1
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Lu Y, Hua MZ, Luo Y, Lu X, Liu Q. Hybrid paper/PDMS microfluidic device integrated with RNA extraction and recombinase polymerase amplification for detection of norovirus in foods. Appl Environ Microbiol 2024:e0120824. [PMID: 39377590 DOI: 10.1128/aem.01208-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2024] [Accepted: 09/22/2024] [Indexed: 10/09/2024] Open
Abstract
Human norovirus (HuNoV) is recognized as the leading causative agent of foodborne outbreaks of epidemic gastroenteritis. Consequently, there is a high demand for developing point-of-care testing for HuNoV. We developed an origami microfluidic device that facilitates rapid detection of murine norovirus 1 (MNV-1), a surrogate for HuNoV, encompassing the entire process from sample preparation to result visualization. This process includes RNA absorption via a paper strip, RNA amplification using recombinase polymerase amplification (RPA), and a lateral flow assay for signal readout. The on-chip detection of MNV-1 was completed within 35 min, demonstrating 100% specificity to MNV-1 in our settings. The detection limit of this microfluidic device for MNV-1 was 200 PFU/mL, comparable to the in-tube RPA reaction. It also successfully detected MNV-1 in lettuce and raspberries at concentrations of 170 PFU/g and 230 PFU/g, respectively, without requiring extra concentration steps. This device demonstrates high compatibility with isothermal nucleic acid amplification and holds significant potential for detecting foodborne viruses in agri-food products in remote and resource-limited settings. IMPORTANCE HuNoV belongs to the family of Caliciviridae and is a leading cause of acute gastroenteritis that can be transmitted through contaminated foods. HuNoV causes around one out of five cases of acute gastroenteritis that lead to diarrhea and vomiting, placing a substantial burden on the healthcare system worldwide. HuNoV outbreaks can occur when food is contaminated at the source (e.g., wild mussels exposed to polluted water), on farms (e.g., during crop cultivation, harvesting, or livestock handling), during packaging, or at catered events. The research outcomes of this study expand the approaches of HuNoV testing, adding value to the framework for routine testing of food products. This microfluidic device can facilitate the monitoring of HuNoV outbreaks, reduce the economic loss of the agri-food industry, and enhance food safety.
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Affiliation(s)
- Yuxiao Lu
- Institute of Parasitology, McGill University, Sainte-Anne-de-Bellevue, Quebec, Canada
- Department of Food Science and Agricultural Chemistry, McGill University, Sainte-Anne-de-Bellevue, Quebec, Canada
| | - Marti Z Hua
- Department of Food Science and Agricultural Chemistry, McGill University, Sainte-Anne-de-Bellevue, Quebec, Canada
| | - Yuhang Luo
- Institute of Parasitology, McGill University, Sainte-Anne-de-Bellevue, Quebec, Canada
| | - Xiaonan Lu
- Department of Food Science and Agricultural Chemistry, McGill University, Sainte-Anne-de-Bellevue, Quebec, Canada
| | - Qian Liu
- Institute of Parasitology, McGill University, Sainte-Anne-de-Bellevue, Quebec, Canada
- McGill Centre for Viral Diseases, Lady Davis Institute, Jewish General Hospital, Montreal, Quebec, Canada
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2
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Holliday EG, Zhang B. Machine learning-enabled colorimetric sensors for foodborne pathogen detection. ADVANCES IN FOOD AND NUTRITION RESEARCH 2024; 111:179-213. [PMID: 39103213 DOI: 10.1016/bs.afnr.2024.06.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/07/2024]
Abstract
In the past decade, there have been various advancements to colorimetric sensors to improve their potential applications in food and agriculture. One application of growing interest is sensing foodborne pathogens. There are unique considerations for sensing in the food industry, including food sample destruction, specificity amidst a complex food matrix, and high sensitivity requirements. Incorporating novel technology, such as nanotechnology, microfluidics, and smartphone app development, into colorimetric sensing methodology can enhance sensor performance. Nonetheless, there remain challenges to integrating sensors with existing food safety infrastructure. Recently, increasingly advanced machine learning techniques have been employed to facilitate nondestructive, multiplex detection for feasible assimilation of sensors into the food industry. With its ability to analyze and make predictions from highly complex data, machine learning holds potential for advanced yet practical colorimetric sensing of foodborne pathogens. This article summarizes recent developments and hurdles of machine learning-enabled colorimetric foodborne pathogen sensing. These advancements underscore the potential of interdisciplinary, cutting-edge technology in providing safer and more efficient food systems.
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Affiliation(s)
- Emma G Holliday
- Food Science and Human Nutrition Department, University of Florida, Gainesville, FL, United States
| | - Boce Zhang
- Food Science and Human Nutrition Department, University of Florida, Gainesville, FL, United States.
