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Nitu S, Milea MS, Boran S, Mosoarca G, Zamfir AD, Popa S, Funar-Timofei S. Experimental and Computational Study of Novel Pyrazole Azo Dyes as Colored Materials for Light Color Paints. MATERIALS (BASEL, SWITZERLAND) 2022; 15:5507. [PMID: 36013644 PMCID: PMC9410184 DOI: 10.3390/ma15165507] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 07/21/2022] [Accepted: 07/25/2022] [Indexed: 06/15/2023]
Abstract
This paper presents the synthesis of eight new pyrazole azo dyes using ethyl 5-amino-3-methyl-1H-pyrazole-4-carboxylate as the diazotization component and various active methylene derivatives as coupling components. These new azo dyes were characterized by spectroscopic (FT-IR, UV-VIS), and spectrometric (1H NMR, 13C NMR, MS) analyses. The dye structures were modeled by the MMFF94s force field and quantum chemical density functional theory (DFT) calculations using the B3LYP functional and the 6-311G(d,p) basis set, in the gas phase. Weak electrostatic hydrogen bonds for the azo and hydrazo dye tautomers were found in the ground state. The CIS, TD (using the B3LYP and M06-2X functionals), and ZINDO methods were used to estimate the dye UV-VIS spectra in ethanol, which were compared with the experimental ones. The anti-configuration arrangement of the π-bonds and the presence of the prevalent hydrazo dye tautomer were supported by the computed 1H NMR and 13C NMR spectra. A good accordance between the experimental and predicted absorption maxima and chemical shifts was observed. Color investigations using the CIEL*a*b* space were conducted for all dyes in powder and for their mixtures in water-based acrylic resins. The results confirm the newly synthesized dyes' color properties and that they might be used for light color paints in the varnishes industry.
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Affiliation(s)
- Sabina Nitu
- Faculty of Industrial Chemistry and Environmental Engineering, Politehnica University of Timisoara, Bd. V. Parvan, No. 6, 300223 Timisoara, Romania
| | - Marius Silviu Milea
- Faculty of Industrial Chemistry and Environmental Engineering, Politehnica University of Timisoara, Bd. V. Parvan, No. 6, 300223 Timisoara, Romania
| | - Sorina Boran
- Faculty of Industrial Chemistry and Environmental Engineering, Politehnica University of Timisoara, Bd. V. Parvan, No. 6, 300223 Timisoara, Romania
| | - Giannin Mosoarca
- Faculty of Industrial Chemistry and Environmental Engineering, Politehnica University of Timisoara, Bd. V. Parvan, No. 6, 300223 Timisoara, Romania
| | - Alina D. Zamfir
- National Institute for Research and Development in Electrochemistry and Condensed Matter, 300224 Timisoara, Romania
| | - Simona Popa
- Faculty of Industrial Chemistry and Environmental Engineering, Politehnica University of Timisoara, Bd. V. Parvan, No. 6, 300223 Timisoara, Romania
| | - Simona Funar-Timofei
- “Coriolan Dragulescu” Institute of Chemistry, Romanian Academy, 300223 Timisoara, Romania
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Krishnappa PB, Kodoth AK, Kulal P, Badalamoole V. Effective removal of ionic dyes from aqueous media using modified karaya gum–PVA semi-interpenetrating network system. Polym Bull (Berl) 2022. [DOI: 10.1007/s00289-022-04169-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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3
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Kumar N, Murli C, Varma M, Poswal HK, Thomas S, Kshirsagar RJ. High pressure Raman investigation on trans-urocanic acid. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2022; 266:120438. [PMID: 34627016 DOI: 10.1016/j.saa.2021.120438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Revised: 08/27/2021] [Accepted: 09/22/2021] [Indexed: 06/13/2023]
Abstract
Trans-urocanic acid (t-UCA) is an important epidermal UV protector predominantly found in human skin. Exposure of UV radiation triggers photoisomerization of t-UCA into its other conformer, cis-urocanic acid (cis-UCA), which has been shown to be a mediator of UV-induced immune-suppression leading to skin cancer. In this report, we present the investigation of molecular changes of t-UCA under high pressures by in-situ high pressure Raman spectroscopy. The study indicates onset of ring opening polymerization of t-UCA at pressure above 1.4 GPa. At pressures beyond 5 GPa, a well discernible characteristic vibrational mode (CC stretch) accompanied by several other spectral features such as δ CO2- and δ NH modes of cis-UCA point towards the isomerization of residual t-UCA monomers into cis-UCA. The content of cis-UCA gradually increased with increase in pressure. On release to ambient conditions, the spectrum of the quenched sample showed Raman modes of polymer and cis-UCA indicating that the changes are irreversible.
