1
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Jamagne R, Power MJ, Zhang ZH, Zango G, Gibber B, Leigh DA. Active template synthesis. Chem Soc Rev 2024. [PMID: 39235620 DOI: 10.1039/d4cs00430b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/06/2024]
Abstract
The active template synthesis of mechanically interlocked molecular architectures exploits the dual ability of various structural elements (metals or, in the case of metal-free active template synthesis, particular arrangements of functional groups) to serve as both a template for the organisation of building blocks and as a catalyst to facilitate the formation of covalent bonds between them. This enables the entwined or threaded intermediate structure to be covalently captured under kinetic control. Unlike classical passive template synthesis, the intercomponent interactions transiently used to promote the assembly typically do not 'live on' in the interlocked product, meaning that active template synthesis can be traceless and used for constructing mechanically interlocked molecules that do not feature strong binding interactions between the components. Since its introduction in 2006, active template synthesis has been used to prepare a variety of rotaxanes, catenanes and knots. Amongst the metal-ion-mediated versions of the strategy, the copper(I)-catalysed alkyne-azide cycloaddition (CuAAC) remains the most extensively used transformation, although a broad range of other catalytic reactions and transition metals also provide effective manifolds. In metal-free active template synthesis, the recent discovery of the acceleration of the reaction of primary amines with electrophiles through the cavity of crown ethers has proved effective for forming an array of rotaxanes without recognition elements, including compact rotaxane superbases, dissipatively assembled rotaxanes and molecular pumps. This Review details the active template concept, outlines its advantages and limitations for the synthesis of interlocked molecules, and charts the diverse set of reactions that have been used with this strategy to date. The application of active template synthesis in various domains is discussed, including molecular machinery, mechanical chirality, catalysis, molecular recognition and various aspects of materials science.
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Affiliation(s)
- Romain Jamagne
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK.
| | - Martin J Power
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK.
| | - Zhi-Hui Zhang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China
| | - Germán Zango
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK.
| | - Benjamin Gibber
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK.
| | - David A Leigh
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK.
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China
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2
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Bouwens T, Bakker TMA, Zhu K, Huijser A, Mathew S, Reek JNH. Rotaxane-Functionalized Dyes for Charge-Rectification in p-Type Photoelectrochemical Devices. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2306032. [PMID: 38110821 PMCID: PMC10916627 DOI: 10.1002/advs.202306032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Indexed: 12/20/2023]
Abstract
A supramolecular photovoltaic strategy is applied to enhance power conversion efficiencies (PCE) of photoelectrochemical devices by suppressing electron-hole recombination after photoinduced electron transfer (PET). Here, the author exploit supramolecular localization of the redox mediator-in close proximity to the dye-through a rotaxane topology, reducing electron-hole recombination in p-type dye-sensitized solar cells (p-DSSCs). Dye PRotaxane features 1,5-dioxynaphthalene recognition sites (DNP-arms) with a mechanically-interlocked macrocyclic redox mediator naphthalene diimide macrocycle (3-NDI-ring), stoppering synthetically via click chemistry. The control molecule PStopper has stoppered DNP-arms, preventing rotaxane formation with the 3-NDI-ring. Transient absorption and time-resolved fluorescence spectroscopy studies show ultrafast (211 ± 7 fs and 2.92 ± 0.05 ps) PET from the dye-moiety of PRotaxane to its mechanically interlocked 3-NDI-ring-acceptor, slowing down the electron-hole recombination on NiO surfaces compared to the analogue . p-DSSCs employing PRotaxane (PCE = 0.07%) demonstrate a 30% PCE increase compared to PStopper (PCE = 0.05%) devices, combining enhancements in both open-circuit voltages (VOC = 0.43 vs 0.36 V) and short-circuit photocurrent density (JSC = -0.39 vs -0.34 mA cm-2 ). Electrochemical impedance spectroscopy shows that PRotaxane devices exhibit hole lifetimes (τh ) approaching 1 s, a 16-fold improvement compared to traditional I- /I3 - -based systems (τh = 50 ms), demonstrating the benefits obtained upon nanoengineering of interfacial dye-regeneration at the photocathode.
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Affiliation(s)
- Tessel Bouwens
- van ’t Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 904Amsterdam1098 XHThe Netherlands
| | - Tijmen M. A. Bakker
- van ’t Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 904Amsterdam1098 XHThe Netherlands
| | - Kaijian Zhu
- PhotoCatalytic Synthesis GroupMESA+ Institute for NanotechnologyUniversity of TwenteP.O. Box 217Enschede7500 AEThe Netherlands
| | - Annemarie Huijser
- PhotoCatalytic Synthesis GroupMESA+ Institute for NanotechnologyUniversity of TwenteP.O. Box 217Enschede7500 AEThe Netherlands
| | - Simon Mathew
- van ’t Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 904Amsterdam1098 XHThe Netherlands
| | - Joost N. H. Reek
- van ’t Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 904Amsterdam1098 XHThe Netherlands
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3
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Marongiu M, Ha T, Gil-Guerrero S, Garg K, Mandado M, Melle-Franco M, Diez-Perez I, Mateo-Alonso A. Molecular Graphene Nanoribbon Junctions. J Am Chem Soc 2024; 146:3963-3973. [PMID: 38305745 PMCID: PMC10870704 DOI: 10.1021/jacs.3c11340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 12/20/2023] [Accepted: 01/12/2024] [Indexed: 02/03/2024]
Abstract
One of the challenges for the realization of molecular electronics is the design of nanoscale molecular wires displaying long-range charge transport. Graphene nanoribbons are an attractive platform for the development of molecular wires with long-range conductance owing to their unique electrical properties. Despite their potential, the charge transport properties of single nanoribbons remain underexplored. Herein, we report a synthetic approach to prepare N-doped pyrene-pyrazinoquinoxaline molecular graphene nanoribbons terminated with diamino anchoring groups at each end. These terminal groups allow for the formation of stable molecular graphene nanoribbon junctions between two metal electrodes that were investigated by scanning tunneling microscope-based break-junction measurements. The experimental and computational results provide evidence of long-range tunneling charge transport in these systems characterized by a shallow conductance length dependence and electron tunneling through >6 nm molecular backbone.
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Affiliation(s)
- Mauro Marongiu
- POLYMAT, University of the Basque Country UPV/EHU, Avenida de Tolosa 72, 20018 Donostia-San Sebastian, Spain
| | - Tracy Ha
- Department
of Chemistry, Faculty of Natural & Mathematical Sciences, King’s College London, Britannia House, 7 Trinity Street, SE1 1DB London, United Kingdom
| | - Sara Gil-Guerrero
- CICECO—Aveiro
Institute of Materials, Department of Chemistry, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Kavita Garg
- Department
of Chemistry, Faculty of Natural & Mathematical Sciences, King’s College London, Britannia House, 7 Trinity Street, SE1 1DB London, United Kingdom
| | - Marcos Mandado
- Department
of Physical Chemistry, University of Vigo, Lagoas-Marcosende s/n, 36310 Vigo, Spain
| | - Manuel Melle-Franco
- CICECO—Aveiro
Institute of Materials, Department of Chemistry, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Ismael Diez-Perez
- Department
of Chemistry, Faculty of Natural & Mathematical Sciences, King’s College London, Britannia House, 7 Trinity Street, SE1 1DB London, United Kingdom
| | - Aurelio Mateo-Alonso
- POLYMAT, University of the Basque Country UPV/EHU, Avenida de Tolosa 72, 20018 Donostia-San Sebastian, Spain
- Ikerbasque, Basque
Foundation for Science, 48009 Bilbao, Spain
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4
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Escorihuela E, Del Barrio J, Davidson RJ, Beeby A, Low PJ, Prez-Murano F, Cea P, Martin S. Large area arrays of discrete single-molecule junctions derived from host-guest complexes. NANOSCALE 2024; 16:1238-1246. [PMID: 38116590 DOI: 10.1039/d3nr05122f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2023]
Abstract
The desire to continually reduce the lower limits of semiconductor integrated circuit (IC) fabrication methods continues to inspire interest in unimolecular electronics as a platform technology for the realization of future (opto)electronic devices. However, despite successes in developing methods for the construction and measurement of single-molecule and large-area molecular junctions, exercising control over the precise junction geometry remains a significant challenge. Here, host-guest complexes of the wire-like viologen derivative 1,1'-bis(4-(methylthio)-phenyl)-[4,4'-bipyridine]-1,1'-diium chloride ([1][Cl]2) and cucurbit[7]uril (CB[7]) have been self-assembled in a regular pattern over a gold substrate. Subsequently, ligandless gold nanoparticles (AuNPs) synthesized in situ are deposited over the host-guest array. The agreement between the conductance of individual mono-molecular junctions, appropriately chosen as a function of the AuNP diameter, within this array determined by conductive probe atomic force microscope (c-AFM) and true single-molecule measurements for a closely similar host-guest complex within a scanning tunneling microscope break-junction (STM-BJ) indicates the formation of molecular junctions derived from these host-guest complexes without deleterious intermolecular coupling effects.