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3
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Malik S, Singh J, Saini K, Chaudhary V, Umar A, Ibrahim AA, Akbar S, Baskoutas S. Paper-based sensors: affordable, versatile, and emerging analyte detection platforms. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2024; 16:2777-2809. [PMID: 38639474 DOI: 10.1039/d3ay02258g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/20/2024]
Abstract
Paper-based sensors, often referred to as paper-based analytical devices (PADs), stand as a transformative technology in the field of analytical chemistry. They offer an affordable, versatile, and accessible solution for diverse analyte detection. These sensors harness the unique properties of paper substrates to provide a cost-effective and adaptable platform for rapid analyte detection, spanning chemical species, biomolecules, and pathogens. This review highlights the key attributes that make paper-based sensors an attractive choice for analyte detection. PADs demonstrate their versatility by accommodating a wide range of analytes, from ions and gases to proteins, nucleic acids, and more, with customizable designs for specific applications. Their user-friendly operation and minimal infrastructure requirements suit point-of-care diagnostics, environmental monitoring, food safety, and more. This review also explores various fabrication methods such as inkjet printing, wax printing, screen printing, dip coating, and photolithography. Incorporating nanomaterials and biorecognition elements promises even more sophisticated and sensitive applications.
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Affiliation(s)
- Sumit Malik
- Department of Chemistry, Maharishi Markandeshwar (Deemed to be University), Mullana, Ambala, 133203, Haryana, India.
| | - Joginder Singh
- Department of Chemistry, Maharishi Markandeshwar (Deemed to be University), Mullana, Ambala, 133203, Haryana, India.
| | - Kajal Saini
- Department of Chemistry, Maharishi Markandeshwar (Deemed to be University), Mullana, Ambala, 133203, Haryana, India.
| | - Vivek Chaudhary
- Department of Chemistry, Maharishi Markandeshwar (Deemed to be University), Mullana, Ambala, 133203, Haryana, India.
| | - Ahmad Umar
- Department of Chemistry, Faculty of Science and Arts, Promising Centre for Sensors and Electronic Devices (PCSED), Najran University, Najran-11001, Kingdom of Saudi Arabia.
- Department of Materials Science and Engineering, The Ohio State University, Columbus 43210, OH, USA
- STEM Pioneers Training Lab, Najran University, Najran 11001, Kingdom of Saudi Arabia
| | - Ahmed A Ibrahim
- Department of Chemistry, Faculty of Science and Arts, Promising Centre for Sensors and Electronic Devices (PCSED), Najran University, Najran-11001, Kingdom of Saudi Arabia.
- STEM Pioneers Training Lab, Najran University, Najran 11001, Kingdom of Saudi Arabia
| | - Sheikh Akbar
- Department of Materials Science and Engineering, The Ohio State University, Columbus 43210, OH, USA
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4
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Hong B, Wang W, Li Y, Ma Y, Wang J. Specific separation and sensitive detection of foodborne pathogens by phage-derived bacterial-binding protein-nano magnetic beads coupled with smartphone-assisted paper sensor. Biosens Bioelectron 2024; 247:115911. [PMID: 38118305 DOI: 10.1016/j.bios.2023.115911] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 11/30/2023] [Accepted: 12/02/2023] [Indexed: 12/22/2023]
Abstract
Foodborne pathogen infection poses a significant threat to public health and is considered as one of the most serious hazards in global food safety. Herein, a sensitive and efficient method for on-site monitoring of foodborne pathogens was developed by using a smartphone-assisted paper-sensor combined with phage-derived bacterial-binding proteins-nano magnetic beads (PBPs-MBs). PBPs including tail fiber protein (TFP:gp13), cell-wall binding domain (CBD) of endolysin and tailspike protein (TSP) coated on the surface of MBs were applied for rapid separation and enrichment of targeted bacteria (Escherichia coli O157:H7, Staphylococcus aureus and Salmonella typhimurium, respectively) from food samples in 20 min before detection on paper-based sensors. The paper-based sensor was loaded with the lytic agent (polymyxin B) to induce bacterial lysis and release specific endogenous enzymes. Subsequently, three distinct chromogenic substrates were hydrolyzed by their corresponding enzymes, resulting in characteristic color changes on the paper, respectively. In addition, a smartphone APP for red-green-blue (RGB) color analysis of paper was able to directly detect three foodborne pathogens. As a result, the limit of detection (LOD) values for three foodborne pathogens were found to be 2.44 × 102, 2.68 × 104 and 4.62 × 103 CFU/mL, respectively, which were much lower than other studies (106-108 CFU/mL) based on enzymes. Moreover, the feasibility of this approach was further assessed through the successful detection of targeted bacteria in real samples with satisfactory recovery rates. In conclusion, this smartphone-assisted biosensor offers promising application potential for point-of-care testing (POCT) of foodborne pathogens in resource-scarce areas.
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Affiliation(s)
- Bin Hong
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China
| | - Wenhai Wang
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China
| | - Yanmei Li
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China
| | - Yi Ma
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China; Guangdong Provincial Key Laboratory of Fermentation and Enzyme Engineering, South China University of Technology, Guangzhou, China.
| | - Jufang Wang
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China; Guangdong Provincial Key Laboratory of Fermentation and Enzyme Engineering, South China University of Technology, Guangzhou, China.
