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Borah KD, Yamang H, Singh NG, Bhuyan J. Quest for Zinc Methoxyisoporphyrin Molecules: Experimental and Theoretical Studies. ChemistrySelect 2022. [DOI: 10.1002/slct.202103777] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Karishma Devi Borah
- Department of Chemistry North Eastern Institute of Science and Technology Nirjuli Arunachal Pradesh 791101
| | - Hano Yamang
- Department of Chemistry North Eastern Institute of Science and Technology Nirjuli Arunachal Pradesh 791101
| | - N. Ghanashyam Singh
- Department of Chemistry North Eastern Institute of Science and Technology Nirjuli Arunachal Pradesh 791101
| | - Jagannath Bhuyan
- Department of Chemistry North Eastern Institute of Science and Technology Nirjuli Arunachal Pradesh 791101
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Baş Ç, Krumsieck J, Möller W, Körner D, Bröring M. Zinc- and Cadmium meso-Aryl-Isoporphyrins: Non-Aromatic NIR Dyes with Distinct Conformational Features. Chemistry 2021; 27:8021-8029. [PMID: 33826188 PMCID: PMC8252505 DOI: 10.1002/chem.202100686] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2021] [Indexed: 11/26/2022]
Abstract
A series of pyrrolyl and dipyrrinyl isoporphyrins carrying different phenyl and thienyl groups is reported. The compounds are obtained by a one-pot approach in the presence of a template reagent. Thienyl derivatives gave better yields, and were the only subclass to form with steric hindrance. The structural analyses carried out on compounds 1 and 14 revealed distinct conformational differences which are likely to result from an intramolecular NH… Cl hydrogen bridge of the pyrrolyl subclass. In addition, this hydrogen bridge strongly favors one of the two possible atropisomers. Hindered rotation of the meso-aryl groups is observed only in the cases of methylbenzothienyl derivatives 10 and 15 and leads to the observation of several diastereomers. NIR absorptions up to 923 nm are found throughout. Electrochemical investigations into the 1e- and 2e- reduced species unravel axial ligand exchange dynamics for the zinc isoporphyrin radical, and the probable formation of a zinc phlorinate.
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Affiliation(s)
- Çağla Baş
- Institute of Inorganic and Analytical ChemistryTU BraunschweigHagenring 3038106BraunschweigGermany
| | - Jens Krumsieck
- Institute of Inorganic and Analytical ChemistryTU BraunschweigHagenring 3038106BraunschweigGermany
| | - William‐Dale Möller
- Institute of Inorganic and Analytical ChemistryTU BraunschweigHagenring 3038106BraunschweigGermany
| | - Dominik Körner
- Institute of Inorganic and Analytical ChemistryTU BraunschweigHagenring 3038106BraunschweigGermany
| | - Martin Bröring
- Institute of Inorganic and Analytical ChemistryTU BraunschweigHagenring 3038106BraunschweigGermany
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Borah BP, Majumder S, Borah KD, Bhuyan J. The quest for a better understanding of ethanol coordination to magnesium and zinc porphyrin: A combined experimental and theoretical study. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129646] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Gericke R, Doyle LM, Farquhar ER, McDonald AR. Oxo-Free Hydrocarbon Oxidation by an Iron(III)-Isoporphyrin Complex. Inorg Chem 2020; 59:13952-13961. [PMID: 32955871 DOI: 10.1021/acs.inorgchem.0c01618] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Metal-halides that perform proton coupled electron-transfer (PCET) oxidation are an important new class of high-valent oxidant. In investigating metal-dihalides, we reacted [FeIII(Cl)(T(OMe)PP)] (1, T(OMe)PP = meso-tetra(4-methoxyphenyl)porphyrinyl) with (dichloroiodo)benzene. An FeIII-meso-chloro-isoporphyrin complex [FeIII(Cl)2(T(OMe)PP-Cl)] (2) was obtained. 2 was characterized by electronic absorption, 1H NMR, EPR, and X-ray absorption spectroscopies and mass spectrometry with support from computational analyses. 2 was reacted with a series of hydrocarbon substrates. The measured kinetic data exhibited a nonlinear behavior, whereby the oxidation followed a hydrogen-atom-transfer (HAT) PCET mechanism. The meso-chlorine atom was identified as the HAT agent. In one case, a halogenated product was identified by mass spectrometry. Our findings demonstrate that oxo-free hydrocarbon oxidation with heme systems is possible and show the potential for iron-dihalides in oxidative hydrocarbon halogenation.