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Affiliation(s)
- Naveen Kumar
- Infrared Laser Spectroscopy Section, Bhabha Atomic Research Centre, Trombay, Mumbai 85, India; Homi Bhabha National Institute, Anushaktinagar, Mumbai 94, India.
| | - C Murli
- High Pressure & Synchrotron Radiation Physics Division, Bhabha Atomic Research Centre, Trombay, Mumbai 85, India; Homi Bhabha National Institute, Anushaktinagar, Mumbai 94, India
| | - Meera Varma
- High Pressure & Synchrotron Radiation Physics Division, Bhabha Atomic Research Centre, Trombay, Mumbai 85, India
| | - H K Poswal
- High Pressure & Synchrotron Radiation Physics Division, Bhabha Atomic Research Centre, Trombay, Mumbai 85, India; Homi Bhabha National Institute, Anushaktinagar, Mumbai 94, India
| | - S Thomas
- High Pressure & Synchrotron Radiation Physics Division, Bhabha Atomic Research Centre, Trombay, Mumbai 85, India.
| | - R J Kshirsagar
- Infrared Laser Spectroscopy Section, Bhabha Atomic Research Centre, Trombay, Mumbai 85, India; Homi Bhabha National Institute, Anushaktinagar, Mumbai 94, India
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Pandey J, Prajapati P, Tandon P, Sinha K, Ayala AP, Ellena J. Vibrational and conformational analysis of structural phase transition in Estradiol 17β valerate with temperature. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 263:120219. [PMID: 34332239 DOI: 10.1016/j.saa.2021.120219] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2021] [Revised: 07/03/2021] [Accepted: 07/19/2021] [Indexed: 06/13/2023]
Abstract
Estradiol 17β valerate (E2V) is a hormonal medicine widely used in hormone replacement therapy. E2V undergoes a reversible isosymmetric structural phase transition at low temperature (̴ 250 K) which results from the reorientation of the valerate chain. The reversible isosymmetric structural phase transition follows Ehrenfest's classification when described as first-order and Buerger's classification when classified as order-disorder. The conformational difference also induces changes in molecular torsional angles and on the hydrogen bond pattern. In combination with density functional theory (DFT) calculations, vibrational spectroscopy has been used to correlate the valerate chain modes with the modifications of the dihedral angles on phase transition. We are expecting improvement in our understanding of the phase transition mechanism driven by the temperature. The Conformational analysis reveals the feasible structures corresponding to changes in the dihedral angles associated with the valerate chain. The infrared spectra of calculated conformers are in good agreement with the experimental spectra of E2V structure recorded at room temperature revealing that the changes in valerate chain modes at 1115 cm-1, 1200 cm-1and 1415 cm-1 fingerprint the molecular conformation. An investigation made to determine the ligand-protein interaction of E2V through docking against estrogen receptor (ER) reveals the inhibitive and agonist nature of E2V.
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Affiliation(s)
- Jaya Pandey
- Department of Physics, University of Lucknow, Lucknow 226007, India
| | - Preeti Prajapati
- Department of Physics, University of Lucknow, Lucknow 226007, India
| | - Poonam Tandon
- Department of Physics, University of Lucknow, Lucknow 226007, India.
