1
|
Pintus A, Arca M. 1,2-Diselenolene ligands and related metal complexes: Design, synthesis and applications. Coord Chem Rev 2022. [DOI: 10.1016/j.ccr.2022.214444] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
2
|
Zhang W, Lee C, Bushnell EA. Computational investigation of the reaction of nickel-bis(dithiolene) and nickel-bis(diselenolene) complexes with OH. CAN J CHEM 2021. [DOI: 10.1139/cjc-2020-0318] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
In the present study, the reactivity of OH with Ni(X2C2H2)2 and Ni(X2C2H2)2 – (where X = S or Se) was investigated. From the thermodynamics, it found that the OH radical attacks a backbone C atom of the Ni(S2C2H2)2 complex. For the Ni(Se2C2H2)2 complex, the OH is predicted to target the ligating chalcogen atom. The significance of this is that with the attack of OH to a backbone C atom, the thermodynamic cost to lose a proton or hydrogen atom ranges from exergonic to marginally endergonic depending on the oxidation state of the complex. Notably, such a process results in a rearrangement of the complex, likely leading to deactivation of the catalyst. Where OH has attacked a ligating chalcogenide atom, the thermodynamic cost to lose a proton or hydrogen is endergonic regardless of oxidation state of the complex. Where OH attacks a coordinating chalcogenide atom, the thermodynamics for the addition of a proton was considered. At the present level of theory, it was found that for the dithiolene and diselenolene monoanionic complexes, the addition of a proton is marginally endergonic. However, following protonation, the loss of water is significantly exergonic and results in the regeneration of the neutral non-oxidized Ni complex. Given the greater tendency for OH to attack Se versus S, it may be speculated that the use of diselenolene ligands may offer a means to protect the Ni complex from damaging OH radicals due to the thermodynamic tendency for OH to attack Se atom of the diselenolene complexes not seen in the dithiolene complexes.
Collapse
Affiliation(s)
- Wenyuan Zhang
- Department of Chemistry, Brandon University, 270-18th Street, Brandon, MB R7A 6A9, Canada
- Department of Chemistry, Brandon University, 270-18th Street, Brandon, MB R7A 6A9, Canada
| | - Changmin Lee
- Department of Chemistry, Brandon University, 270-18th Street, Brandon, MB R7A 6A9, Canada
- Department of Chemistry, Brandon University, 270-18th Street, Brandon, MB R7A 6A9, Canada
| | - Eric A.C. Bushnell
- Department of Chemistry, Brandon University, 270-18th Street, Brandon, MB R7A 6A9, Canada
- Department of Chemistry, Brandon University, 270-18th Street, Brandon, MB R7A 6A9, Canada
| |
Collapse
|
3
|
Luedecke KM, Wang Y, Tran PM, Threlkeld HL, Wei P, Xie Y, Schaefer HF, Robinson GH. C5 Metalation of Imidazole-Based Monothiolates en Route to Selenothiolates. Organometallics 2020. [DOI: 10.1021/acs.organomet.0c00201] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Kaitlin M. Luedecke
- Department of Chemistry and the Center of Computational Chemistry, The University of Georgia, Athens, Georgia 30602-2556, United States
| | - Yuzhong Wang
- Department of Chemistry and the Center of Computational Chemistry, The University of Georgia, Athens, Georgia 30602-2556, United States
| | - Phuong M. Tran
- Department of Chemistry and the Center of Computational Chemistry, The University of Georgia, Athens, Georgia 30602-2556, United States
| | - Holli L. Threlkeld
- Department of Chemistry and the Center of Computational Chemistry, The University of Georgia, Athens, Georgia 30602-2556, United States
| | - Pingrong Wei
- Department of Chemistry and the Center of Computational Chemistry, The University of Georgia, Athens, Georgia 30602-2556, United States
| | - Yaoming Xie
- Department of Chemistry and the Center of Computational Chemistry, The University of Georgia, Athens, Georgia 30602-2556, United States
| | - Henry F. Schaefer
- Department of Chemistry and the Center of Computational Chemistry, The University of Georgia, Athens, Georgia 30602-2556, United States
| | - Gregory H. Robinson
- Department of Chemistry and the Center of Computational Chemistry, The University of Georgia, Athens, Georgia 30602-2556, United States
| |
Collapse
|
4
|
Abad KP, Bushnell EAC. Computational Investigation into the Ni(SeNHC 2(CN) 2) 2 and Ni(SNHC 2(CN) 2) 2 Complexes as Potential Catalysts for Hydrogen Production. J Phys Chem A 2019; 123:7822-7827. [PMID: 31425651 DOI: 10.1021/acs.jpca.9b06039] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
To reduce our carbon footprint, we must look at alternative non-carbon-containing fuels to prevent continued global climate change. One environmentally friendly alternative fuel is molecular hydrogen. Herein the Ni(SeNHC2(CN)2)2 complex was studied using DFT to determine the thermodynamics associated with the electrocatalytic formation of H2(g). From the calculated thermodynamics, it appears that the Ni(SeNHC2(CN)2)2 complex is predicted to catalyze the production of H2 gas under mildly reducing conditions relative to the SHE. Notably, the thermodynamics are better than the values calculated for the analogous Ni(SNHC2(CN)2)2 complex which has been shown experimentally to catalyze the formation of H2 gas in aqueous solution. Regarding possible kinetic reactivity, the HOMO-LUMO gap energies were calculated. From the gap energies, it is expected that the Se-containing compounds would be more reactive to electron transfer in the third reduction step, meaning therefore that a smaller overpotential would be needed to drive the reduction of Red2-H2 relative to SRed2-H2 in agreement with past experimental work. Thus, the use of Se in such compounds may offer a means to improve the catalysts for H2 production.
