents, and processing parameters to fabricate nanofiber coatings on surfaces important in healthcare contexts. S. aureus is one of the most common causative agents of bacterial infections in humans, and strains of this pathogen have developed significant resistance to conventional antibiotics. The QSI-based strategies reported here thus provide springboards for the development of new anti-infective materials and novel treatment strategies that target virulence as opposed to growth in S. aureus. This approach also provides porous scaffolds for cell culture that could prove useful in future studies on the influence of QS modulation on the development and structure of bacterial communities.
Collapse
Affiliation(s)
- Michael J. Kratochvil
- Department of Chemistry, 1101 University Avenue, University of Wisconsin–Madison, Madison, Wisconsin 53706
| | - Tian Yang
- Department of Chemistry, 1101 University Avenue, University of Wisconsin–Madison, Madison, Wisconsin 53706
| | - Helen E. Blackwell
- Department of Chemistry, 1101 University Avenue, University of Wisconsin–Madison, Madison, Wisconsin 53706
| | - David M. Lynn
- Department of Chemistry, 1101 University Avenue, University of Wisconsin–Madison, Madison, Wisconsin 53706
- Department of Chemical and Biological Engineering, 1415 Engineering Drive, University of Wisconsin–Madison, Madison, Wisconsin 53706
| |
Collapse
|
6
|
Rote JC, Malkowski SN, Cochrane CS, Bailey GE, Brown NS, Cafiero M, Peterson LW. Catechol reactivity: Synthesis of dopamine derivatives substituted at the 6-position. SYNTHETIC COMMUN 2017. [DOI: 10.1080/00397911.2016.1269350] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
| | | | | | | | - Noah S. Brown
- Department of Chemistry, Rhodes College, Memphis, TN, USA
| | | | | |
Collapse
|
7
|
Kratochvil MJ, Welsh MA, Manna U, Ortiz BJ, Blackwell HE, Lynn DM. Slippery Liquid-Infused Porous Surfaces that Prevent Bacterial Surface Fouling and Inhibit Virulence Phenotypes in Surrounding Planktonic Cells. ACS Infect Dis 2016; 2:509-17. [PMID: 27626103 PMCID: PMC5198836 DOI: 10.1021/acsinfecdis.6b00065] [Citation(s) in RCA: 68] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Surfaces that can both prevent bacterial biofouling and inhibit the expression of virulence phenotypes in surrounding planktonic bacteria are of interest in a broad range of contexts. Here, we report new slippery-liquid infused porous surfaces (SLIPS) that resist bacterial colonization (owing to inherent "slippery" surface character) and also attenuate virulence phenotypes in non-adherent cells by gradually releasing small-molecule quorum sensing inhibitors (QSIs). QSIs active against Pseudomonas aeruginosa can be loaded into SLIPS without loss of their slippery and antifouling properties, and imbedded agents can be released into surrounding media over hours to days depending on the structures of the loaded agent. This controlled-release approach is useful for inhibiting virulence factor production and can also inhibit bacterial biofilm formation on nearby, non-SLIPS-coated surfaces. Finally, we demonstrate that this approach is compatible with the simultaneous release of more than one type of QSI, enabling greater control over virulence and suggesting new opportunities to tune the antifouling properties of these slippery surfaces.
Collapse
Affiliation(s)
- Michael J Kratochvil
- Department of Chemistry and ‡Department of Chemical and Biological Engineering, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States
| | - Michael A Welsh
- Department of Chemistry and ‡Department of Chemical and Biological Engineering, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States
| | - Uttam Manna
- Department of Chemistry and ‡Department of Chemical and Biological Engineering, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States
| | - Benjamín J Ortiz
- Department of Chemistry and ‡Department of Chemical and Biological Engineering, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States
| | - Helen E Blackwell
- Department of Chemistry and ‡Department of Chemical and Biological Engineering, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States
| | - David M Lynn
- Department of Chemistry and ‡Department of Chemical and Biological Engineering, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States
| |
Collapse
|
8
|
Amara N, Gregor R, Rayo J, Dandela R, Daniel E, Liubin N, Willems HME, Ben-Zvi A, Krom BP, Meijler MM. Fine-Tuning Covalent Inhibition of Bacterial Quorum Sensing. Chembiochem 2016; 17:825-35. [PMID: 26840534 DOI: 10.1002/cbic.201500676] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2015] [Indexed: 01/04/2023]
Abstract
Emerging antibiotic resistance among human pathogens has galvanized efforts to find alternative routes to combat bacterial virulence. One new approach entails interfering with the ability of bacteria to coordinate population-wide gene expression, or quorum sensing (QS), thus inhibiting the production of virulence factors and biofilm formation. We have recently developed such a strategy by targeting LasR, the master regulator of QS in the opportunistic human pathogen Pseudomonas aeruginosa, through the rational design of covalent inhibitors closely based on the core structure of the native ligand. We now report several groups of new inhibitors, one of which, fluoro-substituted ITC-12, displayed complete covalent modification of LasR, as well as effective QS inhibition in vitro and promising in vivo results. In addition to their potential clinical relevance, this series of synthetic QS modulators can be used as a tool to further unravel the complicated QS regulation in P. aeruginosa.