| | - Kirti Sinha
- Department of Physics, University of Lucknow, Lucknow 226007, India
| | - Alejandro Pedro Ayala
- Departamento de Fìsica, Universidade Federal do Ceará, C.P. 6030, 60.455-900 Fortaleza, CE Brazil
| | - Javier Ellena
- Instituto de Fìsica de São Carlos, Universidade de São Paulo,C.P 369, 13560-970,São Carlos, S P, Brazil
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Das M, Singh KK, Khan E, Sinha RK, Singh RK, Tandon P, Gangopadhyay D. N-Acetylcysteine versus arsenic poisoning: A mechanistic study of complexation by molecular spectroscopy and density functional theory. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.117168] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Qu G, Bilal R, Xin M, Lv Z, Jin G, Tan Y, Yao Z, Cai H. Phase transition-induced changes in the Raman properties of DMSO/benzene binary systems. Phys Chem Chem Phys 2021; 23:9211-9217. [PMID: 33885110 DOI: 10.1039/d1cp00627d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
The Raman spectra of dimethylsulfoxide (DMSO)/benzene binary mixtures were studied by decreasing the temperature from 333 K to 263 K with the aim to reveal the molecular interaction properties during phase transition. The intensity of the Raman band for benzene at 992 cm-1 showed an increasing trend in the liquid and solid phases, while it exhibited a highly decreasing trend during the liquid-solid phase transition. The potential energy was calculated to study the effect of intermolecular interaction distance between DMSO and benzene on Raman intensity. The observations indicated that the blueshift of the low-frequency bands of DMSO was significantly different from the redshift of its high-frequency bands. The hydrogen bond generated between DMSO and benzene was well formed in the binary systems. This interaction inducing an enhanced hydrogen bond between the binary systems and attenuated C-H bonds led to opposite Raman shift variations with decreasing temperature. The Raman bands of DMSO at 1425 cm-1, 2899 cm-1, and 2992 cm-1 each split into two peaks after phase transition. The splitting of the Raman bands of DMSO at 1417 cm-1, 2895 cm-1, and 2982 cm-1 cropped up as the temperature dropped to the transformation point of 288 K. This is attributed to the phase transition-induced latent def.(C7) atomic vibrations corresponding to the individual methyl groups of DMSO. The implications of these analyses are expected to be helpful to understand the effect of phase transition on the Raman properties of binary solutions.
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Affiliation(s)
- Guannan Qu
- School of Science, Changchun University of Science and Technology, Changchun, 130022, China.
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de Liss Meza López F, Khan S, da Silva MA, Anchieta Gomes Neto J, Picasso G, Sotomayor MDPT. Systematic study on the synthesis of novel ion-imprinted polymers based on rhodizonate for the highly selective removal of Pb(II). REACT FUNCT POLYM 2021. [DOI: 10.1016/j.reactfunctpolym.2020.104805] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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8
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Kalhor P, Ghandi K, Ashraf H, Yu Z. The structural properties of a ZnCl 2-ethylene glycol binary system and the peculiarities at the eutectic composition. Phys Chem Chem Phys 2021; 23:13136-13147. [PMID: 34075959 DOI: 10.1039/d1cp00573a] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
ATR-FTIR spectroscopy was performed on a series of ZnCl2-ethylene glycol (EG) mixtures with a wide-range of compositions (1 : 1.5-1 : 14 in molar ratios), involving the stable ZnCl2-4EG deep-eutectic solvent (DES) composition, to explore the spectral variations, structural heterogeneity, and hydrogen bonding (H-bonding) properties. To enhance the resolution of the spectra, excess absorption and two-dimensional correlation spectroscopies were employed. In the initial IR spectra, a quasi-isosbestic point was identified, signaling that the major disturbance on EG microstructures by adding ZnCl2 is to form a distinct complex. Further analysis uncovered the main transformation process to be from the EG tetramer to the ZnCl2-4EG complex. It was also found that as the EG content increases, negative charge increasingly transfers to ZnCl2, resulting in the strengthening of the Zn ← O coordination bonds and the weakening and finally dissociation of Zn-Cl bonds. Regarding the ZnCl2-4EG DES, several incomparable specificities were observed. It was found that ZnCl2 destructed the H-bonding network of pure EG to the largest extent, resulting in the highest production of the dimer and trimer of EG. Moreover, in comparison with other compositions, the ZnCl2-4EG DES showed abrupt increases in the negative charge of the salt, the length of the Zn-Cl bond, and the strength of the Zn ← O coordination bond. All these imply the strongest intermolecular interactions and the highest solvation of ZnCl2 in EG at the eutectic composition compared to those of other mixtures, resulting in a super-stable liquid mixture. The work provides physical insights into the structural and interactive properties of deep-eutectic solvents.
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Affiliation(s)
- Payam Kalhor
- MOE Key Laboratory of Bioorganic Phosphorous Chemistry and Chemical Biology, Department of Chemistry, Tsinghua University, Beijing 100084, China.
| | - Khashayar Ghandi
- Department of Chemistry, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Hamad Ashraf
- MOE Key Laboratory of Bioorganic Phosphorous Chemistry and Chemical Biology, Department of Chemistry, Tsinghua University, Beijing 100084, China.
| | - Zhiwu Yu
- MOE Key Laboratory of Bioorganic Phosphorous Chemistry and Chemical Biology, Department of Chemistry, Tsinghua University, Beijing 100084, China.
