Small-Molecule Fluorescent Probes for Binding- and Activity-Based Sensing of Redox-Active Biological Metals

Although transition metals constitute less than 0.1% of the total mass within a human body, they have a substantial impact on fundamental biological processes across all kingdoms of life. Indeed, these nutrients play crucial roles in the physiological functions of enzymes, with the redox properties of many of these metals being essential to their activity. At the same time, imbalances in transition metal pools can be detrimental to health. Modern analytical techniques are helping to illuminate the workings of metal homeostasis at a molecular and atomic level, their spatial localization in real time, and the implications of metal dysregulation in disease pathogenesis. Fluorescence microscopy has proven to be one of the most promising non-invasive methods for studying metal pools in biological samples. The accuracy and sensitivity of bioimaging experiments are predominantly determined by the fluorescent metal-responsive sensor, highlighting the importance of rational probe design for such measurements. This review covers activity- and binding-based fluorescent metal sensors that have been applied to cellular studies. We focus on the essential redox-active metals: iron, copper, manganese, cobalt, chromium, and nickel. We aim to encourage further targeted efforts in developing innovative approaches to understanding the biological chemistry of redox-active metals.

A Piperazine Linked Rhodamine-BODIPY FRET-based Fluorescent Sensor for Highly Selective Pd2+ and Biothiol Detection

A class of rhodamine-based fluorescent sensors for the selective and sensitive detection of Pd2+ metal ions in aqueous media has been developed. A rhodamine-based sensor PMS and a rhodamine-BODIPY Förster resonance energy transfer (FRET)-pair sensor PRS have been incorporated with a piperazine linker and an O-N-S-N podand ligand for specific recognition of Pd2+ ion. Both probes displayed colorimetric and fluorescent ratiometric changes when exposed to Pd2+ , due to their spirolactam rings opening and restoring rhodamine conjugation. PRS is highly selective to Pd2+ over 22 other metal ions, showing a 0.6-fold ratiometric difference at I600nm /I515nm . Additionally, the lactam ring in Pd2+ coordinated PRS-Pd could be switched back to the closed form in the presence of various thiols, providing a "red-green traffic light" detection mechanism between red and green emission. Furthermore, PRS showed excellent cell viability and was successfully employed to image Pd2+ and the PRS-Pd complex ensemble could interchangeably detect biothiols including glutathione (GSH) in A549 human lung cancer cells.

Development of a Fluorescein-Based Probe with an "Off-On" Mechanism for Selective Detection of Copper (II) Ions and Its Application in Imaging of Living Cells

Copper is a common metallic element that plays an extremely essential role in the physiological activities of living organisms. The slightest change in copper levels in the human body can trigger various diseases. Therefore, it is important to accurately and efficiently monitor copper ion levels in the human body. Recent studies have shown that fluorescent probes have obvious advantages in bioimaging and Cu²⁺ detection. Therefore, a novel Cu²⁺ probe (N2) was designed and synthesized from fluorescein, hydrazine hydrate and 5-p-nitrophenylfurfural that is sensitive to and can detect Cu²⁺ within 100 s. The response mechanism of the N2 probe to Cu²⁺ was studied by several methods such as Job's plots and MS analysis, which showed that the Cu²⁺ and the N2 probe were coordinated in a complexation ratio of 1:1. In addition, compared with other cations investigated in this study, the N2 probe showed excellent selectivity and sensitivity to Cu²⁺, exhibiting distinct fluorescence absorption at 525 nm. Furthermore, in the equivalent range of 0.1-1.5, there is a good linear relationship between Cu²⁺ concentration and fluorescence intensity, and the detection limit is 0.10 μM. It is worth mentioning that the reversible reaction between the N2 probe and Cu²⁺, as well as the good biocompatibility shown by the probe in bioimaging, make it a promising candidate for Cu²⁺ biosensor applications.

Rational design of a FRET-based ratiometric fluorescent probe with large Pseudo-Stokes shift for detecting Hg2+ in living cells based on rhodamine and anthracene fluorophores

The development of fluorescent dyes has been a continuing attractive research topic in the field of fluorescence sensing and bioimaging technologies, most of them were subject to a single signal change. In this work, a novel colorimetric and ratiometric fluorescent probe 1 based on rhodamine and anthracene groups was designed and synthesized via the fluorescence resonance energy transfer (FRET) mechanism. Probe 1 showed excellent selectivity, higher sensitivity and ratiometric response to Hg²⁺ in the CH₃CN/H₂O (1/1, v/v) system, with a fast response time (less than 30 s); The fluorescent color changed from purple to orange and the solution visible to the naked-eye changed from colorless to pink. The Pseudo-Stokes shift was 174 nm upon addition of Hg²⁺. The limit of detection (LOD) was calculated to be 0.81 μM and 0.38 μM according to fluorescence and UV/vis measurements, respectively. Furthermore, a possible mechanism for the detection of Hg²⁺ by probe 1 was verified by using ¹H NMR, ESI-MS, and HPLC spectra. Meanwhile, probe 1 was successfully used for cell imaging for the detection of Hg²⁺ in living cells.

