1
|
Martínez-Araya JI, Islas R. Analysis in silico of chemical reactivity employing the local hyper-softness in some classic aromatic compounds, boron aromatic clusters and all-metal aromatic clusters. J Comput Chem 2022; 43:29-42. [PMID: 34664736 DOI: 10.1002/jcc.26769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2021] [Revised: 08/19/2021] [Accepted: 10/04/2021] [Indexed: 11/07/2022]
Abstract
In the current work, the authors analyzed and compared the chemical behavior of some (anti)aromatic compounds. The species selected are benzene and cyclobutadiene as the aromatic and antiaromatic classical examples, respectively. Next, the anion Al 4 2 - , which is the first all-metal molecule catalogued as aromatic and its non-metallic isoelectronic analog, B 4 2 - were also analyzed. The antiaromatic clusters Al 4 4 - and B 4 4 - were studied in form of lithium salts. And the end, the non-planar B 12 boron cluster and its isoelectronic analogs ( B 11 Be - and B 11 C + ) were considered for being analyzed under the same criterium. The analysis was realized employing the following descriptors: molecular electrostatic potential and local hyper-softness to get insights concerning local reactivity when facing reagents leading to ionic or covalent interactions. The results show that all the molecules analyzed presented some specific variations in their respective local reactivity despite being labeled as aromatic compounds. This analysis provides a notion that the local reactivity is more based on the nature of the atoms and the molecular geometry than the aromatic character by itself.
Collapse
Affiliation(s)
- Jorge I Martínez-Araya
- Departamento de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello (UNAB), Santiago, Chile
| | - Rafael Islas
- Departamento de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello (UNAB), Santiago, Chile
| |
Collapse
|
2
|
Dong X, Chen C, Cui ZH. Tuning structural preference of negatively charged B16 by ionically or covalently interacting with alkali and coinage metals. Chem Phys 2021. [DOI: 10.1016/j.chemphys.2021.111315] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
|
3
|
Passadis SS, Papanikolaou MG, Elliott A, Tsiafoulis CG, Tsipis AC, Keramidas AD, Miras HN, Kabanos TA. Synthesis, Structural, and Physicochemical Characterization of a Ti 6 and a Unique Type of Zr 6 Oxo Clusters Bearing an Electron-Rich Unsymmetrical {OON} Catecholate/Oxime Ligand and Exhibiting Metalloaromaticity. Inorg Chem 2020; 59:18345-18357. [PMID: 33289378 DOI: 10.1021/acs.inorgchem.0c02959] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The chelating catechol/oxime ligand 2,3-dihydroxybenzaldehyde oxime (H3dihybo) has been used to synthesize one titanium(IV) and two zirconium(IV) compounds that have been characterized by single-crystal X-ray diffraction and 1H and 13C NMR, solid-state UV-vis, and ESI-MS spectroscopy. The reaction of TiCl4 with H3dihybo and KOH in methanol, at ambient temperature, yielded the hexanuclear titanium(IV) compound K2[TiIV6(μ3-O)2(μ-O)3(OCH3)4(CH3OH)2(μ-Hdihybo)6]·CH3OH (1), while the reaction of ZrCl4 with H3dihybo and either nBu4NOH or KOH also gave the hexanuclear zirconium(IV) compounds 2 and 3, respectively. Compounds 1-3 have the same structural motif [MIV6(μ3-Ο)2(μ-Ο)3] (M = Ti, Zr), which constitutes a unique example with a trigonal-prismatic arrangement of the six zirconium atoms, in marked contrast to the octahedral arrangement of the six zirconium atoms in all the Zr6 clusters reported thus far, and a unique Zr6 core structure. Multinuclear NMR solution measurements in methanol and water proved that the hexanuclear clusters 1 and 3 retain their integrity. The marriage of the catechol moiety with the oxime group in the ligand H3dihybo proved to be quite efficient in substantially reducing the band gaps of TiO2 and ZrO2 to 1.48 and 2.34 eV for the titanium and zirconium compounds 1 and 3, respectively. The application of 1 and 3 in photocurrent responses was investigated. ESI-MS measurements of the clusters 1 and 3 revealed the existence of the hexanuclear metal core and also the initial formation of trinuclear M3 (M = Ti, Zr) building blocks prior to their self-assembly into the hexanuclear M6 (M = Ti, Zr) species. Density functional theory (DFT) calculations of the NICSzz scan curves of these systems revealed that the triangular M3 (M = Ti, Zr) metallic ring cores exhibit pronounced metalloaromaticity. The latter depends upon the nature of the metallic center with NICSzz(1) values equal to -30 and -42 ppm for the Ti (compound 1) and Zr (compound 2) systems, respectively, comparable to the NICSzz(1) value of the benzene ring of -29.7 ppm calculated at the same level of theory.
