Effective separation of aromatic and aliphatic amino acids mixtures using ionic-liquid-based aqueous biphasic systems

PepAnalyzer: predicting peptide properties using its sequence

Peptides are short linear molecules consisting of amino acids that play an essential role in most biological processes. They can treat diseases by working as a vaccine or antimicrobial agent and serves as a cancer molecule to deliver the drug to the target site for the treatment of cancer. They have the potential to solve the drawbacks of current medications and can be industrially produced in large quantities at low cost. However, poor chemical and physical stability, short circulating plasma half-life, and solubility are some issues that need solutions before they can be used as therapeutics. PepAnalyzer tool is a user-friendly tool that predicts 15 different properties such as binding potential, half-life, transmembrane patterns, test tube stability, charge, isoelectric point, molecular weights, and molar extinction coefficients only using the sequence. The tool is designed using BioPython utility and has even results with standard tools, such as Expasy, EBI, Genecorner, and Geneinfinity. The tool assists students, researchers, and the pharmaceutical sector. The PepAnalyzer tool's online platform is accessible at the link: http://www.iksmbrlabdu.in/peptool .

The structural and hydrogen bonding properties of ionic liquid-co-solvent binary mixtures: the distinct behaviors of two anions

In practical applications, ionic liquids are often mixed with co-solvents. Understanding their structures and the interactions between them is a prerequisite for expanding their range of applications. In this work, spectroscopic and theoretical methods were employed to explore the structure and hydrogen bonding behaviors of 1-ethyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide (EMIMTFSI)/1-ethyl-3-methylimidazolium thiocyanate (EMIMSCN) and co-solvents. It can be concluded that the hydrogen bonds associated with C2-H and C4,5-H are enhanced with the addition of co-solvents in the EMIMTFSI-DMSO system, while those associated with C4,5-H are weakened in the EMIMSCN-DMSO system. Infrared and excess spectra in the v(imidazolium C-H) range of EMIMSCN-CD3CN/CD3COCD3 systems further indicate that the abnormal change of hydrogen bonds associated with C4,5-H can be attributed to [SCN]-. These differences can be explained by the change of the primary interaction site. For EMIMTFSI, the primary interaction site in ion pairs and ion clusters is always C2-H, while for EMIMSCN, the primary interaction site in ion pairs is C2-H, and in ion clusters, it becomes C4,5-H. In the EMIMTFSI-DMSO system, the co-solvent primarily interacts with C4,5-H, while in the EMIMSCN-DMSO/CH3CN/CH3COCH3 systems, it primarily interacts with C2-H. In addition, several complexes are identified through excess infrared spectra and DFT calculations.

Separation of Benzene and Cyclohexane Using Eutectic Solvents with Aromatic Structure

The separation of benzene and cyclohexane is a challenging process in the petrochemical industry, mainly because of their close boiling points. Extractive separation of the benzene-cyclohexane mixture has been shown to be feasible, but it is important to find solvents with good extractive performance. In this work, 23 eutectic solvents (ESs) containing aromatic components were screened using the predictive COSMO-RS and their respective performance was compared with other solvents. The screening results were validated with experimental work in which the liquid–liquid equilibria of the three preselected ESs were studied with benzene and cyclohexane at 298.5 K and 101.325 kPa, with benzene concentrations in the feed ranging from 10 to 60 wt%. The performance of the ESs studied was compared with organic solvents, ionic liquids, and other ESs reported in the literature. This work demonstrates the potential for improved extractive separation of the benzene-cyclohexane mixture by using ESs with aromatic moieties.