Collapse
Affiliation(s)
- Neri Amara
- Department of Chemistry and, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Be'er Sheva, Israel
| | - Rachel Gregor
- Department of Chemistry and, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Be'er Sheva, Israel
| | - Josep Rayo
- Department of Chemistry and, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Be'er Sheva, Israel
| | - Rambabu Dandela
- Department of Chemistry and, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Be'er Sheva, Israel
| | - Erik Daniel
- Department of Chemistry and, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Be'er Sheva, Israel
| | - Nina Liubin
- Department of Life Sciences and, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beersheva, Israel
| | - H Marjo E Willems
- Department of Preventive Dentistry, Academic Centre for Dentistry Amsterdam, Free University Amsterdam and the University of Amsterdam, Amsterdam, The Netherlands
| | - Anat Ben-Zvi
- Department of Life Sciences and, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beersheva, Israel
| | - Bastiaan P Krom
- Department of Preventive Dentistry, Academic Centre for Dentistry Amsterdam, Free University Amsterdam and the University of Amsterdam, Amsterdam, The Netherlands
| | - Michael M Meijler
- Department of Chemistry and, The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Be'er Sheva, Israel.
| |
Collapse
|
9
|
Brackman G, Garcia-Fernandez MJ, Lenoir J, De Meyer L, Remon JP, De Beer T, Concheiro A, Alvarez-Lorenzo C, Coenye T. Dressings Loaded with Cyclodextrin-Hamamelitannin Complexes Increase Staphylococcus aureus Susceptibility Toward Antibiotics Both in Single as well as in Mixed Biofilm Communities. Macromol Biosci 2016; 16:859-69. [PMID: 26891369 DOI: 10.1002/mabi.201500437] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2015] [Revised: 01/12/2016] [Indexed: 01/16/2023]
Abstract
Bacteria reside within biofilms at the infection site, making them extremely difficult to eradicate with conventional wound care products. Bacteria use quorum sensing (QS) systems to regulate biofilm formation, and QS inhibitors (QSIs) have been proposed as promising antibiofilm agents. Despite this, few antimicrobial therapies that interfere with QS exist. Nontoxic hydroxypropyl-β-cyclodextrin-functionalized cellulose gauzes releasing a burst of the antibiotic vancomycin and the QSI hamamelitannin are developed, followed by a sustained release of both. The gauzes affect QS and biofilm formation of Pseudomonas aeruginosa and Staphylococcus aureus in an in vitro model of chronic wound infection and can be considered as candidates to be used to prevent wound infection as well as treat infected wounds.