Collapse
Affiliation(s)
| | | | - Alexander Elliott
- West CHEM, School of Chemistry, University of Glasgow, Glasgow G12 8QQ, U.K
| | | | | | | | - Haralampos N Miras
- West CHEM, School of Chemistry, University of Glasgow, Glasgow G12 8QQ, U.K
| | | |
Collapse
|
4
|
Islas R, Inostroza D, Arias-Olivares D, Zúñiga-Gutiérrez B, Poater J, Solà M. Analysis of the electronic delocalization in some isoelectronic analogues of B 12 doped with beryllium and/or carbon. Phys Chem Chem Phys 2020; 22:12245-12259. [PMID: 32432256 DOI: 10.1039/d0cp01844a] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In the current work, a new family of isoelectronic analogues to B12 is reported. The construction of this family was performed through the isoelectronic substitution principle to generate species such as B11C+, B11Be-, B10BeC, B10C22+, B10Be22- B9Be2C-, and B9BeC2+. The search for the global minimum was realized by utilizing genetic algorithms, while the induced magnetic field, electronic localization function, magnetic current densities, and multicenter aromaticity criteria were calculated to understand their electronic delocalization. Our results show that, in general, C atoms avoid hypercoordination, whereas we have found species with Be atoms located in hypercoordinated positions that are relatively stable. Our analysis of aromaticity indicates that B12 has double σ and π disk aromaticity. Mono, double or triple substitution of B by C+ or Be- reduces somewhat the aromaticity of the clusters, but less in the case of Be- substitution.
Collapse
Affiliation(s)
- Rafael Islas
- Departamento de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello, Av. República 275, Santiago, Chile. and Departamento de Química, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Blvd. Marcelino García Barragán 1421, C.P. 44430, Guadalajara, Jalisco, Mexico.
| | - Diego Inostroza
- Doctorado en Fisicoquímica Molecular, Universidad Andres Bello, Av. República 275, Santiago, Chile
| | - David Arias-Olivares
- Departamento de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello, Av. República 275, Santiago, Chile. and Center of Applied Nanoscience (CANS), Facultad de Ciencias Exactas, Universidad Andres Bello, Av. República 275, Santiago, Chile
| | - Bernardo Zúñiga-Gutiérrez
- Departamento de Química, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Blvd. Marcelino García Barragán 1421, C.P. 44430, Guadalajara, Jalisco, Mexico.
| | - Jordi Poater
- Departament de Química Inorgànica i Orgànica & IQTCUB, Universitat de Barcelona, Martí i Franquès 1-11, Barcelona 08028, Catalonia, Spain and ICREA, Pg. Lluís Companys 23, Barcelona 08010, Spain
| | - Miquel Solà
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, C/ Maria Aurèlia Capmany 69, Girona 17003, Catalonia, Spain.
| |
Collapse
|
5
|
Islas R, Oyarzún DP, Cantero-López P. Analysis of the aromaticity in extended systems formed from isoelectronic Al42− and C42+ aromatic clusters. Struct Chem 2018. [DOI: 10.1007/s11224-018-1120-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
6
|
Pham HT, Nguyen MT. Aromaticity of Some Metal Clusters: A Different View from Magnetic Ring Current. J Phys Chem A 2018; 122:1378-1391. [DOI: 10.1021/acs.jpca.7b11191] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Hung Tan Pham
- Computational
Chemistry Group, Ton Duc Thang University, Ho Chi Minh City, 70000 Vietnam
- Faculty
of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City, 70000 Vietnam
| | - Minh Tho Nguyen
- Computational
Chemistry Group, Ton Duc Thang University, Ho Chi Minh City, 70000 Vietnam
- Faculty
of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City, 70000 Vietnam
- Department
of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
| |
Collapse
|
7
|
Yañez O, Vásquez-Espinal A, Inostroza D, Ruiz L, Pino-Rios R, Tiznado W. A Fukui function-guided genetic algorithm. Assessment on structural prediction of Sin(n = 12-20) clusters. J Comput Chem 2017; 38:1668-1677. [DOI: 10.1002/jcc.24810] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2017] [Revised: 03/29/2017] [Accepted: 03/30/2017] [Indexed: 11/10/2022]
