A tuning fork-shaped bisbenzothiazole derivative as a pH-responsive digital fluorescent probe and its ex vivo evaluation

A new highly emissive pH-responsive near-IR active digital probe was designed and synthesized. The probe is based on a bisbenzothiazole motif with a highly vulnerable hydrogen unit attached in an intramolecular fashion. The probe produced a large Stokes shift which was observed to be highly pH dependent. The optical pH dependence can be used for sensing pH over a wide range.

A pH-responsive ratiometric fluorescence system based on AIZS QDs and azamonardine for urea detection

Herein, a ratiometric fluorescent nanoprobe was strategically fabricated using pH-sensitive azamonardine (Aza) as a pH indicator and pH-insensitive AIZS QDs as a reference fluorescence signal for urea activity determination and pH sensing. As the pH changed from 9.7 to 11.7, the resorcinol could react with dopamine to form the cyclization product (Aza), producing a fluorescence signal at 455 nm. Meanwhile, the fluorescence intensity of AIZS QDs at 566 nm remained unchanged. Thus, the ratio of the fluorescence intensity (F₄₅₅/F₅₆₆) was able to quantify pH value. Our designed pH-sensing platform showed a linear respond to pH values in the range of 9.7 to 11.7 at intervals of 0.2. In addition, the hydrolysis of urea by urease caused an increase of the system pH value, which can be used to measure the concentration of urea. The developed method for urea determination exhibited a good linear relationship from 0.02 to 20 mM and the limit of detection was 0.0103 mM. Moreover, the practical application was confirmed by urea analysis in real water sample with high feasibility and accuracy, indicating the great application prospects of this sensing platform for urea activity analysis.

Imidazolyl-benzocoumarins as ratiometric fluorescence probes for biologically extreme acidity

A rational approach to develop a fluorescent probe for sensing biologically "extreme" acidity (pH <3) is disclosed. The probe, a push-full type 3-(imidazolyl)benzocoumarin dye, has the lowest pK_a = 1.3 among ratiometric probes known so far, which is ascribed due to a unique sensing mechanism. The probe has high quantum yields, high chemical stability and good aqueous solubility. The probe was successfully applied to ratiometric fluorescence imaging of intrabacterial acidity from pH 4.0-1.0, offering a practical means for studying biological systems under the extreme pH conditions.

Steric-Free Bioorthogonal Labeling of Acetylation Substrates Based on a Fluorine-Thiol Displacement Reaction

We have developed a novel bioorthogonal reaction that can selectively displace fluorine substitutions alpha to amide bonds. This fluorine-thiol displacement reaction (FTDR) allows for fluorinated cofactors or precursors to be utilized as chemical reporters, hijacking acetyltransferase-mediated acetylation both in vitro and in live cells, which cannot be achieved with azide- or alkyne-based chemical reporters. The fluoroacetamide labels can be further converted to biotin or fluorophore tags using FTDR, enabling the general detection and imaging of acetyl substrates. This strategy may lead to a steric-free labeling platform for substrate proteins, expanding our chemical toolbox for functional annotation of post-translational modifications in a systematic manner.

4-Methyl-2,6-diformylphenol based biocompatible chemosensors for pH: discrimination between normal cells and cancer cells

Two compounds, namely, 2-hydroxy-5-methyl-3-((pyridin-2-ylimino)methyl)benzaldehyde (HM-2py-B) and 2-hydroxy-5-methyl-3-((pyridin-3-ylimino)methyl)benzaldehyde (HM-3py-B), have been explored as fluorescent chemosensors for pH. HM-2py-B and HM-3py-B were synthesized by single step condensation reaction between 4-methyl-2,6-diformylphenol and the appropriate aminopyridine. These compounds have been characterized by elemental analysis, FT-IR, ¹H NMR, ¹³C NMR, ESI mass spectrometry, and absorption and fluorescence spectroscopy. Their structures have been confirmed by single crystal X-ray diffraction analysis. Both of the compounds show low emission at 530 nm at low pH. Fluorescence intensity increases with the increase in pH. With the alteration in pH of the medium from 4.0 to 10.0, the fluorescence intensity at 530 nm enhances by 66 and 195 fold for HM-2py-B and HM-3py-B, respectively. pK_a values of HM-2py-B and HM-3py-B have been determined to be 7.15 and 6.57, respectively. Fluorescence increase occurs mainly due to deprotonation of the phenolic OH group. Several cations and anions could not induce significant change in fluorescence behavior for both of the probes. The quantum yield and life-time enhance significantly when the pH of the medium is changed from 5.0 to 9.0. Naked eye identification of different pH environments is possible by using these compounds. Some theoretical calculations have been carried out to support experimentally obtained spectral transitions. As cancer cell has a pH in the range of 5.5–7.0 in comparison to normal cell pH of 7.4, these probes have been used effectively to discriminate between normal cells and cancer cells.

Two 4-methyl-2,6-diformylphenol based compounds with pyridylamine have been established as chemosensors for pH. The probes are able to differentiate between normal cells and cancer cells.

A dansyl fluorescent pH probe with wide responsive range in aqueous solution

A fluorescent pH probe based on diphenylalanine-modified dansyl (FF-Dns) was designed and synthesized. The probe showed sensitive fluorescence emission to pH change over a wide range of 1-13 in aqueous solution. At pH 4-10, FF-Dns displayed the characteristic fluorescent emission of dansyl group (yellow); while protonation of the dimethylamino group caused a very weak fluorescence emission at pH 1-4, and deprotonation of the sulfonamide group caused an emission blue-shift to the green region at pH 11-13. These properties endow FF-Dns with the potential to detect pH variation in physiological environments.

Coumarin-Based Small-Molecule Fluorescent Chemosensors

Coumarins are a very large family of compounds containing the unique 2H-chromen-2-one motif, as it is known according to IUPAC nomenclature. Coumarin derivatives are widely found in nature, especially in plants and are constituents of several essential oils. Up to now, thousands of coumarin derivatives have been isolated from nature or produced by chemists. More recently, the coumarin platform has been widely adopted in the design of small-molecule fluorescent chemosensors because of its excellent biocompatibility, strong and stable fluorescence emission, and good structural flexibility. This scaffold has found wide applications in the development of fluorescent chemosensors in the fields of molecular recognition, molecular imaging, bioorganic chemistry, analytical chemistry, materials chemistry, as well as in the biology and medical science communities. This review focuses on the important progress of coumarin-based small-molecule fluorescent chemosensors during the period of 2012-2018. This comprehensive and critical review may facilitate the development of more powerful fluorescent chemosensors for broad and exciting applications in the future.