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5
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Zulu N, Idris AO, Orimolade BO, Nkambule TTI, Mamba BB, Feleni U. Approaches for the Detection of
Escherichia coli
in Wastewater: A Short Review. ChemistrySelect 2023. [DOI: 10.1002/slct.202200598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/05/2023]
Affiliation(s)
- Nokwanda Zulu
- Institute for Nanotechnology and Water Sustainability (iNanoWS), College of Science, Engineering and Technology University of South Africa, Florida Campus 1710 Johannesburg South Africa
| | - Azeez O. Idris
- Institute for Nanotechnology and Water Sustainability (iNanoWS), College of Science, Engineering and Technology University of South Africa, Florida Campus 1710 Johannesburg South Africa
| | - Benjamin O. Orimolade
- Institute for Nanotechnology and Water Sustainability (iNanoWS), College of Science, Engineering and Technology University of South Africa, Florida Campus 1710 Johannesburg South Africa
| | - Thabo T. I. Nkambule
- Institute for Nanotechnology and Water Sustainability (iNanoWS), College of Science, Engineering and Technology University of South Africa, Florida Campus 1710 Johannesburg South Africa
| | - Bhekie B. Mamba
- Institute for Nanotechnology and Water Sustainability (iNanoWS), College of Science, Engineering and Technology University of South Africa, Florida Campus 1710 Johannesburg South Africa
| | - Usisipho Feleni
- Institute for Nanotechnology and Water Sustainability (iNanoWS), College of Science, Engineering and Technology University of South Africa, Florida Campus 1710 Johannesburg South Africa
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Xu Y, Zheng H, Sui J, Lin H, Cao L. Rapid and Sensitive Fluorescence Detection of Staphylococcus aureus Based on Polyethyleneimine-Enhanced Boronate Affinity Isolation. Foods 2023; 12:foods12071366. [PMID: 37048187 PMCID: PMC10093574 DOI: 10.3390/foods12071366] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Revised: 03/18/2023] [Accepted: 03/21/2023] [Indexed: 04/14/2023] Open
Abstract
There are increasing demands for fast and simple detection of pathogens in foodstuffs. Fluorescence analysis has demonstrated significant advantages for easy operation and high sensitivity, although it is usually hindered by a complex matrix, low bacterial abundance, and long-term bacterial enrichment. Effective enrichment procedures are required to meet the requirements for food detection. Here, boronate-functionalized cellulose filter paper and specific fluorescent probes were combined. An integrated approach for the enrichment of detection of Staphylococcus aureus was proposed. The modification of polyethyleneimine demonstrated a significant effect in enhancing the bacterial enrichment, and the boronate affinity efficiency of the paper was increased by about 51~132%. With optimized conditions, the adsorption efficiency for S. aureus was evaluated as 1.87 × 108 CFU/cm2, the linear range of the fluorescent analysis was 104 CFU/mL~108 CFU/mL (R2 = 0.9835), and the lowest limit of detection (LOD) was calculated as 2.24 × 102 CFU/mL. Such efficiency was validated with milk and yogurt samples. These results indicated that the material had a high enrichment capacity, simple operation, and high substrate tolerance, which had the promising potential to be the established method for the fast detection of food pathogens.
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Affiliation(s)
- Yujia Xu
- Food Safety Laboratory, College of Food Science and Engineering, Ocean University of China, Qingdao 266100, China
| | - Hongwei Zheng
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao 266100, China
| | - Jianxin Sui
- Food Safety Laboratory, College of Food Science and Engineering, Ocean University of China, Qingdao 266100, China
| | - Hong Lin
- Food Safety Laboratory, College of Food Science and Engineering, Ocean University of China, Qingdao 266100, China
| | - Limin Cao
- Food Safety Laboratory, College of Food Science and Engineering, Ocean University of China, Qingdao 266100, China
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7
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Butler D, Kammarchedu V, Zhou K, Peeke L, Lyle L, Snyder DW, Ebrahimi A. Cellulose-Based Laser-Induced Graphene Devices for Electrochemical Monitoring of Bacterial Phenazine Production and Viability. SENSORS AND ACTUATORS. B, CHEMICAL 2023; 378:133090. [PMID: 36644326 PMCID: PMC9835725 DOI: 10.1016/j.snb.2022.133090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
As an easily disposable substrate with a microporous texture, paper is a well-suited, generic substrate to build analytical devices for studying bacteria. Using a multi-pass lasing process, cellulose-based laser-induced graphene (cLIG) with a sheet resistance of 43.7 ± 2.3 Ωsq-1 is developed and utilized in the fabrication of low-cost and environmentally-friendly paper sensor arrays. Two case studies with Pseudomonas aeruginosa and Escherichia coli demonstrate the practicality of the cLIG sensors for the electrochemical analysis of bacteria. The first study measures the time-dependent profile of phenazines released from both planktonic (up to 60 h) and on-chip-grown (up to 22 h) Pseudomonas aeruginosa cultures. While similarities do exist, marked differences in phenazine production are seen with cells grown directly on cLIG compared to the planktonic culture. Moreover, in planktonic cultures, pyocyanin levels increase early on and plateau around 20 h, while optical density measurements increase monotonically over the duration of testing. The second study monitors the viability and metabolic activity of Escherichia coli using a resazurin-based electrochemical assay. These results demonstrate the utility of cLIG paper sensors as an inexpensive and versatile platform for monitoring bacteria and could enable new opportunities in high-throughput antibiotic susceptibility testing, ecological studies, and biofilm studies.
