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Agafonov MA, Alexandrov EV, Artyukhova NA, Bekmukhamedov GE, Blatov VA, Butova VV, Gayfulin YM, Garibyan AA, Gafurov ZN, Gorbunova YG, Gordeeva LG, Gruzdev MS, Gusev AN, Denisov GL, Dybtsev DN, Enakieva YY, Kagilev AA, Kantyukov AO, Kiskin MA, Kovalenko KA, Kolker AM, Kolokolov DI, Litvinova YM, Lysova AA, Maksimchuk NV, Mironov YV, Nelyubina YV, Novikov VV, Ovcharenko VI, Piskunov AV, Polyukhov DM, Polyakov VA, Ponomareva VG, Poryvaev AS, Romanenko GV, Soldatov AV, Solovyeva MV, Stepanov AG, Terekhova IV, Trofimova OY, Fedin VP, Fedin MV, Kholdeeva OA, Tsivadze AY, Chervonova UV, Cherevko AI, Shul′gin VF, Shutova ES, Yakhvarov DG. METAL-ORGANIC FRAMEWORKS IN RUSSIA: FROM THE SYNTHESIS AND STRUCTURE TO FUNCTIONAL PROPERTIES AND MATERIALS. J STRUCT CHEM+ 2022. [DOI: 10.1134/s0022476622050018] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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Synthesis, spectroscopic, and computational studies on molecular charge-transfer complex of 2-((2-hydroxybenzylidene) amino)-2-(hydroxymethyl) propane-1, 3-diol with chloranilic acid: Potential antiviral activity simulation of CT-complex against SARS-CoV-2. J Mol Struct 2022; 1251:132010. [PMID: 34866653 PMCID: PMC8627645 DOI: 10.1016/j.molstruc.2021.132010] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 11/19/2021] [Accepted: 11/24/2021] [Indexed: 12/16/2022]
Abstract
An innovative charge-transfer complex between the Schiff base 2-((2-hydroxybenzylidene) amino)-2-(hydroxymethyl) propane-1,3-diol [SAL-THAM] and the π-acceptor, chloranilic acid (CLA) within the mole ratio (1:1) was synthesized and characterized aiming to investigate its electronic transition spectra in acetonitrile (ACN), methanol (MeOH) and ethanol (EtOH) solutions. Applying Job`s method in the three solvents supported the 1:1 (CLA: SAL-THAM) mole ratio complex formation. The formation of stable CT- complex was shown by the highest values of charge-transfer complex formation constants, KCT, calculated using minimum-maximum absorbance method, with the sequence, acetonitrile > ethanol > methanol DFT study on the synthesized CT complex was applied based on the B3LYP method to evaluate the optimized structure and extract geometrical and reactivity parameters. Based on TD-DFT theory, the electronic properties, 1H and 13C NMR, IR, and UV-Vis spectra of the studied system in different solvents showing good agreement with the experimental studies. MEP map described the possibility of hydrogen bonding and charge transfer in the studied system. Finally, a computational approach for screening the antiviral activity of CT - complex towards SARS-CoV-2 coronavirus protease via molecular docking simulation was conducted and confirmed with molecular dynamic (MD) simulation.
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Key Words
- ACN, acetonitrile
- CLA, chloranilic acid
- CT-complex, charge transfer complex
- Charge-transfer complex
- Chloranilic
- DFT
- DFT, density functional theory
- DFT/GIAO, density functional theory/ gauge-including atomic orbital
- EtOH, ethanol
- GC-376, 3C-like protease
- HB, hydrogen bonding
- HOMO, higher occupied molecular orbital
- LUMO, lower unoccupied molecular orbital
- MD, molecular dynamic simulation
- MEP, molecular electrostatic potential
- MeOH, methanol
- Molecular docking
- Mpro, main protease
- NBO, natural bond orbital
- NCI, non-covalent interaction
- NCI-RDG, non-covalent interaction-reduced density gradient analysis
- NRE, nuclear repulsion energy
- PCM, polarizable continuum model
- PDB, protein data bank
- PLpro, paplian-like protease
- SARS-CoV-2
- SARS-CoV-2, severe acute respiratory syndrome corona-virus 2
- Spectroscopic
- TD-DFT, time dependent- density functional theory
- VDW, van der Waals
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Elbadawy HA, El-Dissouky A, Attia AA, Khalil TE. The tendency of the charge transfer system, derived from chloranilic acid and 2-amino-2-(hydroxymethyl)-1,3-propanediol towards copper(II) complex-formation: characterization, anion impact, and biological studies. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131690] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Romashev NF, Bakaev IV, Komlyagina VI, Fomenko IS, Laricheva YA, Petrov PA, Gushchin AL. SYNTHESIS AND STRUCTURE OF A BINUCLEAR Pd(II) CHLORANILATE COMPLEX. J STRUCT CHEM+ 2021. [DOI: 10.1134/s0022476621100127] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Trofimova OY, Maleeva AV, Ershova IV, Cherkasov AV, Fukin GK, Aysin RR, Kovalenko KA, Piskunov AV. Heteroleptic La III Anilate/Dicarboxylate Based Neutral 3D-Coordination Polymers. Molecules 2021; 26:2486. [PMID: 33923226 PMCID: PMC8123117 DOI: 10.3390/molecules26092486] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Revised: 04/22/2021] [Accepted: 04/22/2021] [Indexed: 11/30/2022] Open