Collapse
Affiliation(s)
- Kelly P Abad
- Department of Chemistry , Brandon University , 270-18th Street , Brandon , Manitoba R7A 6A9 , Canada
| | - Eric A C Bushnell
- Department of Chemistry , Brandon University , 270-18th Street , Brandon , Manitoba R7A 6A9 , Canada
| |
Collapse
|
5
|
Boychuk BT, Bushnell EA. A computational investigation into nickel-bis(diselenolene) complexes as potential catalysts for reduction of H+ to H2. CAN J CHEM 2018. [DOI: 10.1139/cjc-2017-0565] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
As a result of burning fossil fuels, levels of greenhouse gases in our atmosphere are increasing at an alarming rate. Such an increase in greenhouse gases threatens our planet due to global climate change. To reduce the production of greenhouse gases, we must switch from fossil fuels to alternative fuels for energy. The most viable alternative energy source involves the conversion of solar energy into chemical energy via the photocatalytic splitting of water to form molecular hydrogen. In the present work, the Ni-bis(1,2-diamine-diselenolene) and Ni-bis(1,2-dicyano-diselenolene) complexes were studied using density functional theory (DFT). From the results, it was found that the 1,2-diamine-diselenolene and 1,2-dicyano-diselenolene nickel complexes catalyze the formation of H2(g) with overall reaction Gibbs energies of +8.7 kJ mol–1 and +8.4 kJ mol–1, respectively, in a dilute aqueous environment versus the standard hydrogen electrode (SHE). Although both are able to catalyze the HER through a marginally endergonic reaction, the most thermodynamically favourable pathways differed between the complexes. In particular, the most thermodynamically favourable pathway for the formation of H2 by CNOx involves an EECC mechanism, whereas for NH2Ox, the most thermodynamically favourable pathway occurs via an ECCE mechanism. From the results presented, the choice of substituent on the alkene backbone significantly affects the reduction potential and reaction Gibbs energies of protonation. The considerably more positive reduction potential for the CN complexes may offer a solution to the problems experimentally observed for the production of H2.
