1
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Yang H, Ji G, Choi M, Park S, An H, Lee HT, Jeong J, Park YD, Kim K, Park N, Jeong J, Kim DS, Park HR. Suppressed terahertz dynamics of water confined in nanometer gaps. SCIENCE ADVANCES 2024; 10:eadm7315. [PMID: 38657066 PMCID: PMC11042745 DOI: 10.1126/sciadv.adm7315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Accepted: 03/21/2024] [Indexed: 04/26/2024]
Abstract
Nanoconfined waters exhibit low static permittivity mainly due to interfacial effects that span about one nanometer. The characteristic length scale may be much longer in the terahertz (THz) regime where long-range collective dynamics occur; however, the THz dynamics have been largely unexplored because of the lack of a robust platform. Here, we use metallic loop nanogaps to sharply enhance light-matter interactions and precisely measure real and imaginary THz refractive indices of nanoconfined water at gap widths ranging from 2 to 20 nanometers, spanning mostly interfacial waters all the way to quasi-bulk waters. We find that, in addition to the well-known interfacial effect, the confinement effect also contributes substantially to the decrease in the complex refractive indices of the nanoconfined water by cutting off low-energy vibrational modes, even at gap widths as large as 10 nanometers. Our findings provide valuable insights into the collective dynamics of water molecules which is crucial to understanding water-mediated processes.
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Affiliation(s)
- Hyosim Yang
- Department of Physics, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea
| | - Gangseon Ji
- Department of Physics, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea
| | - Min Choi
- Department of Chemistry, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea
| | - Seondo Park
- Department of Physics and Astronomy, Seoul National University, Seoul 08826, Republic of Korea
| | - Hyeonjun An
- Department of Physics, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea
| | - Hyoung-Taek Lee
- Department of Physics, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea
| | - Joonwoo Jeong
- Department of Physics, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea
| | - Yun Daniel Park
- Department of Physics and Astronomy, Seoul National University, Seoul 08826, Republic of Korea
| | - Kyungwan Kim
- Department of Physics, Chungbuk National University, Cheongju 28644, Republic of Korea
| | - Noejung Park
- Department of Physics, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea
| | - Jeeyoon Jeong
- Department of Physics and Institute for Quantum Convergence Technology, Kangwon National University, Chuncheon 24341, Republic of Korea
| | - Dai-Sik Kim
- Department of Physics, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea
- Department of Physics and Astronomy, Seoul National University, Seoul 08826, Republic of Korea
| | - Hyeong-Ryeol Park
- Department of Physics, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea
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2
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Novelli F. Terahertz spectroscopy of thick and diluted water solutions. OPTICS EXPRESS 2024; 32:11041-11056. [PMID: 38570962 DOI: 10.1364/oe.510393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Accepted: 01/16/2024] [Indexed: 04/05/2024]
Abstract
While bright terahertz sources are used to perform nonlinear experiments, they can be advantageous for high-precision linear measurements of opaque samples. By placing the sample away from the focus, nonlinearities can be suppressed, and sizeable amounts of transmitted radiation detected. Here, this approach is demonstrated for a 0.5 mm thick layer of liquid water in a static sample holder. Variations of the index of refraction as small as (7 ± 2) · 10-4 were detected at 0.58 THz for an aqueous salt solution containing ten millimoles of sodium chloride. To my knowledge, this precision is unprecedented in time-domain spectroscopy studies of diluted aqueous systems or other optically thick and opaque materials.
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3
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Alvarez F, Arbe A, Colmenero J. The Debye's model for the dielectric relaxation of liquid water and the role of cross-dipolar correlations. A MD-simulations study. J Chem Phys 2023; 159:134505. [PMID: 37787136 DOI: 10.1063/5.0168588] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Accepted: 09/18/2023] [Indexed: 10/04/2023] Open
Abstract
By means of massive (more than 1.2 · 106 molecules) molecular dynamics simulations at 300 K we have disentangled self- and cross-dipolar contributions to the dielectric relaxation of liquid water that cannot be experimentally resolved. We have demonstrated that cross dipolar correlations are of paramount importance. They amount for almost a 60% of the total dielectric amplitude. The corresponding relaxation function is a one-step Debye-like function with a characteristic time, τcross, of the order of the phenomenological Debye time, τD. In contrast, the relaxation function corresponding to the self-contribution is rather complex and contains a fast decay related to dipolar librations and a second relaxation step that can be well described by two exponentials: a low-amplitude fast process (τ0 = 0.31 ps) and a main slow process (τself = 5.4 ps) that fully randomizes the dipolar orientation. In addition to dipolar relaxation functions, we have also calculated scattering-like magnitudes characterizing translation and rotation of water molecules. Although these processes can be considered as "jump" processes in the short time range, at the time scale of about τD-τcross, at which the cross-dipolar correlations decay to zero, the observed behavior cannot be distinguished from that corresponding to uncoupled Brownian translational and rotational diffusion. We propose that this is the reason why the Debye model, which does not consider intermolecular dipolar interactions, seems to work at time t ≳ τD.
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Affiliation(s)
- Fernando Alvarez
- Departamento de Polímeros y Materiales Avanzados: Física, Química y Tecnología (UPV/EHU), Apartado 1072, E-20080 San Sebastián, Spain
- Centro de Física de Materiales (CFM) (CSIC-UPV/EHU) - Materials Physics Center (MPC), Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
| | - Arantxa Arbe
- Centro de Física de Materiales (CFM) (CSIC-UPV/EHU) - Materials Physics Center (MPC), Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
| | - Juan Colmenero
- Departamento de Polímeros y Materiales Avanzados: Física, Química y Tecnología (UPV/EHU), Apartado 1072, E-20080 San Sebastián, Spain
- Centro de Física de Materiales (CFM) (CSIC-UPV/EHU) - Materials Physics Center (MPC), Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
- Donostia International Physics Center, Paseo Manuel de Lardizabal 4, 20018 San Sebastián, Spain
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4
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Isogai T, Uranagase M, Motobayashi K, Ogata S, Ikeda K. Probing collective terahertz vibrations of a hydrogen-bonded water network at buried electrochemical interfaces. Chem Sci 2023; 14:6531-6537. [PMID: 37350835 PMCID: PMC10284101 DOI: 10.1039/d3sc01734f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Accepted: 05/13/2023] [Indexed: 06/24/2023] Open
Abstract
The exceptional properties of liquid water such as thermodynamic, physical, and dielectric anomalies originate mostly from the hydrogen-bond networks of water molecules. The structural and dynamic properties of the hydrogen-bond networks have a significant impact on many biological and chemical processes in aqueous systems. In particular, the properties of interfacial water molecules with termination of the network at a solid surface are crucial to understanding the role of water in heterogeneous reactions. However, direct monitoring of the dynamics of hydrogen-bonded interfacial water molecules has been limited because of the lack of a suitable surface-selective spectroscopic means in the terahertz (THz) frequency range where collective vibrations of water exist. Here we show that hydrogen-bond vibrations below 9 THz can be measured in situ at an electrochemical interface, which is buried between two THz-opaque media, by using a density of states format of surface-enhanced inelastic light scattering spectra. The interpretation of the obtained spectra over the range 0.3-6 THz indicates that the negatively charged surface accelerates collective translational motions of water molecules in the lateral direction with the increase of hydrogen-bond defects. Alternatively, the positively charged surface results in suppression of lateral mobility. This work gives a new perspective on in situ spectroscopic investigations in heterogeneous reactions.