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Affiliation(s)
- Enrique Escorihuela
- Instituto de Nanociencia y Materiales de Aragón (INMA), CSIC-Universidad de Zaragoza, 50009, Zaragoza, Spain.
- Departamento de Química Física, Universidad de Zaragoza, 50009, Zaragoza, Spain
| | - Jesús Del Barrio
- Instituto de Nanociencia y Materiales de Aragón (INMA), CSIC-Universidad de Zaragoza, 50009, Zaragoza, Spain.
- Departamento de Química Orgánica, Universidad de Zaragoza, 50009, Zaragoza, Spain
| | - Ross J Davidson
- Department of Chemistry, Durham University, South Rd, Durham, DH1 3LE, UK
| | - Andrew Beeby
- Department of Chemistry, Durham University, South Rd, Durham, DH1 3LE, UK
| | - Paul J Low
- School of Molecular Sciences, University of Western Australia, 35 Stirling Highway, Crawley, 6009, Western Australia, Australia
| | - Francesc Prez-Murano
- Institute of Microelectronics of Barcelona (IMB-CNM, CSIC), 08193, Bellaterra, Spain
| | - Pilar Cea
- Instituto de Nanociencia y Materiales de Aragón (INMA), CSIC-Universidad de Zaragoza, 50009, Zaragoza, Spain.
- Departamento de Química Física, Universidad de Zaragoza, 50009, Zaragoza, Spain
- Laboratorio de Microscopias Avanzadas (LMA), Universidad de Zaragoza, 50018, Zaragoza, Spain
| | - Santiago Martin
- Instituto de Nanociencia y Materiales de Aragón (INMA), CSIC-Universidad de Zaragoza, 50009, Zaragoza, Spain.
- Departamento de Química Física, Universidad de Zaragoza, 50009, Zaragoza, Spain
- Laboratorio de Microscopias Avanzadas (LMA), Universidad de Zaragoza, 50018, Zaragoza, Spain
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5
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Becharguia N, Wasielewski E, Abidi R, Nierengarten I, Nierengarten JF. Stepwise Functionalization of a Pillar[5]arene-Containing [2]Rotaxane with Pentafluorophenyl Ester Stoppers. Chemistry 2024; 30:e202303501. [PMID: 37983752 DOI: 10.1002/chem.202303501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 11/18/2023] [Accepted: 11/20/2023] [Indexed: 11/22/2023]
Abstract
Detailed investigations into the stepwise bis-functionalization of a pillar[5]arene-containing rotaxane building block have been carried out. Upon a first stopper exchange, the pillar[5]arene moiety of the mono-acylated product is preferentially located close to its reactive pentafluorophenyl ester stopper, thus limiting the accessibility to the reactive carbonyl group by the nucleophilic reagents. Selective mono-functionalization is thus very efficient. Introduction of a second stopper is then possible to generate dissymmetrical rotaxanes with different amide stoppers. Moreover, when dethreading is possible upon the second acylation, the pillar[5]arene plays the role of a protecting group allowing the synthesis of dissymmetrical axles that are particularly difficult to prepare under statistical conditions. Finally, detailed conformation analysis of the rotaxanes revealed that the position of the pillar[5]arene moiety on its axle subunit is mainly governed by polar interactions in nonpolar organic solvents, whereas solvophobic effects play a major role in polar solvents.
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Affiliation(s)
- Nihed Becharguia
- Laboratoire de Chimie des Matériaux Moléculaires, Université de Strasbourg et CNRS (UMR 7042 LIMA), Ecole Européenne de Chimie, Polymères et Matériaux, 25 rue Becquerel, 67087, Strasbourg Cedex 2, France
- Laboratoire d'Applications de la Chimie aux Ressources et, Substances Naturelles et l'Environnement, Faculté des Sciences de Bizerte, Université de Carthage, 7021 Zarzouna, Bizerte, Tunisia
| | - Emeric Wasielewski
- Plateforme RMN Cronenbourg, Université de Strasbourg et CNRS (UMR 7042 LIMA), Ecole Européenne de Chimie, Polymères et Matériaux, 25 rue Becquerel, 67087, Strasbourg Cedex 2, France
| | - Rym Abidi
- Laboratoire d'Applications de la Chimie aux Ressources et, Substances Naturelles et l'Environnement, Faculté des Sciences de Bizerte, Université de Carthage, 7021 Zarzouna, Bizerte, Tunisia
| | - Iwona Nierengarten
- Laboratoire de Chimie des Matériaux Moléculaires, Université de Strasbourg et CNRS (UMR 7042 LIMA), Ecole Européenne de Chimie, Polymères et Matériaux, 25 rue Becquerel, 67087, Strasbourg Cedex 2, France
| | - Jean-François Nierengarten
- Laboratoire de Chimie des Matériaux Moléculaires, Université de Strasbourg et CNRS (UMR 7042 LIMA), Ecole Européenne de Chimie, Polymères et Matériaux, 25 rue Becquerel, 67087, Strasbourg Cedex 2, France
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6
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Single-Molecule Chemical Reactions Unveiled in Molecular Junctions. Processes (Basel) 2022. [DOI: 10.3390/pr10122574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2022] Open
Abstract
Understanding chemical processes at the single-molecule scale represents the ultimate limit of analytical chemistry. Single-molecule detection techniques allow one to reveal the detailed dynamics and kinetics of a chemical reaction with unprecedented accuracy. It has also enabled the discoveries of new reaction pathways or intermediates/transition states that are inaccessible in conventional ensemble experiments, which is critical to elucidating their intrinsic mechanisms. Thanks to the rapid development of single-molecule junction (SMJ) techniques, detecting chemical reactions via monitoring the electrical current through single molecules has received an increasing amount of attention and has witnessed tremendous advances in recent years. Research efforts in this direction have opened a new route for probing chemical and physical processes with single-molecule precision. This review presents detailed advancements in probing single-molecule chemical reactions using SMJ techniques. We specifically highlight recent progress in investigating electric-field-driven reactions, reaction dynamics and kinetics, host–guest interactions, and redox reactions of different molecular systems. Finally, we discuss the potential of single-molecule detection using SMJs across various future applications.
