Recent advances in cooperative activation of CO2 and N2O by bimetallic coordination complexes or binuclear reaction pathways

The gaseous small molecules, CO₂ and N₂O, play important roles in climate change and ozone layer depletion, and they hold promise as underutilized reagents and chemical feedstocks. However, productive transformations of these heteroallenes are difficult to achieve because of their inertness. In nature, these gases are cycled through ecological systems by metalloenzymes featuring multimetallic active sites that employ cooperative mechanisms. Thus, cooperative bimetallic chemistry is an important strategy for synthetic systems, as well. In this Perspective, recent advances (since 2010) in cooperative activation of CO₂ and N₂O are reviewed, including examples involving s-block, p-block, d-block, and f-block metals and different combinations thereof.

Coordination chemistry of the CuZ site in nitrous oxide reductase and its synthetic mimics

Atmospheric nitrous oxide (N2O) has garnered significant attention recently due to its dual roles as an ozone depletion agent and a potent greenhouse gas. Anthropogenic N2O emissions occur primarily through agricultural disruption of nitrogen homeostasis causing N2O to build up in the atmosphere. The enzyme responsible for N2O fixation within the geochemical nitrogen cycle is nitrous oxide reductase (N2OR), which catalyzes 2H+/2e- reduction of N2O to N2 and H2O at a tetranuclear active site, CuZ. In this review, the coordination chemistry of CuZ is reviewed. Recent advances in the understanding of biological CuZ coordination chemistry is discussed, as are significant breakthroughs in synthetic modeling of CuZ that have emerged in recent years. The latter topic includes both structurally faithful, synthetic [Cu4(µ4-S)] clusters that are able to reduce N2O, as well as dicopper motifs that shed light on reaction pathways available to the critical CuI-CuIV cluster edge of CuZ. Collectively, these advances in metalloenzyme studies and synthetic model systems provide meaningful knowledge about the physiologically relevant coordination chemistry of CuZ but also open new questions that will pose challenges in the near future.

Impact of Electronic and Steric Changes of Ligands on the Assembly, Stability, and Redox Activity of Cu4(μ4-S) Model Compounds of the CuZ Active Site of Nitrous Oxide Reductase (N2OR)

Model compounds have been widely utilized in understanding the structure and function of the unusual Cu₄(μ₄-S) active site (Cu_Z) of nitrous oxide reductase (N₂OR). However, only a limited number of model compounds that mimic both structural and functional features of Cu_Z are available, limiting insights about Cu_Z that can be gained from model studies. Our aim has been to construct Cu₄(μ₄-S) clusters with tailored redox activity and chemical reactivity via modulating the ligand environment. Our synthetic approach uses dicopper(I) precursor complexes (Cu₂L₂) that assemble into a Cu₄(μ₄-S)L₄ cluster with the addition of an appropriate sulfur source. Here, we summarize the features of the ligands L that stabilize precursor and Cu₄(μ₄-S) clusters, along with the alternative products that form with inappropriate ligands. The precursors are more likely to rearrange to Cu₄(μ₄-S) clusters when the Cu(I) ions are supported by bidentate ligands with 3-atom bridges, but steric and electronic features of the ligand also play crucial roles. Neutral phosphine donors have been found to stabilize Cu₄(μ₄-S) clusters in the 4Cu(I) oxidation state, while neutral nitrogen donors could not stabilize Cu₄(μ₄-S) clusters. Anionic formamidinate ligands have been found to stabilize Cu₄(μ₄-S) clusters in the 2Cu(I):2Cu(II) and 3Cu(I):1Cu(II) states, with both the formation of the dicopper(I) precursors and subsequent assembly of clusters being governed by the steric factor at the ortho positions of the N-aryl substituents. Phosphaamidinates, which combine a neutral phosphine donor and an anionic nitrogen donor in the same ligand, form multinuclear Cu(I) clusters unless the negative charge is valence-trapped on nitrogen, in which case the resulting dicopper precursor is unable to rearrange to a multinuclear cluster. Taken together, the results presented in this study provide design criteria for successful assembly of synthetic model clusters for the Cu_Z active site of N₂OR, which should enable future insights into the chemical behavior of Cu_Z.

