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Mondal S, Sadhukhan S, Sinha A, Hazra MK. Tropospheric Fate of Methylhydroxycarbene and the Ability of a Single Water Molecule to Efficiently Promote Its Isomerization into Acetaldehyde. J Am Chem Soc 2025; 147:211-222. [PMID: 39689346 PMCID: PMC11726554 DOI: 10.1021/jacs.4c08903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2024] [Revised: 11/26/2024] [Accepted: 11/27/2024] [Indexed: 12/19/2024]
Abstract
The ultraviolet (UV) photodissociation of pyruvic acid through the absorption of solar actinic flux generates methylhydroxycarbene (MHC) in the atmosphere. It is recognized that isolated MHC can undergo unimolecular isomerization to form acetaldehyde and vinyl alcohol. However, the rates and mechanism for its possible bimolecular reactions with atmospheric constituents, which can occur in parallel with its unimolecular reaction, is not well understood. Here we investigate the energetics, kinetics, and mechanism of the reaction of MHC with three ubiquitous atmospheric molecules N2, O2, and H2O over the 160 K-380 K temperature range. Our study, at the CCSD(T)/6-311++G(3df,3pd)//M06-2X/6-311++G(3df,3pd) level, reveals that the MHC + N2 encounter is nonreactive, while the MHC + O2 reaction, which leads to CH3CO + HO2 formation, has a rate that is significantly different from previous estimates. For the MHC + H2O reaction, we find that a single H2O molecule is very effective in catalyzing the isomerization of MHC to form predominantly acetaldehyde. An analysis of the computed rate for this reaction indicates that it will be an important source of tropospheric acetaldehyde ̵ a major pollutant and precursor for atmospheric reactive intermediates. Our findings are in sharp contrast to current assessments in the literature that the MHC + H2O reaction is minor. Furthermore, in the MHC + H2O reaction system, we find that due to the presence of the OH group on MHC, the concerted insertion mechanism, which is typically dominant in reactions involving singlet carbenes, is suppressed relative to a hydrogen bond mediated double hydrogen atom transfer mechanism.
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Affiliation(s)
- Soumen Mondal
- Chemical
Sciences Division, Saha Institute of Nuclear
Physics, 1/AF Bidhannagar, Kolkata 700064, India
- Homi
Bhabha National Institute, Training School Complex, Anushaktinagar, Mumbai 400094, India
| | - Saikat Sadhukhan
- Chemical
Sciences Division, Saha Institute of Nuclear
Physics, 1/AF Bidhannagar, Kolkata 700064, India
- Homi
Bhabha National Institute, Training School Complex, Anushaktinagar, Mumbai 400094, India
| | - Amitabha Sinha
- Department
of Chemistry and Biochemistry, University
of California–San Diego, La Jolla, California 92093, United States
| | - Montu K. Hazra
- Chemical
Sciences Division, Saha Institute of Nuclear
Physics, 1/AF Bidhannagar, Kolkata 700064, India
- Homi
Bhabha National Institute, Training School Complex, Anushaktinagar, Mumbai 400094, India
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2
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Non-conservation of activation energy barriers in the same chemical process: a cooperative (effect) proton transfer on (HF)n molecular aggregates. Theor Chem Acc 2020. [DOI: 10.1007/s00214-020-02681-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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3
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Tsallis C. Beyond Boltzmann-Gibbs-Shannon in Physics and Elsewhere. ENTROPY 2019; 21:e21070696. [PMID: 33267410 PMCID: PMC7515208 DOI: 10.3390/e21070696] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/17/2019] [Accepted: 06/28/2019] [Indexed: 01/15/2023]
Abstract
The pillars of contemporary theoretical physics are classical mechanics, Maxwell electromagnetism, relativity, quantum mechanics, and Boltzmann–Gibbs (BG) statistical mechanics –including its connection with thermodynamics. The BG theory describes amazingly well the thermal equilibrium of a plethora of so-called simple systems. However, BG statistical mechanics and its basic additive entropy SBG started, in recent decades, to exhibit failures or inadequacies in an increasing number of complex systems. The emergence of such intriguing features became apparent in quantum systems as well, such as black holes and other area-law-like scenarios for the von Neumann entropy. In a different arena, the efficiency of the Shannon entropy—as the BG functional is currently called in engineering and communication theory—started to be perceived as not necessarily optimal in the processing of images (e.g., medical ones) and time series (e.g., economic ones). Such is the case in the presence of generic long-range space correlations, long memory, sub-exponential sensitivity to the initial conditions (hence vanishing largest Lyapunov exponents), and similar features. Finally, we witnessed, during the last two decades, an explosion of asymptotically scale-free complex networks. This wide range of important systems eventually gave support, since 1988, to the generalization of the BG theory. Nonadditive entropies generalizing the BG one and their consequences have been introduced and intensively studied worldwide. The present review focuses on these concepts and their predictions, verifications, and applications in physics and elsewhere. Some selected examples (in quantum information, high- and low-energy physics, low-dimensional nonlinear dynamical systems, earthquakes, turbulence, long-range interacting systems, and scale-free networks) illustrate successful applications. The grounding thermodynamical framework is briefly described as well.