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Affiliation(s)
- Taichi Isogai
- Department of Physical Science and Engineering, Nagoya Institute of Technology Nagoya 466-8555 Japan
| | - Masayuki Uranagase
- Department of Physical Science and Engineering, Nagoya Institute of Technology Nagoya 466-8555 Japan
| | - Kenta Motobayashi
- Department of Physical Science and Engineering, Nagoya Institute of Technology Nagoya 466-8555 Japan
| | - Shuji Ogata
- Department of Physical Science and Engineering, Nagoya Institute of Technology Nagoya 466-8555 Japan
| | - Katsuyoshi Ikeda
- Department of Physical Science and Engineering, Nagoya Institute of Technology Nagoya 466-8555 Japan
- Frontier Research Institute for Materials Science (FRIMS), Nagoya Institute of Technology Nagoya 466-8555 Japan
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5
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Sugiyama JI, Tokunaga Y, Hishida M, Tanaka M, Takeuchi K, Satoh D, Imashimizu M. Nonthermal acceleration of protein hydration by sub-terahertz irradiation. Nat Commun 2023; 14:2825. [PMID: 37217486 DOI: 10.1038/s41467-023-38462-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2022] [Accepted: 04/20/2023] [Indexed: 05/24/2023] Open
Abstract
The collective intermolecular dynamics of protein and water molecules, which overlap in the sub-terahertz (THz) frequency region, are relevant for expressing protein functions but remain largely unknown. This study used dielectric relaxation (DR) measurements to investigate how externally applied sub-THz electromagnetic fields perturb the rapid collective dynamics and influence the considerably slower chemical processes in protein-water systems. We analyzed an aqueous lysozyme solution, whose hydration is not thermally equilibrated. By detecting time-lapse differences in microwave DR, we demonstrated that sub-THz irradiation gradually decreases the dielectric permittivity of the lysozyme solution by reducing the orientational polarization of water molecules. Comprehensive analysis combining THz and nuclear magnetic resonance spectroscopies suggested that the gradual decrease in the dielectric permittivity is not induced by heating but is due to a slow shift toward the hydrophobic hydration structure in lysozyme. Our findings can be used to investigate hydration-mediated protein functions based on sub-THz irradiation.
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Affiliation(s)
- Jun-Ichi Sugiyama
- Nanomaterials Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba, 305-8565, Japan
| | - Yuji Tokunaga
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo, Tokyo, 113-0033, Japan
| | - Mafumi Hishida
- Department of Chemistry, Faculty of Pure and Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8571, Japan
- Department of Chemistry, Faculty of Science, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo, 162-8601, Japan
| | - Masahito Tanaka
- Research Institute for Measurement and Analytical Instrumentation, National Institute of Advanced Industrial Science and Technology, Tsukuba, 305-8568, Japan
| | - Koh Takeuchi
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo, Tokyo, 113-0033, Japan
| | - Daisuke Satoh
- Research Institute for Measurement and Analytical Instrumentation, National Institute of Advanced Industrial Science and Technology, Tsukuba, 305-8568, Japan
| | - Masahiko Imashimizu
- Cellular and Molecular Biotechnology Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba, 305-8565, Japan.
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6
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Volkov AA, Chuchupal SV. Isochores and Heat Capacity of Liquid Water in Terms of the Ion–Molecular Model. Int J Mol Sci 2023; 24:ijms24065630. [PMID: 36982704 PMCID: PMC10051472 DOI: 10.3390/ijms24065630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 03/02/2023] [Accepted: 03/08/2023] [Indexed: 03/18/2023] Open
Abstract
Thermodynamics of liquid water in terms of a non-standard approach—the ion–molecular model—is considered. Water is represented as a dense gas of neutral H2O molecules and single charged H3O+ and OH− ions. The molecules and ions perform thermal collisional motion and interconvert due to ion exchange. The energy-rich process—vibrations of an ion in a hydration shell of molecular dipoles—well known to spectroscopists with its dielectric response at 180 cm−1 (5 THz), is suggested to be key for water dynamics. Taking into account this ion–molecular oscillator, we compose an equation of state of liquid water to obtain analytical expressions for the isochores and heat capacity.
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7
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Offei-Danso A, Morzan UN, Rodriguez A, Hassanali A, Jelic A. The collective burst mechanism of angular jumps in liquid water. Nat Commun 2023; 14:1345. [PMID: 36906703 PMCID: PMC10008639 DOI: 10.1038/s41467-023-37069-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Accepted: 02/24/2023] [Indexed: 03/13/2023] Open
Abstract
Understanding the microscopic origins of collective reorientational motions in aqueous systems requires techniques that allow us to reach beyond our chemical imagination. Herein, we elucidate a mechanism using a protocol that automatically detects abrupt motions in reorientational dynamics, showing that large angular jumps in liquid water involve highly cooperative orchestrated motions. Our automatized detection of angular fluctuations, unravels a heterogeneity in the type of angular jumps occurring concertedly in the system. We show that large orientational motions require a highly collective dynamical process involving correlated motion of many water molecules in the hydrogen-bond network that form spatially connected clusters going beyond the local angular jump mechanism. This phenomenon is rooted in the collective fluctuations of the network topology which results in the creation of defects in waves on the THz timescale. The mechanism we propose involves a cascade of hydrogen-bond fluctuations underlying angular jumps and provides new insights into the current localized picture of angular jumps, and its wide use in the interpretations of numerous spectroscopies as well in reorientational dynamics of water near biological and inorganic systems. The role of finite size effects, as well as of the chosen water model, on the collective reorientation is also elucidated.
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Affiliation(s)
- Adu Offei-Danso
- The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy
- International School for Advanced Studies (SISSA), Trieste, Italy
| | - Uriel N Morzan
- The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy
| | - Alex Rodriguez
- The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy
- Dipartimento di Matematica e Geoscienze, Università degli Studi di Trieste, Trieste, Italy
| | - Ali Hassanali
- The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy
| | - Asja Jelic
- The Abdus Salam International Centre for Theoretical Physics, Trieste, Italy.
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8
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Volkov AA, Chuchupal SV. Dielectric spectra of liquid water: Ultrabroadband modeling and interpretation. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
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9
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Correlation analysis between the complex electrical permittivity and relaxation time of tissue mimicking phantoms in 7 T MRI. Sci Rep 2022; 12:15444. [PMID: 36104392 PMCID: PMC9474530 DOI: 10.1038/s41598-022-19832-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Accepted: 09/05/2022] [Indexed: 12/04/2022] Open
Abstract
Dielectric relaxation theory describes the complex permittivity of a material in an alternating field; in particular, Debye theory relates the time it takes for an applied field to achieve the maximum polarization and the electrical properties of the material. Although, Debye’s equations were proposed for electrical polarization, in this study, we investigate the correlation between the magnetic longitudinal relaxation time T1 and the complex electrical permittivity of tissue-mimicking phantoms using a 7 T magnetic resonance scanner. We created phantoms that mimicked several human tissues with specific electrical properties. The electrical properties of the phantoms were measured using bench-test equipment. T1 values were acquired from phantoms using MRI. The measured values were fitted with functions based on dielectric estimations, using relaxation times of electrical polarization, and the mixture theory for dielectrics. The results show that, T1 and the real permittivity are correlated; therefore, the correlation can be approximated with a rational function in the case of water-based phantoms. The correlation between index loss and T1 was determined using a fitting function based on the Debye equation and mixture theory equation, in which the fraction of the materials was taken into account. This phantom study and analysis provide an insight into the application relaxation times used for estimating dielectric properties. Currently, the measurement of electrical properties based on dielectric relaxation theory is based on an antenna, sometimes invasive, that irradiates an electric field into a small sample; thus, it is not possible to create a map of electrical properties for a complex structure such as the human body. This study could be further used to compute the electrical properties maps of tissues by scanning images and measuring T1 maps.