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Affiliation(s)
- Robert Gericke
- School of Chemistry, College Green, Trinity College Dublin, The University of Dublin, Dublin 2 D02 PN40, Ireland
| | - Lorna M Doyle
- School of Chemistry, College Green, Trinity College Dublin, The University of Dublin, Dublin 2 D02 PN40, Ireland
| | - Erik R Farquhar
- National Synchrotron Light Source II, Brookhaven National Laboratory, Case Western Reserve University Center for Synchrotron Biosciences, Upton, New York 11973, United States
| | - Aidan R McDonald
- School of Chemistry, College Green, Trinity College Dublin, The University of Dublin, Dublin 2 D02 PN40, Ireland
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Singh NG, Borah KD, Majumder S, Bhuyan J. Ethanol coordinated zinc trimethoxyphenylporphyrin: Structure, theoretical studies and formation of isoporphyrin. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127116] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Borah KD, Bhuyan J. Methoxy-isoporphyrins of water-soluble porphyrins: synthesis, characterization and electrochemical properties. J COORD CHEM 2019. [DOI: 10.1080/00958972.2019.1654092] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Karishma Devi Borah
- Department of Chemistry, North Eastern Regional Institute of Science and Technology (NERIST), Nirjuli, India
| | - Jagannath Bhuyan
- Department of Chemistry, North Eastern Regional Institute of Science and Technology (NERIST), Nirjuli, India
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Ehudin MA, Senft L, Franke A, Ivanović-Burmazović I, Karlin KD. Formation and Reactivity of New Isoporphyrins: Implications for Understanding the Tyr-His Cross-Link Cofactor Biogenesis in Cytochrome c Oxidase. J Am Chem Soc 2019; 141:10632-10643. [PMID: 31150209 DOI: 10.1021/jacs.9b01791] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Cytochrome c oxidase (CcO) catalyzes the reduction of dioxygen to water utilizing a heterobinuclear active site composed of a heme moiety and a mononuclear copper center coordinated to three histidine residues, one of which is covalently cross-linked to a tyrosine residue via a post-translational modification (PTM). Although this tyrosine-histidine moiety has functional and structural importance, the pathway behind this net oxidative C-N bond coupling is still unknown. A novel route employing an iron(III) meso-substituted isoporphyrin derivative, isoelectronic with Cmpd-I ((Por•+)FeIV═O), is for the first time proposed to be a key intermediate in the Tyr-His cofactor biogenesis. Newly synthesized iron(III) meso-substituted isoporphyrins were prepared with azide, cyanide, and substituted imidazole functionalities, by adding nucleophiles to an iron(III) π-dication species formed via addition of trifluoroacetic acid to F8Cmpd-I (F8 = (tetrakis(2,6-difluorophenyl)porphyrinate)). Isoporphyrin derivatives were characterized at cryogenic temperatures via ESI-MS and UV-vis, 2H NMR, and EPR spectroscopies. Addition of 1,3,5-trimethoxybenzene or 4-methoxyphenol to the imidazole-substituted isoporphyrin led to formation of the organic product containing the imidazole coupled to aromatic substrate via a new C-N bond, as detected via cryo-ESI-MS. Experimental evidence for the formation of an imidazole-substituted isoporphyrin and its promising reactivity to form the imidazole-phenol coupled product yields viability to the herein proposed pathway behind the PTM (i.e., biogenesis) leading to the key covalent Tyr-His cross-link in CcO.