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Affiliation(s)
- Derrick Butler
- Department of Electrical Engineering, The Pennsylvania State University, University Park, PA 16802
- Center for Atomically Thin Multifunctional Coatings, The Pennsylvania State University, University Park, PA 16802
| | - Vinay Kammarchedu
- Department of Electrical Engineering, The Pennsylvania State University, University Park, PA 16802
- Center for Atomically Thin Multifunctional Coatings, The Pennsylvania State University, University Park, PA 16802
- Center for Biodevices, The Pennsylvania State University, University Park, PA 16802
| | - Keren Zhou
- Department of Electrical Engineering, The Pennsylvania State University, University Park, PA 16802
| | - Lachlan Peeke
- Applied Research Laboratory - Electronic Materials and Devices Department, The Pennsylvania State University, University Park, PA 16802
- Department of Materials Science and Engineering, The Pennsylvania State University, University Park, PA 16802
| | - Luke Lyle
- Applied Research Laboratory - Electronic Materials and Devices Department, The Pennsylvania State University, University Park, PA 16802
- Department of Materials Science and Engineering, The Pennsylvania State University, University Park, PA 16802
| | - David W Snyder
- Applied Research Laboratory - Electronic Materials and Devices Department, The Pennsylvania State University, University Park, PA 16802
- Department of Materials Science and Engineering, The Pennsylvania State University, University Park, PA 16802
- Department of Chemical Engineering, The Pennsylvania State University, University Park, PA 16802
| | - Aida Ebrahimi
- Department of Electrical Engineering, The Pennsylvania State University, University Park, PA 16802
- Center for Atomically Thin Multifunctional Coatings, The Pennsylvania State University, University Park, PA 16802
- Center for Biodevices, The Pennsylvania State University, University Park, PA 16802
- Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802
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8
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Mazur F, Tjandra AD, Zhou Y, Gao Y, Chandrawati R. Paper-based sensors for bacteria detection. NATURE REVIEWS BIOENGINEERING 2023; 1:180-192. [PMID: 36937095 PMCID: PMC9926459 DOI: 10.1038/s44222-023-00024-w] [Citation(s) in RCA: 21] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 01/09/2023] [Indexed: 02/16/2023]
Abstract
The detection of pathogenic bacteria is essential to prevent and treat infections and to provide food security. Current gold-standard detection techniques, such as culture-based assays and polymerase chain reaction, are time-consuming and require centralized laboratories. Therefore, efforts have focused on developing point-of-care devices that are fast, cheap, portable and do not require specialized training. Paper-based analytical devices meet these criteria and are particularly suitable to deployment in low-resource settings. In this Review, we highlight paper-based analytical devices with substantial point-of-care applicability for bacteria detection and discuss challenges and opportunities for future development.
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Affiliation(s)
- Federico Mazur
- School of Chemical Engineering and Australian Centre for Nanomedicine (ACN), The University of New South Wales, Sydney, New South Wales Australia
| | - Angie Davina Tjandra
- School of Chemical Engineering and Australian Centre for Nanomedicine (ACN), The University of New South Wales, Sydney, New South Wales Australia
| | - Yingzhu Zhou
- School of Chemical Engineering and Australian Centre for Nanomedicine (ACN), The University of New South Wales, Sydney, New South Wales Australia
| | - Yuan Gao
- School of Chemical Engineering and Australian Centre for Nanomedicine (ACN), The University of New South Wales, Sydney, New South Wales Australia
| | - Rona Chandrawati
- School of Chemical Engineering and Australian Centre for Nanomedicine (ACN), The University of New South Wales, Sydney, New South Wales Australia
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9
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Silva-Neto HA, Arantes IV, Ferreira AL, do Nascimento GH, Meloni GN, de Araujo WR, Paixão TR, Coltro WK. Recent advances on paper-based microfluidic devices for bioanalysis. Trends Analyt Chem 2022. [DOI: 10.1016/j.trac.2022.116893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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10
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Pan Y, Mao K, Hui Q, Wang B, Cooper J, Yang Z. Paper-based devices for rapid diagnosis and wastewater surveillance. Trends Analyt Chem 2022. [DOI: 10.1016/j.trac.2022.116760] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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11
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Kim DM, Yoo SM. Colorimetric Systems for the Detection of Bacterial Contamination: Strategy and Applications. BIOSENSORS 2022; 12:bios12070532. [PMID: 35884335 PMCID: PMC9313054 DOI: 10.3390/bios12070532] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2022] [Revised: 07/10/2022] [Accepted: 07/13/2022] [Indexed: 12/19/2022]
Abstract
Bacterial contamination is a public health concern worldwide causing enormous social and economic losses. For early diagnosis and adequate management to prevent or treat pathogen-related illnesses, extensive effort has been put into the development of pathogenic bacterial detection systems. Colorimetric sensing systems have attracted increasing attention due to their simple and single-site operation, rapid signal readout with the naked eye, ability to operate without external instruments, portability, compact design, and low cost. In this article, recent trends and advances in colorimetric systems for the detection and monitoring of bacterial contamination are reviewed. This article focuses on pathogen detection strategies and technologies based on reaction factors that affect the color change for visual readout. Reactions used in each strategy are introduced by dividing them into the following five categories: external pH change-induced pH indicator reactions, intracellular enzyme-catalyzed chromogenic reactions, enzyme-like nanoparticle (NP)-catalyzed substrate reactions, NP aggregation-based reactions, and NP accumulation-based reactions. Some recently developed colorimetric systems are introduced, and their challenges and strategies to improve the sensing performance are discussed.
