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Optical Spectra of Oligofurans: A Theoretical Approach to the Transition Energies, Reorganization Energies, and the Vibronic Activity. Molecules 2021; 26:molecules26237163. [PMID: 34885747 PMCID: PMC8659192 DOI: 10.3390/molecules26237163] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2021] [Revised: 11/18/2021] [Accepted: 11/22/2021] [Indexed: 11/17/2022] Open
Abstract
There is experimental evidence of high vibronic activity that accompanies the allowed transition between the ground state and the lowest electronic singlet excited state of oligofurans that contain two, three, and four furan rings. The absorption and emission spectra of the three lowest oligofurans measured at liquid nitrogen temperature show distinct fine structures that are reproduced using the projection-based model of vibronic coupling (with Dushinsky rotation included) parameterized utilizing either Density Functional Theory (DFT, with several different exchange-correlation functionals) or ab initio (CC2) quantum chemistry calculations. Using as a reference the experimental data concerning the electronic absorption and fluorescence for the eight lowest oligofurans, we first analyzed the performance of the exchange-correlation functionals for the electronic transition energies and the reorganization energies. Subsequently, we used the best functionals alongside with the CC2 method to explore how the reorganization energies are distributed among the totally symmetric vibrations, identify the normal modes that dominate in the fine structures present in the absorption and emission bands, and trace their evolution with the increasing number of rings in the oligofuran series. Confrontation of the simulated spectra with the experiment allows for the verification of the performance of the selected DFT functionals and the CC2 method.
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Szczepanik DW, Solà M. Electron Delocalization in Planar Metallacycles: Hückel or Möbius Aromatic? ChemistryOpen 2019; 8:219-227. [PMID: 30828509 PMCID: PMC6382291 DOI: 10.1002/open.201900014] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2019] [Revised: 02/01/2019] [Indexed: 11/09/2022] Open
Abstract
In this work the relationship between the formal number of π-electrons, d-orbital conjugation topology, π-electron delocalization and aromaticity in d-block metallacycles is investigated in the context of recent findings concerning the correlation of π-HOMO topology and the magnetic aromaticity indices in these species. It is demonstrated that for π-electron rich d-metallacycles the direct link between aromaticity, the number of π-electrons and the frontier π-orbital topology does not strictly hold and for such systems it is very difficult to unambiguously associate their aromaticity with the "4n+2" (Hückel) and "4n" (Möbius) rules. It is also shown that the recently proposed electron density of delocalized bonds (EDDB) method can successfully be used not only to quantify and visualize aromaticity in such difficult cases, but also - in contrast to magnetic aromaticity descriptors - to provide a great deal of information on the real role of d-orbitals in metallacycles without the ambiguity of bookkeeping of electrons in the π-subsystem of the molecular ring. Interestingly, some of the metallacycles studied cannot be classified exclusively as Hückel or Möbius because they have a hybrid Hückel-Möbius or even quasi-aromatic nature.
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Affiliation(s)
- Dariusz W. Szczepanik
- Institut de Quìmica Computacional i Catàlisi and Departament de QuímicaUniversitat de Girona, C/ Maria Aurèlia Capmany, 6917003Girona, CataloniaSpain
- K. Guminski Department of Theoretical Chemistry Faculty of ChemistryJagiellonian UniversityGronostajowa, 230-387KrakówPoland.
| | - Miquel Solà
- Institut de Quìmica Computacional i Catàlisi and Departament de QuímicaUniversitat de Girona, C/ Maria Aurèlia Capmany, 6917003Girona, CataloniaSpain
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Kolek P, Andrzejak M, Hakalla R, Szajna W. Quantitatively Adequate Calculations of the H-Chelate Ring Distortion upon the S0 → S1(ππ*) Excitation in Internally H-Bonded o-Anthranilic Acid: CC2 Coupled-Cluster versus TDDFT. J Phys Chem A 2018; 122:6243-6255. [DOI: 10.1021/acs.jpca.8b04973] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Przemysław Kolek
- Department of Experimental Physics, Faculty of Mathematics and Natural Sciences, University of Rzeszów, 1 Pigonia Street, PL-35-310 Rzeszów, Poland
| | - Marcin Andrzejak
- K. Gumiński Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Krakόw, 30-060, Poland
| | - Rafał Hakalla
- Department of Experimental Physics, Faculty of Mathematics and Natural Sciences, University of Rzeszów, 1 Pigonia Street, PL-35-310 Rzeszów, Poland
| | - Wojciech Szajna
- Department of Experimental Physics, Faculty of Mathematics and Natural Sciences, University of Rzeszów, 1 Pigonia Street, PL-35-310 Rzeszów, Poland
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Szczepanik DW, Solà M, Krygowski TM, Szatylowicz H, Andrzejak M, Pawełek B, Dominikowska J, Kukułka M, Dyduch K. Aromaticity of acenes: the model of migrating π-circuits. Phys Chem Chem Phys 2018; 20:13430-13436. [PMID: 29722388 DOI: 10.1039/c8cp01108g] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this work we extend the concept of migrating Clar's sextets to explain local aromaticity trends in linear acenes predicted by theoretical calculations and experimental data. To assess the link between resonance and reactivity and to rationalize the constant-height AFM image of pentacene we used the electron density of delocalized bonds and other functions of the one-electron density from conceptual density functional theory. The presented results provide evidence for migration of Clar's π-sextets and larger circuits in these systems, and clearly show that the link between the theoretical concept of aromaticity and the real electronic structure entails the separation of intra- and inter-ring resonance effects, which in the case of [n]acenes (n = 3, 4, 5) comes down to solving a system of simple linear equations.
