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España Amórtegui JC, Pekar H, Retrato MDC, Persson M, Karlson B, Bergquist J, Zuberovic-Muratovic A. LC-MS/MS Analysis of Cyanotoxins in Bivalve Mollusks-Method Development, Validation and First Evidence of Occurrence of Nodularin in Mussels ( Mytilus edulis) and Oysters ( Magallana gigas) from the West Coast of Sweden. Toxins (Basel) 2023; 15:toxins15050329. [PMID: 37235362 DOI: 10.3390/toxins15050329] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 05/09/2023] [Accepted: 05/09/2023] [Indexed: 05/28/2023] Open
Abstract
In this paper, an LC-MS/MS method for the simultaneous identification and quantification of cyanotoxins with hydrophilic and lipophilic properties in edible bivalves is presented. The method includes 17 cyanotoxins comprising 13 microcystins (MCs), nodularin (NOD), anatoxin-a (ATX-a), homoanatoxin (h-ATX) and cylindrospermopsin (CYN). A benefit to the presented method is the possibility for the MS detection of MC-LR-[Dha7] and MC-LR-[Asp3] as separately identified and MS-resolved MRM signals, two congeners which were earlier detected together. The performance of the method was evaluated by in-house validation using spiked mussel samples in the quantification range of 3.12-200 µg/kg. The method was found to be linear over the full calibration range for all included cyanotoxins except CYN for which a quadratic regression was used. The method showed limitations for MC-LF (R2 = 0.94), MC-LA (R2 ≤ 0.98) and MC-LW (R2 ≤ 0.98). The recoveries for ATX-a, h-ATX, CYN, NOD, MC-LF and MC-LW were lower than desired (<70%), but stable. Despite the given limitations, the validation results showed that the method was specific and robust for the investigated parameters. The results demonstrate the suitability of the method to be applied as a reliable monitoring tool for the presented group of cyanotoxins, as well as highlight the compromises that need to be included if multi-toxin methods are to be used for the analysis of cyanotoxins with a broader range of chemical properties. Furthermore, the method was used to analyze 13 samples of mussels (Mytilus edulis) and oysters (Magallana gigas) collected in the 2020-2022 summers along the coast of Bohuslän (Sweden). A complementary qualitative analysis for the presence of cyanotoxins in phytoplankton samples collected from marine waters around southern Sweden was performed with the method. Nodularin was identified in all samples and quantified in bivalve samples in the range of 7-397 µg/kg. Toxins produced by cyanobacteria are not included in the European Union regulatory monitoring of bivalves; thus, the results presented in this study can be useful in providing the basis for future work including cyanotoxins within the frame of regulatory monitoring to increase seafood safety.
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Affiliation(s)
- Julio César España Amórtegui
- Science Department, Swedish Food Agency, Box 622, SE-751 26 Uppsala, Sweden
- Chemistry Department, Science Faculty, Universidad Nacional de Colombia, Cr. 45 N° 26-85, Bogotá P.O. Box 111321, Colombia
| | - Heidi Pekar
- Science Department, Swedish Food Agency, Box 622, SE-751 26 Uppsala, Sweden
- Stockholm Water and Waste Company, Bryggerivägen 10, SE-106 36 Stockholm, Sweden
| | - Mark Dennis Chico Retrato
- Department of Chemistry, Biomedical Center, Analytical Chemistry and Neurochemistry, Uppsala University, Box 599, SE-751 24 Uppsala, Sweden
| | - Malin Persson
- Science Department, Swedish Food Agency, Box 622, SE-751 26 Uppsala, Sweden
| | - Bengt Karlson
- Research and Development, Oceanography, Swedish Meteorological and Hydrological Institute, Sven Källfelts Gata 15, SE-426 71 Västra Frölunda, Sweden
| | - Jonas Bergquist
- Department of Chemistry, Biomedical Center, Analytical Chemistry and Neurochemistry, Uppsala University, Box 599, SE-751 24 Uppsala, Sweden
| | - Aida Zuberovic-Muratovic
- Science Department, Swedish Food Agency, Box 622, SE-751 26 Uppsala, Sweden
- Department of Chemistry, Biomedical Center, Analytical Chemistry and Neurochemistry, Uppsala University, Box 599, SE-751 24 Uppsala, Sweden
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Iida H, Aburai N, Fujii K. Microalga-bacteria Community with High Level Carbon Dioxide Acclimation and Nitrogen-fixing Ability. Protist 2023; 174:125957. [PMID: 37105051 DOI: 10.1016/j.protis.2023.125957] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Revised: 03/27/2023] [Accepted: 04/05/2023] [Indexed: 04/29/2023]
Abstract
Microalgal conversion of high-level CO2 in industrial flue gas to value-added products is attractive technology for mitigating global warming. However, reduction of microalgal production costs for medium ingredients, particularly nitrogen salts, is essential. The use of atmospheric nitrogen as a nitrogen source for microalgal cultivation will dramatically reduce its production costs. We attempted to enrich a microalga-bacteria community, which fixes both CO2 and atmospheric nitrogen under high level CO2. By cultivating biofilm recovered from the surface of cobbles in a riverbank, a microalgal flora which grows in a nitrogen salts-free medium under 10% CO2 was enriched, and the coccoid microalgal strain MP5 was isolated from it. Phylogenetic analysis revealed that the strain MP5 belongs to the genus Coelastrella, and the closest known species was C. terrestris. With PCR-DGGE analysis, it was found that the enriched microalgal community includes bacteria, some of which are suggested diazotrophs. The addition of bactericides in culture medium inhibited MP5 growth, even though the strain MP5 is eukaryotic. Growth of bacteria-free MP5 was stimulated by addition of Agrobacterium sp. isolates in nitrogen salts-free medium, suggesting that MP5 and the bacteria have responsibility for photosynthetic carbon fixation and nitrogen fixation, respectively.
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Affiliation(s)
- Haruki Iida
- Department of Chemistry and Life Science, Graduate School of Engineering, Kogakuin University, 2665-1 Nakano-cho, Hachioji city, Tokyo 1920015, Japan
| | - Nobuhiro Aburai
- Department of Chemistry and Life Science, Graduate School of Engineering, Kogakuin University, 2665-1 Nakano-cho, Hachioji city, Tokyo 1920015, Japan
| | - Katsuhiko Fujii
- Department of Chemistry and Life Science, Graduate School of Engineering, Kogakuin University, 2665-1 Nakano-cho, Hachioji city, Tokyo 1920015, Japan.