Type II porous ionic liquid based on metal-organic cages that enables L-tryptophan identification

Porous liquids with chemical separation properties are quite well-studied in general, but there is only a handful of reports in the context of identification and separation of non-gaseous molecules. Herein, we report a Type II porous ionic liquid composed of coordination cages that exhibits exceptional selectivity towards L-tryptophan (L-Trp) over other aromatic amino acids. A previously known class of anionic organic-inorganic hybrid doughnut-like cage (HD) is dissolved in trihexyltetradecylphosphonium chloride (THTP_Cl). The resulting liquid, HD/THTP_Cl, is thereby composed of common components, facile to prepare, and exhibit room temperature fluidity. The permanent porosity is manifested by the high-pressure isotherm for CH4 and modeling studies. With evidence from time-dependent amino acid uptake, competitive extraction studies and molecular dynamic simulations, HD/THTP_Cl exhibit better selectivity towards L-Trp than other solid state sorbents, and we attribute it to not only the intrinsic porosity of HD but also the host-guest interactions between HD and L-Trp. Specifically, each HD unit is filled with nearly 5 L-Trp molecules, which is higher than the L-Trp occupation in the structure unit of other benchmark metal-organic frameworks.

Recent Developments in Solvent-Based Fluid Separations

The most important developments in solvent-based fluid separations, separations involving at least one fluid phase, are reviewed. After a brief introduction and discussion on general solvent trends observed in all fields of application, several specific fields are discussed. Important solvent trends include replacement of traditional molecular solvents by ionic liquids and deep eutectic solvents and, more recently, increasing discussion around bio-based solvents in some application fields. Furthermore, stimuli-responsive systems are discussed; the most significant developments in this field are seen for CO₂-switchable and redox-responsive solvents. Discussed fields of application include hydrocarbons separations, carbon capture, biorefineries, and metals separations. For all but the hydrocarbons separations, newly reported electrochemically mediated separations seem to offer exciting new windows of opportunities.

Recuperative Amino Acids Separation through Cellulose Derivative Membranes with Microporous Polypropylene Fiber Matrix

The separation, concentration and transport of the amino acids through membranes have been continuously developed due to the multitude of interest amino acids of interest and the sources from which they must be recovered. At the same time, the types of membranes used in the sepa-ration of the amino acids are the most diverse: liquids, ion exchangers, inorganic, polymeric or composites. This paper addresses the recuperative separation of three amino acids (alanine, phe-nylalanine, and methionine) using membranes from cellulosic derivatives in polypropylene ma-trix. The microfiltration membranes (polypropylene hollow fibers) were impregnated with solu-tions of some cellulosic derivatives: cellulose acetate, 2-hydroxyethyl-cellulose, methyl 2-hydroxyethyl-celluloseand sodium carboxymethyl-cellulose. The obtained membranes were characterized in terms of the separation performance of the amino acids considered (retention, flux, and selectivity) and from a morphological and structural point of view: scanning electron microscopy (SEM), high resolution SEM (HR-SEM), Fourier transform infrared spectroscopy (FT-IR), energy dispersive spectroscopy (EDS) and thermal gravimetric analyzer (TGA). The re-sults obtained show that phenylalanine has the highest fluxes through all four types of mem-branes, followed by methionine and alanine. Of the four kinds of membrane, the most suitable for recuperative separation of the considered amino acids are those based on cellulose acetate and methyl 2-hydroxyethyl-cellulose.

Aqueous Biphasic Systems Containing Customizable Poly(Ionic Liquid)s for Highly Efficient Extractions

Ionic liquid (IL)-based aqueous biphasic systems (ABSs) provide a sustainable and efficient alternative to conventional liquid-liquid extraction techniques and can be used for the extraction, recovery, and purification of diverse solutes. However, the construction of a high-performance ABS that has both excellent phase separation ability and extraction performance remains challenging. This study concerns the preparation of a family of novel ABSs based on poly(ionic liquid)s (PILs) with customized structure and controllable molecular weight for the extraction of bioactive compounds. Several tailor-made PILs consisting of a hydrophobic backbone, hydrophilic imidazolium pendant groups and strong hydrogen bonding basic counteranions are prepared by reversible addition fragmentation chain-transfer polymerization. The PILs have a perfect balance of hydrophobicity/hydrophilicity and functionality, affording outstanding phase separation, which was better than with either the IL monomer poly(1-butyl-3-vinylimidazolium bromide ([BVIm]Br) or the normal free-radical polymer P[BVIm]Br*. More importantly, PIL-based ABSs exhibited unprecedented high partition coefficients for six bioactive compounds including tryptophan, phenylalanine, and caffeine, as well as high extraction yields. The performance of the PIL-based ABSs could also be tuned by changing the molecular weight and anionic character of the PILs. This work shows that tailor-made PIL-based ABSs are a promising platform for bioactive compound extraction and provides significant clues for the design of new ABSs for various applications.