Abstract
Three new 3D metal-organic frameworks of lanthanum based on mixed anionic ligands, [(La2(pQ)2(BDC)4)·4DMF]n, [(La2(pQ)2(DHBDC)4)·4DMF]n, [(La2(CA)2(BDC)4)·4DMF]n (pQ-dianion of 2,5-dihydroxy-3,6-di-tert-butyl-para-quinone, CA-dianion of chloranilic acid, BDC-1,4-benzenedicarboxylate, DHBDC-2,5-dihydroxy-1,4-benzenedicarboxylate and DMF-N,N'-dimethylformamide), were synthesized using solvothermal methodology. Coordination polymers demonstrate the rare xah or 4,6T187 topology of a 3D framework. The homoleptic 2D-coordination polymer [(La2(pQ)3)·4DMF]n was obtained as a by-product in the course of synthetic procedure optimization. The thermal stability, spectral characteristics and porosity of coordination polymers were investigated.
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Affiliation(s)
- Olesya Y. Trofimova
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences, Tropinin Str., 49, 603137 Nizhny Novgorod, Russia; (O.Y.T.); (A.V.M.); (I.V.E.); (A.V.C.); (G.K.F.)
| | - Arina V. Maleeva
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences, Tropinin Str., 49, 603137 Nizhny Novgorod, Russia; (O.Y.T.); (A.V.M.); (I.V.E.); (A.V.C.); (G.K.F.)
| | - Irina V. Ershova
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences, Tropinin Str., 49, 603137 Nizhny Novgorod, Russia; (O.Y.T.); (A.V.M.); (I.V.E.); (A.V.C.); (G.K.F.)
| | - Anton V. Cherkasov
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences, Tropinin Str., 49, 603137 Nizhny Novgorod, Russia; (O.Y.T.); (A.V.M.); (I.V.E.); (A.V.C.); (G.K.F.)
| | - Georgy K. Fukin
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences, Tropinin Str., 49, 603137 Nizhny Novgorod, Russia; (O.Y.T.); (A.V.M.); (I.V.E.); (A.V.C.); (G.K.F.)
| | - Rinat R. Aysin
- A. N. Nesmeyanov Institute of Organometallic Chemistry of the Russian Academy of Sciences, Vavilova Str., 28, 119991 Moscow, Russia;
| | - Konstantin A. Kovalenko
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of Russian Academy of Sciences, Acad. Lavrentiev Ave., 3, 630090 Novosibirsk, Russia;
| | - Alexandr V. Piskunov
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences, Tropinin Str., 49, 603137 Nizhny Novgorod, Russia; (O.Y.T.); (A.V.M.); (I.V.E.); (A.V.C.); (G.K.F.)
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6
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Liu CM, Hao X. Magnetic relaxation in two chain-like Zn2Dy2 Schiff base coordination polymers bridged by tetraoxolene and its one-electron reduced radical. NEW J CHEM 2021. [DOI: 10.1039/d1nj04299h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two chain-like Zn–Dy anilate radical coordination polymers with Schiff base ligands show magnetic relaxation behaviors.
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Affiliation(s)
- Cai-Ming Liu
- Beijing National Laboratory for Molecular Sciences, Center for Molecular Science, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- School of Chemical Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiang Hao
- Beijing National Laboratory for Molecular Sciences, Center for Molecular Science, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
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Amin Mir M, Kumar A, Madwal SP, Jassal M. Synthesis, Spectral analysis and Anti-microbial properties of Cu, Ag, Au complexes of 2, 5-dihydroxy-1, 4-benzoquinone and 3, 6-dichloro-2, 6-dihydroxy-1, 4-benzoquinone. RESULTS IN CHEMISTRY 2021. [DOI: 10.1016/j.rechem.2021.100209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022] Open
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Milašinović V, Jurić M, Molčanov K. Nitrochloranilic acid: a novel asymmetrically substituted quinoid bridging ligand for design of coordination polymers. CrystEngComm 2021. [DOI: 10.1039/d1ce00157d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of alkali salts and transition metal complexes of a novel asymmetrically substituted quinoid ligand, 3-nitro-6-chloro-2,5-dihydroxyquinone (nitrochloranilic acid, H2NCA) was prepared and characterised.