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9
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Gurina D, Surov O, Voronova M, Zakharov A. Molecular Dynamics Simulation of Polyacrylamide Adsorption on Cellulose Nanocrystals. NANOMATERIALS 2020; 10:nano10071256. [PMID: 32605224 PMCID: PMC7408107 DOI: 10.3390/nano10071256] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Revised: 06/24/2020] [Accepted: 06/25/2020] [Indexed: 11/20/2022]
Abstract
Classical molecular dynamics simulations of polyacrylamide (PAM) adsorption on cellulose nanocrystals (CNC) in a vacuum and a water environment are carried out to interpret the mechanism of the polymer interactions with CNC. The structural behavior of PAM is studied in terms of the radius of gyration, atom–atom radial distribution functions, and number of hydrogen bonds. The structural and dynamical characteristics of the polymer adsorption are investigated. It is established that in water the polymer macromolecules are mainly adsorbed in the form of a coil onto the CNC facets. It is found out that water and PAM sorption on CNC is a competitive process, and water weakens the interaction between the polymer and CNC.
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Affiliation(s)
- Darya Gurina
- Correspondence: (D.G.); (O.S.); Tel.: +7-493-2351-869 (D.G.); +7-493-2351-545 (O.S.)
| | - Oleg Surov
- Correspondence: (D.G.); (O.S.); Tel.: +7-493-2351-869 (D.G.); +7-493-2351-545 (O.S.)
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10
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Sanchora P, Pandey DK, Kagdada HL, Materny A, Singh DK. Impact of alkyl chain length and water on the structure and properties of 1-alkyl-3-methylimidazolium chloride ionic liquids. Phys Chem Chem Phys 2020; 22:17687-17704. [DOI: 10.1039/d0cp01686a] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Conformational isomerism in Cnmim Cl (n = 2, 4, 6, 8, and 10) is identified by marker IR bands for the first time.
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Affiliation(s)
- Paridhi Sanchora
- Department of Physics
- Institute of Infrastructure Technology Research and Management
- Ahmedabad
- India
| | - Deepak K. Pandey
- Department of Physics
- Institute of Infrastructure Technology Research and Management
- Ahmedabad
- India
| | - Hardik L. Kagdada
- Department of Physics
- Institute of Infrastructure Technology Research and Management
- Ahmedabad
- India
| | - Arnulf Materny
- Department of Physics and Earth Sciences
- Jacobs University Bremen
- Bremen
- Germany
| | - Dheeraj K. Singh
- Department of Physics
- Institute of Infrastructure Technology Research and Management
- Ahmedabad
- India
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11
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Sanchora P, Pandey DK, Rana D, Materny A, Singh DK. Impact of Size and Electronegativity of Halide Anions on Hydrogen Bonds and Properties of 1-Ethyl-3-methylimidazolium-Based Ionic Liquids. J Phys Chem A 2019; 123:4948-4963. [DOI: 10.1021/acs.jpca.9b04116] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Paridhi Sanchora
- Department of Physics, Institute of Infrastructure Technology Research & Management, Ahmedabad 380026, India
| | - Deepak K. Pandey
- Department of Physics, Institute of Infrastructure Technology Research & Management, Ahmedabad 380026, India
| | - Debkumar Rana
- Physics and Earth Sciences, Jacobs University Bremen, 28759 Bremen, Germany
| | - Arnulf Materny
- Physics and Earth Sciences, Jacobs University Bremen, 28759 Bremen, Germany
| | - Dheeraj K. Singh
- Department of Physics, Institute of Infrastructure Technology Research & Management, Ahmedabad 380026, India
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12
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A series of cocrystals formed by 2,3-dimethylpyrazine bridging various aromatic acids through hydrogen bonds: Synthesis, structural characterization and synthon discussion. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.03.105] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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13
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Mg co-ordination with potential carcinogenic molecule acrylamide: Spectroscopic, computational and cytotoxicity studies. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2017.10.095] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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Ren H, Mei Z, Chen Y, Chen S, Ge Z, Hu J. Synthesis of zwitterionic acrylamide copolymers for biocompatible applications. J BIOACT COMPAT POL 2017. [DOI: 10.1177/0883911517707776] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
In order to prepare acrylamide copolymers with non-toxicity for environment-friendly materials, a series of zwitterionic acrylamide copolymers with varying acrylamide content were synthesized with DMAPS (3-dimethyl (methacryloyloxyethyl) ammonium propane sulfonate) and acrylamide via free radical polymerization. The structural properties and cytotoxicity are carefully investigated. The results demonstrate that DMAPS- co-acrylamide copolymers contain DMAPS and acrylamide segments that form a matrix consisting of strong electrostatic interactions as well as strong hydrogen bonding. DMAPS segments exhibit negligible influence on the glass phase transition behavior, yet affect the composite’s water-contact angle. The optimum hydrophilic properties are obtained by adjusting the acrylamide content to 50 wt%. All DMAPS- co-acrylamide copolymers are measured to be non-toxic. The DMAPS segments allow for suitable contribution to the biocompatibility of the synthesized copolymer, in which copolymers containing higher DMAPS content demonstrate better biocompatibility.