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7
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Dhindsa JS, Cotterill EL, Buguis FL, Anghel M, Boyle PD, Gilroy JB. Blending the Optical and Redox Properties of Oligoynes and Boron Difluoride Formazanates. Angew Chem Int Ed Engl 2022; 61:e202208502. [DOI: 10.1002/anie.202208502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2022] [Indexed: 11/10/2022]
Affiliation(s)
- Jasveer S. Dhindsa
- Department of Chemistry and the Centre for Advanced Materials and Biomaterials Research (CAMBR) The University of Western Ontario London ON N6A 5B7 Canada
| | - Erin L. Cotterill
- Department of Chemistry and the Centre for Advanced Materials and Biomaterials Research (CAMBR) The University of Western Ontario London ON N6A 5B7 Canada
| | - Francis L. Buguis
- Department of Chemistry and the Centre for Advanced Materials and Biomaterials Research (CAMBR) The University of Western Ontario London ON N6A 5B7 Canada
| | - Michael Anghel
- Department of Chemistry and the Centre for Advanced Materials and Biomaterials Research (CAMBR) The University of Western Ontario London ON N6A 5B7 Canada
| | - Paul D. Boyle
- Department of Chemistry and the Centre for Advanced Materials and Biomaterials Research (CAMBR) The University of Western Ontario London ON N6A 5B7 Canada
| | - Joe B. Gilroy
- Department of Chemistry and the Centre for Advanced Materials and Biomaterials Research (CAMBR) The University of Western Ontario London ON N6A 5B7 Canada
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8
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Dhindsa JS, Cotterrill EL, Buguis FL, Anghel M, Boyle PD, Gilroy JB. Blending the Optical and Redox Properties of Oligoynes and Boron. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202208502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Jasveer S Dhindsa
- University of Western Ontario: Western University Department of Chemistry CANADA
| | - Erin L. Cotterrill
- University of Western Ontario: Western University Department of Chemistry CANADA
| | - Francis L. Buguis
- University of Western Ontario: Western University Department of Chemistry CANADA
| | - Michael Anghel
- University of Western Ontario: Western University Department of Chemistry CANADA
| | - Paul D. Boyle
- University of Western Ontario: Western University Department of Chemistry CANADA
| | - Joe B. Gilroy
- The University of Western Ontario Department of Chemistry 1151 Richmond St. N. N6A 5B7 London CANADA
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9
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Fu T, Frommer K, Nuckolls C, Venkataraman L. Single-Molecule Junction Formation in Break-Junction Measurements. J Phys Chem Lett 2021; 12:10802-10807. [PMID: 34723548 DOI: 10.1021/acs.jpclett.1c03160] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The scanning tunneling microscope-based break-junction (STM-BJ) technique is the most common method used to study the electronic properties of single-molecule junctions. It relies on repeatedly forming and rupturing a Au contact in an environment of the target molecules. The probability of junction formation is typically very high (∼70-95%), prompting questions relating to how the nanoscale structure of the Au electrode before the metal point contact ruptures alters junction formation. Here we analyze conductance traces measured with the STM-BJ setup by combining correlation analysis and multiple machine learning tools, including gradient-boosted trees and neural networks. We show that two key features describing the Au-Au contact prior to rupture determine the extent of contact relaxation (snapback) and the probability of junction formation. Importantly, our data strongly indicate that molecular junctions are formed prior to the rupture of the Au-Au contact, explaining the high probability of junction formation observed in room-temperature solution measurements.
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Affiliation(s)
- Tianren Fu
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Kathleen Frommer
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Colin Nuckolls
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Latha Venkataraman
- Department of Chemistry, Columbia University, New York, New York 10027, United States
- Department of Applied Physics and Applied Mathematics, Columbia University, New York, New York 10027, United States
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10
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Naher M, Milan DC, Al-Owaedi OA, Planje IJ, Bock S, Hurtado-Gallego J, Bastante P, Abd Dawood ZM, Rincón-García L, Rubio-Bollinger G, Higgins SJ, Agraït N, Lambert CJ, Nichols RJ, Low PJ. Molecular Structure-(Thermo)electric Property Relationships in Single-Molecule Junctions and Comparisons with Single- and Multiple-Parameter Models. J Am Chem Soc 2021; 143:3817-3829. [PMID: 33606524 DOI: 10.1021/jacs.0c11605] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The most probable single-molecule conductance of each member of a series of 12 conjugated molecular wires, 6 of which contain either a ruthenium or platinum center centrally placed within the backbone, has been determined. The measurement of a small, positive Seebeck coefficient has established that transmission through these molecules takes place by tunneling through the tail of the HOMO resonance near the middle of the HOMO-LUMO gap in each case. Despite the general similarities in the molecular lengths and frontier-orbital compositions, experimental and computationally determined trends in molecular conductance values across this series cannot be satisfactorily explained in terms of commonly discussed "single-parameter" models of junction conductance. Rather, the trends in molecular conductance are better rationalized from consideration of the complete molecular junction, with conductance values well described by transport calculations carried out at the DFT level of theory, on the basis of the Landauer-Büttiker model.
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Affiliation(s)
- Masnun Naher
- School of Molecular Sciences, University of Western Australia, 35 Stirling Highway, Crawley, Western Australia 6009, Australia
| | - David C Milan
- Department of Chemistry, University of Liverpool, Crown Street, Liverpool L69 7ZD, U.K
| | - Oday A Al-Owaedi
- Department of Laser Physics, College of Science for Girls, The University of Babylon, Hilla 51001, Iraq
| | - Inco J Planje
- Department of Chemistry, University of Liverpool, Crown Street, Liverpool L69 7ZD, U.K
| | - Sören Bock
- School of Molecular Sciences, University of Western Australia, 35 Stirling Highway, Crawley, Western Australia 6009, Australia
| | - Juan Hurtado-Gallego
- Departamento de Física de la Materia Condensada, Universidad Autónoma de Madrid, Madrid E-28049, Spain
| | - Pablo Bastante
- Departamento de Física de la Materia Condensada, Universidad Autónoma de Madrid, Madrid E-28049, Spain
| | - Zahra Murtada Abd Dawood
- Department of Laser Physics, College of Science for Girls, The University of Babylon, Hilla 51001, Iraq
| | - Laura Rincón-García
- Departamento de Física de la Materia Condensada, Universidad Autónoma de Madrid, Madrid E-28049, Spain
| | - Gabino Rubio-Bollinger
- Departamento de Física de la Materia Condensada, Universidad Autónoma de Madrid, Madrid E-28049, Spain.,Condensed Matter Physics Center (IFIMAC) and Instituto Universitario de Ciencia de Materiales "Nicolás Cabrera" (INC), Universidad Autónoma de Madrid, E-28049 Madrid, Spain
| | - Simon J Higgins
- Department of Chemistry, University of Liverpool, Crown Street, Liverpool L69 7ZD, U.K
| | - Nicolás Agraït
- Departamento de Física de la Materia Condensada, Universidad Autónoma de Madrid, Madrid E-28049, Spain.,Condensed Matter Physics Center (IFIMAC) and Instituto Universitario de Ciencia de Materiales "Nicolás Cabrera" (INC), Universidad Autónoma de Madrid, E-28049 Madrid, Spain.,Instituto Madrileño de Estudios Avanzados en Nanociencia IMDEA-Nanociencia, E-28049 Madrid, Spain
| | - Colin J Lambert
- Department of Physics, University of Lancaster, Lancaster LA1 4YB, U.K
| | - Richard J Nichols
- Department of Chemistry, University of Liverpool, Crown Street, Liverpool L69 7ZD, U.K
| | - Paul J Low
- School of Molecular Sciences, University of Western Australia, 35 Stirling Highway, Crawley, Western Australia 6009, Australia
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11
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Wang X, Ismael A, Almutlg A, Alshammari M, Al-Jobory A, Alshehab A, Bennett TLR, Wilkinson LA, Cohen LF, Long NJ, Robinson BJ, Lambert C. Optimised power harvesting by controlling the pressure applied to molecular junctions. Chem Sci 2021; 12:5230-5235. [PMID: 34163759 PMCID: PMC8179551 DOI: 10.1039/d1sc00672j] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 02/22/2021] [Indexed: 11/21/2022] Open
Abstract
A major potential advantage of creating thermoelectric devices using self-assembled molecular layers is their mechanical flexibility. Previous reports have discussed the advantage of this flexibility from the perspective of facile skin attachment and the ability to avoid mechanical deformation. In this work, we demonstrate that the thermoelectric properties of such molecular devices can be controlled by taking advantage of their mechanical flexibility. The thermoelectric properties of self-assembled monolayers (SAMs) fabricated from thiol terminated molecules were measured with a modified AFM system, and the conformation of the SAMs was controlled by regulating the loading force between the organic thin film and the probe, which changes the tilt angle at the metal-molecule interface. We tracked the thermopower shift vs. the tilt angle of the SAM and showed that changes in both the electrical conductivity and Seebeck coefficient combine to optimize the power factor at a specific angle. This optimization of thermoelectric performance via applied pressure is confirmed through the use of theoretical calculations and is expected to be a general method for optimising the power factor of SAMs.