Collapse
Affiliation(s)
- Gilles Brackman
- Laboratory of Pharmaceutical Microbiology, Faculty of Pharmaceutical Sciences, Ghent University, Ottergemsesteenweg 460, 9000, Ghent, Belgium
| | - Maria José Garcia-Fernandez
- Departamento de Farmacia y Tecnología Farmacéutica, Facultad de Farmacia, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Joke Lenoir
- Laboratory of Pharmaceutical Technology, Ghent University, Ottergemsesteenweg 460, 9000, Ghent, Belgium
| | - Laurens De Meyer
- Laboratory of Pharmaceutical Process Analytical Technology, Ghent University, Ottergemsesteenweg 460, 9000, Ghent, Belgium
| | - Jean-Paul Remon
- Laboratory of Pharmaceutical Technology, Ghent University, Ottergemsesteenweg 460, 9000, Ghent, Belgium
| | - Thomas De Beer
- Laboratory of Pharmaceutical Process Analytical Technology, Ghent University, Ottergemsesteenweg 460, 9000, Ghent, Belgium
| | - Angel Concheiro
- Departamento de Farmacia y Tecnología Farmacéutica, Facultad de Farmacia, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Carmen Alvarez-Lorenzo
- Departamento de Farmacia y Tecnología Farmacéutica, Facultad de Farmacia, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Tom Coenye
- Laboratory of Pharmaceutical Microbiology, Faculty of Pharmaceutical Sciences, Ghent University, Ottergemsesteenweg 460, 9000, Ghent, Belgium
| |
Collapse
|
10
|
Kratochvil MJ, Tal-Gan Y, Yang T, Blackwell HE, Lynn DM. Nanoporous Superhydrophobic Coatings that Promote the Extended Release of Water-Labile Quorum Sensing Inhibitors and Enable Long-Term Modulation of Quorum Sensing in Staphylococcus aureus. ACS Biomater Sci Eng 2015; 1:1039-1049. [PMID: 26501126 PMCID: PMC4604486 DOI: 10.1021/acsbiomaterials.5b00313] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2015] [Accepted: 08/26/2015] [Indexed: 11/30/2022]
Abstract
![]()
Materials and coatings that inhibit
bacterial colonization are
of interest in a broad range of biomedical, environmental, and industrial
applications. In view of the rapid increase in bacterial resistance
to conventional antibiotics, the development of new strategies that
target nonessential pathways in bacterial pathogens—and that
thereby limit growth and reduce virulence through nonbiocidal means—has
attracted considerable attention. Bacterial quorum sensing (QS) represents
one such target, and is intimately connected to virulence in many
human pathogens. Here, we demonstrate that the properties of nanoporous,
polymer-based superhydrophobic coatings can be exploited to host and
subsequently sustain the extended release of potent and water-labile
peptide-based inhibitors of QS (QSIs) in Staphylococcus aureus. Our results demonstrate that these peptidic QSIs can be released
into surrounding media for periods of at least 8 months, and that
they strongly inhibit agr-based QS in S. aureus for
at least 40 days. These results also suggest that these extremely
nonwetting coatings can confer protection against the rapid hydrolysis
of these water-labile peptides, thereby extending their useful lifetimes.
Finally, we demonstrate that these peptide-loaded superhydrophobic
coatings can strongly modulate the QS-controlled formation of biofilm
in wild-type S. aureus. These nanoporous superhydrophobic
films provide a new, useful, and nonbiocidal approach to the design
of coatings that attenuate bacterial virulence. This approach has
the potential to be general, and could prove suitable for the encapsulation,
protection, and release of other classes of water-sensitive agents.
We anticipate that the materials, strategies, and concepts reported
here will enable new approaches to the long-term attenuation of QS
and associated bacterial phenotypes in a range of basic research and
applied contexts.