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Affiliation(s)
- Constantino Tsallis
- Centro Brasileiro de Pesquisas Físicas and National Institute of Science and Technology for Complex Systems–Rua Dr. Xavier Sigaud 150, Rio de Janeiro 22290-180, Brazil;
- Santa Fe Institute–1399 Hyde Park Road, Santa Fe, NM 87501, USA
- Complexity Science Hub Vienna–Josefstädter Strasse 39, 1080 Vienna, Austria
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Reed Harris AE, Cazaunau M, Gratien A, Pangui E, Doussin JF, Vaida V. Atmospheric Simulation Chamber Studies of the Gas-Phase Photolysis of Pyruvic Acid. J Phys Chem A 2017; 121:8348-8358. [DOI: 10.1021/acs.jpca.7b05139] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Allison E. Reed Harris
- Department
of Chemistry and Biochemistry, CIRES, University of Colorado, Boulder, Colorado 80309, United States
| | - Mathieu Cazaunau
- LISA,
UMR-CNRS 7583, Université Paris Est Créteil (UPEC), Université Paris Diderot (UPD), Institut Pierre Simon Laplace (IPSL), Créteil, France
| | - Aline Gratien
- LISA,
UMR-CNRS 7583, Université Paris Est Créteil (UPEC), Université Paris Diderot (UPD), Institut Pierre Simon Laplace (IPSL), Créteil, France
| | - Edouard Pangui
- LISA,
UMR-CNRS 7583, Université Paris Est Créteil (UPEC), Université Paris Diderot (UPD), Institut Pierre Simon Laplace (IPSL), Créteil, France
| | - Jean-François Doussin
- LISA,
UMR-CNRS 7583, Université Paris Est Créteil (UPEC), Université Paris Diderot (UPD), Institut Pierre Simon Laplace (IPSL), Créteil, France
| | - Veronica Vaida
- Department
of Chemistry and Biochemistry, CIRES, University of Colorado, Boulder, Colorado 80309, United States
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Aquilanti V, Coutinho ND, Carvalho-Silva VH. Kinetics of low-temperature transitions and a reaction rate theory from non-equilibrium distributions. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2017; 375:rsta.2016.0201. [PMID: 28320904 PMCID: PMC5360900 DOI: 10.1098/rsta.2016.0201] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 12/14/2016] [Indexed: 05/14/2023]
Abstract
This article surveys the empirical information which originated both by laboratory experiments and by computational simulations, and expands previous understanding of the rates of chemical processes in the low-temperature range, where deviations from linearity of Arrhenius plots were revealed. The phenomenological two-parameter Arrhenius equation requires improvement for applications where interpolation or extrapolations are demanded in various areas of modern science. Based on Tolman's theorem, the dependence of the reciprocal of the apparent activation energy as a function of reciprocal absolute temperature permits the introduction of a deviation parameter d covering uniformly a variety of rate processes, from those where quantum mechanical tunnelling is significant and d < 0, to those where d > 0, corresponding to the Pareto-Tsallis statistical weights: these generalize the Boltzmann-Gibbs weight, which is recovered for d = 0. It is shown here how the weights arise, relaxing the thermodynamic equilibrium limit, either for a binomial distribution if d > 0 or for a negative binomial distribution if d < 0, formally corresponding to Fermion-like or Boson-like statistics, respectively. The current status of the phenomenology is illustrated emphasizing case studies; specifically (i) the super-Arrhenius kinetics, where transport phenomena accelerate processes as the temperature increases; (ii) the sub-Arrhenius kinetics, where quantum mechanical tunnelling propitiates low-temperature reactivity; (iii) the anti-Arrhenius kinetics, where processes with no energetic obstacles are rate-limited by molecular reorientation requirements. Particular attention is given for case (i) to the treatment of diffusion and viscosity, for case (ii) to formulation of a transition rate theory for chemical kinetics including quantum mechanical tunnelling, and for case (iii) to the stereodirectional specificity of the dynamics of reactions strongly hindered by the increase of temperature.This article is part of the themed issue 'Theoretical and computational studies of non-equilibrium and non-statistical dynamics in the gas phase, in the condensed phase and at interfaces'.