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Affiliation(s)
- Xintai Wang
- Physics Department, Lancaster University Lancaster LA1 4YB UK
- The Blackett Laboratory, Imperial College London, South Kensington Campus London SW7 2AZ UK
| | - Ali Ismael
- Physics Department, Lancaster University Lancaster LA1 4YB UK
- Department of Physics, College of Education for Pure Science, Tikrit University Tikrit Iraq
| | - Ahmad Almutlg
- Physics Department, Lancaster University Lancaster LA1 4YB UK
| | | | - Alaa Al-Jobory
- Physics Department, Lancaster University Lancaster LA1 4YB UK
- Department of Physics, College of Science, University of Anbar Anbar Iraq
| | | | - Troy L R Bennett
- Department of Chemistry, Imperial College London, MSRH White City London W12 0BZ UK
| | - Luke A Wilkinson
- Department of Chemistry, Imperial College London, MSRH White City London W12 0BZ UK
- Department of Chemistry, University of York Heslington York YO10 5DD UK
| | - Lesley F Cohen
- The Blackett Laboratory, Imperial College London, South Kensington Campus London SW7 2AZ UK
| | - Nicholas J Long
- Department of Chemistry, Imperial College London, MSRH White City London W12 0BZ UK
| | | | - Colin Lambert
- Physics Department, Lancaster University Lancaster LA1 4YB UK
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12
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The loss of endgroup effects in long pyridyl-endcapped oligoynes on the way to carbyne. Nat Chem 2020; 12:1143-1149. [DOI: 10.1038/s41557-020-0550-0] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2020] [Accepted: 08/07/2020] [Indexed: 11/09/2022]
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13
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Zieleniewska A, Zhao X, Bauroth S, Wang C, Batsanov AS, Krick Calderon C, Kahnt A, Clark T, Bryce MR, Guldi DM. Resonance-Enhanced Charge Delocalization in Carbazole-Oligoyne-Oxadiazole Conjugates. J Am Chem Soc 2020; 142:18769-18781. [PMID: 33084308 DOI: 10.1021/jacs.0c04003] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
There are notably few literature reports of electron donor-acceptor oligoynes, even though they offer unique opportunities for studying charge transport through "all-carbon" molecular bridges. In this context, the current study focuses on a series of carbazole-(C≡C)n-2,5-diphenyl-1,3,4-oxadiazoles (n = 1-4) as conjugated π-systems in general and explores their photophysical properties in particular. Contrary to the behavior of typical electron donor-acceptor systems, for these oligoynes, the rates of charge recombination after photoexcitation increase with increasing electron donor-acceptor distance. To elucidate this unusual performance, we conducted detailed photophysical and time-dependent density functional theory investigations. Significant delocalization of the molecular orbitals along the bridge indicates that the bridging states come into resonance with either the electron donor or acceptor, thereby accelerating the charge transfer. Moreover, the calculated bond lengths reveal a reduction in bond-length alternation upon photoexcitation, indicating significant cumulenic character of the bridge in the excited state. In short, strong vibronic coupling between the electron-donating N-arylcarbazoles and the electron-accepting 1,3,4-oxadiazoles accelerates the charge recombination as the oligoyne becomes longer.
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Affiliation(s)
- Anna Zieleniewska
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials, Friedrich-Alexander-Universität Erlangen-Nürnberg, Egerlandstrasse 3, Erlangen 91058, Germany
| | - Xiaotao Zhao
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Stefan Bauroth
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials, Friedrich-Alexander-Universität Erlangen-Nürnberg, Egerlandstrasse 3, Erlangen 91058, Germany
| | - Changsheng Wang
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Andrei S Batsanov
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Christina Krick Calderon
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials, Friedrich-Alexander-Universität Erlangen-Nürnberg, Egerlandstrasse 3, Erlangen 91058, Germany
| | - Axel Kahnt
- Leibniz Institute of Surface Engineering (IOM), Permoserstrasse 15, Leipzig 04318, Germany
| | - Timothy Clark
- Computer Chemistry Center, Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials, Friedrich-Alexander-Universität Erlangen-Nürnberg, Egerlandstrasse 3, Erlangen 91052, Germany
| | - Martin R Bryce
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Dirk M Guldi
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials, Friedrich-Alexander-Universität Erlangen-Nürnberg, Egerlandstrasse 3, Erlangen 91058, Germany
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14
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Ismael AK, Lambert CJ. Molecular-scale thermoelectricity: a worst-case scenario. NANOSCALE HORIZONS 2020; 5:1073-1080. [PMID: 32432630 DOI: 10.1039/d0nh00164c] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
This article highlights a novel strategy for designing molecules with high thermoelectric performance, which are resilient to fluctuations. In laboratory measurements of thermoelectric properties of single-molecule junctions and self-assembled monolayers, fluctuations in frontier orbital energies relative to the Fermi energy EF of electrodes are an important factor, which determine average values of transport coefficients, such as the average Seebeck coefficient 〈S〉. In a worst-case scenario, where the relative value of EF fluctuates uniformly over the HOMO-LUMO gap, a "worst-case scenario theorem" tells us that the average Seebeck coefficient will vanish unless the transmission coefficient at the LUMO and HOMO resonances take different values. This implies that junction asymmetry is a necessary condition for obtaining non-zero values of 〈S〉 in the presence of large fluctuations. This conclusion that asymmetry can drive high thermoelectric performance is supported by detailed simulations on 17 molecules using density functional theory. Importantly, junction asymmetry does not imply that the molecules themselves should be asymmetric. We demonstrate that symmetric molecules possessing a localised frontier orbital can achieve even higher thermoelectric performance than asymmetric molecules, because under laboratory conditions of slight symmetry breaking, such orbitals are 'silent' and do not contribute to transport. Consequently, transport is biased towards the nearest "non-silent" frontier orbital and leads to a high ensemble averaged Seebeck coefficient. This effect is demonstrated for a spatially-symmetric 1,2,3-triazole-based molecule, a rotaxane-hexayne macrocycle and a phthalocyanine.
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Affiliation(s)
- Ali K Ismael
- Department of Physics, Lancaster University, Lancaster LA1 4YB, UK.
