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Computational Approaches to the Electronic Properties of Noble Metal Nanoclusters Protected by Organic Ligands. NANOMATERIALS 2021; 11:nano11092409. [PMID: 34578725 PMCID: PMC8468547 DOI: 10.3390/nano11092409] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Revised: 09/06/2021] [Accepted: 09/09/2021] [Indexed: 11/17/2022]
Abstract
Organometallic nanoparticles composed by metal cores with sizes under two nanometers covered with organic capping ligands exhibit intermediate properties between those of atoms and molecules on one side, and those of larger metal nanoparticles on the other. In fact, these particles do not show a peculiar metallic behavior, characterized by plasmon resonances, but instead they have nonvanishing band-gaps, more along molecular optical properties. As a consequence, they are suitable to be described and investigated by computational approaches such as those used in quantum chemistry, for instance those based on the time-dependent density functional theory (TD-DFT). Here, I present a short review of the research performed from 2014 onward at the University of Modena and Reggio Emilia (Italy) on the TD-DFT interpretation of the electronic spectra of different organic-protected gold and/or silver nanoclusters.
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2
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McKay J, Cowan MJ, Morales-Rivera CA, Mpourmpakis G. Predicting ligand removal energetics in thiolate-protected nanoclusters from molecular complexes. NANOSCALE 2021; 13:2034-2043. [PMID: 33449990 DOI: 10.1039/d0nr07839e] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Thiolate-protected metal nanoclusters (TPNCs) have attracted great interest in the last few decades due to their high stability, atomically precise structure, and compelling physicochemical properties. Among their various applications, TPNCs exhibit excellent catalytic activity for numerous reactions; however, recent work revealed that these systems must undergo partial ligand removal in order to generate active sites. Despite the importance of ligand removal in both catalysis and stability of TPNCs, the role of ligands and metal type in the process is not well understood. Herein, we utilize Density Functional Theory to understand the energetic interplay between metal-sulfur and sulfur-ligand bond dissociation in metal-thiolate systems. We first probe 66 metal-thiolate molecular complexes across combinations of M = Ag, Au, and Cu with twenty-two different ligands (R). Our results reveal that the energetics to break the metal-sulfur and sulfur-ligand bonds are strongly correlated and can be connected across all complexes through metal atomic ionization potentials. We then extend our work to the experimentally relevant [M25(SR)18]- TPNC, revealing the same correlations at the nanocluster level. Importantly, we unify our work by introducing a simple methodology to predict TPNC ligand removal energetics solely from calculations performed on metal-ligand molecular complexes. Finally, a computational mechanistic study was performed to investigate the hydrogenation pathways for SCH3-based complexes. The energy barriers for these systems revealed, in addition to thermodynamics, that kinetics favor the break of S-R over the M-S bond in the case of the Au complex. Our computational results rationalize several experimental observations pertinent to ligand effects on TPNCs. Overall, our introduced model provides an accelerated path to predict TPNC ligand removal energies, thus aiding towards targeted design of TPNC catalysts.
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Affiliation(s)
- Julia McKay
- Department of Chemical and Petroleum Engineering, University of Pittsburgh, Pittsburgh, PA 15261, USA.
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3
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Machado ES, Rodrigues NM, Costa Júnior NB, Felicíssimo VC. DFT/TDDFT investigation on the structural and optical properties of Au13L clusters. Theor Chem Acc 2020. [DOI: 10.1007/s00214-020-02587-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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4
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Muniz-Miranda F, Minei P, Contiero L, Labat F, Ciofini I, Adamo C, Bellina F, Pucci A. Aggregation Effects on Pigment Coatings: Pigment Red 179 as a Case Study. ACS OMEGA 2019; 4:20315-20323. [PMID: 31815234 PMCID: PMC6893955 DOI: 10.1021/acsomega.9b02819] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2019] [Accepted: 11/04/2019] [Indexed: 06/06/2023]
Abstract
Here, we have studied, with a combined experimental and computational approach, the effect of the crystal environment and aggregation on the electronic properties of Pigment Red 179, which affect both its color and optical energy gap. Spectra acquired in the near-infrared and visible range of energies suggest that this molecule is indeed a "cool" dye, which can be employed as a red pigment that provides effective color coverage to different substrates without contributing to their heating during light irradiation. Spectra acquired on different polymer mixtures at different pigment concentrations (i.e., 2.5-10 wt %) suggest that absorption features depend on chromophoric arrangements promoted by the strong intermolecular π-π interactions. Calculations, performed at the time-dependent density functional theory level, allowed to both attribute the nature of the electronic transitions causing the observed spectra involved and understand the effect of the environment. Indeed, the visible spectra of the pigment is dominated by two localized transitions, with negligible charge transfer for both a dye monomer and dimer either in vacuum or acetonitrile solution. Instead, models including the crystal environment of the pigment show the presence of a high-wavelength S1 ← S0 charge transfer transition between two adjacent molecules, in quantitative agreement with the experimental absorption energy of the crystal pigment.