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Affiliation(s)
- Huanhuan Ren
- Guangdong Research Center for Interfacial Engineering of Functional Materials, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
- Shenzhen Key Laboratory of Polymer Science and Technology, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
| | - Zhankui Mei
- Guangdong Research Center for Interfacial Engineering of Functional Materials, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
- Shenzhen Key Laboratory of Polymer Science and Technology, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
| | - Yangyang Chen
- Guangdong Research Center for Interfacial Engineering of Functional Materials, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
- Shenzhen Key Laboratory of Polymer Science and Technology, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
| | - Shaojun Chen
- Guangdong Research Center for Interfacial Engineering of Functional Materials, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
- Shenzhen Key Laboratory of Polymer Science and Technology, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
| | - Zaochuan Ge
- Guangdong Research Center for Interfacial Engineering of Functional Materials, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
- Shenzhen Key Laboratory of Polymer Science and Technology, College of Materials Science and Engineering, Shenzhen University, Shenzhen, China
| | - Jinlian Hu
- Insititute of Textiles and Clothing, The Hong Kong Polytechnic University, Hong Kong
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Das B, Chakraborty A, Chakraborty S. Effect of ionic charge on O H⋯Se hydrogen bond: A computational study. COMPUT THEOR CHEM 2017. [DOI: 10.1016/j.comptc.2016.12.025] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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16
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Bergamonti L, Graiff C, Tegoni M, Predieri G, Bellot-Gurlet L, Lottici PP. Raman and NMR kinetics study of the formation of amidoamines containing N-hydroxyethyl groups and investigations on their Cu(II) complexes in water. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2017; 171:515-524. [PMID: 27592056 DOI: 10.1016/j.saa.2016.07.041] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2016] [Revised: 07/27/2016] [Accepted: 07/27/2016] [Indexed: 06/06/2023]
Abstract
Three amidoamines containing the N-hydroxyethyl group (HOEt), namely (HOEt)2N(CH2)2C(O)NH2 (1), [(HOEt)2N(CH2)2C(O)NH]2CH2 (2) and HOEtN[(CH2)2C(O)NH2]2 (3) have been synthesized by reacting diethanolamine HOEt2NH with acrylamide and N,N'-methylenebisacrylamide (respectively 1 and 2) and ethanolamine HOEtNH2 with acrylamide (3). Four other compounds corresponding to 1 and 2, but derived from sec-amines Me2NH (4 and 5) and Et2NH (6 and 7) have been prepared for the sake of comparison of the spectroscopic features. All compounds have been obtained by the well-known aza-Michael addition between an N-nucleophile and an activated vinyl group. The reaction in water between diethanolamine and acrylamide leading to 1 has been monitored in situ by Raman and NMR spectroscopy, both techniques confirming second order kinetics and giving values for kinetic constants in excellent agreement. The coordination ability of 1 and 2 towards Cu2+ in water has been studied by the Job's plot method. Spectroscopic data indicate that ligand 1 prevalently forms a 4:1 Ligand/Metal complex with a (N,O3) coordination set on the equatorial plane of Cu2+, whereas ligand 2, containing two amide functionalities bridged by a methylene group, appears able to form a 1:1 Ligand/Metal chelate species, again with a (N,O3) donor set around copper.