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Holderman NR, Ferrer-González FX, Glushka J, Moran MA, Edison AS. Dissolved organic metabolite extraction from high-salt media. NMR IN BIOMEDICINE 2023; 36:e4797. [PMID: 35799308 DOI: 10.1002/nbm.4797] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Revised: 06/13/2022] [Accepted: 07/01/2022] [Indexed: 06/15/2023]
Abstract
We describe considerations and strategies for developing a nuclear magnetic resonance (NMR) sample preparation method to extract low molecular weight metabolites from high-salt spent media in a model coculture system of phytoplankton and marine bacteria. Phytoplankton perform half the carbon fixation and oxygen generation on Earth. A substantial fraction of fixed carbon becomes part of a metabolite pool of small molecules known as dissolved organic matter (DOM), which are taken up by marine bacteria proximate to phytoplankton. There is an urgent need to elucidate these metabolic exchanges due to widespread anthropogenic transformations on the chemical, phenotypic, and species composition of seawater. These changes are increasing water temperature and the amount of CO2 absorbed by the ocean at energetic costs to marine microorganisms. Little is known about the metabolite-mediated, structured interactions occurring between phytoplankton and associated marine bacteria, in part because of challenges in studying high-salt solutions on various analytical platforms. NMR analysis is problematic due to the high-salt content of both natural seawater and culture media for marine microbes. High-salt concentration degrades the performance of the radio frequency coil, reduces the efficiency of some pulse sequences, limits signal-to-noise, and prolongs experimental time. The method described herein can reproducibly extract low molecular weight DOM from small-volume, high-salt cultures. It is a promising tool for elucidating metabolic flux between marine microorganisms and facilitates genetic screens of mutant microorganisms.
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Affiliation(s)
- Nicole R Holderman
- Department of Biochemistry and Molecular Biology and Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA
| | | | - John Glushka
- Department of Biochemistry and Molecular Biology and Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA
| | - Mary Ann Moran
- Department of Marine Sciences, University of Georgia, Athens, Georgia, USA
| | - Arthur S Edison
- Department of Biochemistry and Molecular Biology and Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA
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4
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Lobus NV, Kulikovskiy MS. The Co-Evolution Aspects of the Biogeochemical Role of Phytoplankton in Aquatic Ecosystems: A Review. BIOLOGY 2023; 12:biology12010092. [PMID: 36671784 PMCID: PMC9855382 DOI: 10.3390/biology12010092] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 12/12/2022] [Accepted: 01/03/2023] [Indexed: 01/11/2023]
Abstract
In freshwater and marine ecosystems, the phytoplankton community is based on microalgae and cyanobacteria, which include phylogenetically very diverse groups of oxygenic photoautotrophs. In the process of evolution, they developed a wide range of bio(geo)chemical adaptations that allow them to effectively use solar radiation, CO2, and nutrients, as well as major and trace elements, to form O2 and organic compounds with a high chemical bond energy. The inclusion of chemical elements in the key processes of energy and plastic metabolism in the cell is determined by redox conditions and the abundance and metabolic availability of elements in the paleoenvironment. Geochemical evolution, which proceeded simultaneously with the evolution of biosystems, contributed to an increase in the number of metals and trace elements acting as cofactors of enzymes involved in metabolism and maintaining homeostasis in the first photoautotrophs. The diversity of metal-containing enzymes and the adaptive ability to replace one element with another without losing the functional properties of enzymes ensured the high ecological plasticity of species and allowed microalgae and cyanobacteria to successfully colonize a wide variety of habitats. In this review, we consider the main aspects of the modern concepts of the biogeochemical evolution of aquatic ecosystems and the role of some metals in the main bioenergetic processes in photosynthetic prokaryotes and eukaryotes. We present generalized data on the efficiency of the assimilation of key nutrients by phytoplankton and their importance in the cycle of carbon, silicon, nitrogen, phosphorus, sulfur, and iron. This article presents modern views on the evolutionary prerequisites for the formation of elemental signatures in different systematic groups of microalgae, as well as the possibility of using the stoichiometric ratio in the study of biological and geochemical processes in aquatic ecosystems.
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Padua S, Kripa V, Prema D, Mohamed KS, Jeyabaskaran R, Kaladharan P, Ratheesh L, Jenny B, Shylaja G, Joseph RV, Shyamala MP, Vysakhan P, John S, Babu A. Assessment of ecosystem health of a micro-level Ramsar coastal zone in the Vembanad Lake, Kerala, India. ENVIRONMENTAL MONITORING AND ASSESSMENT 2022; 195:95. [PMID: 36355338 PMCID: PMC9648893 DOI: 10.1007/s10661-022-10692-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/16/2021] [Accepted: 10/19/2022] [Indexed: 06/16/2023]
Abstract
Health of an ecosystem is very much important as we depend on its goods and services for our existence. Because of this, we need to continuously monitor its health for human benefit and for identifying areas for improvement of our natural systems. The present study tries to assess the condition of a coastal ecosystem within the Vembanad Lake, Kerala, India, using key water quality parameters at micro-level. Principal component analysis identified the minimum required water quality dataset for further analysis and was scored using linear scoring functions. The weighted additive method was used to integrate the individual scores to arrive at a final score representing the ecosystem health. Spline interpolation was applied to develop the ecosystem health map of the study area. Using this method, 35.8% area of the aquatic ecosystem studied was characterized as good, 32.2% as moderate, 26.2% as fair and 5.8% as poor. The assessment results can help the policymakers/managers to make appropriate decisions for the better management of the coastal ecosystems studied. Moreover, this methodology can be replicated for the assessment of coastal regions with similar ecosystem characteristics.
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Affiliation(s)
- Shelton Padua
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India.