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Affiliation(s)
- Dong-Min Kim
- Center for Applied Life Science, Hanbat National University, Daejeon 34158, Korea;
| | - Seung-Min Yoo
- School of Integrative Engineering, Chung-Ang University, Seoul 06974, Korea
- Correspondence:
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12
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Ngashangva L, Hemdan BA, El-Liethy MA, Bachu V, Minteer SD, Goswami P. Emerging Bioanalytical Devices and Platforms for Rapid Detection of Pathogens in Environmental Samples. MICROMACHINES 2022; 13:mi13071083. [PMID: 35888900 PMCID: PMC9321031 DOI: 10.3390/mi13071083] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/18/2022] [Revised: 07/04/2022] [Accepted: 07/05/2022] [Indexed: 02/05/2023]
Abstract
The development of robust bioanalytical devices and biosensors for infectious pathogens is progressing well with the advent of new materials, concepts, and technology. The progress is also stepping towards developing high throughput screening technologies that can quickly identify, differentiate, and determine the concentration of harmful pathogens, facilitating the decision-making process for their elimination and therapeutic interventions in large-scale operations. Recently, much effort has been focused on upgrading these analytical devices to an intelligent technological platform by integrating them with modern communication systems, such as the internet of things (IoT) and machine learning (ML), to expand their application horizon. This review outlines the recent development and applications of bioanalytical devices and biosensors to detect pathogenic microbes in environmental samples. First, the nature of the recent outbreaks of pathogenic microbes such as foodborne, waterborne, and airborne pathogens and microbial toxins are discussed to understand the severity of the problems. Next, the discussion focuses on the detection systems chronologically, starting with the conventional methods, advanced techniques, and emerging technologies, such as biosensors and other portable devices and detection platforms for pathogens. Finally, the progress on multiplex assays, wearable devices, and integration of smartphone technologies to facilitate pathogen detection systems for wider applications are highlighted.
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Affiliation(s)
- Lightson Ngashangva
- Transdisciplinary Biology, Rajiv Gandhi Centre for Biotechnology (RGCB), Thiruvanthapuram, Kerala 695014, India;
| | - Bahaa A. Hemdan
- Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India; (B.A.H.); (V.B.)
- Water Pollution Research Department, Environmental and Climate Change Research Institute, National Research Centre, 33 El Buhouth Street, Cairo P.O. Box 12622, Egypt;
| | - Mohamed Azab El-Liethy
- Water Pollution Research Department, Environmental and Climate Change Research Institute, National Research Centre, 33 El Buhouth Street, Cairo P.O. Box 12622, Egypt;
| | - Vinay Bachu
- Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India; (B.A.H.); (V.B.)
| | - Shelley D. Minteer
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, UT 84112, USA
- Correspondence: (S.D.M.); (P.G.)
| | - Pranab Goswami
- Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India; (B.A.H.); (V.B.)
- Correspondence: (S.D.M.); (P.G.)
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Santos M, Mariz M, Tiago I, Martins J, Alarico S, Ferreira P. A review on urinary tract infections diagnostic methods: Laboratory-based and point-of-care approaches. J Pharm Biomed Anal 2022; 219:114889. [PMID: 35724611 DOI: 10.1016/j.jpba.2022.114889] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Revised: 05/18/2022] [Accepted: 06/11/2022] [Indexed: 02/07/2023]
Abstract
Urinary tract infections (UTIs) are among the most common infectious diseases worldwide. This type of infections can be healthcare-associated or community-acquired and affects millions of people every year. Different diagnostic procedures are available to detect pathogens in urine and they can be divided into two main categories: laboratory-based and point-of-care (POC) detection techniques. Traditional methodologies are often time-consuming, thus, achieving a rapid and accurate identification of pathogens is a challenging feature that has been pursued by many research groups and companies operating in this area. The purpose of this review is to compare and highlight advantages and disadvantages of the traditional and currently most used detection methods, as well as the emerging POC approaches and the relevant advances in on-site detection of pathogens´ mechanisms, suitable to be adapted to UTI diagnosis. Lately, the commercially available UTI self-testing kits and devices are helping in the diagnosis of urinary infections as patients or care givers are able to perform the test, easily and comfortably at home and, upon the result, decide when to attend an appointment/Urgent Health Care Unit.