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10
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Zhang J, Yan Y, Wang B, Liu L, Li S, Tian Z, Ouyang C, Gu J, Zhang X, Chen Y, Han J, Zhang W. Water dynamics in the hydration shell of hyper-branched poly-ethylenimine. Phys Chem Chem Phys 2022; 24:18393-18400. [PMID: 35880732 DOI: 10.1039/d2cp01944b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We performed THz and GHz dielectric relaxation spectroscopy to investigate the reorientational dynamics of water molecules in the hydration shell of amphiphilic hyper-branched poly-ethylenimine (HPEI). Four Debye equations were employed to describe four types of water in the hydration shell, including bulk-like water, under-coordinated water, slow water (water molecules hydrating the hydrophobic groups and water molecules accepting hydrogen bonds from the NH2 groups) and super slow water (water molecules donating hydrogen bonds to and accepting hydrogen bonds from NH groups). The time scales of undercoordinated and bulk-like water show a slight decline from 0.4 to 0.1 ps and from 8 to 2 ps, respectively. Because of hydrophilic amino groups, HPEI molecules exhibit a strong retardation effect, where the time scales of slow and super slow water increase with concentration from 17 to 39.9 ps and from 88 to 225 ps, respectively.
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Affiliation(s)
- Jiaqi Zhang
- Centre for Terahertz Waves and College of Precision Instrument and Optoeletronics Engineering, Tianjin University, Tinajin 300072, People's Republic of China.
| | - Yuyue Yan
- Centre for Terahertz Waves and College of Precision Instrument and Optoeletronics Engineering, Tianjin University, Tinajin 300072, People's Republic of China.
| | - Bin Wang
- Tianjin Engineering Technology Center of Chemical Wastewater Source Reduction and Recycling, School of Science, Tianjin Chengjian University, Tianjin 300072, People's Republic of China
| | - Liyuan Liu
- Centre for Terahertz Waves and College of Precision Instrument and Optoeletronics Engineering, Tianjin University, Tinajin 300072, People's Republic of China.
| | - Shaoxian Li
- Centre for Terahertz Waves and College of Precision Instrument and Optoeletronics Engineering, Tianjin University, Tinajin 300072, People's Republic of China.
| | - Zhen Tian
- Centre for Terahertz Waves and College of Precision Instrument and Optoeletronics Engineering, Tianjin University, Tinajin 300072, People's Republic of China.
| | - Chunmei Ouyang
- Centre for Terahertz Waves and College of Precision Instrument and Optoeletronics Engineering, Tianjin University, Tinajin 300072, People's Republic of China.
| | - Jianqiang Gu
- Centre for Terahertz Waves and College of Precision Instrument and Optoeletronics Engineering, Tianjin University, Tinajin 300072, People's Republic of China.
| | - Xueqian Zhang
- Centre for Terahertz Waves and College of Precision Instrument and Optoeletronics Engineering, Tianjin University, Tinajin 300072, People's Republic of China.
| | - Yu Chen
- Tianjin Key Laboratory of Molecular Optoelectronic Science, Department of Chemistry, School of Sciences, Tianjin University, Tianjin 300354, China
| | - Jiaguang Han
- Centre for Terahertz Waves and College of Precision Instrument and Optoeletronics Engineering, Tianjin University, Tinajin 300072, People's Republic of China.
| | - Weili Zhang
- School of Electrical and Computer Engineering, Oklahoma State University, Stillwater, Oklahoma 74078, USA.
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11
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Abstract
In this study, we examine the spectral dielectric properties of liquid water in charged nanopores over a wide range of frequencies (0.3 GHz to 30 THz) and pore widths (0.3 to 5 nm). This has been achieved using classical molecular dynamics simulations of hydrated Na-smectite, the prototypical swelling clay mineral. We observe a drastic (20-fold) and anisotropic decrease in the static relative permittivity of the system as the pore width decreases. This large decrement in static permittivity reflects a strong attenuation of the main Debye relaxation mode of liquid water. Remarkably, this strong attenuation entails very little change in the time scale of the collective relaxation. Our results indicate that water confined in charged nanopores is a distinct solvent with a much weaker collective nature than bulk liquid water, in agreement with recent observations of water in uncharged nanopores. Finally, we observe remarkable agreement between the dielectric properties of the simulated clay system against a compiled set of soil samples at various volumetric water contents. This implies that saturation may not be the sole property dictating the dielectric properties of soil samples, rather that the pore-size distribution of fully saturated nanopores may also play a critically important role.
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Affiliation(s)
- Thomas R Underwood
- Department of Civil and Environmental Engineering, Princeton University, Princeton, New Jersey 08544, United States
| | - Ian C Bourg
- Department of Civil and Environmental Engineering, Princeton University, Princeton, New Jersey 08544, United States.,High Meadows Environmental Institute, Princeton University, Princeton, New Jersey 08544, United States
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12
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Saeedi S, Chammani S, Fischer G. Feasibility Study of Glucose Concentration Measurement of Aqueous Solution Using Time Domain Reflected Signals. SENSORS 2022; 22:s22031174. [PMID: 35161919 PMCID: PMC8838697 DOI: 10.3390/s22031174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Revised: 01/30/2022] [Accepted: 02/01/2022] [Indexed: 11/16/2022]
Abstract
Recently, wideband microwave spectroscopy (WBMS) has been applied for material characterization. Blood glucose sensing through microwave spectroscopy is usually done with resonant frequency-domain methods. Time-domain (TD) WBMS is a low-cost and convenient technique that can be used for glucose sensing of the aqueous solution. In this paper, early research for the implementation of a TD dielectric spectroscopy setup for glucose concentration measurement is presented. TD reflected signals from water with different glucose content are calculated using inverse Laplace transform. The proposed setup is a quasi-monostatic setup in which measurements are done with two different devices in the frequency range of 0.1 to 6 GHz to make a comparison between frequency domain (FD) and TD methods. Frequency domain (FD) measurement is performed with VNA and two Vivaldi antennas. Then, TD data is obtained using the transforming option of VNA. Direct TD measurement is operated with a maximum length sequence (m-sequence) transceiver. Measurement and numerical results follow the same trend and show good agreement with each other. A monotonic relation between peaks of TD signals and the corresponding glucose concentration is achieved. The variation of the height of the reflected signal's peak is 0.00002 and 0.0005 for each 50 mg/dL glucose concentration with FD measurements and direct TD measurements, respectively. The glucose concentration range of 25 mg/dL to 400 mg/dL is investigated, and the worst repeatability of this method is 3.65% for 300 mg/dL.