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Affiliation(s)
- Francesco Muniz-Miranda
- École
Nationale Supérieure de Chimie de Paris and PSL Research University,
CNRS, Institute of Chemistry for Life and Health Sciences (i-CLeHS),
FRE 2027, 11, rue Pierre et Marie Curie, F-75005 Paris, France
| | - Pierpaolo Minei
- Deparment
of Chemistry and Industrial Chemistry, University
of Pisa, Via Giuseppe Moruzzi 13, 56124 Pisa, Italy
| | - Luca Contiero
- Cromology
Italia S.P.A., Via 4
Novembre 4, 55016 Porcari, Lucca, Italy
| | - Frédéric Labat
- École
Nationale Supérieure de Chimie de Paris and PSL Research University,
CNRS, Institute of Chemistry for Life and Health Sciences (i-CLeHS),
FRE 2027, 11, rue Pierre et Marie Curie, F-75005 Paris, France
| | - Ilaria Ciofini
- École
Nationale Supérieure de Chimie de Paris and PSL Research University,
CNRS, Institute of Chemistry for Life and Health Sciences (i-CLeHS),
FRE 2027, 11, rue Pierre et Marie Curie, F-75005 Paris, France
| | - Carlo Adamo
- École
Nationale Supérieure de Chimie de Paris and PSL Research University,
CNRS, Institute of Chemistry for Life and Health Sciences (i-CLeHS),
FRE 2027, 11, rue Pierre et Marie Curie, F-75005 Paris, France
| | - Fabio Bellina
- Deparment
of Chemistry and Industrial Chemistry, University
of Pisa, Via Giuseppe Moruzzi 13, 56124 Pisa, Italy
| | - Andrea Pucci
- Deparment
of Chemistry and Industrial Chemistry, University
of Pisa, Via Giuseppe Moruzzi 13, 56124 Pisa, Italy
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Weng S, Lv Y, Yu H, Zhu M. The Ligand-Exchange Reactions of Rod-Like Au 25-n M n (M=Au, Ag, Cu, Pd, Pt) Nanoclusters with Cysteine - A Density Functional Theory Study. Chemphyschem 2019; 20:1822-1829. [PMID: 31070285 DOI: 10.1002/cphc.201900439] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Revised: 05/08/2019] [Indexed: 11/06/2022]
Abstract
The atomic precision of ultrasmall noble-metal nanoclusters (NMNs) is fundamental for elucidating structure-property relationships and probing their practical applications. So far, the atomic structure of NMNs protected by organic ligands has been widely elucidated, whereas the precise atomic structure of NMNs protected by water-soluble ligands (such as peptides and nucleic acid), has been rarely reported. With the concept of "precision to precision", density functional theory (DFT) calculations were performed to probe the thermodynamic plausibility and inherent determinants for synthesizing atomically precise, water-soluble NMNs via the framework-maintained two-phase ligand-exchange method. A series of rod-like Au25-n Mn (M=Au, Ag, Cu, Pd, Pt) NMNs with the same framework but varied ligands and metal compositions was chosen as the modeling reactants, and cysteine was used as the modeling water-soluble ligand. It was found that the acidity of the reaction remarkably affects the thermodynamic facility of the ligand exchange reactions. Ligand effects (structural distortion and acidity) dominate the overall thermodynamic facility of the ligand-exchange reaction, while the number and type of doped metal atom(s) has little influence.