Development of different deep eutectic solvent aqueous biphasic systems for the separation of proteins

In this work, aqueous biphasic systems (ABSs) formed by different deep eutectic solvents (DESs) were prepared and applied to extract proteins. The five kinds of DESs comprised amino acids and polyols ([amino acids][polyols]). They were combined with another DES resulting from tetrabutylammonium chloride and polypropylene glycol 400 ([TBAC][PPG400]) to form ABSs. The phase-forming abilities of [TBAC][PPG400]/[amino acids][polyols] were compared with those of [TBAC][PPG400]/amino acids and [TBAC][PPG400]/polyols. The results exhibited that the biphasic formation ability of [amino acids][polyols] lies between those of amino acids and polyols when [TBAC][PPG400] acts as the other phase in ABSs. The systems comprising [TBAC][PPG400] and [l-proline][xylitol] ([Pro][Xyl]) were further investigated to optimize the extraction performance. It was found that 97.30% chymotrypsin tended to distribute into the [Pro][Xyl]-rich phase under optimum conditions. The practical application of the system was demonstrated by the extraction of chymotrypsin from porcine pancreas. Besides, UV-Vis spectrophotometry (UV-Vis), Fourier transform infrared spectroscopy (FT-IR), and circular dichroism (CD) spectroscopy proved that the conformation of proteins remained unchanged during the extraction process. The extraction mechanism of the formation of DES-protein aggregates was investigated via conductivity, dynamic light scattering (DLS), and transmission electron microscopy (TEM). The overall results suggest that the DES/DES-based ABSs have outstanding potential in the green extraction of proteins.

Protein-Rich Biomass Waste as a Resource for Future Biorefineries: State of the Art, Challenges, and Opportunities

Protein-rich biomass provides a valuable feedstock for the chemical industry. This Review describes every process step in the value chain from protein waste to chemicals. The first part deals with the physicochemical extraction of proteins from biomass, hydrolytic degradation to peptides and amino acids, and separation of amino acid mixtures. The second part provides an overview of physical and (bio)chemical technologies for the production of polymers, commodity chemicals, pharmaceuticals, and other fine chemicals. This can be achieved by incorporation of oligopeptides into polymers, or by modification and defunctionalization of amino acids, for example, their reduction to amino alcohols, decarboxylation to amines, (cyclic) amides and nitriles, deamination to (di)carboxylic acids, and synthesis of fine chemicals and ionic liquids. Bio- and chemocatalytic approaches are compared in terms of scope, efficiency, and sustainability.

Membranes with Functionalized Nanopores for Aromaticity-Based Separation of Small Molecules

Membranes that can separate molecules of similar size based on chemical features could transform chemical manufacturing. We demonstrate membranes with functional, 1-3 nm pores prepared using a simple and scalable approach: coating a porous support with random copolymer micelles in alcohol, followed by precipitation in water and functionalization of pore surfaces. This approach was used to prepare membranes that can separate two hormones of similar size and charge, differentiated by aromaticity, mediated through π-π interactions between the aromatic solute and pore walls functionalized with phenol groups. The aromatic molecule permeates more slowly in single-solute experiments. In competitive diffusion experiments, however, it permeates 7.1 times faster than its nonaromatic analogue. This approach can be used to manufacture membranes for complex separations based on various intermolecular interactions.