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Affiliation(s)
- Samira Saeedi
- Time-Domain Electromagnetics Laboratory, Faculty of Electrical Engineering, K.N. Toosi University of Technology, Tehran 1631714191, Iran;
- Institute for Electronics Engineering, University of Erlangen, 91058 Nuremberg, Germany;
| | - Somayyeh Chammani
- Time-Domain Electromagnetics Laboratory, Faculty of Electrical Engineering, K.N. Toosi University of Technology, Tehran 1631714191, Iran;
- Correspondence:
| | - Georg Fischer
- Institute for Electronics Engineering, University of Erlangen, 91058 Nuremberg, Germany;
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13
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Bolle J, Bierwirth SP, Požar M, Perera A, Paulus M, Münzner P, Albers C, Dogan S, Elbers M, Sakrowski R, Surmeier G, Böhmer R, Tolan M, Sternemann C. Isomeric effects in structure formation and dielectric dynamics of different octanols. Phys Chem Chem Phys 2021; 23:24211-24221. [PMID: 34693949 DOI: 10.1039/d1cp02468j] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The understanding of the microstructure of associated liquids promoted by hydrogen-bonding and constrained by steric hindrance is highly relevant in chemistry, physics, biology and for many aspects of daily life. In this study we use a combination of X-ray diffraction, dielectric spectroscopy and molecular dynamics simulations to reveal temperature induced changes in the microstructure of different octanol isomers, i.e., linear 1-octanol and branched 2-, 3- and 4-octanol. In all octanols, the hydroxyl groups form the basis of chain-, cyclic- or loop-like bonded structures that are separated by outwardly directed alkyl chains. This clustering is analyzed through the scattering pre-peaks observed from X-ray scattering and simulations. The charge ordering which pilots OH aggregation can be linked to the strength of the Debye process observed in dielectric spectroscopy. Interestingly, all methods used here converge to the same interpretation: as one moves from 1-octanol to the branched octanols, the cluster structure evolves from loose large aggregates to a larger number of smaller, tighter aggregates. All alcohols exhibit a peculiar temperature dependence of both the pre-peak and Debye process, which can be understood as a change in microstructure promoted by chain association with increased chain length possibly assisted by ring-opening effects. All these results tend to support the intuitive picture of the entropic constraint provided by branching through the alkyl tails and highlight its capital entropic role in supramolecular assembly.
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Affiliation(s)
- Jennifer Bolle
- Fakultät Physik/DELTA, Technische Universität Dortmund, 44227 Dortmund, Germany.
| | - S Peter Bierwirth
- Fakultät Physik, Technische Universität Dortmund, 44227 Dortmund, Germany
| | - Martina Požar
- University of Split, Faculty of Science, Ruera Boškovića 33, 21000, Split, Croatia
| | - Aurélien Perera
- Sorbonne Université, Laboratoire de Physique Théorique de la Matiére Condensée (UMR CNRS 7600), 4 Place Jussieu, F75252, Paris cedex 05, France
| | - Michael Paulus
- Fakultät Physik/DELTA, Technische Universität Dortmund, 44227 Dortmund, Germany.
| | - Philipp Münzner
- Fakultät Physik, Technische Universität Dortmund, 44227 Dortmund, Germany
| | - Christian Albers
- Fakultät Physik/DELTA, Technische Universität Dortmund, 44227 Dortmund, Germany.
| | - Susanne Dogan
- Fakultät Physik/DELTA, Technische Universität Dortmund, 44227 Dortmund, Germany.
| | - Mirko Elbers
- Fakultät Physik/DELTA, Technische Universität Dortmund, 44227 Dortmund, Germany.
| | - Robin Sakrowski
- Fakultät Physik/DELTA, Technische Universität Dortmund, 44227 Dortmund, Germany.
| | - Göran Surmeier
- Fakultät Physik/DELTA, Technische Universität Dortmund, 44227 Dortmund, Germany.
| | - Roland Böhmer
- Fakultät Physik, Technische Universität Dortmund, 44227 Dortmund, Germany
| | - Metin Tolan
- Fakultät Physik/DELTA, Technische Universität Dortmund, 44227 Dortmund, Germany.
| | - Christian Sternemann
- Fakultät Physik/DELTA, Technische Universität Dortmund, 44227 Dortmund, Germany.
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14
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Inter-enantiomer conversion dynamics and Johari-Goldstein relaxation of benzophenones. Sci Rep 2021; 11:20248. [PMID: 34642356 PMCID: PMC8511015 DOI: 10.1038/s41598-021-99606-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Accepted: 09/23/2021] [Indexed: 11/09/2022] Open
Abstract
We employ temperature- and pressure-dependent dielectric spectroscopy, as well as differential scanning calorimetry, to characterize benzophenone and the singly-substituted ortho-bromobenzophenone derivative in the liquid and glass states, and analyze the results in terms of the molecular conformations reported for these molecules. Despite the significantly higher mass of the brominated derivative, its dynamic and calorimetric glass transition temperatures are only ten degrees higher than those of benzophenone. The kinetic fragility index of the halogenated molecule is lower than that of the parent compound, and is found to decrease with increasing pressure. By a detailed analysis of the dielectric loss spectra, we provide evidence for the existence of a Johari-Goldstein (JG) relaxation in both compounds, thus settling the controversy concerning the possible lack of a JG process in benzophenone and confirming the universality of this dielectric loss feature in molecular glass-formers. Both compounds also display an intramolecular relaxation, whose characteristic timescale appears to be correlated with that of the cooperative structural relaxation associated with the glass transition. The limited molecular flexibility of ortho-bromobenzophenone allows identifying the intramolecular relaxation as the inter-enantiomeric conversion between two isoenergetic conformers of opposite chirality, which only differ in the sign of the angle between the brominated aryl ring and the coplanar phenyl-ketone subunit. The observation by dielectric spectroscopy of a similar relaxation also in liquid benzophenone indicates that the inter-enantiomer conversion between the two isoenergetic helicoidal ground-state conformers of opposite chirality occurs via a transition state characterized by a coplanar phenyl-ketone moiety.
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15
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Hölzl C, Forbert H, Marx D. Dielectric relaxation of water: assessing the impact of localized modes, translational diffusion, and collective dynamics. Phys Chem Chem Phys 2021; 23:20875-20882. [PMID: 34523631 DOI: 10.1039/d1cp03507j] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A multitude of distinct physical processes and molecular mechanisms have been introduced in the past in an effort to understand the unusual dielectric loss spectrum of water with its pronounced peak at roughly 20 GHz. Our computer simulations including ab initio molecular dynamics provide no evidence for a major impact of cage dynamics or local-diffusive motion on the lineshape below 200 GHz. We also show that the collective motion of hundreds of water molecules and/or their significant diffusive displacements are not required. Instead, the dielectric relaxation of water up to about 200 GHz can be quantitatively described in terms of two unimodal and smoothly decaying spectral contributions.
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Affiliation(s)
- Christoph Hölzl
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, 44780 Bochum, Germany.
| | - Harald Forbert
- Center for Solvation Science ZEMOS, Ruhr-Universität Bochum, 44780 Bochum, Germany
| | - Dominik Marx
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, 44780 Bochum, Germany.
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16
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Herbert JM. Dielectric continuum methods for quantum chemistry. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2021. [DOI: 10.1002/wcms.1519] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- John M. Herbert
- Department of Chemistry and Biochemistry The Ohio State University Columbus Ohio USA
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17
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Kutus B, Shalit A, Hamm P, Hunger J. Dielectric response of light, heavy and heavy-oxygen water: isotope effects on the hydrogen-bonding network's collective relaxation dynamics. Phys Chem Chem Phys 2021; 23:5467-5473. [PMID: 33650591 DOI: 10.1039/d0cp06460b] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Isotopic substitutions largely affect the dielectric relaxation dynamics of hydrogen-bonded liquid water; yet, the role of the altered molecular masses and nuclear quantum effects has not been fully established. To disentangle these two effects we study the dielectric relaxation of light (H216O), heavy (D216O) and heavy-oxygen (H218O) water at temperatures ranging from 278 to 338 K. Upon 16O/18O exchange, we find that the relaxation time of the collective orientational relaxation mode of water increases by 4-5%, in quantitative agreement with the enhancement of viscosity. Despite the rotational character of dielectric relaxation, the increase is consistent with a translational mass factor. For H/D substitution, the slow-down of the relaxation time is more pronounced and also shows a strong temperature dependence. In addition to the classical mass factor, the enhancement of the relaxation time for D216O can be described by an apparent temperature shift of 7.2 K relative to H216O, which is higher than the 6.5 K shift reported for viscosity. As this shift accounts for altered zero-point energies, the comparison suggests that the underlying thermally populated states relevant to the activation of viscous flow and dielectric relaxation differ.