| | - V Kripa
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
- Coastal Aquaculture Authority, Integrated Office Complex for Animal Husbandry and Fisheries Department, Government of India, Tamil Nadu, Chennai, 600 035, India
| | - D Prema
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - K S Mohamed
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
- Sustainable Seafood Network of India (SSNI), Thiruvananthapuram, 695001, Kerala, India
| | - R Jeyabaskaran
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - P Kaladharan
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - Lavanya Ratheesh
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - B Jenny
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - G Shylaja
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - Reena V Joseph
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - M P Shyamala
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - P Vysakhan
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - Seban John
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
| | - Akhil Babu
- ICAR - Central Marine Fisheries Research Institute, PO Box 1603, Kochi, 682018, Kerala, India
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Netshituni VT, Cuthbert RN, Dondofema F, Dalu T. Effects of wildfire ash from native and alien plants on phytoplankton biomass. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 834:155265. [PMID: 35439519 DOI: 10.1016/j.scitotenv.2022.155265] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Revised: 04/09/2022] [Accepted: 04/10/2022] [Indexed: 06/14/2023]
Abstract
Wildfires are natural or anthropogenic phenomena increasing at alarming rates globally due to land-use alterations, droughts, climatic warming, hunting and biological invasions. Whereas wildfire effects on terrestrial ecosystems are marked and relatively well-studied, ash depositions into aquatic ecosystems have often remained overlooked, but have the potential to significantly impact bottom-up processes. This study assessed ash-water-phytoplankton biomass dynamics using six plant species [i.e., three natives (apple leaf Philenoptera violacea, Transvaal milk plum Englerophytum magalismontanum, quinine tree Rauvolfia caffra) and three aliens (lantana Lantana camara, gum Eucalyptus camaldulensis, guava Psidium guajava)] based on a six-week mesocosm experiment with different ash concentrations (1 and 2 g L-1). We assessed concentrations of chemical elements, i.e., N, P, K, Ca, Mg, Na, Mn, Fe, Cu, Zn and B from ash collected, and examined potential differences among the species. High concentrations of P, K, Mn, Fe, Cu, Zn and B were recorded from Transvaal milk plum ash and low concentrations of P, K, Ca, Mg, Cu and Zn were recorded from apple leaf. An increase in phytoplankton biomass (using chlorophyll-a concentration as a proxy) for all treatments i.e., 1 and 2 g L-1 and plant species was observed one week after, followed by decreases in the following weeks, with the exception of 2 g L-1 for lantana, gum and control groups. Silicate concentrations (i.e., used as a proxy for diatom abundance) showed increasing patterns among all ash treatments, with the exception of controls. However, no clear patterns were observed between native and alien plant ash for both chl-a and silicate concentrations. We found that ash has notable effects on water chemistry, particularly nitrate, which increased throughout the weeks, whereas, pH and conductivity were high at low ash concentrations. The impacts of ash on water chemistry, chl-a and silicate concentrations vary with individual species and the amount of ash deposited into the system.
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Affiliation(s)
- Vincent T Netshituni
- Aquatic Systems Research Group, Department of Geography and Environmental Sciences, University of Venda, Thohoyandou 0950, South Africa
| | - Ross N Cuthbert
- School of Biological Sciences, Queen's University Belfast, Belfast BT9 5DL, United Kingdom; South African Institute for Aquatic Biodiversity, Makhanda 6140, South Africa
| | - Farai Dondofema
- Aquatic Systems Research Group, Department of Geography and Environmental Sciences, University of Venda, Thohoyandou 0950, South Africa
| | - Tatenda Dalu
- South African Institute for Aquatic Biodiversity, Makhanda 6140, South Africa; Aquatic Systems Research Group, School of Biology and Environmental Sciences, University of Mpumalanga, Nelspruit 1200, South Africa; Wissenschaftskolleg zu Berlin - Institute for Advanced Study, Wallotstraße 19, Berlin 14193, Germany.
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7
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Hintz NH, Schulze B, Wacker A, Striebel M. Ecological impacts of photosynthetic light harvesting in changing aquatic environments: A systematic literature map. Ecol Evol 2022; 12:e8753. [PMID: 35356568 PMCID: PMC8939368 DOI: 10.1002/ece3.8753] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Revised: 03/01/2022] [Accepted: 03/03/2022] [Indexed: 01/07/2023] Open
Abstract
Underwater light is spatially as well as temporally variable and directly affects phytoplankton growth and competition. Here we systematically (following the guidelines of PRISMA‐EcoEvo) searched and screened the published literature resulting in 640 individual articles. We mapped the conducted research for the objectives of (1) phytoplankton fundamental responses to light, (2) effects of light on the competition between phytoplankton species, and (3) effects of climate‐change‐induced changes in the light availability in aquatic ecosystems. Among the fundamental responses of phytoplankton to light, the effects of light intensity (quantity, as measure of total photon or energy flux) were investigated in most identified studies. The effects of the light spectrum (quality) that via species‐specific light absorbance result in direct consequences on species competition emerged more recently. Complexity in competition arises due to variability and fluctuations in light which effects are sparsely investigated on community level. Predictions regarding future climate change scenarios included changes in in stratification and mixing, lake and coastal ocean darkening, UV radiation, ice melting as well as light pollution which affect the underwater light‐climate. Generalization of consequences is difficult due to a high variability, interactions of consequences as well as a lack in sustained timeseries and holistic approaches. Nevertheless, our systematic literature map, and the identified articles within, provide a comprehensive overview and shall guide prospective research.
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Affiliation(s)
- Nils Hendrik Hintz
- Institute for Chemistry and Biology of the Marine Environment (ICBM) Carl von Ossietzky University of Oldenburg Wilhelmshaven Germany
| | - Brian Schulze
- Zoological Institute and Museum University of Greifswald Greifswald Germany
| | - Alexander Wacker
- Zoological Institute and Museum University of Greifswald Greifswald Germany
| | - Maren Striebel
- Institute for Chemistry and Biology of the Marine Environment (ICBM) Carl von Ossietzky University of Oldenburg Wilhelmshaven Germany
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Casabianca S, Bellingeri A, Capellacci S, Sbrana A, Russo T, Corsi I, Penna A. Ecological implications beyond the ecotoxicity of plastic debris on marine phytoplankton assemblage structure and functioning. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 290:118101. [PMID: 34523510 DOI: 10.1016/j.envpol.2021.118101] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Revised: 08/20/2021] [Accepted: 09/01/2021] [Indexed: 06/13/2023]
Abstract
Plastic pollution is a global issue posing a threat to marine biota with ecological implications on ecosystem functioning. Micro and nanoplastic impact on phytoplankton autotrophic species (e.g., cell growth inhibition, decrease in chlorophyll a and photosynthetic efficiency and hetero-aggregates formation) have been largely documented. However, the heterogeneity of data makes rather difficult a comparison based on size (i.e. micro vs nano). In addition, knowledge gaps on the ecological impact on phytoplankton assemblage structure and functioning are evident. A new virtual meta-analysis on cause-effect relationships of micro and nanoplastics on phytoplankton species revealed the significant effect posed by polymer type on reducing cell density for tested PVC, PS and PE plastics. Linked with autotrophic phytoplankton role in atmospheric CO2 fixation, a potential impact of plastics on marine carbon pump is discussed. The understanding of the effects of microplastics and nanoplastics on the phytoplankton functioning is fundamental to raise awareness on the overall impact on the first level of marine food web. Interactions between micro and nanoplastics and phytoplankton assemblages have been quite documented by in vitro examinations; but, further studies considering natural plankton assemblages and/or large mesocosm experiments should be performed to evaluate and try predicting ecological impacts on primary producers.