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Affiliation(s)
- Marta Santos
- CIEPQPF, Chemical Engineering Department, University of Coimbra, 3030-790 Coimbra, Portugal
| | - Marcos Mariz
- CIEPQPF, Chemical Engineering Department, University of Coimbra, 3030-790 Coimbra, Portugal
| | - Igor Tiago
- CFE, Centre for Functional Ecology (CFE), Department of Life Sciences, University of Coimbra, Coimbra, Portugal
| | - Jimmy Martins
- Faculty of Medicine and Biomedical Sciences, University of Algarve, 8005-139 Faro, Portugal
| | - Susana Alarico
- CNC, Center for Neuroscience and Cell Biology, University of Coimbra, 3004-504 Coimbra, Portugal; CIBB, Centre for Innovative Biomedicine and Biotechnology, University of Coimbra, 3004-504 Coimbra, Portugal; IIIUC, Institute for Interdisciplinary Research, University of Coimbra, 3004-504 Coimbra, Portugal.
| | - Paula Ferreira
- CIEPQPF, Chemical Engineering Department, University of Coimbra, 3030-790 Coimbra, Portugal; Department of Chemical and Biological Engineering, Coimbra Institute of Engineering, 3030-199 Coimbra, Portugal.
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14
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Technique Evolutions for Microorganism Detection in Complex Samples: A Review. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12125892] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Rapid detection of microorganisms is a major challenge in the medical and industrial sectors. In a pharmaceutical laboratory, contamination of medical products may lead to severe health risks for patients, such as sepsis. In the specific case of advanced therapy medicinal products, contamination must be detected as early as possible to avoid late production stop and unnecessary costs. Unfortunately, the conventional methods used to detect microorganisms are based on time-consuming and labor-intensive approaches. Therefore, it is important to find new tools to detect microorganisms in a shorter time frame. This review sums up the current methods and represents the evolution in techniques for microorganism detection. First, there is a focus on promising ligands, such as aptamers and antimicrobial peptides, cheaper to produce and with a broader spectrum of detection. Then, we describe methods achieving low limits of detection, thanks to Raman spectroscopy or precise handling of samples through microfluids devices. The last part is dedicated to techniques in real-time, such as surface plasmon resonance, preventing the risk of contamination. Detection of pathogens in complex biological fluids remains a scientific challenge, and this review points toward important areas for future research.
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15
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Hosseini A, Mas J. The β-galactosidase assay in perspective: Critical thoughts for biosensor development. Anal Biochem 2021; 635:114446. [PMID: 34752779 DOI: 10.1016/j.ab.2021.114446] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2021] [Revised: 10/21/2021] [Accepted: 11/01/2021] [Indexed: 01/24/2023]
Abstract
Recently, the β-galactosidase assay has become a key component in the development of assays and biosensors for the detection of enterobacteria and E. coli in water quality monitoring. The assay has often performed below its maximum potential, mainly due to a poor choice of conditions. In this study we establish a set of optimal conditions and provide a rough estimate of how departure from optimal values reduces the output of the assay potentially decreasing its sensitivity. We have established that maximum response for detecting low cell concentrations requires an induction of the samples using IPTG at a concentration of 0.2 mM during 180 min. Permeabilization of the samples is mandatory as lack of it results in an almost 60% reduction in assay output. The choice of enzyme substrate is critical as different substrates yield products with different extinction coefficients or fluorescence yields. The concentration of substrate used must be high enough (around 3 to 4 times Km) to ensure that the activity measured is not substrate limited. Finally, as the color/fluorescence of the reaction products is highly dependent on pH, care must be taken to ensure that pH at the time of reading is high enough to provide maximum signal.
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Affiliation(s)
- Anahita Hosseini
- Department of Genetics and Microbiology, Universitat Autònoma de Barcelona (UAB), Bellaterra, Barcelona, Spain.
| | - Jordi Mas
- Department of Genetics and Microbiology, Universitat Autònoma de Barcelona (UAB), Bellaterra, Barcelona, Spain
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16
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Alahmad W, Varanusupakul P, Varanusupakul P. Recent Developments and Applications of Microfluidic Paper-Based Analytical Devices for the Detection of Biological and Chemical Hazards in Foods: A Critical Review. Crit Rev Anal Chem 2021; 53:233-252. [PMID: 34304654 DOI: 10.1080/10408347.2021.1949695] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Nowadays, food safety has become a major concern for the sustainability of global public health. Through the production and distribution steps, food can be contaminated by either chemical hazards or pathogens, and the determination of these plays a critical role in the processes of ensuring food safety. Therefore, the development of analytical tools that can provide rapid screening of these hazards is highly necessary. Microfluidic paper-based analytical devices (µPADs) have advanced significantly in recent years as they are rapid and low-cost analytical screening tools for testing contaminated food products. This review focuses on recent developments of µPADs for various applications in the food safety field. A description of the fabrication of selected papers is briefly discussed, and evaluation of the μPADs' performance with regard to their precision and accuracy as well as their limits of detection is critically assessed. The advantages and disadvantages of these devices are highlighted.