Affiliation(s)
- Osvaldo Yañez
- Doctorado en Fisicoquímica Molecular; Facultad de Ciencias Exactas, Universidad Andres Bello; República 275 Santiago Chile
- Departamento de Ciencias Químicas; Facultad de Ciencias Exactas Universidad Andres Bello; República 275 Santiago Chile
| | - Alejandro Vásquez-Espinal
- Doctorado en Fisicoquímica Molecular; Facultad de Ciencias Exactas, Universidad Andres Bello; República 275 Santiago Chile
- Departamento de Ciencias Químicas; Facultad de Ciencias Exactas Universidad Andres Bello; República 275 Santiago Chile
| | - Diego Inostroza
- Centro de Bioinformatica y Simulación Molecular; Facultad de Ingeniería, Universidad de Talca; 2 Norte 685, Casilla 721 Talca Chile
| | - Lina Ruiz
- Centro de Investigación Biomédica, Universidad Autónoma de Chile; Santiago Chile
| | - Ricardo Pino-Rios
- Doctorado en Fisicoquímica Molecular; Facultad de Ciencias Exactas, Universidad Andres Bello; República 275 Santiago Chile
- Departamento de Ciencias Químicas; Facultad de Ciencias Exactas Universidad Andres Bello; República 275 Santiago Chile
| | - William Tiznado
- Doctorado en Fisicoquímica Molecular; Facultad de Ciencias Exactas, Universidad Andres Bello; República 275 Santiago Chile
- Departamento de Ciencias Químicas; Facultad de Ciencias Exactas Universidad Andres Bello; República 275 Santiago Chile
| |
Collapse
|
8
|
Vásquez-Espinal A, Poater J, Solà M, Tiznado W, Islas R. Testing the effectiveness of the isoelectronic substitution principle through the transformation of aromatic osmathiophene derivatives into their inorganic analogues. NEW J CHEM 2017. [DOI: 10.1039/c6nj02972h] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The isoelectronic substitution principle has been employed in the [OsCl2(SC3H3)(PH3)2]+ complex, generating a new set of complexes, where C has been replaced by B− and/or N+.
Collapse
Affiliation(s)
- Alejandro Vásquez-Espinal
- Doctorado en Fisicoquímica Molecular
- Facultad de Ciencias Exactas
- Universidad Andres Bello
- Santiago
- Chile
| | - Jordi Poater
- Departament de Química Inorgànica i Orgànica & Institut de Química Teòrica i Computacional (IQTCUB)
- Universitat de Barcelona
- Catalonia
- Spain
- ICREA
| | - Miquel Solà
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química
- Universitat de Girona
- Catalonia
- Spain
| | - William Tiznado
- Departamento de Ciencias Químicas
- Facultad de Ciencias Exactas
- Universidad Andres Bello
- Santiago
- Chile
| | - Rafael Islas
- Departamento de Ciencias Químicas
- Facultad de Ciencias Exactas
- Universidad Andres Bello
- Santiago
- Chile
| |
Collapse
|
9
|
Pham HT, Ngo LQ, Pham-Ho MP, Nguyen MT. Theoretical Study of Small Scandium-Doped Silver Clusters ScAgn with n = 1–7: σ-Aromatic Feature. J Phys Chem A 2016; 120:7964-7972. [DOI: 10.1021/acs.jpca.6b08080] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Hung Tan Pham
- Institute for Computational Science and Technology (ICST), Ho Chi Minh City, Vietnam
| | - Loc Quang Ngo
- Institute for Computational Science and Technology (ICST), Ho Chi Minh City, Vietnam
| | - My Phuong Pham-Ho
- Institute for Computational Science and Technology (ICST), Ho Chi Minh City, Vietnam
| | - Minh Tho Nguyen
- Department
of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
| |
Collapse
|
10
|
El Bakouri O, Solà M, Poater J. Planar vs. three-dimensional X62−, X2Y42−, and X3Y32− (X, Y = B, Al, Ga) metal clusters: an analysis of their relative energies through the turn-upside-down approach. Phys Chem Chem Phys 2016; 18:21102-10. [DOI: 10.1039/c6cp01109h] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Despite the fact that B and Al belong to the same group 13 elements, the B62− cluster prefers the planar D2h geometry, whereas Al62− favours the Oh structure, which is caused by orbital interactions.