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Affiliation(s)
- Bence Kutus
- Department of Molecular Spectroscopy, Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.
| | - Andrey Shalit
- Department of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland
| | - Peter Hamm
- Department of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland
| | - Johannes Hunger
- Department of Molecular Spectroscopy, Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.
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18
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19
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Interplay between structural static and dynamical parameters as a key factor to understand peculiar behaviour of associated liquids. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.114084] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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20
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Hou R, Quan Y, Pan D. Dielectric constant of supercritical water in a large pressure–temperature range. J Chem Phys 2020; 153:101103. [DOI: 10.1063/5.0020811] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Rui Hou
- Department of Physics, Hong Kong University of Science and Technology, Hong Kong, China
| | - Yuhui Quan
- Department of Physics, Hong Kong University of Science and Technology, Hong Kong, China
| | - Ding Pan
- Department of Physics, Hong Kong University of Science and Technology, Hong Kong, China
- Department of Chemistry, Hong Kong University of Science and Technology, Hong Kong, China
- HKUST Fok Ying Tung Research Institute, Guangzhou, China
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21
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Shiraga K, Urabe M, Matsui T, Kikuchi S, Ogawa Y. Highly precise characterization of the hydration state upon thermal denaturation of human serum albumin using a 65 GHz dielectric sensor. Phys Chem Chem Phys 2020; 22:19468-19479. [PMID: 32761010 DOI: 10.1039/d0cp02265a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The biological functions of proteins depend on harmonization with hydration water surrounding them. Indeed, the dynamical transition of proteins, such as thermal denaturation, is dependent on the changes in the mobility of hydration water. However, the role of hydration water during dynamical transition is yet to be fully understood due to technical limitations in precisely characterizing the amount of hydration water. A state-of-the-art CMOS dielectric sensor consisting of 65 GHz LC resonators addressed this issue by utilizing the feature that oscillation frequency sensitively shifts in response to the complex dielectric constant at 65 GHz with extremely high precision. This study aimed to establish an analytical algorithm to derive the hydration number from the measured frequency shift and to demonstrate the transition of hydration number upon the thermal denaturation of human serum albumin. The determined hydration number in the native state drew a "global" hydration picture beyond the first solvation shell, with substantially reduced uncertainty of the hydration number (about ±1%). This allowed the detection of a rapid increase in the hydration number at about 55 °C during the heating process, which was in excellent phase with the irreversible rupture of the α-helical structure into solvent-exposed extended chains, whereas the hydration number did not trace the forward path in the subsequent cooling process. Our result indicates that the weakening of water hydrogen bonds trigger the unfolding of the protein structure first, followed by the changes in the number of hydration water as a consequence of thermal denaturation.
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Affiliation(s)
- Keiichiro Shiraga
- RIKEN Center for Integrative Medical Sciences (IMS), Tsurumi, Yokohama, Kanagawa 230-0045, Japan.
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22
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Corradi G, Krampf A, Messerschmidt S, Vittadello L, Imlau M. Excitonic hopping-pinning scenarios in lithium niobate based on atomistic models: different kinds of stretched exponential kinetics in the same system. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2020; 32:413005. [PMID: 32531769 DOI: 10.1088/1361-648x/ab9c5b] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Accepted: 06/12/2020] [Indexed: 06/11/2023]
Abstract
Based on a model of coupled processes with differently time-dependent decay kinetics we present a critical review on photoluminescence (PL) and transient absorption (TA) experiments in undoped and Mg or Fe-doped LiNbO3, together with a comprehensive interpretation of visible radiative and parallel non-radiative decay processes on timescales ranging from 50 ns up to minutes. Analogies and peculiarities of the kinetics of mobile self-trapped and pinned excitons are investigated and compared with those of hopping polarons in the same system. Exciton hopping with an activation energy of ≈0.18 eV is shown to govern the lifetime and quenching of the short PL component above 100 K. Strong interaction between excitons and dipolar pinning defects explains the exorbitant lifetimes and large depinning energies characterizing delayed TA components in doped LiNbO3, while restricted hopping of the pinned excitons is proposed to play a role in strongly delayed PL in LiNbO3:Mg exhibiting a narrowed emission band due to locally reduced electron-phonon coupling. Atomistic models of pinned excitons are proposed corresponding to charge-compensated dipolar defects predicted by theories of dopant incorporation in LiNbO3and are systematically assigned to absorption bands observed near the UV edge. Excitation in these bands is shown to lead directly to pinned exciton states confirming also the previously proposed two-step exciton-decay scenario in LiNbO3:Fe. Weak intrinsic sub-80 ns luminescence in congruent LiNbO3is explained as an opposite effect of enhanced electron-phonon coupling for excitons pinned on NbLiantisite defects. The comparison of the different observed stretching behaviors in the paradigmatic system LiNbO3provides an intuitive picture of the underlying physical processes. The findings are relevant not only for holographic and non-linear optical applications of LiNbO3but are of general interest also for the treatment of stretched exponential or other time-dependent kinetics in complex condensed systems ranging from nanocrystals and polymers to liquids and biophysical systems.
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Affiliation(s)
- G Corradi
- Osnabrück University, Barbarastraße 7, D-49076 Osnabrück, Germany
- Wigner Research Center for Physics, Konkoly-Thege M. út 29-33, H-1121 Budapest, Hungary
| | - A Krampf
- Osnabrück University, Barbarastraße 7, D-49076 Osnabrück, Germany
| | - S Messerschmidt
- Osnabrück University, Barbarastraße 7, D-49076 Osnabrück, Germany
| | - L Vittadello
- Osnabrück University, Barbarastraße 7, D-49076 Osnabrück, Germany
| | - M Imlau
- Osnabrück University, Barbarastraße 7, D-49076 Osnabrück, Germany
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23
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Xu D, Feng S, Wang JQ, Wang LM, Richert R. Entropic Nature of the Debye Relaxation in Glass-Forming Monoalcohols. J Phys Chem Lett 2020; 11:5792-5797. [PMID: 32608239 DOI: 10.1021/acs.jpclett.0c01499] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The dynamics and thermodynamics of the Debye and structural (α) relaxations in isomeric monoalcohols near the glass transition temperature Tg are explored using dielectric and calorimetric techniques. The α relaxation strength at Tg is found to correlate with the heat capacity increment, but no thermal signals can be detected to link to the Debye relaxation. We also observed that the activation energy of the Debye relaxation in monoalcohols is quantitatively correlated with that of the α relaxation at the kinetic Tg, sharing the dynamic behavior of the Rouse modes found in polymers. The experimental results together with the analogy to the Rouse modes in polymers suggest that the Debye process in monoalcohols is an entropic process manifested by the total dipole fluctuation of the supramolecular structures, which is triggered and driven by the α relaxation.