Collapse
Affiliation(s)
- Michael J Kratochvil
- Department of Chemistry, 1101 University Avenue, University of Wisconsin - Madison , Madison, Wisconsin 53706, United States
| | - Yftah Tal-Gan
- Department of Chemistry, 1101 University Avenue, University of Wisconsin - Madison , Madison, Wisconsin 53706, United States
| | - Tian Yang
- Department of Chemistry, 1101 University Avenue, University of Wisconsin - Madison , Madison, Wisconsin 53706, United States
| | - Helen E Blackwell
- Department of Chemistry, 1101 University Avenue, University of Wisconsin - Madison , Madison, Wisconsin 53706, United States
| | - David M Lynn
- Department of Chemistry, 1101 University Avenue, University of Wisconsin - Madison , Madison, Wisconsin 53706, United States ; Department of Chemical and Biological Engineering, 1415 Engineering Drive, University of Wisconsin - Madison , Madison, Wisconsin 53706, United States
| |
Collapse
|
11
|
Gademann K. Copy, edit, and paste: natural product approaches to biomaterials and neuroengineering. Acc Chem Res 2015; 48:731-9. [PMID: 25719515 DOI: 10.1021/ar500435b] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Progress in the chemical sciences has formed the world we live in, both on a macroscopic and on a nanoscopic scale. The last century witnessed the development of high performance materials that interact with humans on many layers, from clothing to construction, from media to medical devices. On a molecular level, natural products and their derivatives influence many biological processes, and these compounds have enormously contributed to the health and quality of living of humans. Although coatings of stone materials with oils or resins (containing natural products) have led to improved tools already millennia ago, in contrast today, natural product approaches to designer materials, that is, combining the best of both worlds, remain scarce. In this Account, we will summarize our recent research efforts directed to the generation of natural product functionalized materials, exploiting the strategy of "copy, edit, and paste with natural products". Natural products embody the wisdom of evolution, and only total synthesis is able to unlock the secrets enshrined in their molecular structure. We employ total synthesis ("copy") as a scientific approach to address problems related to molecular structure, the biosynthesis of natural products, and their bioactivity. Additionally, the fundamental desire to investigate the mechanism of action of natural products constitutes a key driver for scientific inquiry. In an emerging area of relevance to society, we have prepared natural products such as militarinone D that can stimulate neurite outgrowth and facilitate nerve regeneration. This knowledge obtained by synthetic organic chemistry on complex natural products can then be used to design structurally simplified compounds that retain the biological power of the parent natural product ("edit"). This process, sometimes referred to as function-oriented synthesis, allows obtaining derivatives with better properties, improving their chemical tractability and reducing the step count of the synthesis. Along these lines, we have demonstrated that militarinone D can be truncated to yield structurally simplified analogs with improved activity. Finally, with the goal of designing bioactive materials, we have immobilized functionally optimized, neuritogenic natural products ("paste"). These materials could facilitate nerve regeneration, act as nerve guidance conduits, or lead to new approaches in neuroengineering. Based on the surface-adhesive properties of electron-deficient catecholates and the knowledge gathered on neuritogenic natural product derivatives, two mechanistically different design principles have been applied to generate neuritogenic materials. In conclusion, natural products, and their functionally optimized analogs, present a large, mostly untapped reservoir of powerful modulators of biological systems, and their hybridization with materials can lead to new approaches in various fields, from biofilm prevention to neuroengineering.
Collapse
Affiliation(s)
- Karl Gademann
- Department of Chemistry, University of Basel, St. Johanns-Ring
19, CH-4056 Basel, Switzerland
| |
Collapse
|
12
|
Yang J, Lin FK, Yang L, Hua DY. A bench-scale assessment for phosphorus release control of sediment by an oxygen-releasing compound (ORC). JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART A, TOXIC/HAZARDOUS SUBSTANCES & ENVIRONMENTAL ENGINEERING 2015; 50:49-59. [PMID: 25438131 DOI: 10.1080/10934529.2015.964608] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The effects of oxygen-releasing compound (ORC) on the control of phosphorus (P) release as well as the spatial and temporal distribution of P fractions in sediment were studied through a bench-scale test. An ORC with an extended oxygen-releasing capacity was prepared. The results of the oxygen-releasing test showed that the ORC provided a prolonged period of oxygen release with a highly effective oxygen content of 60.6% when compared with powdery CaO2. In the bench-scale test, an ORC dose of 180 g·m(-2) provided a higher inhibition efficiency for P release within 50 days. With the application of the ORC, the dissolved oxygen (DO) concentration and redox potential (ORP) of the overlying water were notably improved, and the dissolved total phosphorus (DTP) was maintained below 0.689 mg·L(-1) compared to 2.906 mg·L(-1) without the ORC treatment. According to the P fractions distribution, the summation of all detectable P fractions in each sediment layer exhibited an enhanced accumulation tendency with the application of ORC. Higher phosphorus retention efficiencies were observed in the second and third layers of sediment from days 10 to 20 with the ORC. Phosphorus was trapped mainly in the form of iron bound P (Fe-P) and organically bound P (O-P) in sediment with the ORC, whereas the effects of the ORC on exchangeable P (EX-P), apatite-associated P (A-P) and detrital P (De-P) in the sediment sample were not significant. The microbial activities of the sediment samples demonstrated that both the dehydrogenase activity (DHA) and alkaline phosphatase activity (APA) in the upper sediment layer increased with the ORC treatment, which indicated that the mineralization of P was accelerated and the microbial biomass was increased. As the accumulation of P suppressed the release of P, the sediment exhibited an increased P retention efficiency with the application of the ORC.