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Affiliation(s)
- Silvia Casabianca
- Department of Biomolecular Sciences, University of Urbino, Campus E. Mattei, 61121, Urbino, Italy; CoNISMa, National Inter-University Consortium for Marine Sciences, 00196, Rome, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032, Fano, Italy.
| | - Arianna Bellingeri
- Department of Physical, Earth and Environmental Sciences, University of Siena, 53100, Siena, Italy
| | - Samuela Capellacci
- Department of Biomolecular Sciences, University of Urbino, Campus E. Mattei, 61121, Urbino, Italy; CoNISMa, National Inter-University Consortium for Marine Sciences, 00196, Rome, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032, Fano, Italy
| | - Alice Sbrana
- Department of Biology, University of Rome Tor Vergata, 00133, Rome, Italy; PhD Program in Evolutionary Biology and Ecology, Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica snc, 00133, Roma, Italy
| | - Tommaso Russo
- CoNISMa, National Inter-University Consortium for Marine Sciences, 00196, Rome, Italy; Department of Biology, University of Rome Tor Vergata, 00133, Rome, Italy
| | - Ilaria Corsi
- CoNISMa, National Inter-University Consortium for Marine Sciences, 00196, Rome, Italy; Department of Physical, Earth and Environmental Sciences, University of Siena, 53100, Siena, Italy
| | - Antonella Penna
- Department of Biomolecular Sciences, University of Urbino, Campus E. Mattei, 61121, Urbino, Italy; CoNISMa, National Inter-University Consortium for Marine Sciences, 00196, Rome, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032, Fano, Italy
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Adyasari D, Pratama MA, Teguh NA, Sabdaningsih A, Kusumaningtyas MA, Dimova N. Anthropogenic impact on Indonesian coastal water and ecosystems: Current status and future opportunities. MARINE POLLUTION BULLETIN 2021; 171:112689. [PMID: 34256325 DOI: 10.1016/j.marpolbul.2021.112689] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2021] [Revised: 06/22/2021] [Accepted: 06/29/2021] [Indexed: 06/13/2023]
Abstract
Indonesia, the world's largest archipelagic country and the fourth most populated nation, has struggled with coastal water pollution in the last decades. With the increasing population in coastal urban cities, more land-based pollutants are transported to the coastal water and adversely affected the tropical ecosystems. This paper provides an overview of anthropogenic pollutant studies in Indonesian coastal water and ecosystems from 1986 to 2021. Nutrients, heavy metals, organic pollutants, and plastic debris are the most-studied contaminants. We found that 82%, 54% and 50% of the studies exceeding nutrients, heavy metals, and organic pollutants standard limit, respectively; thus, indicating poor water quality status in part of Indonesian coastal water. The coral reef ecosystems is found to be the most sensitive to anthropogenic disturbance. The potential effect of climate change, new coastal pollution hotspots in eastern Indonesia, marine anthropogenic sources, legacy/emerging pollutants, and the need for research related to the biological contamination, are discussed for future opportunities.
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Affiliation(s)
- Dini Adyasari
- Department of Geological Sciences, University of Alabama, Tuscaloosa 35487, USA.
| | | | - Novi Andriany Teguh
- Department of Civil Engineering, Sepuluh Nopember Institute of Technology, Surabaya 60111, Indonesia
| | - Aninditia Sabdaningsih
- Department of Aquatic Resources, Faculty of Fisheries and Marine Sciences, Diponegoro University, Semarang 50275, Indonesia; Tropical Marine Biotechnology Laboratory, Faculty of Fisheries and Marine Sciences, Diponegoro University, Semarang 50275, Indonesia
| | | | - Natasha Dimova
- Department of Geological Sciences, University of Alabama, Tuscaloosa 35487, USA
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Melaram R. Environmental Risk Factors Implicated in Liver Disease: A Mini-Review. Front Public Health 2021; 9:683719. [PMID: 34249849 PMCID: PMC8264448 DOI: 10.3389/fpubh.2021.683719] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2021] [Accepted: 05/17/2021] [Indexed: 01/08/2023] Open
Abstract
Liver disease is a global health issue, resulting in about two million deaths per year. It encompasses a wide spectrum of varied or unknown etiologies, ranging from lifestyle choices to pre-existing comorbidities. In recent decades, exposure to environmental toxins and subsequent liver health outcomes have captured public interest, due to the extensive application of pesticides, consumption of aflatoxin contaminated foodstuff, and cyanobacterial harmful algae blooms in endemic regions of liver disease. Hepatocellular carcinoma is a serious and debilitating condition of the liver, characterized by abdominal pain and unexplained weight loss. Established risk factors for hepatocellular carcinoma include alcohol consumption, cigarette smoking, and viral infections of hepatitis B and C. However, mounting evidence suggests that environmental toxins may represent an important contributing factor in hepatocellular carcinoma development. This mini-review synthesizes epidemiological investigations, providing evidence for environmental toxins as one potential risk factor for liver disease.
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Affiliation(s)
- Rajesh Melaram
- School of Health Sciences, Walden University, Minneapolis, MN, United States
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11
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Gonabadi E, Samadlouie HR, Shafafi Zenoozian M. Optimization of culture conditions for enhanced Dunaliella salina productions in mixotrophic culture. Prep Biochem Biotechnol 2021; 52:154-162. [PMID: 34057884 DOI: 10.1080/10826068.2021.1922917] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Abstract
Dunaliella salina (D. salina) is a green microalga known for its tendency to produce lipid and β-carotene. Fatty acid profile, lipid and β-carotene productions of the microalga D. salina cultivated under different mixotrophic conditions were assayed. Notably, in spite of a broad spectrum of substrates served, mixotrophic cultivations slightly affected the fatty acid composition, and as a result C16:0 and C18:0, C18:1, C18:2 and C18:3 were identified as main fatty acids. Lipid in dry weight biomass (DWB) hit a high of 24.3% at 5% of NaCL and linolenic acid in lipid reached a peak of 9.15% at 15% of NaCL in medium containing glucose and equal amounts of yeast extract and soy bean powder. One-factor-at-a-time was applied to elucidate the substrates which had noticeable impacts on β-carotene production. Glucose, meat peptone, titanium dioxide nanoparticles (TiO2 NPs), pH 7.5 and 5% NaCL were identified as key process parameters impacting β-carotene production. Following, the concentration of glucose, meat peptone and TiO2 NPs were optimized by using response surface method. The highest content of β-carotene, 25.23 mg/g DWB, was obtained in medium composed of (g/L); 22.92 glucose, 5 meat peptone and 0.002 TiO2 NPs.