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15
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Wu C, Alqahtani A, Sangtarash S, Vezzoli A, Sadeghi H, Robertson CM, Cai C, Lambert CJ, Higgins SJ, Nichols RJ. In situ formation of H-bonding imidazole chains in break-junction experiments. NANOSCALE 2020; 12:7914-7920. [PMID: 32232235 DOI: 10.1039/d0nr00630k] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
As a small molecule possessing both strong H-bond donor and acceptor functions, 1H-imidazole can participate in extensive homo- or heteromolecular H-bonding networks. These properties are important in Nature, as imidazole moieties are incorporated in many biologically-relevant compounds. Imidazole also finds applications ranging from corrosion inhibition to fire retardants and photography. We have found a peculiar behaviour of imidazole during scanning tunnelling microscopy-break junction (STM-BJ) experiments, in which oligomeric chains connect the two electrodes and allow efficient charge transport. We attributed this behaviour to the formation of hydrogen-bonding networks, as no evidence of such behaviour was found in 1-methylimidazole (incapable of participating in intramolecular hydrogen bonding). The results are supported by DFT calculations, which confirmed our hypothesis. These findings pave the road to the use of hydrogen-bonding networks for the fabrication of dynamic junctions based on supramolecular interactions.
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Affiliation(s)
- Chuanli Wu
- Department of Chemistry, University of Liverpool, Crown Street, Liverpool L69 7ZD, UK.
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16
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Scaccabarozzi A, Milani A, Peggiani S, Pecorario S, Sun B, Tykwinski RR, Caironi M, Casari CS. A Field-Effect Transistor Based on Cumulenic sp-Carbon Atomic Wires. J Phys Chem Lett 2020; 11:1970-1974. [PMID: 32067464 PMCID: PMC7065831 DOI: 10.1021/acs.jpclett.0c00141] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Carbyne and linear carbon structures based on sp-hybridization are attractive targets as the ultimate one-dimensional system (i.e., one-atom in diameter) featuring wide tunability of optical and electronic properties. Two possible structures exist for sp-carbon atomic wires: (a) the polyynes with alternated single-triple bonds and (b) the cumulenes with contiguous double bonds. Theoretical studies predict semiconducting behavior for polyynes, while cumulenes are expected to be metallic. Very limited experimental work, however, has been directed toward investigating the electronic properties of these structures, mostly at the single-molecule or monolayer level. However, sp-carbon atomic wires hold great potential for solution-processed thin-film electronics, an avenue not exploited to date. Herein, we report the first field-effect transistor (FET) fabricated employing cumulenic sp-carbon atomic wires as a semiconductor material. Our proof-of-concept FET device is easily fabricated by solution drop casting and paves the way for exploiting sp-carbon atomic wires as active electronic materials.
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Affiliation(s)
- Alberto
D. Scaccabarozzi
- Center
for Nano Science and Technology@PoliMi, Istituto Italiano di Tecnologia, via Giovanni Pascoli 70/3, Milan 20133, Italy
| | - Alberto Milani
- Micro
and Nanostructured Materials Lab NanoLab, Department of Energy, Politecnico di Milano, Via Ponzio 34/3, 20133 Milano, Italy
| | - Sonia Peggiani
- Micro
and Nanostructured Materials Lab NanoLab, Department of Energy, Politecnico di Milano, Via Ponzio 34/3, 20133 Milano, Italy
| | - Stefano Pecorario
- Center
for Nano Science and Technology@PoliMi, Istituto Italiano di Tecnologia, via Giovanni Pascoli 70/3, Milan 20133, Italy
- Micro
and Nanostructured Materials Lab NanoLab, Department of Energy, Politecnico di Milano, Via Ponzio 34/3, 20133 Milano, Italy
| | - Bozheng Sun
- Department
of Chemistry, University of Alberta, Edmonton, Alberta, Canada T6G 2G2
| | - Rik R. Tykwinski
- Department
of Chemistry, University of Alberta, Edmonton, Alberta, Canada T6G 2G2
| | - Mario Caironi
- Center
for Nano Science and Technology@PoliMi, Istituto Italiano di Tecnologia, via Giovanni Pascoli 70/3, Milan 20133, Italy
- E-mail:
| | - Carlo S. Casari
- Micro
and Nanostructured Materials Lab NanoLab, Department of Energy, Politecnico di Milano, Via Ponzio 34/3, 20133 Milano, Italy
- E-mail:
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17
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Nojo W, Tamaoki H, Ishigaki Y, Katoono R, Fujiwara K, Fukushima T, Suzuki T. Molecular Wires with Controllable π-Delocalization Incorporating Redox-Triggered π-Conjugated Switching Units. Chempluschem 2020; 84:634-642. [PMID: 31944008 DOI: 10.1002/cplu.201800341] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Indexed: 11/11/2022]
Abstract
A perfluorobiphenyl-2,2'-diyl dication and its corresponding dihydrophenanthrene-type electron donor are interconvertible upon two-electron transfer. Redox-triggered C-C bond-formation/cleavage caused a drastic change in the torsion angle of the biphenyl unit. Thus, π-delocalization ON/OFF switching was observed as a change in the UV absorption upon electrolysis of the linearly extended analogue with two phenylethynyl groups. A further extended π-system with a molecular length of ca. 3.5 nm, which has two switching units, was synthesized. Spectroelectrograms as well as voltammetric analyses showed that the two units act nearly simultaneously because of the very small inter-unit electrostatic repulsion in the tetracationic state. Thus, the present pair is a promising candidate as a switching unit for "molecular wires" with controllable π-delocalization, in which a higher ON/OFF ratio of delocalization could be realized by incorporating multiple switching units.
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Affiliation(s)
- Wataru Nojo
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo, 060-0810, Japan
| | - Hitomi Tamaoki
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo, 060-0810, Japan
| | - Yusuke Ishigaki
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo, 060-0810, Japan
| | - Ryo Katoono
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo, 060-0810, Japan
| | - Kenshu Fujiwara
- Department of Life Science, Graduate School of Engineering, Akita University, Akita, 010-8502, Japan
| | - Takanori Fukushima
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama, 226-8503, Japan
| | - Takanori Suzuki
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo, 060-0810, Japan
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18
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Amini H, Baranová Z, Weisbach N, Gauthier S, Bhuvanesh N, Reibenspies JH, Gladysz JA. Syntheses, Structures, and Spectroscopic Properties of 1,10-Phenanthroline-Based Macrocycles Threaded by PtC 8 Pt, PtC 12 Pt, and PtC 16 Pt Axles: Metal-Capped Rotaxanes as Insulated Molecular Wires. Chemistry 2019; 25:15896-15914. [PMID: 31596000 DOI: 10.1002/chem.201903927] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Revised: 10/01/2019] [Indexed: 11/05/2022]
Abstract
The platinum polyynyl complexes trans-(C6 F5 )(p-tol3 P)2 Pt(C≡C)n/2 H undergo oxidative homocoupling (O2 , CuCl/TMEDA) to diplatinum polyynediyl complexes trans, trans-(C6 F5 )(p-tol3 P)2 Pt(C≡C)n Pt(Pp-tol3 )2 (C6 F5 ) (n=4, 2; 6, 5; 8, 8; 92-97 %) as reported previously. When related reactions are conducted in the presence of CuI adducts of the 1,10-phenanthroline-based macrocycles 2,9-(1,10-phenanthrolinediyl)(p-C6 H4 O(CH2 )6 O)2 (1,3-C6 H4 ) (10, 33-membered) or 2,9-(1,10-phenanthrolinediyl)(p-C6 H4 O(CH2 )6 O)2 (2,7-naphthalenediyl) (11, 35-membered), excess K2 CO3 , and I2 (oxidant), rotaxanes are isolated that feature a Pt(C≡C)n Pt axle that has been threaded through the macrocycle (2⋅10, 9 %; 5⋅10, 41 %; 5⋅11, 28 %; 8⋅10, 12 %; 8⋅11, 9 %). Their crystal structures are determined and analyzed in detail, particularly with respect to geometric perturbations and the degree of steric sp carbon chain insulation. NMR spectra show a number of shielding effects. UV/Vis spectra do not indicate significant electronic interactions between the Pt(C≡C)n Pt axles and macrocycles, although cyclic voltammetry data suggest rapid reactions following oxidation.