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Affiliation(s)
- Vincenzo Aquilanti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, via Elce di Sotto 8, 06123 Perugia, Italy
- Instituto de Física, Universidade Federal da Bahia, 40210 Salvador, Brazil
- Istituto di Struttura della Materia, Consiglio Nazionale delle Ricerche, 00016 Rome, Italy
| | - Nayara Dantas Coutinho
- Instituto de Química, Universidade de Brasília, Caixa Postal 4478, 70904-970 Brasília, Brazil
| | - Valter Henrique Carvalho-Silva
- Grupo de Química Teórica e Estrutural de Anápolis, Campus de Ciências Exatas e Tecnológicas, Universidade Estadual de Goiás, CP 459, 75001-970 Anápolis, GO, Brazil
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Carvalho-Silva VH, Aquilanti V, de Oliveira HCB, Mundim KC. Deformed transition-state theory: Deviation from Arrhenius behavior and application to bimolecular hydrogen transfer reaction rates in the tunneling regime. J Comput Chem 2016; 38:178-188. [PMID: 27859380 DOI: 10.1002/jcc.24529] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2016] [Revised: 09/24/2016] [Accepted: 10/10/2016] [Indexed: 12/14/2022]
Abstract
A formulation is presented for the application of tools from quantum chemistry and transition-state theory to phenomenologically cover cases where reaction rates deviate from Arrhenius law at low temperatures. A parameter d is introduced to describe the deviation for the systems from reaching the thermodynamic limit and is identified as the linearizing coefficient in the dependence of the inverse activation energy with inverse temperature. Its physical meaning is given and when deviation can be ascribed to quantum mechanical tunneling its value is calculated explicitly. Here, a new derivation is given of the previously established relationship of the parameter d with features of the barrier in the potential energy surface. The proposed variant of transition state theory permits comparison with experiments and tests against alternative formulations. Prescriptions are provided and implemented to three hydrogen transfer reactions: CH4 + OH → CH3 + H2 O, CH3 Cl + OH → CH2 Cl + H2 O and H2 + CN → H + HCN, widely investigated both experimentally and theoretically. © 2016 Wiley Periodicals, Inc.
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Affiliation(s)
- Valter H Carvalho-Silva
- Grupo de Química Teórica e Estrutural de Anápolis, Unidade Universitária de Ciências Exatas e Tecnológicas, Universidade Estadual de Goiás, P.O. Box 459, 75001-970, Anápolis, GO, Brazil
| | - Vincenzo Aquilanti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Via Elce di Sotto 8, 06123, Perugia, Italy. Instituto de Física, Universidade Federal da Bahia, 40210, Salvador, Brazil.,Istituto di Struttura della Materia, Consiglio Nazionale delle Ricerche, 00016, Rome, Italy
| | - Heibbe C B de Oliveira
- Instituto de Química, Universidade de Brasília, Caixa Postal 4478, 70904-970, Brasília, Brazil
| | - Kleber C Mundim
- Instituto de Química, Universidade de Brasília, Caixa Postal 4478, 70904-970, Brasília, Brazil
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