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Affiliation(s)
- Laura Bergamonti
- Dipartimento di Chimica, University of Parma, Viale delle Scienze 17/A, 43124 Parma, Italy.
| | - Claudia Graiff
- Dipartimento di Chimica, University of Parma, Viale delle Scienze 17/A, 43124 Parma, Italy.
| | - Matteo Tegoni
- Dipartimento di Chimica, University of Parma, Viale delle Scienze 17/A, 43124 Parma, Italy
| | - Giovanni Predieri
- Dipartimento di Chimica, University of Parma, Viale delle Scienze 17/A, 43124 Parma, Italy
| | - Ludovic Bellot-Gurlet
- Sorbonne Universités, MONARIS, UMR 8233 UPMC-CNRS, Université Pierre et Marie Curie Paris 6, 75252 Paris, France
| | - Pier Paolo Lottici
- Dipartimento di Fisica e Scienze della Terra, University of Parma, Viale delle Scienze 7/A, 43124 Parma, Italy
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17
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Wang YS, Lin YD, Chao SD. Hydrogen-bonding Structures and Energetics of Acrylamide Isomers, Tautomers, and Dimers: Anab initioStudy and Spectral Analysis. J CHIN CHEM SOC-TAIP 2016. [DOI: 10.1002/jccs.201600273] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Yi-Siang Wang
- Institute of Applied Mechanics; National Taiwan University; Taipei 106 Taiwan
| | - Yi-De Lin
- Institute of Applied Mechanics; National Taiwan University; Taipei 106 Taiwan
| | - Sheng Der Chao
- Institute of Applied Mechanics; National Taiwan University; Taipei 106 Taiwan
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18
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Singh S, Donfack P, Srivastava SK, Singh DK, Materny A, Asthana BP, Mishra PC. Monitoring potential molecular interactions of adenine with other amino acids using Raman spectroscopy and DFT modeling. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 149:647-655. [PMID: 25985129 DOI: 10.1016/j.saa.2015.04.066] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2014] [Revised: 04/21/2015] [Accepted: 04/22/2015] [Indexed: 06/04/2023]
Abstract
We report on the modes of inter-molecular interaction between adenine (Ade) and the amino acids: glycine (Gly), lysine (Lys) and arginine (Arg) using Raman spectroscopy of binary mixtures of adenine and each of the three amino acids at varying molar ratios in the spectral region 1550-550 cm(-1). We focused our attention on certain specific changes in the Raman bands of adenine arising due to its interaction with the amino acids. While the changes are less apparent in the Ade/Gly system, in the Ade/Lys or Ade/Arg systems, significant changes are observed, particularly in the Ade Raman bands that involve the amino group moiety and the N7 and N1 atoms of the purine ring. The ν(N1-C6), ν(N1-C2), δ(C8-H) and δ(N7-C8-N9) vibrations at 1486, 1332, 1253 and 948 cm(-1) show spectral changes on varying the Ade to amino acid molar ratio, the extent of variation being different for the three amino acids. This observation suggests a specific interaction mode between Ade and Lys or Arg, which is due to the hydrogen bonding. The measured spectral changes provide a clear indication that the interaction of Ade depends strongly on the structures of the amino acids, especially their side chains. Density functional theory (DFT) calculations were carried out to elucidate the most probable interaction modes of Ade with the different amino acids.
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Affiliation(s)
- Shweta Singh
- Laser and Spectroscopy Laboratory, Department of Physics, Banaras Hindu University, Varanasi 221005, India.
| | - P Donfack
- School of Engineering and Science, Jacobs University Bremen, Campus Ring 1, D-28759 Bremen, Germany
| | - Sunil K Srivastava
- Department of Pure and Applied Physics, Guru Ghasidas University, Main Campus, Koni, Bilaspur 495009, India
| | - Dheeraj K Singh
- Department of Physics, Sogang University, Seoul 121-742, South Korea
| | - A Materny
- School of Engineering and Science, Jacobs University Bremen, Campus Ring 1, D-28759 Bremen, Germany
| | - B P Asthana
- Laser and Spectroscopy Laboratory, Department of Physics, Banaras Hindu University, Varanasi 221005, India
| | - P C Mishra
- Laser and Spectroscopy Laboratory, Department of Physics, Banaras Hindu University, Varanasi 221005, India
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