Collapse
Affiliation(s)
- Jie Yang
- a School of Resource and Environmental Engineering , East China University of Science and Technology (ECUST) , Shanghai , China
| | | | | | | |
Collapse
|
13
|
Bader SL, Luescher MU, Gademann K. Synthesis of maculalactone A and derivatives for environmental fate tracking studies. Org Biomol Chem 2015; 13:199-206. [DOI: 10.1039/c4ob02042a] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Labelled probes of the antifouling natural product, maculalactone A, allow for distribution studies in Artemia salina.
Collapse
Affiliation(s)
- Samuel L. Bader
- Department of Chemistry
- University of Basel
- 4056 Basel
- Switzerland
| | | | - Karl Gademann
- Department of Chemistry
- University of Basel
- 4056 Basel
- Switzerland
| |
Collapse
|
14
|
Burch P, Schmid F, Gademann K. Neuritogenic surfaces using natural product analogs. Adv Healthc Mater 2014; 3:1415-9. [PMID: 24596342 DOI: 10.1002/adhm.201300671] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2013] [Revised: 02/10/2014] [Indexed: 01/08/2023]
Abstract
Neuritogenic surfaces are generated by a simple dip-coating procedure, as glass slides are coated with a neurotrophin-like small organic molecule in the presence of a collagen matrix. The surfaces retain their biological activity for multiple cycles and the protocol is suitable for various substrates and coating conditions.
Collapse
Affiliation(s)
- Patrick Burch
- Department of Chemistry; University of Basel; St. Johanns-Ring 19 CH-4056 Basel Switzerland
| | - Fabian Schmid
- Department of Chemistry; University of Basel; St. Johanns-Ring 19 CH-4056 Basel Switzerland
| | - Karl Gademann
- Department of Chemistry; University of Basel; St. Johanns-Ring 19 CH-4056 Basel Switzerland
| |
Collapse
|
15
|
Antibacterial surface treatment for orthopaedic implants. Int J Mol Sci 2014; 15:13849-80. [PMID: 25116685 PMCID: PMC4159828 DOI: 10.3390/ijms150813849] [Citation(s) in RCA: 179] [Impact Index Per Article: 17.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2013] [Revised: 06/06/2014] [Accepted: 06/13/2014] [Indexed: 02/07/2023] Open
Abstract
It is expected that the projected increased usage of implantable devices in medicine will result in a natural rise in the number of infections related to these cases. Some patients are unable to autonomously prevent formation of biofilm on implant surfaces. Suppression of the local peri-implant immune response is an important contributory factor. Substantial avascular scar tissue encountered during revision joint replacement surgery places these cases at an especially high risk of periprosthetic joint infection. A critical pathogenic event in the process of biofilm formation is bacterial adhesion. Prevention of biomaterial-associated infections should be concurrently focused on at least two targets: inhibition of biofilm formation and minimizing local immune response suppression. Current knowledge of antimicrobial surface treatments suitable for prevention of prosthetic joint infection is reviewed. Several surface treatment modalities have been proposed. Minimizing bacterial adhesion, biofilm formation inhibition, and bactericidal approaches are discussed. The ultimate anti-infective surface should be “smart” and responsive to even the lowest bacterial load. While research in this field is promising, there appears to be a great discrepancy between proposed and clinically implemented strategies, and there is urgent need for translational science focusing on this topic.
Collapse
|
16
|
Thomanek H, Schenk ST, Stein E, Kogel KH, Schikora A, Maison W. Modified N-acyl-homoserine lactones as chemical probes for the elucidation of plant-microbe interactions. Org Biomol Chem 2014; 11:6994-7003. [PMID: 24057134 DOI: 10.1039/c3ob41215f] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Gram-negative bacteria often use N-acyl-homoserine lactones (AHLs) as signal molecules to monitor their local population densities and to regulate gene-expression in a process called "Quorum Sensing" (QS). This cell-to-cell communication allows bacteria to adapt to environmental changes and to behave as multicellular communities. QS plays a key role in both bacterial virulence towards the host and symbiotic interactions with other organisms. Plants also perceive AHLs and respond to them with changes in gene expression or modifications in development. Herein, we report the synthesis of new AHL-derivatives for the investigation and identification of AHL-interacting proteins. We show that our new compounds are still recognised by different bacteria and that a novel biotin-tagged-AHL derivative interacts with a bacterial AHL receptor.