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Affiliation(s)
- Ebrahim Gonabadi
- Department of Food Science and Technology, Islamic Azad University, Sabzevar Branch, Sabzevar, Iran
| | - Hamid Reza Samadlouie
- Department of Food Science and Technology, Faculty of Agriculture, Shahrood University of Technology, Shahrood, Iran
| | - Masoud Shafafi Zenoozian
- Department of Food Science and Technology, Islamic Azad University, Sabzevar Branch, Sabzevar, Iran
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Zhang F, He J, Jin H, Hao Q, Gao Z, Sun H. Comparison of picoeukaryote community structures and their environmental relationships between summer and autumn in the southern Chukchi Sea. Extremophiles 2021; 25:235-248. [PMID: 33938982 DOI: 10.1007/s00792-021-01222-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2020] [Accepted: 07/13/2020] [Indexed: 11/30/2022]
Abstract
Picoeukaryotes constitute an important component of the living biomass of oceanic communities and play major roles in biogeochemical cycles. There are very few studies on picoeukaryotes found in the Chukchi Sea. This work shows the relationship between community distribution and composition of picoeukaryotes residing in water masses and physicochemical factors in the southern Chukchi Sea studied in both midsummer (July) and early autumn (September), 2012. Illumina 18S V4 rDNA metabarcoding were used as the main tool. In July, Mamiellophyceae, Dinophyceae, and Trebouxiophyceae were the main microbial classes, with Micromonas, Prasinoderma, Telonema, Amoebophrya, Bathycoccus, Picomonas, and Bolidomonas representing the main genera. In September, Trebouxiophyceae surpassed Dinophyceae and was the second main microbial class, with Micromonas, Prasinoderma, Bathycoccus, Bolidomonas, Telonema, Choricystis, and Diaphanoeca representing the main genera. Water mass was the primary factor determining the community composition and diversity of picoeukaryotes. Abundance of Bathycoccus was found to be highly correlated with Alaskan Coastal Water and that of Prasinoderma, Bolidomonas, and Diaphanoeca with Bering Seawater. Nitrate and phosphate content of water in midsummer and dissolved oxygen (DO) and temperature in early autumn were the main factors that shaped the abundance of the picoeukaryote community.
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Affiliation(s)
- Fang Zhang
- The Key Laboratory for Polar Science MNR, Shanghai, China
| | - Jianfeng He
- The Key Laboratory for Polar Science MNR, Shanghai, China.
| | - Haiyan Jin
- Laboratory of Marine Ecosystem and Biogeochemistry, Second Institute of Oceanography, MNR, Hangzhou, 310012, China
| | - Qiang Hao
- Laboratory of Marine Ecosystem and Biogeochemistry, Second Institute of Oceanography, MNR, Hangzhou, 310012, China
| | - Zhongyong Gao
- Key Laboratory of Global Change and Marine-Atmospheric Chemistry, Third Institute of Oceanography, MNR, Xiamen, 361005, China
| | - Heng Sun
- Key Laboratory of Global Change and Marine-Atmospheric Chemistry, Third Institute of Oceanography, MNR, Xiamen, 361005, China
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Multiple interacting environmental drivers reduce the impact of solar UVR on primary productivity in Mediterranean lakes. Sci Rep 2020; 10:19812. [PMID: 33188224 PMCID: PMC7666193 DOI: 10.1038/s41598-020-76237-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Accepted: 10/23/2020] [Indexed: 11/25/2022] Open
Abstract
Increases in rainfall, continental runoff, and atmospheric dust deposition are reducing water transparency in lakes worldwide (i.e. higher attenuation Kd). Also, ongoing alterations in multiple environmental drivers due to global change are unpredictably impacting phytoplankton responses and lakes functioning. Although both issues demand urgent research, it remains untested how the interplay between Kd and multiple interacting drivers affect primary productivity (Pc). We manipulated four environmental drivers in an in situ experiment—quality of solar ultraviolet radiation (UVR), nutrient concentration (Nut), CO2 partial pressure (CO2), and light regime (Mix)—to determine how the Pc of nine freshwater phytoplankton communities, found along a Kd gradient in Mediterranean ecosystems, changed as the number of interacting drivers increased. Our findings indicated that UVR was the dominant driver, its effect being between 3–60 times stronger, on average, than that of any other driver tested. Also, UVR had the largest difference in driver magnitude of all the treatments tested. A future UVR × CO2 × Mix × Nut scenario exerted a more inhibitory effect on Pc as the water column became darker. However, the magnitude of this synergistic effect was 40–60% lower than that exerted by double and triple interactions and by UVR acting independently. These results illustrate that although future global-change conditions could reduce Pc in Mediterranean lakes, multiple interacting drivers can temper the impact of a severely detrimental driver (i.e. UVR), particularly as the water column darkens.
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Zhou J, Lao YM, Song JT, Jin H, Zhu JM, Cai ZH. Temporal heterogeneity of microbial communities and metabolic activities during a natural algal bloom. WATER RESEARCH 2020; 183:116020. [PMID: 32653764 DOI: 10.1016/j.watres.2020.116020] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Revised: 05/31/2020] [Accepted: 06/04/2020] [Indexed: 06/11/2023]
Abstract
Elucidating the interactions between algae and associated microbial communities is critical for understanding the mechanisms that mediate the dynamic of harmful algal blooms (HABs) in marine environment. However, the microbial functional profiles and their biogeochemical potential in HABs process remains elusive, especially during a complete natural HAB cycle. Here, we used pyrosequencing and functional gene array (GeoChip) to investigate microbial community dynamics and metabolic potential during a natural dinoflagellate (Noctiluca scintillans) bloom. The results shown that bacterioplankton exhibited significant temporal heterogeneity over the course of the bloom stages. Microbial succession was co-driven by environmental parameters and biotic interactions. The functional analysis revealed significant variations in microbial metabolism during matter cycling. At bloom onset-stage, metabolic potential associated with iron oxidation and transport was elevated. Carbon fixation and degradation, denitrification, phosphorus acquisition, and sulfur transfer/oxidation were significantly enhanced at the plateau stage. During the decline and terminal stages, oxidative stress, lysis of compounds, and toxin degradation & protease synthesis increased. This work reveal phycosphere microorganisms can enhanced organic C decomposition capacity, altered N assimilation rate and S/P turnover efficiency, and balancing of the Fe budget during HAB process. The ecological linkage analysis has further shown that microbial composition and functional potential were significantly linked to algal blooms occurrence. It suggest that structural variability and functional plasticity of microbial communities influence HAB trajectory.
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Affiliation(s)
- Jin Zhou
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, Shenzhen International Graduate School, Tsinghua University, Shenzhen, 518055, Guangdong Province, PR China
| | - Yong-Min Lao
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, Shenzhen International Graduate School, Tsinghua University, Shenzhen, 518055, Guangdong Province, PR China
| | - Jun-Ting Song
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, Shenzhen International Graduate School, Tsinghua University, Shenzhen, 518055, Guangdong Province, PR China
| | - Hui Jin
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, Shenzhen International Graduate School, Tsinghua University, Shenzhen, 518055, Guangdong Province, PR China
| | - Jian-Ming Zhu
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, Shenzhen International Graduate School, Tsinghua University, Shenzhen, 518055, Guangdong Province, PR China
| | - Zhong-Hua Cai
- Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, Shenzhen International Graduate School, Tsinghua University, Shenzhen, 518055, Guangdong Province, PR China.