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Affiliation(s)
- Hashem Amini
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas, 77842-3012, USA
| | - Zuzana Baranová
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas, 77842-3012, USA
| | - Nancy Weisbach
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas, 77842-3012, USA
| | - Sébastien Gauthier
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas, 77842-3012, USA
| | - Nattamai Bhuvanesh
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas, 77842-3012, USA
| | - Joseph H Reibenspies
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas, 77842-3012, USA
| | - John A Gladysz
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas, 77842-3012, USA
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19
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Schröder HV, Schalley CA. Electrochemically switchable rotaxanes: recent strides in new directions. Chem Sci 2019; 10:9626-9639. [PMID: 32110308 PMCID: PMC7020790 DOI: 10.1039/c9sc04118d] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2019] [Accepted: 10/03/2019] [Indexed: 12/13/2022] Open
Abstract
Are they still electrifying? Electrochemically switchable rotaxanes are well known for their ability to efficiently undergo changes of (co-)conformation and properties under redox-control. Thus, these mechanically interlocked assemblies represent an auspicious liaison between the fields of molecular switches and molecular electronics. Since the first reported example of a redox-switchable molecular shuttle in 1994, improved tools of organic and supramolecular synthesis have enabled sophisticated new architectures, which provide precise control over properties and function. This perspective covers recent advances in the area of electrochemically active rotaxanes including novel molecular switches and machines, metal-containing rotaxanes, non-equilibrium systems and potential applications.
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Affiliation(s)
- Hendrik V Schröder
- Institut für Chemie und Biochemie , Freie Universität Berlin , Takustr. 3 , 14195 Berlin , Germany .
| | - Christoph A Schalley
- Institut für Chemie und Biochemie , Freie Universität Berlin , Takustr. 3 , 14195 Berlin , Germany .
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20
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Understanding resonant charge transport through weakly coupled single-molecule junctions. Nat Commun 2019; 10:4628. [PMID: 31604934 PMCID: PMC6789103 DOI: 10.1038/s41467-019-12625-4] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2018] [Accepted: 09/20/2019] [Indexed: 11/24/2022] Open
Abstract
Off-resonant charge transport through molecular junctions has been extensively studied since the advent of single-molecule electronics and is now well understood within the framework of the non-interacting Landauer approach. Conversely, gaining a qualitative and quantitative understanding of the resonant transport regime has proven more elusive. Here, we study resonant charge transport through graphene-based zinc-porphyrin junctions. We experimentally demonstrate an inadequacy of non-interacting Landauer theory as well as the conventional single-mode Franck–Condon model. Instead, we model overall charge transport as a sequence of non-adiabatic electron transfers, with rates depending on both outer and inner-sphere vibrational interactions. We show that the transport properties of our molecular junctions are determined by a combination of electron–electron and electron-vibrational coupling, and are sensitive to interactions with the wider local environment. Furthermore, we assess the importance of nuclear tunnelling and examine the suitability of semi-classical Marcus theory as a description of charge transport in molecular devices. The mechanism of nonadiabatic electron transfer in molecular systems is an important research topic for understanding various chemical reactions. Thomas et al. quantify resonant charge transport through single-molecule junctions as a model system for examining quantum and Marcus theories.
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21
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Single-molecule level control of host-guest interactions in metallocycle-C 60 complexes. Nat Commun 2019; 10:4599. [PMID: 31601813 PMCID: PMC6787074 DOI: 10.1038/s41467-019-12534-6] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2018] [Accepted: 09/16/2019] [Indexed: 12/18/2022] Open
Abstract
Host−guest interactions are of central importance in many biological and chemical processes. However, the investigation of the formation and decomplexation of host−guest systems at the single-molecule level has been a challenging task. Here we show that the single-molecule conductance of organoplatinum(II) metallocycle hosts can be enhanced by an order of magnitude by the incorporation of a C60 guest molecule. Mechanically stretching the metallocycle-C60 junction with a scanning tunneling microscopy break junction technique causes the release of the C60 guest from the metallocycle, and consequently the conductance switches back to the free-host level. Metallocycle hosts with different shapes and cavity sizes show different degrees of flexibility to accommodate the C60 guest in response to mechanical stretching. DFT calculations provide further insights into the electronic structures and charge transport properties of the molecular junctions based on metallocycles and the metallocycle-C60 complexes. Studying the single-molecule behavior of host-guest complexes can provide fundamental insights into their supramolecular interactions. Here, the authors use the scanning tunneling microscopy break junction technique to show that encapsulation of a C60 molecule significantly enhances the conductance of an organoplatinum metallocycle; mechanical stretching of the junction releases the guest, returning the conductance to free-host level.
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22
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Garner MH, Jensen A, Hyllested LOH, Solomon GC. Helical orbitals and circular currents in linear carbon wires. Chem Sci 2019; 10:4598-4608. [PMID: 31123570 PMCID: PMC6496982 DOI: 10.1039/c8sc05464a] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Accepted: 03/14/2019] [Indexed: 01/07/2023] Open
Abstract
Disubstituted odd-carbon cumulenes are linear carbon wires with helical π-orbitals, which results in circular current around the wire.
Disubstituted odd-carbon cumulenes are linear carbon wires with near-degenerate helical π-orbitals. Such cumulenes are chiral molecules but their electronic structure consists of helical orbitals of both chiralities. For these helical molecular orbitals to give rise to experimentally observable effects, the near-degenerate orbitals of opposite helicities must be split. Here we show how pyramidalized single-faced π-donors, such as the amine substituent, provide a strategy for splitting the helical molecular orbitals. The chirality induced by the amine substituents allow for systematic control of the helicity of the frontier orbitals. We examine how the helical orbitals in odd-carbon cumulenes control the coherent electron transport properties, and we explicitly predict two modes in the experimental single-molecule conductance for these molecules. We also show that the current density through these linear wires exhibits strong circular currents. The direction of the circular currents is systematically controlled by the helicity of the frontier molecular orbitals, and is therefore altered by changing between the conformations of the molecule. Furthermore, the circular currents are subject to a full ring-reversal around antiresonances in the Landauer transmission, emphasizing the relation to destructive quantum interference. With circular currents present around truly linear carbon wires, cumulenes are promising candidates for novel applications in molecular electronics.