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Affiliation(s)
- Shiyin Weng
- Department of Chemistry and Centre for Atomic Engineering of Advanced Materials, Anhui Province Key Laboratory of Chemistry for Inorganic/Organic Hybrid Functionalized Materials, Anhui University, Hefei, Anhui, 230601, China
| | - Ying Lv
- Department of Chemistry and Centre for Atomic Engineering of Advanced Materials, Anhui Province Key Laboratory of Chemistry for Inorganic/Organic Hybrid Functionalized Materials, Anhui University, Hefei, Anhui, 230601, China
| | - Haizhu Yu
- Department of Chemistry and Centre for Atomic Engineering of Advanced Materials, Anhui Province Key Laboratory of Chemistry for Inorganic/Organic Hybrid Functionalized Materials, Anhui University, Hefei, Anhui, 230601, China.,Institute of Physical Science and Information Technology, Anhui University, Hefei, Anhui, 230601, China
| | - Manzhou Zhu
- Department of Chemistry and Centre for Atomic Engineering of Advanced Materials, Anhui Province Key Laboratory of Chemistry for Inorganic/Organic Hybrid Functionalized Materials, Anhui University, Hefei, Anhui, 230601, China.,Institute of Physical Science and Information Technology, Anhui University, Hefei, Anhui, 230601, China
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6
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Golosnaya MN, Pichugina DA, Kuz’menko NE. Structure and reactivity of gold cluster protected by triphosphine ligands: DFT study. Struct Chem 2019. [DOI: 10.1007/s11224-019-01292-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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7
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Latouche C, Skouteris D, Palazzetti F, Barone V. TD-DFT Benchmark on Inorganic Pt(II) and Ir(III) Complexes. J Chem Theory Comput 2016; 11:3281-9. [PMID: 26575764 DOI: 10.1021/acs.jctc.5b00257] [Citation(s) in RCA: 87] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
We report in the present paper a comprehensive investigation of representative Pt(II) and Ir(III) complexes with special reference to their one-photon absorption spectra employing methods rooted in density functional theory and its time dependent extension. We have compared nine different functionals ranging from generalized gradient approximation (GGA) to global or range-separated hybrids, and two different basis sets, including pseudopotentials for 4 iridium and 7 platinum complexes. It turns out that hybrid functionals with the same exchange part give comparable results irrespective of the specific correlation functional (i.e., B3LYP is very close to B3PW91 and PBE0 is very close to MPW1PW91). More recent functionals, such as CAM-B3LYP and M06-2X, overestimate excitation energies, whereas local functionals (BP86 -GGA-, M06-L -Meta GGA-) strongly underestimate transition energies with respect to experimental results. As expected, basis set effects are weak, and the use of a triple-ζ polarized (def2-TZVP) basis set does not significantly improve the computed excitation energies with respect to a classical double-ζ basis set (LANL2DZ) augmented by polarization functions, but it significantly raises the computational effort.
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Affiliation(s)
- Camille Latouche
- Scuola Normale Superiore , Piazza dei Cavalieri 7, 56126 Pisa, Italy
| | | | | | - Vincenzo Barone
- Scuola Normale Superiore , Piazza dei Cavalieri 7, 56126 Pisa, Italy
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8
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Yao H, Iwatsu M. Water-Soluble Phosphine-Protected Au₁₁ Clusters: Synthesis, Electronic Structure, and Chiral Phase Transfer in a Synergistic Fashion. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2016; 32:3284-93. [PMID: 26986535 DOI: 10.1021/acs.langmuir.6b00539] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Synthesis of atomically precise, water-soluble phosphine-protected gold clusters is still currently limited probably due to a stability issue. We here present the synthesis, magic-number isolation, and exploration of the electronic structures as well as the asymmetric conversion of triphenylphosphine monosulfonate (TPPS)-protected gold clusters. Electrospray ionization mass spectrometry and elemental analysis result in the primary formation of Au11(TPPS)9Cl undecagold cluster compound. Magnetic circular dichroism (MCD) spectroscopy clarifies that extremely weak transitions are present in the low-energy region unresolved in the UV-vis absorption, which can be due to the Faraday B-terms based on the magnetically allowed transitions in the cluster. Asymmetric conversion without changing the nuclearity is remarkable by the chiral phase transfer in a synergistic fashion, which yields a rather small anisotropy factor (g-factor) of at most (2.5-7.0) × 10(-5). Quantum chemical calculations for model undecagold cluster compounds are then used to evaluate the optical and chiroptical responses induced by the chiral phase transfer. On this basis, we find that the Au core distortion is ignorable, and the chiral ion-pairing causes a slight increase in the CD response of the Au11 cluster.
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Affiliation(s)
- Hiroshi Yao
- Graduate School of Material Science, University of Hyogo , 3-2-1 Koto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
| | - Mana Iwatsu
- Graduate School of Material Science, University of Hyogo , 3-2-1 Koto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
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9
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Muniz-Miranda F, Menziani MC, Pedone A. Assessment of the basis set effect on the structural and electronic properties of organic-protected gold nanoclusters. Theor Chem Acc 2016. [DOI: 10.1007/s00214-016-1856-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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10
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Azarias C, Adamo C, Perrier A. Modeling the photosensitizing properties of thiolate-protected gold nanoclusters. Phys Chem Chem Phys 2016; 18:7737-50. [DOI: 10.1039/c5cp08051g] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
An accurate computational strategy for studying the structural, redox and optical properties of thiolated gold nanoclusters (GNCs) using (time-dependent) density functional theory is proposed.