Probing the electronic and mechanistic roles of the μ4-sulfur atom in a synthetic CuZ model system

Nitrous oxide (N2O) contributes significantly to ozone layer depletion and is a potent greenhouse agent, motivating interest in the chemical details of biological N2O fixation by nitrous oxide reductase (N2OR) during bacterial denitrification. In this study, we report a combined experimental/computational study of a synthetic [4Cu:1S] cluster supported by N-donor ligands that can be considered the closest structural and functional mimic of the CuZ catalytic site in N2OR reported to date. Quantitative N2 measurements during synthetic N2O reduction were used to determine reaction stoichiometry, which in turn was used as the basis for density functional theory (DFT) modeling of hypothetical reaction intermediates. The mechanism for N2O reduction emerging from this computational modeling involves cooperative activation of N2O across a Cu/S cluster edge. Direct interaction of the μ4-S ligand with the N2O substrate during coordination and N-O bond cleavage represents an unconventional mechanistic paradigm to be considered for the chemistry of CuZ and related metal-sulfur clusters. Consistent with hypothetical participation of the μ4-S unit in two-electron reduction of N2O, Cu K-edge and S K-edge X-ray absorption spectroscopy (XAS) reveal a high degree of participation by the μ4-S in redox changes, with approximately 21% S 3p contribution to the redox-active molecular orbital in the highly covalent [4Cu:1S] core, compared to approximately 14% Cu 3d contribution per copper. The XAS data included in this study represent the first spectroscopic interrogation of multiple redox levels of a [4Cu:1S] cluster and show high fidelity to the biological CuZ site.

Synthesis and Characterization of Cu(II) and Mixed-Valence Cu(I)Cu(II) Clusters Supported by Pyridylamide Ligands

A group of copper complexes supported by polydentate pyridylamide ligands H₂bpda and H₂ppda were synthesized and characterized. The two Cu(II) dimers [Cu^II₂(Hbpda)₂(ClO₄)₂] (1) and [Cu^II₂(ppda)₂(DMF)₂] (2) were constructed by using neutral ligands to react with Cu(II) salts. Although the dimers showed similar structural features, the second-sphere interactions affect the structures differently. With the application of Et₃N, the tetranuclear cluster (HNEt₃)[Cu^II₄(bpda)₂(μ₃-OH)₂(ClO₄)(DMF)₃](ClO₄)₂ (3) and hexanuclear cluster (HNEt₃)₂[Cu^II₆(ppda)₆(H₂O)₂(CH₃OH)₂](ClO₄)₂ (4) were prepared under similar reaction conditions. The symmetrical and unsymmetrical arrangement of the ligand donors in ligands H₂bpda and H₂ppda led to the dramatic conformation difference of the two Cu(II) complexes. As part of our effort to explore mixed-valence copper chemistry, the triple-decker pentanuclear cluster [Cu^II₃Cu^I₂(bpda)₃(μ₃-O)] (5) was prepared. XPS examination demonstrated the localized mixed-valence properties of complex 5. Magnetic studies of the clusters with EPR evidence showed either weak ferromagnetic or antiferromagnetic interactions among copper centers. Due to the trigonal-planar conformation of the trinuclear Cu(II) motif with the μ₃-O center, complex 5 exhibits geometric spin frustration and engages in antisymmetric exchange interactions. DFT calculations were also performed to better interpret spectroscopic evidence and understand the electronic structures, especially the mixed-valence nature of complex 5.

Controlled O2 reduction at a mixed-valent (II,I) Cu2S core

Oxygen reduction reactions catalyzed by a mixed-valent copper complex reveal a tuneable H₂O₂/H₂O selectivity at room temperature together with high stability over several cycles.

N2 O Reductase Activity of a [Cu4 S] Cluster in the 4CuI Redox State Modulated by Hydrogen Bond Donors and Proton Relays in the Secondary Coordination Sphere

The model complex [Cu₄ (μ₄ -S)(dppa)₄ ]²⁺ (1, dppa=μ₂ -(Ph₂ P)₂ NH) has N₂ O reductase activity in methanol solvent, mediating 2 H⁺ /2 e^- reduction of N₂ O to N₂ +H₂ O in the presence of an exogenous electron donor (CoCp₂ ). A stoichiometric product with two deprotonated dppa ligands was characterized, indicating a key role of second-sphere N-H residues as proton donors during N₂ O reduction. The activity of 1 towards N₂ O was suppressed in solvents that are unable to provide hydrogen bonding to the second-sphere N-H groups. Structural and computational data indicate that second-sphere hydrogen bonding induces structural distortion of the [Cu₄ S] active site, accessing a strained geometry with enhanced reactivity due to localization of electron density along a dicopper edge site. The behavior of 1 mimics aspects of the Cu_Z catalytic site of nitrous oxide reductase: activity in the 4Cu^I :1S redox state, use of a second-sphere proton donor, and reactivity dependence on both primary and secondary sphere effects.