A single small molecule fluorescent probe for imaging RNA distribution and detecting endogenous SO2 through distinct fluorescence channels

Herein, we developed a novel small molecule fluorescent probe for imaging the distribution of RNA and detecting endogenous SO2 through distinct fluorescence channels in cells.

A fluorescence-activatable tumor-reporting probe for precise photodynamic therapy

Approaches that could enable precise photodynamic therapy (PDT) are of therapeutic potential. We herein report a trifunctional probe (Glu-RdEB) that could be activated to generate fluorescent rhodamine species to pinpoint tumor foci. The probe contains a γ-glutaminyl moiety cleavable to γ-glutamyl transpeptidase (GGT) overexpressed in multiple tumors, an entity of an ENBS photosensitizer for PDT, and an entity of rhodamine fluorescently quenched by ENBS. Upon activation by tumor-associated GGT, the probe releases highly fluorescent rhodamine that is selectively confined in tumors whereby light irradiation leads to effective tumor regression in mice. These results indicate the feasibility of a fluorescently quenched dye-photosensitizer pair to yield tumor-activatable fluorescence to direct PDT.

Two water-soluble fluorescence probes based on 5(6)-carboxyl rhodamine for Cu2+ imaging in living cells

Two novel water-soluble fluorescence probes T1 and T2 based on 5(6)-carboxyl rhodamine were designed and synthesized using a regioselective reaction. The probes exhibited highly selective and sensitive recognition toward Cu²⁺ over other metal ions in acetonitrile/Tris-HCl buffer solution (2:98, v/v; pH 7.4). Detection limits were 0.4 μM for T1 and 4.50 μM for T2 based on fluorescence titration analysis. Furthermore, probe T1 was successfully applied in cell imaging experiments to monitor Cu²⁺ in cells.

A New pH-Dependent Macrocyclic Rhodamine B-Based Fluorescent Probe for Copper Detection in White Wine

For efficiently measuring copper (II) ions in the acidic media of white wine, a new chemosensor based on rhodamine B coupled to a tetraazamacrocyclic ring (13aneN₄CH₂NH₂) was designed and synthesized by a one-pot reaction using ethanol as a green solvent. The obtained chemosensor was characterized via NMR, UV and fluorescent spectra. It was marked with no color emission under neutral pH conditions, with a pink color emission under acidic conditions, and a magenta color emission under acidic conditions where copper (II) ions were present. The sensitivity towards copper (II) ions was tested and verified over Ca²⁺, Ag⁺, Zn²⁺, Mg²⁺, Co²⁺, Ni²⁺, Fe²⁺, Pb²⁺, Cd²⁺, Fe³⁺, and Mn²⁺, with a detection limit of 4.38 × 10^-8 M in the fluorescence spectrum.

A pyrazolo[1,5-a]pyridine-based ratiometric fluorescent probe for sensing Cu2+ in cell

Ratiometric fluorescent probes based on FRET mechanism have attracted great attention due to their large pseudo-Stokes shifts and built-in correction for environmental effects. However, most donors failed to meet the requirement that the emission of the donor must overlap well with the absorption of the acceptor. Therefore, searching for new fluorophore to construct FRET system is in great need. In this paper, a new fluorescent dye pyrazolo[1,5-a]pyridine was synthesized and used as a donor in the FRET system for ratiometric sensing of Cu²⁺. The probe is based on FRET and PET mechanism. It shows high selectivity and sensitivity toward Cu²⁺ (detection limit 30 nM). Furthermore, it was successfully used to detect Cu²⁺ in Glioma cells.

Novel polysiloxane-based rhodamine B fluorescent probe for selectively detection of Al3+ and its application in living-cell and zebrafish imaging

Polysiloxanes have excellent stability and biological relevance and are suitable for biological research. However, there were few polysiloxane-based fluorescent probes for bioimaging. This report successfully designed a new polysiloxane-based polymer fluorescent probe (RB-1) for the first time as a "turn-on" fluorescent probe response to Al³⁺ ion with highly sensitive and selectivity. Importantly, this probe could also apply both in cell and zebrafish imaging, indicating the huge application development prospects of polysiloxane-based fluorescent probes in future.