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15
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Banchi E, Candotto Carniel F, Montagner A, Bosi S, Bramini M, Crosera M, León V, Martín C, Pallavicini A, Vázquez E, Prato M, Tretiach M. Graphene-based materials do not impair physiology, gene expression and growth dynamics of the aeroterrestrial microalga Trebouxia gelatinosa. Nanotoxicology 2019; 13:492-509. [PMID: 31241384 DOI: 10.1080/17435390.2019.1570371] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The effects of two graphene-based materials (GBMs), few-layers graphene (FLG) and graphene oxide (GO), were studied in the aeroterrestrial green microalga Trebouxia gelatinosa. Algae were subjected to short- and long-term exposure to GBMs at 0.01, 1 and 50 μg mL - 1. GBMs internalization after short-term exposures was investigated with confocal microscopy, Raman spectroscopy and TEM. Potential negative effects of GBMs, compared to the oxidative stress induced by H2O2, were verified by analyzing chlorophyl a fluorescence (ChlaF), expression of stress-related genes and membrane integrity. Effects of up to 4-week-long exposures were assessed analyzing growth dynamics, ChlaF and photosynthetic pigments. GBMs were not observed in cells but FLG was detected at the interface between the cell wall and plasma membrane, whereas GO was observed adherent to the external wall surface. FLG caused the down-regulation of the HSP70-1 gene, with the protein levels remaining stable, whereas GO had no effect. In comparison, H2O2 produced dose- and time-dependent effects on ChlaF, gene expression and HSP70 protein level. Long-term exposures to GBMs did not affect growth dynamics, ChlaF or photosynthetic pigment contents, indicating that the few observed short-term effects were not dangerous on the long-term. Results suggest that interactions between FLG and plasma membrane were harmless, activating a down-regulation of the HSP70-1 gene similar to that induced by H2O2. Our work shows that studying GBMs effects on non-model organisms is important since the results of model green microalgae are not representative of the whole taxonomic group.
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Affiliation(s)
- Elisa Banchi
- a Department of Life Sciences , University of Trieste , Trieste , Italy
| | | | - Alice Montagner
- a Department of Life Sciences , University of Trieste , Trieste , Italy
| | - Susanna Bosi
- b Department of Chemical and Pharmaceutical Sciences , University of Trieste , Trieste , Italy
| | - Mattia Bramini
- c Center for Synaptic Neuroscience and Technology , Italian Institute of Technology , Genova , Italy
| | - Matteo Crosera
- b Department of Chemical and Pharmaceutical Sciences , University of Trieste , Trieste , Italy
| | - Verónica León
- d Department of Organic Chemistry , Faculty of Chemical Science and Technology, University of Castilla-La Mancha , Ciudad Real , Spain.,e Regional Institute of Applied Scientific Investigation (IRICA) , University of Castilla-La Mancha , Ciudad Real , Spain
| | - Cristina Martín
- d Department of Organic Chemistry , Faculty of Chemical Science and Technology, University of Castilla-La Mancha , Ciudad Real , Spain.,e Regional Institute of Applied Scientific Investigation (IRICA) , University of Castilla-La Mancha , Ciudad Real , Spain
| | | | - Ester Vázquez
- d Department of Organic Chemistry , Faculty of Chemical Science and Technology, University of Castilla-La Mancha , Ciudad Real , Spain.,e Regional Institute of Applied Scientific Investigation (IRICA) , University of Castilla-La Mancha , Ciudad Real , Spain
| | - Maurizio Prato
- b Department of Chemical and Pharmaceutical Sciences , University of Trieste , Trieste , Italy.,f Carbon Nanobiotechnology Laboratory , CIC biomaGUNE , San Sebastian , Spain
| | - Mauro Tretiach
- a Department of Life Sciences , University of Trieste , Trieste , Italy
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16
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Qu P, Fu FX, Kling JD, Huh M, Wang X, Hutchins DA. Distinct Responses of the Nitrogen-Fixing Marine Cyanobacterium Trichodesmium to a Thermally Variable Environment as a Function of Phosphorus Availability. Front Microbiol 2019; 10:1282. [PMID: 31244804 PMCID: PMC6579863 DOI: 10.3389/fmicb.2019.01282] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2019] [Accepted: 05/23/2019] [Indexed: 12/05/2022] Open
Abstract
Surface temperature in the ocean is projected to be elevated and more variable in the future, which will interact with other environmental changes like reduced nutrient supplies. To explore these multiple stressor relationships, we tested the influence of thermal variation on the key marine diazotrophic cyanobacterium Trichodesmium erythraeum GBRTRLI101 as a function of the limiting nutrient phosphorus (P). Two constant temperature treatments represented current winter (22°C) and summer (30°C) mean values. Three variable temperature treatments fluctuated around the constant control values: Mean 22°C, either ± 2°C or ± 4°C; and mean 30°C ± 2°C. Each thermal treatment was grown under both P-replete (10 μmol/L) and P-limiting conditions (0.2 μmol/L). Effects of thermal variability on Trichodesmium were mainly found in the two winter variable temperature treatments (22°C ± 2°C or ± 4°C). P availability affected growth and physiology in all treatments and had significant interactions with temperature. P-replete cultures had higher growth and nitrogen and carbon fixation rates in the 22°C constant control, than in the corresponding variable treatments. However, physiological rates were not different in the P-replete constant and variable treatments at 30°C. In contrast, in P-limited cultures an advantage of constant temperature over variable temperature was not apparent. Phosphorus use efficiencies (PUE, mol N or C fixed h-1 mol cellular P-1) for nitrogen and carbon fixation were significantly elevated under P-limited conditions, and increased with temperature from 22 to 30°C, implying a potential advantage in a future warmer, P-limited environment. Taken together, these results imply that future increasing temperature and greater thermal variability could have significant feedback interactions with the projected intensification of P-limitation of marine N2-fixing cyanobacteria.