Collapse
Affiliation(s)
- Briana T.A. Boychuk
- Department of Chemistry, Brandon University, 270 18th Street, Brandon, MB R7A 6A9, Canada
- Department of Chemistry, Brandon University, 270 18th Street, Brandon, MB R7A 6A9, Canada
| | - Eric A.C. Bushnell
- Department of Chemistry, Brandon University, 270 18th Street, Brandon, MB R7A 6A9, Canada
- Department of Chemistry, Brandon University, 270 18th Street, Brandon, MB R7A 6A9, Canada
| |
Collapse
|
6
|
Schlimgen AW, Mazziotti DA. Static and Dynamic Electron Correlation in the Ligand Noninnocent Oxidation of Nickel Dithiolates. J Phys Chem A 2017; 121:9377-9384. [DOI: 10.1021/acs.jpca.7b09567] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Anthony W. Schlimgen
- Department of Chemistry and
the James Franck Institute, The University of Chicago, Chicago, Illinois 60637, United States
| | - David A. Mazziotti
- Department of Chemistry and
the James Franck Institute, The University of Chicago, Chicago, Illinois 60637, United States
| |
Collapse
|
7
|
Bushnell EA. A computational investigation into the catalytic activity of a diselenolene sulfite oxidase biomimetic complex. CAN J CHEM 2016. [DOI: 10.1139/cjc-2016-0244] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Molybdenum is the only 4d metal found in almost all life. One such molybdenum-containing enzyme is sulfite oxidase, which also contains the dithiolene-molybdopterin ligand. Sulfite oxidase is essential in the degradation of sulfur-containing compounds such as cysteine and methionine. Past work has shown parallels in the chemistry of dithiolene–metal and diselenolene–metal complexes. Thus, in this present work, the oxygen atom transfer mechanism for a diselenolene sulfite oxidase biomimetic complex was investigated using computational tools, the results of which were compared to the analogous dithiolene biomimetic complex. From the results obtained, the molybdenum-diselenolene sulfite oxidase biomimetic complex is able to catalyse the oxygen atom transfer and does so with a marginally lower value of ΔrG‡ than that for the analogous dithiolene complex. In particular, it was found that on average, the diselenolene complex had an activation energy 1.2 kJ mol–1 lower in energy than the analogous dithiolene complex. However, the calculated value of ΔrG suggests that the oxidation of sulfite is more favourable for the dithiolene complex where the average difference in reaction aqueous Gibbs reaction energy was –9.4 kJ mol–1 relative to the diselenolene complex. It is noted that with the use of D3 and D3BJ corrections in combination with the B3LYP functional, the barrier for oxygen atom transfer is lowered by more than 30.0 kJ mol–1 for both the diselenolene and dithiolene complexes. Such results suggest that to study such oxo-transfer reactions, the proper treatment of dispersion interaction is necessary.
Collapse
Affiliation(s)
- Eric A.C. Bushnell
- Department of Chemistry, Brandon University, 270-18th Street, Brandon, MB R7A 6A9, Canada
- Department of Chemistry, Brandon University, 270-18th Street, Brandon, MB R7A 6A9, Canada
| |
Collapse
|
8
|
Thapa B, Schlegel HB. Theoretical Calculation of pKa’s of Selenols in Aqueous Solution Using an Implicit Solvation Model and Explicit Water Molecules. J Phys Chem A 2016; 120:8916-8922. [DOI: 10.1021/acs.jpca.6b09520] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Bishnu Thapa
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - H. Bernhard Schlegel
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| |
Collapse
|
9
|
Yamaguchi M, Shida T. Prototype Dithiolene Radical Anion (S═CH-CH═S(•-)) As Derived from Electron Attachment to 1,4-Dithiane: Experimental and Computational Studies on Electronic Structure. J Phys Chem A 2016; 120:3570-7. [PMID: 27135709 DOI: 10.1021/acs.jpca.6b03424] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The prototype dithiolene (ethane-1,2-dithione; dithioglyoxal) constitutes the core component of metal-dithiolene complexes whose studies have burgeoned during the past half of a century in interdisciplinary research fields ranging from material sciences to enzymology. The recent vigorous research activity owes much to the works in the incubating period of the 1960s. However, due to the extreme reactivity of dithiolenes, basic studies on their electronic structure are conspicuously meager. In this paper, we report the electronic absorption spectrum of the radical anion in the title together with quantum chemical analyses on its electronic structure and the molecular geometry. As a result, the experimental result is consistently accounted for. We expect the results to be helpful for further understanding the electronic structure and reactivity of metal-dithiolene complexes.
Collapse
Affiliation(s)
- Makoto Yamaguchi
- Department of Chemistry, Faculty of Science, Kyoto University , Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto 606-8502, Japan.,Department of Environmental and Energy Chemistry, Faculty of Engineering, Kogakuin University , 1-24-2 Nishi-shinjuku, Shinjuku-ku, Tokyo 163-8677, Japan
| | - Tadamasa Shida
- Department of Chemistry, Faculty of Science, Kyoto University , Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto 606-8502, Japan
| |
Collapse
|
10
|
Bushnell EAC, Boyd RJ. Assessment of Several DFT Functionals in Calculation of the Reduction Potentials for Ni–, Pd–, and Pt–Bis-ethylene-1,2-dithiolene and -Diselenolene Complexes. J Phys Chem A 2015; 119:911-8. [DOI: 10.1021/jp511350z] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Eric A. C. Bushnell
- Department
of Chemistry, Dalhousie University, Halifax, Nova Scotia B3H
4R2, Canada
| | - Russell J. Boyd
- Department
of Chemistry, Dalhousie University, Halifax, Nova Scotia B3H
4R2, Canada
| |
Collapse
|