Novel two-photon fluorescent probe with high fluorescence quantum yields for tracking lipid droplets in biological systems

Lipid droplets (LDs) played an important role in storing neutral lipids process. In this work, we developed a series of fluorescent dyes PIE1-PIE4 with high fluorescence quantum yields based on a single phenanthrenequinone imidazole fluorophore core. Among these compounds, we introduced diethyl aniline group on the phenanthrenequinone imidazole core to provide the compound PIE1. It is firstly found that PIE1 could real-color image and track lipid droplets (LDs) in living cells. However, we modified nitrile, imidazole and methyl group on the same fluorophore core to afford three dyes PIE2, PIE3 and PIE4, respectively. Although PIE2, PIE3 and PIE4 possessed high fluorescence quantum yields in various organic solvents, they could not real-color image and track LDs in living cells.

A colorimetric and ratiometric fluorescent sensor for sequentially detecting Cu2+ and arginine based on a coumarin–rhodamine B derivative and its application for bioimaging

In this work, a colorimetric and ratiometric fluorescent sensor based on a coumarin–rhodamine B hybrid for the sequential recognition of Cu²⁺ and arginine (Arg) via the FRET mechanism was designed and synthesized. With the addition of Cu²⁺, the solution displayed a colorimetric change from pale yellow to pink which is discernible by the naked eye. Additionally, the fluorescence intensities of the sensor exhibited ratiometric changes for the detection of Cu²⁺ at 490 and 615 nm under a single excitation wavelength of 350 nm, which corresponded to the emissions of coumarin and rhodamine B moieties, respectively. The fluorescence color change could be visualized from blue to pink. The limits of detection were determined to be as low as 0.50 and 0.47 μM for UV-vis and fluorescence measurements, respectively. More importantly, the sensor not only can recognize Cu²⁺ and form a sensor-Cu²⁺ complex but can also sequentially detect Arg with the resulting complex. The detection limits for Arg were as low as 0.60 μM (UV-vis measurement) and 0.33 μM (fluorescence measurement), respectively. A fluorescence imaging experiment in living cells demonstrated that the fabricated sensor could be utilized in ratiometric fluorescence imaging towards intracellular Cu²⁺, which is promising for the detection of low-level Cu²⁺ and Arg with potentially practical significance.

A FRET-based colorimetric and ratiometric coumarin–rhodamine B fluorescent sensor was designed, and its sensing behaviors for sequentially detecting Cu²⁺ and arginine were studied systematically.

A two-photon excited red-emissive probe for imaging mitochondria with high fidelity and its application in monitoring mitochondrial depolarization via FRET

Two-photon red-emissive fluorescent probes for imaging mitochondria with high-fidelity have been constructed, and mitochondrial depolarization has been visualized with the probe.

Development of a FRET-based ratiometric fluorescent probe to monitor the changes in palladium(ii) in aqueous solution and living cells

We have developed a new small-molecule based, mitochondrial-targeted ratiometric fluorescent palladium(ii) probe (CR-Pd). Fluorescence imaging shows that CR-Pd is suitable for the ratiometric visualization of palladium(ii) in living cells.

A highly selective colorimetric and ratiometric fluorescent probe for instantaneous sensing of Hg2+ in water, soil and seafood and its application on test strips

A new simple and efficient oligothiophene-based colorimetric and ratiometric fluorescent probe has been developed for highly sensitive and fast detection of Hg2+ in water, soil and seafood. The probe 5-(1,3-dithiolan-2-yl)-2,2':5',2″-terthiophene 3 TS can selectively detect Hg2+ via the Hg2+-promoted deprotection reaction of thioacetals, which caused a remarkable color change from colorless to yellow and a strong fluorescence enhancement with emission color varying from blue to yellow, enabling naked-eye detection of Hg2+. The probe shows high sensitivity with the detection limit down to 1.03 × 10-8 M. Visual color changes of 3 TS were observed on filter paper and TLC testing strips when they were impregnated on testing strips and immersed in Hg2+ solution. Moreover, the probe 3 TS has been successfully used to rapidly detect trace amounts of hazardous Hg2+ ions in tap, distilled, river and lake water, cropland soil, fish, shrimp and kelp samples with acceptable results and good recoveries.

A highly selective and sensitive fluorescent probe for Cu2+ based on a novel naphthalimide-rhodamine platform and its application in live cell imaging

Copper plays important roles in a variety of fundamental physiological processes. At the cell organelle level, aberrant copper homeostasis in lysosomes can lead to various serious diseases. Herein, a bifluorophore-based, lysosome-targetable Cu²⁺-selective ratiometric fluorescent probe (V) has been synthesized by reasonable design. The probe V shows high selectivity toward Cu²⁺ ions over other cations and exhibits high sensitivity (1.45 nM) for the detection of Cu²⁺ ions. Meanwhile, the probe is cell permeable and suitable for ratiometric visualization of lysosomal Cu²⁺ in the living cell.