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Affiliation(s)
- Marc H Garner
- Department of Chemistry , Nano-Science Center , University of Copenhagen , Universitetsparken 5 , DK-2100 , Copenhagen Ø , Denmark . ;
| | - Anders Jensen
- Department of Chemistry , Nano-Science Center , University of Copenhagen , Universitetsparken 5 , DK-2100 , Copenhagen Ø , Denmark . ;
| | - Louise O H Hyllested
- Department of Chemistry , Nano-Science Center , University of Copenhagen , Universitetsparken 5 , DK-2100 , Copenhagen Ø , Denmark . ;
| | - Gemma C Solomon
- Department of Chemistry , Nano-Science Center , University of Copenhagen , Universitetsparken 5 , DK-2100 , Copenhagen Ø , Denmark . ;
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23
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Franz M, Januszewski JA, Hampel F, Tykwinski RR. [3]Rotaxanes with Mixed Axles: Polyynes and Cumulenes. European J Org Chem 2019. [DOI: 10.1002/ejoc.201900188] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Michael Franz
- Department of Chemistry and Pharmacy & Interdisciplinary Center of Molecular Materials (ICMM); University of Erlangen-Nuremberg (FAU); Nikolaus-Fiebiger-Strasse 10 91058 Erlangen Germany
| | - Johanna A. Januszewski
- Department of Chemistry and Pharmacy & Interdisciplinary Center of Molecular Materials (ICMM); University of Erlangen-Nuremberg (FAU); Nikolaus-Fiebiger-Strasse 10 91058 Erlangen Germany
| | - Frank Hampel
- Department of Chemistry and Pharmacy & Interdisciplinary Center of Molecular Materials (ICMM); University of Erlangen-Nuremberg (FAU); Nikolaus-Fiebiger-Strasse 10 91058 Erlangen Germany
| | - Rik R. Tykwinski
- Department of Chemistry; University of Alberta; Edmonton Alberta T6G 2G Canada
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24
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Pigulski B, Gulia N, Szafert S. Reactivity of Polyynes: Complex Molecules from Simple Carbon Rods. European J Org Chem 2019. [DOI: 10.1002/ejoc.201801350] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Bartłomiej Pigulski
- Faculty of Chemistry; University of Wrocław; F. Joliot-Curie 14 50-383 Wrocław Poland
| | - Nurbey Gulia
- Faculty of Chemistry; University of Wrocław; F. Joliot-Curie 14 50-383 Wrocław Poland
| | - Sławomir Szafert
- Faculty of Chemistry; University of Wrocław; F. Joliot-Curie 14 50-383 Wrocław Poland
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25
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Pigulski B, Jarszak A, Szafert S. Selective synthesis of iridium(iii) end-capped polyynes by oxidative addition of 1-iodopolyynes to Vaska's complex. Dalton Trans 2018; 47:17046-17054. [PMID: 30460964 DOI: 10.1039/c8dt04219e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
The reaction of bis(triphenylphosphine)iridium(i) carbonyl chloride (Vaska's complex) with a series of 1-iodopolyynes (1-CnI and 2-CnI) gave σ-polyynyl iridium(iii) complexes with general formula R(C[triple bond, length as m-dash]C)nIr(PPh3)2(Cl)(I)(CO). The use of acetonitrile as a solvent appeared crucial and allowed selectively obtaining only one from a few possible isomers. The X-ray single crystal diffraction experiment for 2-C4[Ir]I allowed the determination of the exact structure of this complex. Further spectroscopic measurements, especially 31P NMR, confirmed the formation of the same type of isomers with trans coordinated phosphines in each case. All complexes were fully characterized with the use of NMR (1H, 13C and 31P), IR, UV/Vis, cyclic voltammetry and (ESI)HRMS techniques. Moreover, DFT calculations were performed for all the resulting species. The complexes with a linear carbon chain from butadiyne to decapentayne are the longest iridium end-capped polyynes known to date since only compounds with a (C[triple bond, length as m-dash]C)2 structural motif have been reported so far. Moreover, we confirmed that the synthetic approach, first used for palladium(ii) end-capped polyynes, may be also applied for the synthesis of other structurally new organometallic polyynes.
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Affiliation(s)
- Bartłomiej Pigulski
- Faculty of Chemistry, University of Wrocław, 14 F. Joliot-Curie, 50-383 Wrocław, Poland.
| | - Agata Jarszak
- Faculty of Chemistry, University of Wrocław, 14 F. Joliot-Curie, 50-383 Wrocław, Poland.
| | - Sławomir Szafert
- Faculty of Chemistry, University of Wrocław, 14 F. Joliot-Curie, 50-383 Wrocław, Poland.
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26
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Moneo A, González-Orive A, Bock S, Fenero M, Herrer IL, Milan DC, Lorenzoni M, Nichols RJ, Cea P, Perez-Murano F, Low PJ, Martin S. Towards molecular electronic devices based on 'all-carbon' wires. NANOSCALE 2018; 10:14128-14138. [PMID: 29999063 DOI: 10.1039/c8nr02347f] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Nascent molecular electronic devices based on linear 'all-carbon' wires attached to gold electrodes through robust and reliable C-Au contacts are prepared via efficient in situ sequential cleavage of trimethylsilyl end groups from an oligoyne, Me3Si-(C[triple bond, length as m-dash]C)4-SiMe3 (1). In the first stage of the fabrication process, removal of one trimethylsilyl (TMS) group in the presence of a gold substrate, which ultimately serves as the bottom electrode, using a stoichiometric fluoride-driven process gives a highly-ordered monolayer, Au|C[triple bond, length as m-dash]CC[triple bond, length as m-dash]CC[triple bond, length as m-dash]CC[triple bond, length as m-dash]CSiMe3 (Au|C8SiMe3). In the second stage, treatment of Au|C8SiMe3 with excess fluoride results in removal of the remaining TMS protecting group to give a modified monolayer Au|C[triple bond, length as m-dash]CC[triple bond, length as m-dash]CC[triple bond, length as m-dash]CC[triple bond, length as m-dash]CH (Au|C8H). The reactive terminal C[triple bond, length as m-dash]C-H moiety in Au|C8H can be modified by 'click' reactions with (azidomethyl)ferrocene (N3CH2Fc) to introduce a redox probe, to give Au|C6C2N3HCH2Fc. Alternatively, incubation of the modified gold substrate supported monolayer Au|C8H in a solution of gold nanoparticles (GNPs), results in covalent attachment of GNPs on top of the film via a second alkynyl carbon-Au σ-bond, to give structures Au|C8|GNP in which the monolayer of linear, 'all-carbon' C8 chains is sandwiched between two macroscopic gold contacts. The covalent carbon-surface bond as well as the covalent attachment of the metal particles to the monolayer by cleavage of the alkyne C-H bond is confirmed by surface-enhanced Raman scattering (SERS). The integrity of the carbon chain in both Au|C6C2N3HCH2Fc systems and after formation of the gold top-contact electrode in Au|C8|GNP is demonstrated through electrochemical methods. The electrical properties of these nascent metal-monolayer-metal devices Au|C8|GNP featuring 'all-carbon' molecular wires were characterised by sigmoidal I-V curves, indicative of well-behaved junctions free of short circuits.
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Affiliation(s)
- Andrea Moneo
- Departamento de Química Física, Facultad de Ciencias, Universidad de Zaragoza, 50009, Spain.