Rational Design of Artificial Metalloproteins and Metalloenzymes with Metal Clusters

Metalloproteins and metalloenzymes play important roles in biological systems by using the limited metal ions, complexes, and clusters that are associated with the protein matrix. The design of artificial metalloproteins and metalloenzymes not only reveals the structure and function relationship of natural proteins, but also enables the synthesis of artificial proteins and enzymes with improved properties and functions. Acknowledging the progress in rational design from single to multiple active sites, this review focuses on recent achievements in the design of artificial metalloproteins and metalloenzymes with metal clusters, including zinc clusters, cadmium clusters, iron-sulfur clusters, and copper-sulfur clusters, as well as noble metal clusters and others. These metal clusters were designed in both native and de novo protein scaffolds for structural roles, electron transfer, or catalysis. Some synthetic metal clusters as functional models of native enzymes are also discussed. These achievements provide valuable insights for deep understanding of the natural proteins and enzymes, and practical clues for the further design of artificial enzymes with functions comparable or even beyond those of natural counterparts.

Oxidation of a [Cu2S] complex by N2O and CO2: insights into a role of tetranuclearity in the CuZ site of nitrous oxide reductase

Oxidation of a [Cu2(μ-S)] complex by N2O or CO2 generated a [Cu2(μ-SO4)] product. In the presence of a sulfur trap, a [Cu2(μ-O)] species also formed from N2O. A [Cu2(μ-CS3)] species derived from CS2 modeled initial reaction intermediates. These observations indicate that one role of tetranuclearity in the CuZ catalytic site of nitrous oxide reductase is to protect the crucial S2- ligand from oxidation.

A One-Hole Cu4S Cluster with N2O Reductase Activity: A Structural and Functional Model for CuZ

During bacterial denitrification, two-electron reduction of N₂O occurs at a [Cu₄(μ₄-S)] catalytic site (Cu_Z*) embedded within the nitrous oxide reductase (N₂OR) enzyme. In this Communication, an amidinate-supported [Cu₄(μ₄-S)] model cluster in its one-hole (S = ¹/₂) redox state is thoroughly characterized. Along with its two-hole redox partner and fully reduced clusters reported previously, the new species completes the two-electron redox series of [Cu₄(μ₄-S)] model complexes with catalytically relevant oxidation states for the first time. More importantly, N₂O is reduced by the one-hole cluster to produce N₂ and the two-hole cluster, thereby completing a closed cycle for N₂O reduction. Not only is the title complex thus the best structural model for Cu_Z* to date, but it also serves as a functional Cu_Z* mimic.

Converting between the oxides of nitrogen using metal-ligand coordination complexes

The oxides of nitrogen (chiefly NO, NO3(-), NO2(-) and N2O) are key components of the natural nitrogen cycle and are intermediates in a range of processes of enormous biological, environmental and industrial importance. Nature has evolved numerous enzymes which handle the conversion of these oxides to/from other small nitrogen-containing species and there also exist a number of heterogeneous catalysts that can mediate similar reactions. In the chemical space between these two extremes exist metal-ligand coordination complexes that are easier to interrogate than heterogeneous systems and simpler in structure than enzymes. In this Tutorial Review, we will examine catalysts for the inter-conversions of the various nitrogen oxides that are based on such complexes, looking in particular at more recent examples that take inspiration from the natural systems.

Mixed-valence copper(i,ii) complexes with 4-(1H-pyrazol-1-yl)-6-R-pyrimidines: from ionic structures to coordination polymers

All copper ions in a copper(i,ii) mixed-valence 1D-polymer show tetrahedral coordination cores, CuNBr₃ and CuN₂Br₂, which is extremely rare for mixed-valence copper(i,ii) compounds.

Nitrous oxide activation by a cobalt(ii) complex for aldehyde oxidation under mild conditions

A new cobalt(ii) complex reacts with N₂O under mild conditions and it catalytically performs the oxidation of aldehydes.