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Affiliation(s)
- Di Xu
- State Key Lab of Metastable Materials Science and Technology, and College of Materials Science and Engineering, Yanshan University, Qinhuangdao, Hebei 066004, China
| | - Shidong Feng
- State Key Lab of Metastable Materials Science and Technology, and College of Materials Science and Engineering, Yanshan University, Qinhuangdao, Hebei 066004, China
| | - Jun-Qiang Wang
- CAS Key Laboratory of Magnetic Materials and Devices, and Zhejiang Province Key Laboratory of Magnetic Materials and Application Technology, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo 315201, China
| | - Li-Min Wang
- State Key Lab of Metastable Materials Science and Technology, and College of Materials Science and Engineering, Yanshan University, Qinhuangdao, Hebei 066004, China
| | - R Richert
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States
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24
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Skarmoutsos I, Guardia E. Solvation structure and dynamics of the dimethylammonium cation diluted in liquid water: A molecular dynamics approach. J Chem Phys 2020; 152:234501. [PMID: 32571039 DOI: 10.1063/5.0004204] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Classical molecular dynamics simulation techniques were employed to investigate the local solvation structure and related dynamics of the dimethylammonium cation diluted in liquid water at ambient conditions. The translational and orientational order around the dimethylammonium cation was investigated in terms of the corresponding radial and angular distribution functions. The results obtained revealed that the first solvation shell of the dimethylammonium consists mainly of two and, less frequently, three water molecules. The two nearest water neighbors form hydrogen bonds with the ammonium hydrogen atoms of the cation, whereas the third neighbor interacts with the methyl hydrogen atoms as well. The distribution of the trigonal order parameter exhibits a bimodal behavior, signifying the existence of local orientational heterogeneities in the solvation shell of the dimethylammonium cation. The calculated continuous and intermittent residence and hydrogen bond lifetimes for the cation-water pairs have also been found to be longer in comparison with the water-water ones. The very similar self-diffusion coefficients of the dimethylammonium cation and the water molecules in the bulk dilute solution indicate that the translational motions of the cation are mainly controlled by the translational mobility of the surrounding water molecules.
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Affiliation(s)
- Ioannis Skarmoutsos
- Theoretical and Physical Chemistry Institute, National Hellenic Research Foundation, Vass. Constantinou 48, GR-116 35 Athens, Greece
| | - Elvira Guardia
- Departament de Física, Universitat Politècnica de Catalunya, Campus Nord-Edifici B4-B5, Jordi Girona 1-3, Barcelona E 08034, Spain
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25
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Carlson S, Brünig FN, Loche P, Bonthuis DJ, Netz RR. Exploring the Absorption Spectrum of Simulated Water from MHz to Infrared. J Phys Chem A 2020; 124:5599-5605. [DOI: 10.1021/acs.jpca.0c04063] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Shane Carlson
- Fachbereich Physik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Florian N. Brünig
- Fachbereich Physik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Philip Loche
- Fachbereich Physik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Douwe Jan Bonthuis
- Institute of Theoretical and Computational Physics, Graz University of Technology, 8010 Graz, Austria
| | - Roland R. Netz
- Fachbereich Physik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
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26
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Novelli F, Guchhait B, Havenith M. Towards Intense THz Spectroscopy on Water: Characterization of Optical Rectification by GaP, OH1, and DSTMS at OPA Wavelengths. MATERIALS (BASEL, SWITZERLAND) 2020; 13:E1311. [PMID: 32183131 PMCID: PMC7143731 DOI: 10.3390/ma13061311] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Revised: 03/05/2020] [Accepted: 03/10/2020] [Indexed: 12/02/2022]
Abstract
Water is the most prominent solvent. The unique properties of water are rooted in the dynamical hydrogen-bonded network. While TeraHertz (THz) radiation can probe directly the collective molecular network, several open issues remain about the interpretation of these highly anharmonic, coupled bands. In order to address this problem, we need intense THz radiation able to drive the liquid into the nonlinear response regime. Firstly, in this study, we summarize the available brilliant THz sources and compare their emission properties. Secondly, we characterize the THz emission by Gallium Phosphide (GaP), 2-{3-(4-hydroxystyryl)-5,5-dimethylcyclohex-2-enylidene}malononitrile (OH1), and 4-N,N-dimethylamino-4'-N'-methyl-stilbazolium 2,4,6-trimethylbenzenesulfonate (DSTMS) crystals pumped by an amplified near-infrared (NIR) laser with tunable wavelength. We found that both OH1 as well as DSTMS could convert NIR laser radiation between 1200 and 2500 nm into THz radiation with high efficiency (> 2 × 10-4), resulting in THz peak fields exceeding 0.1 MV/cm for modest pump excitation (~ mJ/cm2). DSTMS emits the broadest spectrum, covering the entire bandwidth of our detector from ca. 0.5 to ~7 THz, also at a laser wavelength of 2100 nm. Future improvements will require handling the photothermal damage of these delicate organic crystals, and increasing the THz frequency.
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Affiliation(s)
- Fabio Novelli
- Department of Physical Chemistry II, Ruhr University Bochum, 44801 Bochum, Germany;
| | - Biswajit Guchhait
- Department of Physical Chemistry II, Ruhr University Bochum, 44801 Bochum, Germany;
- Department of Chemistry, School of Natural Sciences, Shiv Nadar University, Greater Noida, Uttar Pradesh 201314, India
| | - Martina Havenith
- Department of Physical Chemistry II, Ruhr University Bochum, 44801 Bochum, Germany;
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27
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Elgabarty H, Kühne TD. Tumbling with a limp: local asymmetry in water's hydrogen bond network and its consequences. Phys Chem Chem Phys 2020; 22:10397-10411. [DOI: 10.1039/c9cp06960g] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Ab initio molecular dynamics simulations of ambient liquid water and energy decomposition analysis have recently shown that water molecules exhibit significant asymmetry between the strengths of the two donor and/or the two acceptor interactions.
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Affiliation(s)
- Hossam Elgabarty
- Dynamics of Condensed Matter and Center for Sustainable Systems Design
- Chair of Theoretical Chemistry
- University of Paderborn
- Paderborn
- Germany
| | - Thomas D. Kühne
- Dynamics of Condensed Matter and Center for Sustainable Systems Design
- Chair of Theoretical Chemistry
- University of Paderborn
- Paderborn
- Germany
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28
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Świtlicka A, Machura B, Kruszynski R, Moliner N, Carbonell JM, Cano J, Lloret F, Julve M. Magneto-structural diversity of Co(ii) compounds with 1-benzylimidazole induced by linear pseudohalide coligands. Inorg Chem Front 2020. [DOI: 10.1039/d0qi00752h] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The magneto-structural diversity of 1-benzylimidazole-containing cobalt(ii) compounds with linear pseudohalide ions (NCS−, NCO−, and N3−) is explored.