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Affiliation(s)
- Pingping Qu
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, United States
| | - Fei-Xue Fu
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, United States
| | - Joshua D. Kling
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, United States
| | - Megan Huh
- Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, United States
| | - Xinwei Wang
- School of Life Sciences, Xiamen University, Xiamen, China
| | - David A. Hutchins
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, United States
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17
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Nelson DR, Chaiboonchoe A, Fu W, Hazzouri KM, Huang Z, Jaiswal A, Daakour S, Mystikou A, Arnoux M, Sultana M, Salehi-Ashtiani K. Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae. iScience 2019; 11:450-465. [PMID: 30684492 PMCID: PMC6348204 DOI: 10.1016/j.isci.2018.12.035] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2018] [Revised: 11/07/2018] [Accepted: 12/28/2018] [Indexed: 12/05/2022] Open
Abstract
The activities of microalgae support nutrient cycling that helps to sustain aquatic and terrestrial ecosystems. Most microalgal species, especially those from the subtropics, are genomically uncharacterized. Here we report the isolation and genomic characterization of 22 microalgal species from subtropical coastal regions belonging to multiple clades and three from temperate areas. Halotolerant strains including Halamphora, Dunaliella, Nannochloris, and Chloroidium comprised the majority of these isolates. The subtropical-based microalgae contained arrays of methyltransferase, pyridine nucleotide-disulfide oxidoreductase, abhydrolase, cystathionine synthase, and small-molecule transporter domains present at high relative abundance. We found that genes for sulfate transport, sulfotransferase, and glutathione S-transferase activities were especially abundant in subtropical, coastal microalgal species and halophytic species in general. Our metabolomics analyses indicate lineage- and habitat-specific sets of biomolecules implicated in niche-specific biological processes. This work effectively expands the collection of available microalgal genomes by ∼50%, and the generated resources provide perspectives for studying halophyte adaptive traits. We have sequenced 20+ microallgal genomes from the subtropics This new collection increases the available microalgal genomes by ∼50% Metabolomics indicates lineage- and habitat-specificity of biomolecules Coastal, subtropical species of microalgae show expansion of sulfur-metabolic genes
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Affiliation(s)
- David R Nelson
- Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE
| | | | - Weiqi Fu
- Division of Science and Math, New York University Abu Dhabi, Abu Dhabi, UAE
| | - Khaled M Hazzouri
- Khalifa Center for Genetic Engineering and Biotechnology (KCGEB), United Arab Emirates University, Al-Ain, UAE
| | - Ziyuan Huang
- Department of Computer Science, New York University Shanghai, Shanghai, China
| | - Ashish Jaiswal
- Division of Science and Math, New York University Abu Dhabi, Abu Dhabi, UAE
| | - Sarah Daakour
- Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE
| | - Alexandra Mystikou
- Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE
| | - Marc Arnoux
- Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE
| | - Mehar Sultana
- Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE
| | - Kourosh Salehi-Ashtiani
- Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, UAE; Division of Science and Math, New York University Abu Dhabi, Abu Dhabi, UAE.
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18
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Villafañe VE, Paczkowska J, Andersson A, Durán Romero C, Valiñas MS, Helbling EW. Dual role of DOM in a scenario of global change on photosynthesis and structure of coastal phytoplankton from the South Atlantic Ocean. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 634:1352-1361. [PMID: 29710635 DOI: 10.1016/j.scitotenv.2018.04.121] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Revised: 04/08/2018] [Accepted: 04/09/2018] [Indexed: 06/08/2023]
Abstract
We evaluated the dual role of DOM (i.e., as a source of inorganic nutrients and as an absorber of solar radiation) on a phytoplankton community of the western South Atlantic Ocean. Using a combination of microcosms and a cluster approach, we simulated the future conditions of some variables that are highly influenced by global change in the region. We increased nutrients (i.e., anthropogenic input) and dissolved organic matter (DOM), and we decreased the pH, to assess their combined impact on growth rates (μ), species composition/abundance and size structure, and photosynthesis (considering in this later also the effects of light quality i.e., with and without ultraviolet radiation). We simulated two Future conditions (Fut) where nutrients and pH were similarly manipulated, but in one the physical role of DOM (Futout) was assessed whereas in the other (Futin) the physico-chemical role was evaluated; these conditions were compared with a control (Present condition, Pres). The μ significantly increased in both Fut conditions as compared to the Pres, probably due to the nutrient addition and acidification in the former. The highest μ were observed in the Futout, due to the growth of nanoplanktonic flagellates and diatoms. Cells in the Futin were photosynthetically less efficient as compared to those of the Futout and Pres, but these physiological differences, also between samples with or without solar UVR observed at the beginning of the experiment, decreased with time hinting for an acclimation process. The knowledge of the relative importance of both roles of DOM is especially important for coastal areas that are expected to receive higher inputs and will be more acidified in the future.
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Affiliation(s)
- Virginia E Villafañe
- Estación de Fotobiología Playa Unión, Casilla de Correos N°15, 9103 Rawson, Chubut, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina.
| | - Joanna Paczkowska
- Department of Ecology and Environmental Science, Umeå University, 901 87 Umeå, Sweden
| | - Agneta Andersson
- Department of Ecology and Environmental Science, Umeå University, 901 87 Umeå, Sweden.
| | - Cristina Durán Romero
- Estación de Fotobiología Playa Unión, Casilla de Correos N°15, 9103 Rawson, Chubut, Argentina
| | - Macarena S Valiñas
- Estación de Fotobiología Playa Unión, Casilla de Correos N°15, 9103 Rawson, Chubut, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina.
| | - E Walter Helbling
- Estación de Fotobiología Playa Unión, Casilla de Correos N°15, 9103 Rawson, Chubut, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina.
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19
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Phytoplankton as Key Mediators of the Biological Carbon Pump: Their Responses to a Changing Climate. SUSTAINABILITY 2018. [DOI: 10.3390/su10030869] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
The world’s oceans are a major sink for atmospheric carbon dioxide (CO2). The biological carbon pump plays a vital role in the net transfer of CO2 from the atmosphere to the oceans and then to the sediments, subsequently maintaining atmospheric CO2 at significantly lower levels than would be the case if it did not exist. The efficiency of the biological pump is a function of phytoplankton physiology and community structure, which are in turn governed by the physical and chemical conditions of the ocean. However, only a few studies have focused on the importance of phytoplankton community structure to the biological pump. Because global change is expected to influence carbon and nutrient availability, temperature and light (via stratification), an improved understanding of how phytoplankton community size structure will respond in the future is required to gain insight into the biological pump and the ability of the ocean to act as a long-term sink for atmospheric CO2. This review article aims to explore the potential impacts of predicted changes in global temperature and the carbonate system on phytoplankton cell size, species and elemental composition, so as to shed light on the ability of the biological pump to sequester carbon in the future ocean.
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20
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Saharan dust inputs and high UVR levels jointly alter the metabolic balance of marine oligotrophic ecosystems. Sci Rep 2016; 6:35892. [PMID: 27775100 PMCID: PMC5075918 DOI: 10.1038/srep35892] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2016] [Accepted: 10/06/2016] [Indexed: 01/13/2023] Open
Abstract
The metabolic balance of the most extensive bioma on the Earth is a controversial topic of the global-change research. High ultraviolet radiation (UVR) levels by the shoaling of upper mixed layers and increasing atmospheric dust deposition from arid regions may unpredictably alter the metabolic state of marine oligotrophic ecosystems. We performed an observational study across the south-western (SW) Mediterranean Sea to assess the planktonic metabolic balance and a microcosm experiment in two contrasting areas, heterotrophic nearshore and autotrophic open sea, to test whether a combined UVR × dust impact could alter their metabolic balance at mid-term scales. We show that the metabolic state of oligotrophic areas geographically varies and that the joint impact of UVR and dust inputs prompted a strong change towards autotrophic metabolism. We propose that this metabolic response could be accentuated with the global change as remote-sensing evidence shows increasing intensities, frequencies and number of dust events together with variations in the surface UVR fluxes on SW Mediterranean Sea. Overall, these findings suggest that the enhancement of the net carbon budget under a combined UVR and dust inputs impact could contribute to boost the biological pump, reinforcing the role of the oligotrophic marine ecosystems as CO2 sinks.