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Haiduc I. Inverse coordination chemistry: oxocarbons, other polyoxo carbocyclic molecules and oxygen heterocycles as coordination centers. Topology and systematization. J COORD CHEM 2020. [DOI: 10.1080/00958972.2020.1825697] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Ionel Haiduc
- Facultatea de Chimie, Universitatea Babeş-Bolyai, Cluj-Napoca, Romania
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Kanižaj L, Vuković V, Wenger E, Jurić M, Molčanov K. Analysis of supramolecular interactions directing crystal packing of novel mononuclear chloranilate-based complexes: Different types of hydrogen bonding and π-stacking. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114723] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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11
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Okhlopkova LS, Poddel’sky AI, Smolyaninov IV, Fukin GK. Triphenylantimony(V) Catecholates Based on 3,6-Di-tert-Butyl-2,5-Dihydroxy-1,4-Benzoquinone. RUSS J COORD CHEM+ 2020. [DOI: 10.1134/s107032842005005x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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12
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Kharitonov AD, Trofimova OY, Meshcheryakova IN, Fukin GK, Khrizanforov MN, Budnikova YH, Bogomyakov AS, Aysin RR, Kovalenko KA, Piskunov AV. 2D-metal–organic coordination polymers of lanthanides (La( iii), Pr( iii) and Nd( iii)) with redox-active dioxolene bridging ligands. CrystEngComm 2020. [DOI: 10.1039/d0ce00767f] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
2D-coordination redox-active networks bearingt-Bu-substituted anilic bridged ligands and lanthanide ions were synthesized and characterized.
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Affiliation(s)
- Alexandr D. Kharitonov
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences
- Nizhny Novgorod
- Russian Federation
| | - Olesya Y. Trofimova
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences
- Nizhny Novgorod
- Russian Federation
| | - Irina N. Meshcheryakova
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences
- Nizhny Novgorod
- Russian Federation
| | - Georgy K. Fukin
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences
- Nizhny Novgorod
- Russian Federation
| | - Mikhail N. Khrizanforov
- A.E. Arbuzov Institute of Organic and Physical Chemistry
- Kazan Scientific Center
- Russian Academy of Sciences
- Kazan
- Russian Federation
| | - Yulia H. Budnikova
- A.E. Arbuzov Institute of Organic and Physical Chemistry
- Kazan Scientific Center
- Russian Academy of Sciences
- Kazan
- Russian Federation
| | - Artem S. Bogomyakov
- International Tomography Center SB RAS
- Novosibirsk
- Novosibirsk
- Russian Federation
| | - Rinat R. Aysin
- A.N. Nesmeyanov Institute of Organometallic Chemistry of Russian Academy of Sciences
- Moscow
- Russian Federation
| | - Konstantin A. Kovalenko
- Nikolaev Institute of Inorganic Chemistry
- Siberian Branch of Russian Academy of Sciences
- Novosibirsk
- Russian Federation
| | - Alexandr V. Piskunov
- G. A. Razuvaev Institute of Organometallic Chemistry of the Russian Academy of Sciences
- Nizhny Novgorod
- Russian Federation
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Kumar M, Wu LH, Kariem M, Franconetti A, Sheikh HN, Liu SJ, Sahoo SC, Frontera A. A Series of Lanthanide-Based Metal-Organic Frameworks Derived from Furan-2,5-dicarboxylate and Glutarate: Structure-Corroborated Density Functional Theory Study, Magnetocaloric Effect, Slow Relaxation of Magnetization, and Luminescent Properties. Inorg Chem 2019; 58:7760-7774. [PMID: 31145613 DOI: 10.1021/acs.inorgchem.9b00219] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Herein, through a dual-ligand strategy, we report eight isorecticular lanthanide(III) furan-2,5-dicarboxylic acid metal-organic frameworks (Ln-MOFs) with the general formula {[Ln(2,5-FDA)0.5(Glu)(H2O)2]· xH2O} n [Ln = Sm (1), Eu (2), Gd (3), Tb (4), Dy (5), Ho (6), Er (7), and Yb (8); 2,5-FDA2- = furan-2,5-dicarboxylate and Glu2- = glutarate; x = 0.5 for 1, 2, and 4 and x = 0 for 3 and 5-8], synthesized under solvothermal conditions by using an N, N'-dimethylformamide/H2O mixed solvent system. Crystallographic data reveal that all eight Ln-MOFs 1-8 crystallize in the orthorhombic Pnma space group. All of the MOFs are isostructural as well as isomorphous with distorted monocapped square-antiprismatic geometry around the Ln1 metal center. In Ln-MOFs 1-8, the 2,5-FDA2- and Glu2- ligands exhibit μ2-κ4,η1:η1:η1:η1 and μ3-κ5,η2:η1:η1:η1 coordination modes, respectively. Topologically, assembled Ln-MOFs 1-8 consist of the 2D cem topological type. The designed Ln-MOFs 1-8 are further explored for structure-corroborated density functional theory study. Meanwhile, room temperature photoluminescence properties of Ln-MOFs 2 and 4 and magnetic properties of Ln-MOFs 3 and 5 have been explored in detail. A highly intense, ligand-sensitized, Ln3+ f-f photoluminescence emission is exhibited by Ln-MOFs 2 [Eu3+ (red emission)] and 4 [Tb3+ (green emission)]. Magnetic studies suggest weak antiferro- and ferromagnetic interactions between adjacent GdIII ions in Ln-MOF 3, thereby displaying a large magnetocaloric effect. The magnetic data measured at T = 2 K and Δ H = 30 kOe depict that the -Δ Sm value per unit mass reaches 32.1 J kg-1 K-1, which is larger than most of the GdIII-based complexes reported. The alternating-current susceptibility measurements on Ln-MOF 5 revealed that out-of-phase signals are frequency- and temperature-dependent under both 0 and 2 kOe direct-current fields, thereby suggesting a typical slow magnetic relaxation behavior with two relaxation processes. This is further supported by the Cole-Cole plots at 2.4-6 K.