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Affiliation(s)
- Anna Świtlicka
- Department of Crystallography
- Institute of Chemistry
- University of Silesia
- 40-006 Katowice
- Poland
| | - Barbara Machura
- Department of Crystallography
- Institute of Chemistry
- University of Silesia
- 40-006 Katowice
- Poland
| | - Rafał Kruszynski
- Department of X-ray Crystallography and Crystal Chemistry
- Institute of General and Ecological Chemistry
- Lodz University of Technology
- 90-924 Łodz
- Poland
| | - Nicolás Moliner
- Department of Química Inorgànica/Instituto de Ciencia Molecular (ICMol)
- Facultat de Quimica de la Universitat de València
- 46980 Paterna
- Spain
| | - José Miguel Carbonell
- Department of Química Inorgànica/Instituto de Ciencia Molecular (ICMol)
- Facultat de Quimica de la Universitat de València
- 46980 Paterna
- Spain
| | - Joan Cano
- Department of Química Inorgànica/Instituto de Ciencia Molecular (ICMol)
- Facultat de Quimica de la Universitat de València
- 46980 Paterna
- Spain
| | - Francesc Lloret
- Department of Química Inorgànica/Instituto de Ciencia Molecular (ICMol)
- Facultat de Quimica de la Universitat de València
- 46980 Paterna
- Spain
| | - Miguel Julve
- Department of Química Inorgànica/Instituto de Ciencia Molecular (ICMol)
- Facultat de Quimica de la Universitat de València
- 46980 Paterna
- Spain
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29
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Romanini M, Barrio M, Macovez R, Capaccioli S, Tamarit JL. Mixtures of m-fluoroaniline with apolar aromatic molecules: Phase behaviour, suppression of H-bonded clusters, and local H-bond relaxation dynamics. J Mol Liq 2019. [DOI: 10.1016/j.molliq.2019.111998] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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30
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Wexler AD, Fuchs EC, Woisetschläger J, Vitiello G. Electrically induced liquid-liquid phase transition in water at room temperature. Phys Chem Chem Phys 2019; 21:18541-18550. [PMID: 31397450 DOI: 10.1039/c9cp03192h] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
In this work we expand on findings previously reported [Wexler et al., Phys. Chem. Chem. Phys., 2016, 18, 16281] on the experimental observation of a phase transition in a hydrogen bonded liquid manifesting in long range dipole-dipole interactions. The studied system, liquid water stressed by an electric field, exhibits collective oscillations brought about through spontaneous breakdown of symmetry. Raman spectroscopy identifies the primary excitation of the emergent phase as transverse optically active phonon-like sidebands that appear on the hydrogen bonded asymmetric stretch mode. The phase transition is observed throughout the entire volume of liquid. The system also exhibits a self-similarity relation between the scattered Raman intensity and the electric field strength which further supports the conclusion that collective behavior persists against thermal disruption. The experimental findings are discussed in terms of a quantum field theory for macroscopic quantum systems.
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Affiliation(s)
- Adam D Wexler
- Arie Zwijnenburg Laboratory for Advanced Microscopy and Optical Metrology, Wetsus - European Center of Excellence for Sustainable Water Technology, Oostergoweg 9, 8911MA Leeuwarden, The Netherlands.
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31
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Nasedkin A, Cerveny S, Swenson J. Molecular Insights into Dipole Relaxation Processes in Water-Lysine Mixtures. J Phys Chem B 2019; 123:6056-6064. [PMID: 31268322 DOI: 10.1021/acs.jpcb.9b01928] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Dielectric spectroscopy is a robust method to investigate relaxations of molecular dipoles. It is particularly useful for studies of biological solutions because of the potential of this method to cover a broad range of dynamical time scales typical for such systems. However, this technique does not provide any information about the nature of the molecular motions, which leads to a certain underemployment of dielectric spectroscopy for gaining microscopic understanding of material properties. For such detailed understanding, computer simulations are valuable tools because they can provide information about the nature of molecular motions observed by, for example, dielectric spectroscopy and to further complement them with structural information. In this work, we acquire information about the nature of dipole relaxation, in n-lysine solutions by means of molecular dynamics simulations. Our results indicate that the experimentally observed main relaxation process of n-lysine has different origins for the single monomer and the polypeptide chains. The relaxation of 1-lysine is due to the motions of whole molecules, whereas the experimentally observed relaxation of 3-lysine and 4-lysine is due to the motions of the residues, which, in turn, are promoted by water relaxation. Furthermore, we propose a new structural model of the lysine amino acids, which can quantitatively account for the experimental dielectric relaxation data. Hydrogen bonding and the structure of water are also discussed in terms of their influence on relaxation processes.
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Affiliation(s)
- Alexandr Nasedkin
- Department of Physics , Chalmers University of Technology , SE-412 96 Göteborg , Sweden
| | - Silvina Cerveny
- Centro de Fisica de Materiales (CSIC, UPV/EHU)-Materials Physics Center (MPC) , Paseo Manuel de Lardizabal 5 , 20018 San Sebastián , Spain.,Donostia International Physics Center (DIPC) , 20018 San Sebastián , Spain
| | - Jan Swenson
- Department of Physics , Chalmers University of Technology , SE-412 96 Göteborg , Sweden
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32
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Zhang J, Liu L, Chen Y, Wang B, Ouyang C, Tian Z, Gu J, Zhang X, He M, Han J, Zhang W. Water Dynamics in the Hydration Shell of Amphiphilic Macromolecules. J Phys Chem B 2019; 123:2971-2977. [DOI: 10.1021/acs.jpcb.9b02040] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jiaqi Zhang
- Center for Terahertz Waves and College of Precision Instrument and Optoelectronics Engineering, and Key Laboratory of Optoelectronics Information and Technology, Ministry of Education, Tianjin University, Tianjin 300072, China
| | - Liyuan Liu
- Center for Terahertz Waves and College of Precision Instrument and Optoelectronics Engineering, and Key Laboratory of Optoelectronics Information and Technology, Ministry of Education, Tianjin University, Tianjin 300072, China
| | - Yu Chen
- Tianjin Key Laboratory of Molecular Optoelectronic Science, Department of Chemistry, School of Sciences, Tianjin University, Tianjin 300354, China
| | - Bin Wang
- Tianjin Engineering Technology Center of Chemical Wastewater Source Reduction and Recycling, School of Science, Tianjin Chengjian University, Tianjin 300384, P. R. China
| | - Chunmei Ouyang
- Center for Terahertz Waves and College of Precision Instrument and Optoelectronics Engineering, and Key Laboratory of Optoelectronics Information and Technology, Ministry of Education, Tianjin University, Tianjin 300072, China
| | - Zhen Tian
- Center for Terahertz Waves and College of Precision Instrument and Optoelectronics Engineering, and Key Laboratory of Optoelectronics Information and Technology, Ministry of Education, Tianjin University, Tianjin 300072, China
| | - Jianqiang Gu
- Center for Terahertz Waves and College of Precision Instrument and Optoelectronics Engineering, and Key Laboratory of Optoelectronics Information and Technology, Ministry of Education, Tianjin University, Tianjin 300072, China
| | - Xueqian Zhang
- Center for Terahertz Waves and College of Precision Instrument and Optoelectronics Engineering, and Key Laboratory of Optoelectronics Information and Technology, Ministry of Education, Tianjin University, Tianjin 300072, China
| | - Mingxia He
- Center for Terahertz Waves and College of Precision Instrument and Optoelectronics Engineering, and Key Laboratory of Optoelectronics Information and Technology, Ministry of Education, Tianjin University, Tianjin 300072, China
| | - Jiaguang Han
- Center for Terahertz Waves and College of Precision Instrument and Optoelectronics Engineering, and Key Laboratory of Optoelectronics Information and Technology, Ministry of Education, Tianjin University, Tianjin 300072, China
| | - Weili Zhang
- Center for Terahertz Waves and College of Precision Instrument and Optoelectronics Engineering, and Key Laboratory of Optoelectronics Information and Technology, Ministry of Education, Tianjin University, Tianjin 300072, China
- School of Electrical and Computer Engineering, Oklahoma State University, Stillwater, Oklahoma 74078, United States
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Ghobaei Namhil Z, Kemp C, Verrelli E, Iles A, Pamme N, Adawi AM, Kemp NT. A label-free aptamer-based nanogap capacitive biosensor with greatly diminished electrode polarization effects. Phys Chem Chem Phys 2019; 21:681-691. [PMID: 30543220 DOI: 10.1039/c8cp05510f] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
A significant impediment to the use of impedance spectroscopy in bio-sensing is the electrode polarization effect that arises from the movement of free ions to the electrode-solution interface, forming an electrical double layer (EDL). The EDL screens the dielectric response of the bulk and its large capacitance dominates the signal response at low frequency, masking information particularly relevant for biological samples, such as molecular conformation changes and DNA hybridization. The fabrication of nanogap capacitors with electrode separation less than the EDL thickness can significantly reduce electrode polarization effects and provide enormous improvement in sensitivity due to better matching of the sensing volume with the size of the target entities. We report on the fabrication of a horizontal thin-film nanogap capacitive sensor with electrode separation of 40 nm that shows almost no electrode polarization effects when measured with water and ionic buffer solutions, thereby allowing direct quantification of their relative permittivity at low frequencies. Surface modification of the electrodes with thiol-functionalized single strand DNA aptamers transforms the device into a label-free biosensor with high sensitivity and selectivity towards the detection of a specific protein. Using this approach, we have developed a biosensor for the detection of human alpha thrombin. In addition, we also examine frequency dependent permittivity measurements on high ionic strength solutions contained within the nanogap and discuss how these support recent experimental observations of large Debye lengths. A large shift in the Debye relaxation frequency to lower frequency is also found, which is consistent with water molecules being in a rigid-like state, possibly indicating the formation of an ordered "ice-like" phase. Altogether, this work highlights the need for better understanding of fluids in confined, nanoscale geometries, from which important new applications in sensing may arise.