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21
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Rastogi RP, Madamwar D, Incharoensakdi A. Bloom Dynamics of Cyanobacteria and Their Toxins: Environmental Health Impacts and Mitigation Strategies. Front Microbiol 2015; 6:1254. [PMID: 26635737 PMCID: PMC4646972 DOI: 10.3389/fmicb.2015.01254] [Citation(s) in RCA: 115] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2015] [Accepted: 10/28/2015] [Indexed: 11/13/2022] Open
Abstract
Cyanobacteria are ecologically one of the most prolific groups of phototrophic prokaryotes in both marine and freshwater habitats. Both the beneficial and detrimental aspects of cyanobacteria are of considerable significance. They are important primary producers as well as an immense source of several secondary products, including an array of toxic compounds known as cyanotoxins. Abundant growth of cyanobacteria in freshwater, estuarine, and coastal ecosystems due to increased anthropogenic eutrophication and global climate change has created serious concern toward harmful bloom formation and surface water contamination all over the world. Cyanobacterial blooms and the accumulation of several cyanotoxins in water bodies pose severe ecological consequences with high risk to aquatic organisms and global public health. The proper management for mitigating the worldwide incidence of toxic cyanobacterial blooms is crucial for maintenance and sustainable development of functional ecosystems. Here, we emphasize the emerging information on the cyanobacterial bloom dynamics, toxicology of major groups of cyanotoxins, as well as a perspective and integrative approach to their management.
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Affiliation(s)
- Rajesh P. Rastogi
- BRD School of Biosciences, Sardar Patel UniversityAnand, India
- Laboratory of Cyanobacterial Biotechnology, Department of Biochemistry, Faculty of Science, Chulalongkorn UniversityBangkok, Thailand
| | - Datta Madamwar
- BRD School of Biosciences, Sardar Patel UniversityAnand, India
| | - Aran Incharoensakdi
- Laboratory of Cyanobacterial Biotechnology, Department of Biochemistry, Faculty of Science, Chulalongkorn UniversityBangkok, Thailand
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22
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Rastogi RP, Sonani RR, Madamwar D. Effects of PAR and UV Radiation on the Structural and Functional Integrity of Phycocyanin, Phycoerythrin and Allophycocyanin Isolated from the Marine Cyanobacterium Lyngbya sp. A09DM. Photochem Photobiol 2015; 91:837-44. [PMID: 25763657 DOI: 10.1111/php.12449] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2014] [Accepted: 03/04/2015] [Indexed: 12/14/2022]
Abstract
An in vitro analysis of the effects of photosynthetically active and ultraviolet radiations was executed to assess the photostability of biologically relevant pigments phycocyanin (PC), phycoerythrin (PE) and allophycocyanin (APC) isolated from Lyngbya sp. A09DM. Ultraviolet (UV) irradiances significantly affected the integrity of PC, PE and APC; however, PAR showed least effect. UV radiation affected the bilin chromophores covalently attached to phycobiliproteins (PBPs). Almost complete elimination of the chromophore bands associated with α- and β-subunit of PE and APC occurred after 4 h of UV-B exposure. After 5 h of UV-B exposure, the content of PC, PE and APC decreased by 51.65%, 96.8% and 96.53%, respectively. Contrary to PAR and UV-A radiation, a severe decrease in fluorescence of all PBPs was observed under UV-B irradiation. The fluorescence activity of extracted PBP was gradually inhibited immediately after 15-30 min of UV-B exposure. In comparison to the PC, the fluorescence properties of PE and APC were severely lost under UV-B radiation. Moreover, the present study indicates that UV-B radiation can damage the structural and functional integrity of phycobiliproteins leading to the loss of their ecological and biological functions.
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Affiliation(s)
| | - Ravi Raghav Sonani
- BRD School of Biosciences, Sardar Patel University, Anand, Gujarat, India
| | - Datta Madamwar
- BRD School of Biosciences, Sardar Patel University, Anand, Gujarat, India
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23
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Kesheri M, Kanchan S, Richa, Sinha RP. Isolation and in silico analysis of Fe-superoxide dismutase in the cyanobacterium Nostoc commune. Gene 2014; 553:117-25. [PMID: 25303871 DOI: 10.1016/j.gene.2014.10.010] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2014] [Revised: 10/02/2014] [Accepted: 10/06/2014] [Indexed: 12/22/2022]
Abstract
Cyanobacteria are known to endure various stress conditions due to the inbuilt potential for oxidative stress alleviation owing to the presence of an array of antioxidants. The present study shows that Antarctic cyanobacterium Nostoc commune possesses two antioxidative enzymes viz., superoxide dismutase (SOD) and catalase that jointly cope with environmental stresses prevailing at its natural habitat. Native-PAGE analysis illustrates the presence of a single prominent isoform recognized as Fe-SOD and three distinct isoforms of catalase. The protein sequence of Fe-SOD in N. commune retrieved from NCBI protein sequence database was used for in silico analysis. 3D structure of N. commune was predicted by comparative modeling using MODELLER 9v11. Further, this model was validated for its quality by Ramachandran plot, ERRAT, Verify 3D and ProSA-web which revealed good structure quality of the model. Multiple sequence alignment showed high conservation in N and C-terminal domain regions along with all metal binding positions in Fe-SOD which were also found to be highly conserved in all 28 cyanobacterial species under study, including N. commune. In silico prediction of isoelectric point and molecular weight of Fe-SOD was found to be 5.48 and 22,342.98Da respectively. The phylogenetic tree revealed that among 28 cyanobacterial species, Fe-SOD in N. commune was the closest evolutionary homolog of Fe-SOD in Nostoc punctiforme as evident by strong bootstrap value. Thus, N. commune may serve as a good biological model for studies related to survival of life under extreme conditions prevailing at the Antarctic region. Moreover cyanobacteria may be exploited for biochemical and biotechnological applications of enzymatic antioxidants.
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Affiliation(s)
- Minu Kesheri
- Laboratory of Photobiology and Molecular Microbiology, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Swarna Kanchan
- Department of Biological Science, Birla Institute of Technology and Science, Pilani, Rajasthan 333031, India
| | - Richa
- Laboratory of Photobiology and Molecular Microbiology, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Rajeshwar P Sinha
- Laboratory of Photobiology and Molecular Microbiology, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India.
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