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Affiliation(s)
- Melanie A Ehudin
- Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Laura Senft
- Department of Chemistry and Pharmacy , Friedrich-Alexander University Erlangen-Nuremberg , 91058 Erlangen , Germany
| | - Alicja Franke
- Department of Chemistry and Pharmacy , Friedrich-Alexander University Erlangen-Nuremberg , 91058 Erlangen , Germany
| | - Ivana Ivanović-Burmazović
- Department of Chemistry and Pharmacy , Friedrich-Alexander University Erlangen-Nuremberg , 91058 Erlangen , Germany
| | - Kenneth D Karlin
- Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States
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Boudiaf M, Liang Y, Lamare R, Weiss J, Ibrahim H, Goldmann M, Bentouhami E, Badets V, Choua S, Le Breton N, Bonnefont A, Ruhlmann L. Stable isoporphyrin copolymer: Electrochemical mechanism and behavior and photovoltaic properties. Electrochim Acta 2019. [DOI: 10.1016/j.electacta.2019.04.050] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Franzke YJ, Sundholm D, Weigend F. Calculations of current densities and aromatic pathways in cyclic porphyrin and isoporphyrin arrays. Phys Chem Chem Phys 2018; 19:12794-12803. [PMID: 28484758 DOI: 10.1039/c7cp00624a] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Magnetically induced current density susceptibilities have been studied for a number of cyclic ethyne- and butadiyne-bridged porphyrin and isoporphyrin arrays. The current density susceptibilities have been calculated using the gauge-including magnetically induced current (GIMIC) method, which is interfaced to the TURBOMOLE quantum chemistry code. Aromatic properties and current pathways have been analyzed and discussed by numerical integration of the current density susceptibilities passing selected chemical bonds yielding current strength susceptibilities. Despite the interrupted π-framework, zinc(ii) isoporphyrin sustains a ring current of ca. 10 nA T-1. Porphyrin and isoporphyrin dimers sustain a significant current strength at the linker, whereas the larger porphyrinoid arrays sustain mainly local ring currents. Isoporphyrin dimers with saturated meso carbons have strong net diatropic ring-current strengths of 20 nA T-1 fulfilling Hückels aromaticity rule. Porphyrin trimers and tetramers exhibit almost no current strength at the linker. The porphyrin moieties maintain their strong net diatropic ring current.
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Affiliation(s)
- Yannick J Franzke
- Department of Chemistry, University of Helsinki, P. O. Box 55, FIN-00014 Helsinki, Finland.
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Abstract
A review on the chemistry of magnesium porphyrins, which have significant interest owing to the relevance to chlorophyll molecules, is presented with emphasis on bicarbonate adducts of magnesium porphyrin and chlorophyll.
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Affiliation(s)
- Karishma Devi Borah
- Department of Chemistry
- North Eastern Regional Institute of Science and Technology
- Nirjuli
- India
| | - Jagannath Bhuyan
- Department of Chemistry
- North Eastern Regional Institute of Science and Technology
- Nirjuli
- India
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Schweyen P, Hoffmann M, Krumsieck J, Wolfram B, Xie X, Bröring M. Metallvermittelte Eintopfsynthese von Isoporphyrin-Komplexen. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201604297] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Peter Schweyen
- Institut für Anorganische und Analytische Chemie; TU Braunschweig; Hagenring 30 38106 Braunschweig Deutschland
| | - Martin Hoffmann
- Institut für Anorganische und Analytische Chemie; TU Braunschweig; Hagenring 30 38106 Braunschweig Deutschland
| | - Jens Krumsieck
- Institut für Anorganische und Analytische Chemie; TU Braunschweig; Hagenring 30 38106 Braunschweig Deutschland
| | - Benedikt Wolfram
- Institut für Anorganische und Analytische Chemie; TU Braunschweig; Hagenring 30 38106 Braunschweig Deutschland
| | - Xiulan Xie
- Fachbereich Chemie; Philipps-Universität Marburg; Hans-Meerwein-Straße 35032 Marburg Deutschland
| | - Martin Bröring
- Institut für Anorganische und Analytische Chemie; TU Braunschweig; Hagenring 30 38106 Braunschweig Deutschland
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Schweyen P, Hoffmann M, Krumsieck J, Wolfram B, Xie X, Bröring M. Metal-Assisted One-Pot Synthesis of Isoporphyrin Complexes. Angew Chem Int Ed Engl 2016; 55:10118-21. [DOI: 10.1002/anie.201604297] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2016] [Revised: 06/06/2016] [Indexed: 11/08/2022]
Affiliation(s)
- Peter Schweyen
- Institute for Inorganic and Analytical Chemistry; TU Braunschweig; Hagenring 30 38106 Braunschweig Germany
| | - Martin Hoffmann
- Institute for Inorganic and Analytical Chemistry; TU Braunschweig; Hagenring 30 38106 Braunschweig Germany
| | - Jens Krumsieck
- Institute for Inorganic and Analytical Chemistry; TU Braunschweig; Hagenring 30 38106 Braunschweig Germany
| | - Benedikt Wolfram
- Institute for Inorganic and Analytical Chemistry; TU Braunschweig; Hagenring 30 38106 Braunschweig Germany
| | - Xiulan Xie
- Fachbereich Chemie; Philipps-Universität Marburg; Hans-Meerwein-Strasse 35032 Marburg Germany
| | - Martin Bröring
- Institute for Inorganic and Analytical Chemistry; TU Braunschweig; Hagenring 30 38106 Braunschweig Germany
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