| | - Alejandro González-Orive
- Departamento de Química Física, Facultad de Ciencias, Universidad de Zaragoza, 50009, Spain. and Instituto de Nanociencia de Aragón (INA) and Laboratorio de Microscopías Avanzadas (LMA), edificio i+d Campus Rio Ebro, Universidad de Zaragoza, C/Mariano Esquillor, s/n, 50018 Zaragoza, Spain
| | - Sören Bock
- School of Molecular Sciences, University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
| | - Marta Fenero
- Departamento de Química Física, Facultad de Ciencias, Universidad de Zaragoza, 50009, Spain. and Instituto de Nanociencia de Aragón (INA) and Laboratorio de Microscopías Avanzadas (LMA), edificio i+d Campus Rio Ebro, Universidad de Zaragoza, C/Mariano Esquillor, s/n, 50018 Zaragoza, Spain
| | - I Lucía Herrer
- Departamento de Química Física, Facultad de Ciencias, Universidad de Zaragoza, 50009, Spain. and Instituto de Nanociencia de Aragón (INA) and Laboratorio de Microscopías Avanzadas (LMA), edificio i+d Campus Rio Ebro, Universidad de Zaragoza, C/Mariano Esquillor, s/n, 50018 Zaragoza, Spain
| | - David C Milan
- Department of Chemistry, University of Liverpool, Liverpool, L69 7ZD, UK
| | - Matteo Lorenzoni
- Instituto de Microelectrónica de Barcelona (IMB-CNM, CSIC), Campus UAB, 08193 Bellaterra, Spain
| | - Richard J Nichols
- Department of Chemistry, University of Liverpool, Liverpool, L69 7ZD, UK
| | - Pilar Cea
- Departamento de Química Física, Facultad de Ciencias, Universidad de Zaragoza, 50009, Spain. and Instituto de Nanociencia de Aragón (INA) and Laboratorio de Microscopías Avanzadas (LMA), edificio i+d Campus Rio Ebro, Universidad de Zaragoza, C/Mariano Esquillor, s/n, 50018 Zaragoza, Spain
| | - Francesc Perez-Murano
- Instituto de Microelectrónica de Barcelona (IMB-CNM, CSIC), Campus UAB, 08193 Bellaterra, Spain
| | - Paul J Low
- School of Molecular Sciences, University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
| | - Santiago Martin
- Departamento de Química Física, Facultad de Ciencias, Universidad de Zaragoza, 50009, Spain. and Instituto de Ciencias de Materiales de Aragón (ICMA), Universidad de Zaragoza-CSIC, 50009 Zaragoza, Spain
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27
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Tanaka Y, Kato Y, Tada T, Fujii S, Kiguchi M, Akita M. “Doping” of Polyyne with an Organometallic Fragment Leads to Highly Conductive Metallapolyyne Molecular Wire. J Am Chem Soc 2018; 140:10080-10084. [DOI: 10.1021/jacs.8b04484] [Citation(s) in RCA: 61] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Yuya Tanaka
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan
| | - Yuya Kato
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan
| | - Tomofumi Tada
- Materials Research Center for Element Strategy, Tokyo Institute of Technology, Yokohama 226-8503, Japan
| | - Shintaro Fujii
- Department of Chemistry, School of Science, Tokyo Institute of Technology, Ookayama, Tokyo 152-8551, Japan
| | - Manabu Kiguchi
- Department of Chemistry, School of Science, Tokyo Institute of Technology, Ookayama, Tokyo 152-8551, Japan
| | - Munetaka Akita
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan
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28
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Peng LL, Chen F, Hong ZW, Zheng JF, Fillaud L, Yuan Y, Huang ML, Shao Y, Zhou XS, Chen JZ, Maisonhaute E. Precise tuning of single molecule conductance in an electrochemical environment. NANOSCALE 2018; 10:7026-7032. [PMID: 29611859 DOI: 10.1039/c8nr00625c] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Tuning of molecular conductance in a liquid environment is a hot topic in molecular electronics. In this article, we explore a new concept where the Fermi level positions of the metallic ends are varied simply by modifying the electroactive salt concentration in solution. We rely on the electrochemical scanning tunneling microscope break junction method that allows the construction in solution of copper atomic contacts that can be then bridged by single molecules. The experimental conductance evolution is first confronted with an analytical formulation that allows the deduction of the molecule's LUMO position and electronic coupling factors. These parameters are in close agreement with those obtained by independent DFT calculations.
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Affiliation(s)
- L-L Peng
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua, Zhejiang 321004, China.
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29
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Brooke RJ, Szumski DS, Vezzoli A, Higgins SJ, Nichols RJ, Schwarzacher W. Dual Control of Molecular Conductance through pH and Potential in Single-Molecule Devices. NANO LETTERS 2018; 18:1317-1322. [PMID: 29357253 DOI: 10.1021/acs.nanolett.7b04995] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
One of the principal aims of single-molecule electronics is to create practical devices out of individual molecules. Such devices are expected to play a particularly important role as novel sensors thanks to their response to wide ranging external stimuli. Here we show that the conductance of a molecular junction can depend on two independent stimuli simultaneously. Using a scanning tunnelling microscope break-junction technique (STM-BJ), we found that the conductance of 4,4'-vinylenedipyridine (44VDP) molecular junctions with Ni contacts depends on both the electrochemically applied gate voltage and the pH of the environment. Hence, not only can the Ni|44VDP|Ni junction function as a pH-sensitive switch, but the value of the pH at which switching takes place can be tuned electrically. Furthermore, through the simultaneous control of pH and potential the STM-BJ technique delivers unique insight into the acid-base reaction, including the observation of discrete proton transfers to and from a single molecule.
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Affiliation(s)
- Richard J Brooke
- H. H. Wills Physics Laboratory, University of Bristol , Tyndall Avenue, Bristol BS8 1TL, United Kingdom
| | - Doug S Szumski
- H. H. Wills Physics Laboratory, University of Bristol , Tyndall Avenue, Bristol BS8 1TL, United Kingdom
| | - Andrea Vezzoli
- Department of Chemistry, University of Liverpool , Crown Street, Liverpool L69 7ZD, United Kingdom
| | - Simon J Higgins
- Department of Chemistry, University of Liverpool , Crown Street, Liverpool L69 7ZD, United Kingdom
| | - Richard J Nichols
- Department of Chemistry, University of Liverpool , Crown Street, Liverpool L69 7ZD, United Kingdom
| | - Walther Schwarzacher
- H. H. Wills Physics Laboratory, University of Bristol , Tyndall Avenue, Bristol BS8 1TL, United Kingdom
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30
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Abstract
The buta-1,3-diyne synthon 1,4-bis(trimethylsilyl)buta-1,3-diyne (1) is an important building block for the introduction of butadiyne motifs into organic and organometallic structures. Although 1 is commonly prepared from the Hay homo-coupling of trimethylsilylacetylene (catalytic CuI/tetramethylethynylenediamine, O2, acetone), the report of a significant explosion during this preparation, likely arising from a static discharge during addition of the catalyst solution to the alkyne/acetone/O2 rich atmosphere, prompts consideration of alternative procedures. Here we report the use of the robust Navale catalyst system (CuI/N,N-dimethylaminopyridine, O2, NCMe) in the multigram-scale preparation of 1 with minimal manipulation of all-glass apparatus, greatly simplifying the process and minimising risks associated with the preparation of this useful compound.
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31
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33
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Masai H, Fujihara T, Tsuji Y, Terao J. Programmed Synthesis of Molecular Wires with Fixed Insulation and Defined Length Based on Oligo(phenylene ethynylene) and Permethylated α-Cyclodextrins. Chemistry 2017; 23:15073-15079. [DOI: 10.1002/chem.201701428] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2017] [Indexed: 12/24/2022]
Affiliation(s)
- Hiroshi Masai
- Department of Energy and Hydrocarbon Chemistry; Graduate School of Engineering; Kyoto University; Kyoto 615-8510 Japan
- Present address: Graduate School of Frontier Sciences; The University of Tokyo; Chiba 277-8561 Japan
| | - Tetsuaki Fujihara
- Department of Energy and Hydrocarbon Chemistry; Graduate School of Engineering; Kyoto University; Kyoto 615-8510 Japan
| | - Yasushi Tsuji
- Department of Energy and Hydrocarbon Chemistry; Graduate School of Engineering; Kyoto University; Kyoto 615-8510 Japan
| | - Jun Terao
- Department of Basic Science; Graduate School of Art and Sciences; The University of Tokyo; Tokyo 153-8902 Japan
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34
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Yamazaki Y, Mutoh Y, Saito S. Synthesis of Interlocked Compounds by Utilizing Bond-forming Reactions Mediated by Macrocyclic Phenanthroline-Cu Complexes. CHEM LETT 2017. [DOI: 10.1246/cl.170031] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Yukari Yamazaki
- Department of Chemistry, Faculty of Science, Tokyo University of Science, Kagurazaka, Shinjuku, Tokyo 162-8601
| | - Yuichiro Mutoh
- Department of Chemistry, Faculty of Science, Tokyo University of Science, Kagurazaka, Shinjuku, Tokyo 162-8601
| | - Shinichi Saito
- Department of Chemistry, Faculty of Science, Tokyo University of Science, Kagurazaka, Shinjuku, Tokyo 162-8601
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