Collapse
Affiliation(s)
- Ouissam El Bakouri
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química
- Universitat de Girona
- 17071 Girona
- Spain
| | - Miquel Solà
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química
- Universitat de Girona
- 17071 Girona
- Spain
| | - Jordi Poater
- Departament de Química Inorgànica i Orgànica & Institut de Química Teòrica i Computacional (IQTCUB)
- Universitat de Barcelona
- 08028 Barcelona
- Spain
- Department of Theoretical Chemistry and Amsterdam Center for Multiscale Modeling
| |
Collapse
|
11
|
Feixas F, Matito E, Poater J, Solà M. Quantifying aromaticity with electron delocalisation measures. Chem Soc Rev 2015; 44:6434-51. [PMID: 25858673 DOI: 10.1039/c5cs00066a] [Citation(s) in RCA: 299] [Impact Index Per Article: 29.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Aromaticity cannot be measured directly by any physical or chemical experiment because it is not a well-defined magnitude. Its quantification is done indirectly from the measure of different properties that are usually found in aromatic compounds such as bond length equalisation, energetic stabilisation, and particular magnetic behaviour associated with induced ring currents. These properties have been used to set up the myriad of structural-, energetic-, and magnetic-based indices of aromaticity known to date. The cyclic delocalisation of mobile electrons in two or three dimensions is probably one of the key aspects that characterise aromatic compounds. However, it has not been until the last decade that electron delocalisation measures have been widely employed to quantify aromaticity. Some of these new indicators of aromaticity such as the PDI, FLU, ING, and INB were defined in our group. In this paper, we review the different existing descriptors of aromaticity that are based on electron delocalisation properties, we compare their performance with indices based on other properties, and we summarise a number of applications of electronic-based indices for the analysis of aromaticity in interesting chemical problems.
Collapse
Affiliation(s)
- Ferran Feixas
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, 17071 Girona, Spain.
| | | | | | | |
Collapse
|
12
|
Díaz-Cervantes E, Poater J, Robles J, Swart M, Solà M. Unraveling the Origin of the Relative Stabilities of Group 14 M2N22+ (M, N = C, Si, Ge, Sn, and Pb) Isomer Clusters. J Phys Chem A 2013; 117:10462-9. [DOI: 10.1021/jp406071d] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Erik Díaz-Cervantes
- Departamento
de Farmacia, Universidad de Guanajuato, Noria Alta s/n, Gto. 36050 Guanajuato, México
| | - Jordi Poater
- Institut de Química
Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, 17071 Girona, Catalonia, Spain
| | - Juvencio Robles
- Departamento
de Farmacia, Universidad de Guanajuato, Noria Alta s/n, Gto. 36050 Guanajuato, México
| | - Marcel Swart
- Institut de Química
Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, 17071 Girona, Catalonia, Spain
- Institució
Catalana de Recerca i Estudis Avançats (ICREA), Pg. Lluís Companys 23, 08010 Barcelona, Catalonia, Spain
| | - Miquel Solà
- Institut de Química
Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, 17071 Girona, Catalonia, Spain
| |
Collapse
|
13
|
El-Hamdi M, El Bakouri El Farri O, Salvador P, Abdelouahid BA, El Begrani MS, Poater J, Solà M. Analysis of the Relative Stabilities of Ortho, Meta, and Para MClY(XC4H4)(PH3)2 Heterometallabenzenes (M = Rh, Ir; X = N, P; Y = Cl and M = Ru, Os; X = N, P; Y = CO). Organometallics 2013. [DOI: 10.1021/om400629w] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Majid El-Hamdi
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, E-17071 Girona, Catalonia, Spain
- Département
de Chimie, Faculté des Sciences, Université Abdelmalek Essaâdi, M’Hannech II B.P.2121, C.P. 93002 Tétouan, Morocco
| | - Ouissam El Bakouri El Farri
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, E-17071 Girona, Catalonia, Spain
| | - Pedro Salvador
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, E-17071 Girona, Catalonia, Spain
| | - Ben Ali Abdelouahid
- Département
de Chimie, Faculté des Sciences, Université Abdelmalek Essaâdi, M’Hannech II B.P.2121, C.P. 93002 Tétouan, Morocco
| | - Mohamed Soussi El Begrani
- Département
de Chimie, Faculté des Sciences, Université Abdelmalek Essaâdi, M’Hannech II B.P.2121, C.P. 93002 Tétouan, Morocco
| | - Jordi Poater
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, E-17071 Girona, Catalonia, Spain
| | - Miquel Solà
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, E-17071 Girona, Catalonia, Spain
| |
Collapse
|
14
|
Poater J, Solà M, Viñas C, Teixidor F. A Simple Link between Hydrocarbon and Borohydride Chemistries. Chemistry 2013; 19:4169-75. [DOI: 10.1002/chem.201204397] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2012] [Indexed: 11/06/2022]
|