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Affiliation(s)
- Dariusz W Szczepanik
- K. Gumiński Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland.
| | - Miquel Solà
- Institut de Quìmica Computacional i Catàlisi, Universitat de Girona, C/Maria Aurèlia Capmany, 69, 17003 Girona, Catalonia, Spain
| | - Tadeusz M Krygowski
- Department of Chemistry, University of Warsaw, Pasteura 1, 02-093 Warszawa, Poland
| | - Halina Szatylowicz
- Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664 Warszawa, Poland
| | - Marcin Andrzejak
- K. Gumiński Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland.
| | - Barbara Pawełek
- Department of Plant Cytology and Embryology, Institute of Botany, Jagiellonian University, Gronostajowa 9, 30-387 Kraków, Poland
| | - Justyna Dominikowska
- Theoretical and Structural Chemistry Group, Faculty of Chemistry, University of Lodz, Pomorska 163/165, 90-236 Łódź, Poland
| | - Mercedes Kukułka
- K. Gumiński Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland.
| | - Karol Dyduch
- K. Gumiński Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland.
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Szczepanik DW, Andrzejak M, Dominikowska J, Pawełek B, Krygowski TM, Szatylowicz H, Solà M. The electron density of delocalized bonds (EDDB) applied for quantifying aromaticity. Phys Chem Chem Phys 2018; 19:28970-28981. [PMID: 29063082 DOI: 10.1039/c7cp06114e] [Citation(s) in RCA: 89] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
In this study the recently developed electron density of delocalized bonds (EDDB) is used to define a new measure of aromaticity in molecular rings. The relationships between bond-length alternation, electron delocalization and diatropicity of the induced ring current are investigated for a test set of representative molecular rings by means of correlation and principal component analyses involving the most popular aromaticity descriptors based on structural, electronic, and magnetic criteria. Additionally, a qualitative comparison is made between EDDB and the magnetically induced ring-current density maps from the ipsocentric approach for a series of linear acenes. Special emphasis is given to the comparative study of the description of cyclic delocalization of electrons in a wide range of organic aromatics in terms of the kekulean multicenter index KMCI and the newly proposed EDDBk index.
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Affiliation(s)
- Dariusz W Szczepanik
- K. Gumiński Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland.
| | - Marcin Andrzejak
- K. Gumiński Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland.
| | - Justyna Dominikowska
- Department of Theoretical and Structural Chemistry, Faculty of Chemistry, University of Lodz, Pomorska 163/165, 90-236 Łódź, Poland
| | - Barbara Pawełek
- Department of Plant Cytology and Embryology, Institute of Botany, Jagiellonian University, Gronostajowa 9, 30-387 Cracow, Poland
| | - Tadeusz M Krygowski
- Department of Chemistry, University of Warsaw, Pasteura 1, 02-093 Warszawa, Poland
| | - Halina Szatylowicz
- Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664 Warszawa, Poland
| | - Miquel Solà
- Institut de Quìmica Computacional i Catàlisi, Universitat de Girona, C/Maria Aurelia Capmany, 69, 17003 Girona, Catalonia, Spain
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Andrzejak M, Petelenz P. Vibronic relaxation energies of acene-related molecules upon excitation or ionization. Phys Chem Chem Phys 2018; 20:14061-14071. [DOI: 10.1039/c8cp01562g] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Effective-mode Franck–Condon parameters evaluation for excited state ionization from the corresponding excitation and ground-state ionization values leads to substantial errors.
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Affiliation(s)
- Marcin Andrzejak
- Department of Theoretical Chemistry
- Faculty of Chemistry
- Jagiellonian University
- 30-387 Krakow
- Poland
| | - Piotr Petelenz
- Department of Theoretical Chemistry
- Faculty of Chemistry
- Jagiellonian University
- 30-387 Krakow
- Poland
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Szczepanik DW, Solà M, Andrzejak M, Pawełek B, Dominikowska J, Kukułka M, Dyduch K, Krygowski TM, Szatylowicz H. The role of the long-range exchange corrections in the description of electron delocalization in aromatic species. J Comput Chem 2017; 38:1640-1654. [PMID: 28436535 DOI: 10.1002/jcc.24805] [Citation(s) in RCA: 59] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2017] [Revised: 03/22/2017] [Accepted: 03/23/2017] [Indexed: 01/07/2023]
Abstract
In this article, we address the role of the long-range exchange corrections in description of the cyclic delocalization of electrons in aromatic systems at the density functional theory level. A test set of diversified monocyclic and polycyclic aromatics is used in benchmark calculations involving various exchange-correlation functionals. A special emphasis is given to the problem of local aromaticity in acenes, which has been a subject of long-standing debate in the literature. The presented results indicate that the noncorrected exchange-correlation functionals significantly overestimate cyclic delocalization of electrons in heteroaromatics and aromatic systems with fused rings, which in the case of acenes leads to conflicting local aromaticity predictions from different criteria. © 2017 Wiley Periodicals, Inc.