Collapse
Affiliation(s)
- Heike Thomanek
- Pharmaceutical and Medicinal Chemistry, University of Hamburg, Bundesstr. 45, 20146 Hamburg, Germany.
| | | | | | | | | | | |
Collapse
|
17
|
Scutera S, Zucca M, Savoia D. Novel approaches for the design and discovery of quorum-sensing inhibitors. Expert Opin Drug Discov 2014; 9:353-66. [DOI: 10.1517/17460441.2014.894974] [Citation(s) in RCA: 68] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
|
18
|
Broderick AH, Stacy DM, Tal-Gan Y, Kratochvil MJ, Blackwell HE, Lynn DM. Surface coatings that promote rapid release of peptide-based AgrC inhibitors for attenuation of quorum sensing in Staphylococcus aureus. Adv Healthc Mater 2014; 3:97-105. [PMID: 23813683 DOI: 10.1002/adhm.201300119] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2013] [Indexed: 11/05/2022]
Abstract
Staphylococcus aureus is a major human pathogen responsible for a variety of life-threatening infections. The pathogenicity of this organism is attributed to its ability to produce a range of virulence factors and toxins, including the superantigen toxic shock syndrome toxin-1 (TSST-1). While many S. aureus infections can be treated using conventional antibiotics, strains resistant to these bactericidal agents have emerged. Approaches that suppress pathogenicity through mechanisms that are nonbactericidal (i.e., antivirulence approaches) could provide new options for treating infections, including those caused by resistant strains. Here, we report a nonbactericidal approach to suppressing pathogenicity based on the release of macrocyclic peptides (1 and 2) that inhibit the agr quorum sensing (QS) circuit in group-III S. aureus. It is demonstrated that these peptides can be immobilized on planar and complex objects (on glass slides, nonwoven meshes, or within absorbent tampons) using the rapidly dissolving polymer carboxymethylcellulose (CMC). Peptide-loaded CMC films released peptide rapidly (<5 min) and promoted strong (>95%) inhibition of the agr QS circuit without inducing cell death when incubated in the presence of a group-III S. aureus gfp-reporter strain. Peptide 1 is among the most potent inhibitors of QS in S. aureus reported to date, and the group-III QS circuit regulates production of TSST-1, the primary cause of toxic shock syndrome (TSS). These results thus suggest approaches to treat the outer covers of tampons, wound dressings, or other objects to suppress toxin production and reduce the severity of TSS in clinical and personal care contexts. Because peptide 1 also inhibits QS in S. aureus groups-I, -II, and -IV, this approach could also provide a pathway for attenuation of QS and associated virulence phenotypes in a broader range of contexts.
Collapse
Affiliation(s)
- Adam H Broderick
- Department of Chemical and Biological Engineering, 1415 Engineering Drive, University of Wisconsin-Madison, Madison, WI 53706, USA
| | | | | | | | | | | |
Collapse
|
19
|
Cebrián-Torrejón G, Mackiewicz N, Vázquez-Manrique RP, Fournet A, Figadère B, Nicolas J, Poupon E. Solution Phase and Nanoparticular Biosynthetically Inspired Interconnections in the Canthin-6-one β-Carboline Series and Study of Phenotypic Properties onC. elegans. European J Org Chem 2013. [DOI: 10.1002/ejoc.201300770] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|
20
|
Gomes J, Huber N, Grunau A, Eberl L, Gademann K. Fluorescent Labeling Agents for Quorum-Sensing Receptors (FLAQS) in Live Cells. Chemistry 2013; 19:9766-70. [DOI: 10.1002/chem.201301387] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2013] [Indexed: 11/06/2022]
|
21
|
Rabin N, Delago A, Inbal B, Krief P, Meijler MM. Tailor-made LasR agonists modulate quorum sensing in Pseudomonas aeruginosa. Org Biomol Chem 2013; 11:7155-63. [DOI: 10.1039/c3ob41377b] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
|