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Affiliation(s)
- Cloé Azarias
- Chimie ParisTech
- PSL Research University
- CNRS
- Institut de Recherche de Chimie Paris (IRCP)
- F-75005 Paris
| | - Carlo Adamo
- Chimie ParisTech
- PSL Research University
- CNRS
- Institut de Recherche de Chimie Paris (IRCP)
- F-75005 Paris
| | - Aurélie Perrier
- Chimie ParisTech
- PSL Research University
- CNRS
- Institut de Recherche de Chimie Paris (IRCP)
- F-75005 Paris
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11
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Li Q, Wang S, Kirschbaum K, Lambright KJ, Das A, Jin R. Heavily doped Au25–xAgx(SC6H11)18− nanoclusters: silver goes from the core to the surface. Chem Commun (Camb) 2016; 52:5194-7. [DOI: 10.1039/c6cc01243d] [Citation(s) in RCA: 89] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The Au25(SR)18 nanocluster (where R = c-C6H11) can be heavily doped with silver through Ag(i)–thiolate complex induced size/structure transformation of Au23(SR)16− into Au25–xAgx(SR)18−.
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Affiliation(s)
- Qi Li
- Department of Chemistry
- Carnegie Mellon University
- Pittsburgh
- USA
| | - Shuxin Wang
- Department of Chemistry
- Carnegie Mellon University
- Pittsburgh
- USA
| | - Kristin Kirschbaum
- College of Natural Sciences and Mathematics
- University of Toledo
- Toledo
- USA
| | - Kelly J. Lambright
- College of Natural Sciences and Mathematics
- University of Toledo
- Toledo
- USA
| | - Anindita Das
- Department of Chemistry
- Carnegie Mellon University
- Pittsburgh
- USA
| | - Rongchao Jin
- Department of Chemistry
- Carnegie Mellon University
- Pittsburgh
- USA
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12
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Muniz-Miranda F, Presti D, Menziani MC, Pedone A. Electronic and optical properties of the Au22[1,8-bis(diphenylphosphino) octane]6 nanoclusters disclosed by DFT and TD-DFT calculations. Theor Chem Acc 2015. [DOI: 10.1007/s00214-015-1764-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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13
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Muniz-Miranda F, Pedone A, Battistelli G, Montalti M, Bloino J, Barone V. Benchmarking TD-DFT against Vibrationally Resolved Absorption Spectra at Room Temperature: 7-Aminocoumarins as Test Cases. J Chem Theory Comput 2015; 11:5371-84. [DOI: 10.1021/acs.jctc.5b00750] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Francesco Muniz-Miranda
- Dipartimento
di Scienze Chimiche e Geologiche, Università di Modena e Reggio Emilia, via G. Campi 183, Modena, 41125, Italy
| | - Alfonso Pedone
- Dipartimento
di Scienze Chimiche e Geologiche, Università di Modena e Reggio Emilia, via G. Campi 183, Modena, 41125, Italy
| | - Giulia Battistelli
- Dipartimento
“G. Ciamician”, Università di Bologna, Bologna, 40126, Italy
| | - Marco Montalti
- Dipartimento
“G. Ciamician”, Università di Bologna, Bologna, 40126, Italy
| | - Julien Bloino
- Consiglio Nazionale delle Ricerche, Istituto di Chimica dei Composti OrganoMetallici (ICCOM-CNR), UOS di Pisa, Area della Ricerca, via G. Moruzzi 1, Pisa, 56124, Italy
- Scuola Normale Superiore di Pisa, Piazza dei Cavalieri 7, Pisa, 56126, Italy
| | - Vincenzo Barone
- Scuola Normale Superiore di Pisa, Piazza dei Cavalieri 7, Pisa, 56126, Italy
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14
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Muniz-Miranda F, Menziani MC, Pedone A. DFT and TD-DFT Assessment of the Structural and Optoelectronic Properties of an Organic–Ag14 Nanocluster. J Phys Chem A 2014; 119:5088-98. [DOI: 10.1021/jp507679f] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Francesco Muniz-Miranda
- Department
of Chemical and
Geological Sciences (DSCG), University of Modena and Reggio Emilia (UniMoRE), Via G. Campi 183, I-41125, Modena, Italy
| | - Maria Cristina Menziani
- Department
of Chemical and
Geological Sciences (DSCG), University of Modena and Reggio Emilia (UniMoRE), Via G. Campi 183, I-41125, Modena, Italy
| | - Alfonso Pedone
- Department
of Chemical and
Geological Sciences (DSCG), University of Modena and Reggio Emilia (UniMoRE), Via G. Campi 183, I-41125, Modena, Italy
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