Pioneering Use of Ionic Liquid-Based Aqueous Biphasic Systems as Membrane-Free Batteries

Aqueous biphasic systems (ABS) formed by water, ionic liquids (ILs), and salts, in which the two phases are water rich, are demonstrated here to act as potential membrane-free batteries. This concept is feasible due to the selective enrichment of redox organic molecules in each aqueous phase of ABS, which spontaneously form two liquid-phases above given concentrations of salt and IL. Therefore, the required separation of electrolytes in the battery is not driven by an expensive membrane that hampers mass transfer, but instead, by the intrinsic immiscibility of the two liquid phases. Moreover, the crosscontamination typically occurring through the ineffective membranes is determined by the partition coefficients of the active molecules between the two phases. The phase diagrams of a series of IL-based ABS are characterized, the partition coefficients of several redox organic molecules are determined, and the electrochemistry of these redox-active immiscible phases is evaluated, allowing appraisal of the battery performance. Several redox ABS that may be used in total aqueous membrane-free batteries with theoretical battery voltages as high as 1.6 V are identified. The viability of a membrane-free battery composed of an IL-based ABS containing methyl viologen and 2,2,6,6-tetramethyl-1-piperidinyloxy as active species is demonstrated.

Enhanced separation performance of aqueous biphasic systems formed by carbohydrates and tetraalkylphosphonium- or tetraalkylammonium-based ionic liquids

Aiming at establishing more effective and sustainable separation processes, herein we propose the use of carbohydrates combined with tetralkylphosphonium- and tetralkylammonium-based ionic liquids (ILs) to form aqueous biphasic systems (ABS). The formation of ABS composed of non-aromatic and non-fluorinated ILs with carbohydrates is here shown for the first time. These novel systems are competive extraction platforms when compared against more conventional ABS formed by ILs and salts or fluorinated ILs and carbohydrates. Finally, it is shown that these systems can be efficiently recovered and reused.

Adsorption and Separation of Aromatic Amino Acids from Aqueous Solutions Using Metal-Organic Frameworks

Metal-organic frameworks (MOFs) are investigated for the adsorption of aromatic amino acids l-phenylalanine (l-Phe), l-tryptophan (l-Trp), and l-tyrosine (l-Tyr) from aqueous solutions. After screening a range of water-stable MOFs, the hydrophobic Zr-MOF MIL-140C emerged as the best performing material, exhibiting uptakes of 15 wt % for l-Trp and 20 wt % for l-Phe. These uptakes are 5-10 wt % higher than those of large-pore zeolites Beta and Y. Both single-compound and competitive adsorption isotherms for l-Phe and l-Trp were experimentally obtained at the natural pH of these amino acid mixtures (pH 6.5-7) without additional pH modification. We find that the hydrophobic nature of MIL-140C and the capacity of l-Trp to form hydrogen bonds favor the uptake of l-Trp with its larger indole moiety compared to the smaller phenyl side group of l-Phe. On the basis of literature and vibrational analysis, observations of hydrogen-bonded l-Trp within the MIL-140C framework are evidenced by red- and blue-shifted -NH vibrations (3400 cm^-1) in Fourier transform infrared spectroscopy, which were attributed to types N-H_l-Trp···π_MIL-140C and N-H_l-Trp···O_MIL-140C, respectively. MIL-140C is shown to be recycled at least three times for both aromatic amino acids without any loss of adsorption capacity, separation performance, or crystallinity. Desorption of aromatic amino acids proceeds easily in aqueous ethanol. Substantial coadsorption of negatively charged amino acids l-glutamate and l-aspartate (l-Glu and l-Asp) was observed from a model solution for wheat straw protein hydrolysate at pH 4.3. On the basis of these results, we conclude that MIL-140C is an interesting material for the recovery of essential aromatic amino acids l-Tyr, l-Phe, and l-Trp and of l-Glu and l-Asp from waste protein hydrolysates.

Green aqueous biphasic systems containing deep eutectic solvents and sodium salts for the extraction of protein

Deep eutectic solvents (DESs), a new type of green solvents, were applied for the extraction of proteins with aqueous biphasic systems (ABSs) in this study.