Synthesis and application of a highly selective copper ions fluorescent probe based on the coumarin group

A highly selective copper ions fluorescent probe based on the coumarin-type Schiff base derivative 1 (probe) was produced by condensation reaction between coumarin carbohydrazide and 1H-indazole-3-carbaldehyde. The UV-vis spectroscopy showed that the maximum absorption peak of compound 1 appeared at 439nm. In the presence of Cu²⁺ ions, the maximum peak decreased remarkably compared with other physiological important metal ions and a new absorption peak at 500nm appeared. The job's plot experiments showed that complexes of 1:2 binding mode were formed in CH₃CN:HEPES (3:2, v/v) solution. Compound 1 exhibited a strong blue fluorescence. Upon addition of copper ions, the fluorescence gradually decreased and reached a plateau with the fluorescence quenching rate up to 98.73%. The detection limit for Cu²⁺ ions was estimated to 0.384ppm. Fluorescent microscopy experiments demonstrated that probe 1 had potential to be used to investigate biological processes involving Cu²⁺ ions within living cells.

A two-photon fluorescent probe for detecting lipid droplet viscosity in living cells and zebra fish

A fluorescent probe CBA with high photostability to measure the viscosity changes of lipid drops.

A single fluorescent probe for imaging ribonucleic acid and sulfur dioxide in living systems and its unique application in tumor and normal cells

Herein, the development of EPI-RS is described as the first paradigm of a probe that could image RNA and SO₂ with distinct fluorescence signals in living systems.

Real-time detection and imaging of copper(ii) in cellular mitochondria

L displays high selectivity for Cu²⁺ with a rapidly reversible on–off–on fluorescence switch.

A single colorimetric sensor for multiple targets: the sequential detection of Co2+and cyanide and the selective detection of Cu2+in aqueous solution

A colorimetric chemosensor was developed for simultaneous detection of Co²⁺and Cu²⁺and for sequential recognition of Co²⁺and CN⁻.

Exploration of Energy Modulations in Novel RhB-TPE-Based Bichromophoric Materials via Interactions of Cu(2+) Ion under Various Semiaqueous and Micellar Conditions

Novel bichromophoric materials TR-A and TR-B consisting of an entirely new combination of TPE and RhB units were developed to explore the optimum conditions of energy modulations via pH variation and Cu(2+) interaction at various water contents of CH3CN. Interestingly, TR-A and TR-B, at 60 and 70% water contents, respectively, favored the optimum Cu(2+)-mediated energy modulations from TPE to RhB and thus achieve the brightest orange emissions of free RhB with complete disappearance of aggregation-induced emission (AIE) from TPE. Furthermore, various micellar conditions of triton-X-100, SDS, and CTAB were employed to adjust energy modulations of TR-A and TR-B at high water contents (at 80 and 90%, respectively). The incorporation of RhB into triton-X-100 micellar cavities disrupted AIE from TPE; thus, none of the energy modulations from TPE to RhB occurred even in the presence of Cu(2+) ion. Interestingly, the micellar conditions of anionic surfactant (SDS) favored the increased local concentration of Cu(2+) ions in the vicinity of scavangable RhB and facilitated the generation of noncyclic free RhB in situ via bright-orange emissions.

Rhodamine-modified upconversion nanoprobe for distinguishing Cu2+ from Hg2+ and live cell imaging

A new organic–inorganic hybrid nanoprobe based on luminescence resonance energy transfer (LRET) from mesoporous silica coated upconversion nanoparticles to a rhodamine B derivative was prepared for distinguishing Cu²⁺ from Hg²⁺ and live cell imaging applications.

A ratiometric fluorescence sensor for HOCl based on a FRET platform and application in living cells

A ratiometric fluorescent probe CRSH based on a FRET platform for detecting HOCl. CRSH showed high selectivity, excellent sensitivity and a fast response toward HOCl.

Rhodamine-based ratiometric fluorescent probes based on excitation energy transfer mechanisms: construction and applications in ratiometric sensing

Rhodamine is a convenient platform for the construction of “OFF–ON” ratiometric excitation energy transfer fluorescent probes.

A dual-emission fluorescence-enhanced probe for imaging copper(ii) ions in lysosomes

We have developed the first example of a fluorescence-enhanced and lysosome-targeted Cu²⁺ probe (Lys-Cu) with unique dual-channel emissions. The newly synthesized fluorescent probe Lys-Cu, which contains two recognition sites with different sensing mechanisms for Cu²⁺, displays fluorescence-enhanced dual-channel emissions with fluorescence response to Cu²⁺ in the lysosome pH environment. Fluorescence imaging shows that Lys-Cu is membrane-permeable and suitable for visualization of Cu²⁺ in lysosomes of living cells by dual-channel imaging.