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Affiliation(s)
- Manesh Kumar
- Department of Chemistry , University of Jammu , Baba Sahib Ambedkar Road , Jammu 180006 , India
| | - Lin-Hui Wu
- School of Chemistry and Chemical Engineering , Jiangxi University of Science and Technology , Ganzhou 341000 , Jiangxi Province , P. R. China
| | - Mukaddus Kariem
- Department of Chemistry , University of Jammu , Baba Sahib Ambedkar Road , Jammu 180006 , India
| | - Antonio Franconetti
- Department of Chemistry , Universitat de les Illes Balears (UIB) , Palma (Baleares) 07122 , Spain
| | - Haq Nawaz Sheikh
- Department of Chemistry , University of Jammu , Baba Sahib Ambedkar Road , Jammu 180006 , India
| | - Sui-Jun Liu
- School of Chemistry and Chemical Engineering , Jiangxi University of Science and Technology , Ganzhou 341000 , Jiangxi Province , P. R. China
| | - Subash Chandra Sahoo
- Department of Chemistry & Centre of Advanced Studies in Chemistry , Panjab University , Chandigarh 160014 , India
| | - Antonio Frontera
- Department of Chemistry , Universitat de les Illes Balears (UIB) , Palma (Baleares) 07122 , Spain
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Milašinović V, Molčanov K. Nitranilic acid as a basis for construction of coordination polymers: from discrete monomers to 3D networks. CrystEngComm 2019. [DOI: 10.1039/c9ce00209j] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Six novel transition metal complexes of nitranilic acid, a highly versatile ligand, were studied. Topologies of coordination polymers ranging from 0D (discrete monomers) to 3D were observed.
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Kumar M, Sheikh HN, Fraconetti A, Zaręba JK, Sahoo SC, Frontera A. 2,5-Furandicarboxylic acid as a linker for lanthanide coordination polymers: the role of heteroaromatic π–π stacking and hydrogen bonding. NEW J CHEM 2019. [DOI: 10.1039/c8nj05701j] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Heteroaromatic carboxylate ligands are very intriguing components of coordination assemblies such as coordination polymers (CPs) due to their inherently multitopic structures.
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Affiliation(s)
- Manesh Kumar
- Department of Chemistry, University of Jammu
- Jammu-180006
- India
| | | | - Antonio Fraconetti
- Department of Chemistry, Universitat de les Illes Balears
- 07122 Palma (Baleares)
- Spain
| | - Jan K. Zaręba
- Advanced Materials Engineering and Modelling Group, Wroclaw University of Science and Technology
- Wrocław
- Poland
| | - Subash Chandra Sahoo
- Department of Chemistry & Centre of Advanced Studies in Chemistry, Panjab University
- Chandigarh-160 014
- India
| | - Antonio Frontera
- Department of Chemistry, Universitat de les Illes Balears
- 07122 Palma (Baleares)
- Spain
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Loukopoulos E, Kostakis GE. Review: Recent advances of one-dimensional coordination polymers as catalysts. J COORD CHEM 2018. [DOI: 10.1080/00958972.2018.1439163] [Citation(s) in RCA: 49] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Edward Loukopoulos
- Department of Chemistry, School of Life Sciences, University of Sussex, Brighton, UK
| | - George E. Kostakis
- Department of Chemistry, School of Life Sciences, University of Sussex, Brighton, UK
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