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Affiliation(s)
- Waleed Alahmad
- Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
| | | | - Pakorn Varanusupakul
- Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
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17
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Xu Y, Hassan MM, Sharma AS, Li H, Chen Q. Recent advancement in nano-optical strategies for detection of pathogenic bacteria and their metabolites in food safety. Crit Rev Food Sci Nutr 2021; 63:486-504. [PMID: 34281447 DOI: 10.1080/10408398.2021.1950117] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Pathogenic bacteria and their metabolites are the leading risk factor in food safety and are one of the major threats to human health because of the capability of triggering diseases with high morbidity and mortality. Nano-optical sensors for bacteria sensing have been greatly explored with the emergence of nanotechnology and artificial intelligence. In addition, with the rapid development of cross fusion technology, other technologies integrated nano-optical sensors show great potential in bacterial and their metabolites sensing. This review focus on nano-optical strategies for bacteria and their metabolites sensing in the field of food safety; based on surface-enhanced Raman scattering (SERS), fluorescence, and colorimetric biosensors, and their integration with the microfluidic platform, electrochemical platform, and nucleic acid amplification platform in the recent three years. Compared with the traditional techniques, nano optical-based sensors have greatly improved the sensitivity with reduced detection time and cost. However, challenges remain for the simple fabrication of biosensors and their practical application in complex matrices. Thus, bringing out improvements or novelty in the pretreatment methods will be a trend in the upcoming future.
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Affiliation(s)
- Yi Xu
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang, People's Republic of China
| | - Md Mehedi Hassan
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang, People's Republic of China
| | - Arumugam Selva Sharma
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang, People's Republic of China
| | - Huanhuan Li
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang, People's Republic of China
| | - Quansheng Chen
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang, People's Republic of China
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18
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Petrucci S, Costa C, Broyles D, Dikici E, Daunert S, Deo S. On-site detection of food and waterborne bacteria - current technologies, challenges, and future directions. Trends Food Sci Technol 2021; 115:409-421. [PMID: 34267423 DOI: 10.1016/j.tifs.2021.06.054] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
With the rise in outbreaks of pathogenic bacteria in both food and water resulting in an increased instance of infection, there is a growing public health problem in both developed and developing countries. In this increasing threat the most effective method for control and prevention is rapid and cost-effective detection. Research has shifted in recent years towards the development of rapid and on-site assays for the detection of these kinds of bacteria. However, there are still some limitations in the implementation of these assays in the field. This article discusses the current on-site detection methods. Current scope of advancements and limitations in the development or use of these on-site technologies for food and waterborne bacterial detection is evaluated in this study. With the continued development of these technologies, on-site detection will continue to impact many areas of public health. As these methods continue to improve and diversify further, on-site detection could become more widely implemented in food and water analysis.
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Affiliation(s)
- Sabrina Petrucci
- Department of Biochemistry and Molecular Biology, Miller School of Medicine, University of Miami, Miami, FL 33136 United States.,Dr. John T. MacDonald Foundation Biomedical Nanotechnology Institute, Miller School of Medicine, University of Miami, Miami, FL 33136 United States
| | - Connor Costa
- Department of Biochemistry and Molecular Biology, Miller School of Medicine, University of Miami, Miami, FL 33136 United States.,Dr. John T. MacDonald Foundation Biomedical Nanotechnology Institute, Miller School of Medicine, University of Miami, Miami, FL 33136 United States
| | - David Broyles
- Department of Biochemistry and Molecular Biology, Miller School of Medicine, University of Miami, Miami, FL 33136 United States.,Dr. John T. MacDonald Foundation Biomedical Nanotechnology Institute, Miller School of Medicine, University of Miami, Miami, FL 33136 United States
| | - Emre Dikici
- Department of Biochemistry and Molecular Biology, Miller School of Medicine, University of Miami, Miami, FL 33136 United States.,Dr. John T. MacDonald Foundation Biomedical Nanotechnology Institute, Miller School of Medicine, University of Miami, Miami, FL 33136 United States
| | - Sylvia Daunert
- Department of Biochemistry and Molecular Biology, Miller School of Medicine, University of Miami, Miami, FL 33136 United States.,Dr. John T. MacDonald Foundation Biomedical Nanotechnology Institute, Miller School of Medicine, University of Miami, Miami, FL 33136 United States.,Clinical and Translational Science Institute, Miller School of Medicine, University of Miami, Miami, FL 33136 United States
| | - Sapna Deo
- Department of Biochemistry and Molecular Biology, Miller School of Medicine, University of Miami, Miami, FL 33136 United States.,Dr. John T. MacDonald Foundation Biomedical Nanotechnology Institute, Miller School of Medicine, University of Miami, Miami, FL 33136 United States
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19
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Ng HY, Lee WC, Kung CT, Li LC, Lee CT, Fu LM. Recent Advances in Microfluidic Devices for Contamination Detection and Quality Inspection of Milk. MICROMACHINES 2021; 12:558. [PMID: 34068982 PMCID: PMC8156775 DOI: 10.3390/mi12050558] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 05/05/2021] [Accepted: 05/11/2021] [Indexed: 02/08/2023]
Abstract
Milk is a necessity for human life. However, it is susceptible to contamination and adulteration. Microfluidic analysis devices have attracted significant attention for the high-throughput quality inspection and contaminant analysis of milk samples in recent years. This review describes the major proposals presented in the literature for the pretreatment, contaminant detection, and quality inspection of milk samples using microfluidic lab-on-a-chip and lab-on-paper platforms in the past five years. The review focuses on the sample separation, sample extraction, and sample preconcentration/amplification steps of the pretreatment process and the determination of aflatoxins, antibiotics, drugs, melamine, and foodborne pathogens in the detection process. Recent proposals for the general quality inspection of milk samples, including the viscosity and presence of adulteration, are also discussed. The review concludes with a brief perspective on the challenges facing the future development of microfluidic devices for the analysis of milk samples in the coming years.