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Affiliation(s)
- Dariusz W Szczepanik
- Faculty of Chemistry, K. Gumiński Department of Theoretical Chemistry, Jagiellonian University, Ingardena 3, Cracow, 30-060, Poland
| | - Miquel Solà
- Institut de Química Computational i Catàlisi, Universitat de Girona, Maria Aurèlia Capmany 6, Girona, 17003, Catalonia, Spain
| | - Marcin Andrzejak
- Faculty of Chemistry, K. Gumiński Department of Theoretical Chemistry, Jagiellonian University, Ingardena 3, Cracow, 30-060, Poland
| | - Barbara Pawełek
- Institute of Botany, Department of Plant Cytology and Embryology, Jagiellonian University, Gronostajowa 9, Cracow, 30-387, Poland
| | - Justyna Dominikowska
- Faculty of Chemistry, Department of Theoretical and Structural Chemistry, University of Lodz, Pomorska 163/165, Lodz, 90-236, Poland
| | - Mercedes Kukułka
- Faculty of Chemistry, K. Gumiński Department of Theoretical Chemistry, Jagiellonian University, Ingardena 3, Cracow, 30-060, Poland
| | - Karol Dyduch
- Faculty of Chemistry, K. Gumiński Department of Theoretical Chemistry, Jagiellonian University, Ingardena 3, Cracow, 30-060, Poland
| | - Tadeusz M Krygowski
- Faculty of Chemistry, Department of Theoretical Chemistry and Crystallography, University of Warsaw, Pasteura 1, Warsaw, 02-093, Poland
| | - Halina Szatylowicz
- Faculty of Chemistry, Department of Physical Chemistry, Warsaw University of Technology, Noakowskiego 3, Warsaw, 00-664, Poland
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Jacquemin D, Duchemin I, Blondel A, Blase X. Benchmark of Bethe-Salpeter for Triplet Excited-States. J Chem Theory Comput 2017; 13:767-783. [PMID: 28107000 DOI: 10.1021/acs.jctc.6b01169] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
We have evaluated the accuracy of the Bethe-Salpeter singlet-triplet transition energies as well as singlet-triplet and triplet-triplet splittings for 20 organic molecules, using as reference the CC3 values determined by Thiel and co-workers with both the TZVP and aug-cc-pVTZ atomic basis sets. Our excitation energies are obtained on the basis of GW quasiparticle energy levels that are self-consistently converged with respect to the starting DFT eigenvalues. In its current form, BSE/GW is often unable to provide a balanced description of both singlet and triplet excited-states. While the singlet-singlet and triplet-triplet energy separations are obtained accurately, triplets are located too close in energy from the ground-state, by typically -0.55 eV when using standard functionals to generate the starting eigenstates. Applying the Tamm-Dancoff approximation upshifts the BSE triplet energies and allows reducing this error to ca. -0.40 eV, while using M06-HF eigenstates allows a further increase and hence a reduction of the error for triplet states, but at the cost of larger errors for the singlet excited-states. At this stage, the most accurate TD-DFT estimates therefore remain competitive for computing singlet-triplet transition energies. Indeed, with M06-2X, irrespective of the application or not of the Tamm-Dancoff approximation and of the selected atomic basis set, the deviations obtained with TD-DFT are rather small.
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Affiliation(s)
- Denis Jacquemin
- Laboratoire CEISAM - UMR CNR 6230, Université de Nantes , 2 Rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France.,Institut Universitaire de France , 103 bd St. Michel, 75005 Paris Cedex 5, France
| | - Ivan Duchemin
- INAC, SP2M/L_Sim, CEA/UJF Cedex 09, 38054 Grenoble, France.,Institut NEEL, Université Grenoble Alpes , F-38042 Grenoble, France
| | - Aymeric Blondel
- Laboratoire CEISAM - UMR CNR 6230, Université de Nantes , 2 Rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France
| | - Xavier Blase
- Institut NEEL, Université Grenoble Alpes , F-38042 Grenoble, France.,CNRS, Institut NEEL, F-38042 Grenoble, France
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Szczepanik DW. On the three-center orbital projection formalism within the electron density of delocalized bonds method. COMPUT THEOR CHEM 2017. [DOI: 10.1016/j.comptc.2016.12.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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11
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Szczepanik DW. A new perspective on quantifying electron localization and delocalization in molecular systems. COMPUT THEOR CHEM 2016. [DOI: 10.1016/j.comptc.2016.02.003] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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