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Affiliation(s)
- Zahra Ghobaei Namhil
- School of Mathematics and Physical Sciences, University of Hull, Hull, HU6 7RX, UK.
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Schulz R, von Hansen Y, Daldrop JO, Kappler J, Noé F, Netz RR. Collective hydrogen-bond rearrangement dynamics in liquid water. J Chem Phys 2018; 149:244504. [DOI: 10.1063/1.5054267] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- R. Schulz
- Department of Physics, Freie Universität Berlin, 14195 Berlin, Germany
| | - Y. von Hansen
- Department of Physics, Freie Universität Berlin, 14195 Berlin, Germany
| | - J. O. Daldrop
- Department of Physics, Freie Universität Berlin, 14195 Berlin, Germany
| | - J. Kappler
- Department of Physics, Freie Universität Berlin, 14195 Berlin, Germany
| | - F. Noé
- Department of Mathematics and Computer Science, Freie Universität Berlin, 14195 Berlin, Germany
| | - R. R. Netz
- Department of Physics, Freie Universität Berlin, 14195 Berlin, Germany
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Shiraga K, Tanaka K, Arikawa T, Saito S, Ogawa Y. Reconsideration of the relaxational and vibrational line shapes of liquid water based on ultrabroadband dielectric spectroscopy. Phys Chem Chem Phys 2018; 20:26200-26209. [PMID: 30318523 DOI: 10.1039/c8cp04778b] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
The Debye relaxation function is widely used to describe the large dielectric dispersion of ambient water around 20 GHz. However, from a theoretical point of view, this function is supposed to give incorrect predictions at high frequencies owing to the inappropriate assumption that inertial effects and intermolecular interactions do not affect the relaxation dynamics. Our ultrabroadband spectroscopy investigation of liquid water ranging from 500 MHz to 400 THz did demonstrate that the Debye function is inaccurate far above the microwave region. As an alternative, we tried a stochastic frequency modulation (SFM) model assuming instantaneous modification of the line shapes by the correlation with the surrounding system. The SFM relaxation model reproduced the experimental dielectric spectra up to 400 THz, showing that the hydrogen-bond dynamics are associated with the inertial effect that causes the non-exponential relaxation behaviour in a very short time (typically 25 fs). Within the framework of this relaxation model, the hindered translation modes are able to be approximated as fast modulation (homogeneous) line shapes because the interaction time with frequency modulation is too short. Compared with them, the libation mode is found to have a relatively slow modulation (inhomogeneous) origin, where disturbance of water hydrogen bonds induced by the hindered translations leads to fluctuations in the libration frequency.
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Affiliation(s)
- Keiichiro Shiraga
- RIKEN Center for Integrative Medical Sciences, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan.
| | - Koichiro Tanaka
- Department of Physics, Graduate School of Science, Kyoto University, Kitashirakawa-oiwakecho, Sakyo-ku, Kyoto 606-8502, Japan. and Institute for Integrated Cell-Material Sciences (iCeMS), Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Takashi Arikawa
- Department of Physics, Graduate School of Science, Kyoto University, Kitashirakawa-oiwakecho, Sakyo-ku, Kyoto 606-8502, Japan.
| | - Shinji Saito
- Department of Theoretical and Computational Molecular Science, Institute for Molecular Science, Myodaiji, Okazaki, Aichi 444-8585, Japan. and The Graduate University for Advanced Studies, Myodaiji, Okazaki, Aichi 444-8585, Japan
| | - Yuichi Ogawa
- Graduate School of Agriculture, Kyoto University, Kitashirakawa-oiwakecho, Sakyo-ku, Kyoto 606-8502, Japan.
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Lunkenheimer P, Emmert S, Gulich R, Köhler M, Wolf M, Schwab M, Loidl A. Electromagnetic-radiation absorption by water. Phys Rev E 2017; 96:062607. [PMID: 29347319 DOI: 10.1103/physreve.96.062607] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2017] [Indexed: 06/07/2023]
Abstract
Why does a microwave oven work? How does biological tissue absorb electromagnetic radiation? Astonishingly, we do not have a definite answer to these simple questions because the microscopic processes governing the absorption of electromagnetic waves by water are largely unclarified. This absorption can be quantified by dielectric loss spectra, which reveal a huge peak at a frequency of the exciting electric field of about 20 GHz and a gradual tailing off toward higher frequencies. The microscopic interpretation of such spectra is highly controversial and various superpositions of relaxation and resonance processes ascribed to single-molecule or molecule-cluster motions have been proposed for their analysis. By combining dielectric, microwave, THz, and far-infrared spectroscopy, here we provide nearly continuous temperature-dependent broadband spectra of water. Moreover, we find that corresponding spectra for aqueous solutions reveal the same features as pure water. However, in contrast to the latter, crystallization in these solutions can be avoided by supercooling. As different spectral contributions tend to disentangle at low temperatures, this enables us to deconvolute them when approaching the glass transition under cooling. We find that the overall spectral development, including the 20 GHz feature (employed for microwave heating), closely resembles the behavior known for common supercooled liquids. Thus water's absorption of electromagnetic waves at room temperature is not unusual but very similar to that of glass-forming liquids at elevated temperatures, deep in the low-viscosity liquid regime, and should be interpreted along similar lines.
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Affiliation(s)
- P Lunkenheimer
- Experimental Physics V, Center for Electronic Correlations and Magnetism, University of Augsburg, 86159 Augsburg, Germany
| | - S Emmert
- Experimental Physics V, Center for Electronic Correlations and Magnetism, University of Augsburg, 86159 Augsburg, Germany
| | - R Gulich
- Experimental Physics V, Center for Electronic Correlations and Magnetism, University of Augsburg, 86159 Augsburg, Germany
| | - M Köhler
- Experimental Physics V, Center for Electronic Correlations and Magnetism, University of Augsburg, 86159 Augsburg, Germany
| | - M Wolf
- Experimental Physics V, Center for Electronic Correlations and Magnetism, University of Augsburg, 86159 Augsburg, Germany
| | - M Schwab
- Experimental Physics V, Center for Electronic Correlations and Magnetism, University of Augsburg, 86159 Augsburg, Germany
| | - A Loidl
- Experimental Physics V, Center for Electronic Correlations and Magnetism, University of Augsburg, 86159 Augsburg, Germany
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