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Affiliation(s)
- Hwee-Yeong Ng
- Division of Nephrology, Kaohsiung Chang Gung Memorial Hospital, College of Medicine, Chang Gung University, Kaohsiung 833, Taiwan; (H.-Y.N.); (W.-C.L.); (L.-C.L.); (C.-T.L.)
| | - Wen-Chin Lee
- Division of Nephrology, Kaohsiung Chang Gung Memorial Hospital, College of Medicine, Chang Gung University, Kaohsiung 833, Taiwan; (H.-Y.N.); (W.-C.L.); (L.-C.L.); (C.-T.L.)
| | - Chia-Te Kung
- Department of Emergency Medicine, Kaohsiung Chang Gung Memorial Hospital, College of Medicine, Chang Gung University, Kaohsiung 833, Taiwan;
| | - Lung-Chih Li
- Division of Nephrology, Kaohsiung Chang Gung Memorial Hospital, College of Medicine, Chang Gung University, Kaohsiung 833, Taiwan; (H.-Y.N.); (W.-C.L.); (L.-C.L.); (C.-T.L.)
| | - Chien-Te Lee
- Division of Nephrology, Kaohsiung Chang Gung Memorial Hospital, College of Medicine, Chang Gung University, Kaohsiung 833, Taiwan; (H.-Y.N.); (W.-C.L.); (L.-C.L.); (C.-T.L.)
| | - Lung-Ming Fu
- Department of Engineering Science, National Cheng Kung University, Tainan 701, Taiwan
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20
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Rani A, Ravindran VB, Surapaneni A, Mantri N, Ball AS. Review: Trends in point-of-care diagnosis for Escherichia coli O157:H7 in food and water. Int J Food Microbiol 2021; 349:109233. [PMID: 34022616 DOI: 10.1016/j.ijfoodmicro.2021.109233] [Citation(s) in RCA: 40] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Revised: 04/27/2021] [Accepted: 04/29/2021] [Indexed: 12/17/2022]
Abstract
Escherichia coli O157:H7, a Shiga-producing E. coli is a major pathogenic E. coli strain which since the early 1980s has become a crucial food and water-borne pathogen. Several management strategies can be applied to control the spread of infection; however early diagnosis represents the optimum preventive strategy to minimize the infection. Therefore, it is crucial to detect this pathogen in a fast and efficient manner in order to reduce the morbidity and mortality. Currently used gold standard tests rely on culture and pre-enrichment of E. coli O157:H7 from the contaminated source; they are time consuming and laborious. Molecular methods such as polymerase chain reaction are sensitive; however, they require expensive instrumentation. Therefore, there is a requirement for Accurate, Sensitive, Specific, User friendly, Rapid, Equipment free and Deliverable (ASSURED) detection methods for use in the laboratory and in the field. Emerging technologies such as isothermal amplification methods, biosensors, surface enhanced Raman Spectroscopy, paper-based diagnostics and smartphone-based digital methods are recognized as new approaches in the field of E. coli O157:H7 diagnostics and are discussed in this review. Mobile PCR and CRISPR-Cas diagnostic platforms have been identified as new tools in E. coli O157:H7 POC diagnostics with the potential for implementation by industry. This review describes advances and progress in the field of E. coli O157:H7 diagnosis in the context of food and water industry. The focus is on emerging high throughput point-of-care (POC) E. coli O157:H7 diagnostics and the requirement for the transformation to service routine diagnostics in the food and water industry.
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Affiliation(s)
- Alka Rani
- ARC Training Centre for the Transformation of Australia's Biosolids Resource, School of Science, RMIT University, Bundoora West, Victoria 3083, Australia.
| | - Vivek B Ravindran
- ARC Training Centre for the Transformation of Australia's Biosolids Resource, School of Science, RMIT University, Bundoora West, Victoria 3083, Australia
| | - Aravind Surapaneni
- ARC Training Centre for the Transformation of Australia's Biosolids Resource, School of Science, RMIT University, Bundoora West, Victoria 3083, Australia; South East Water, Frankston, Victoria 3199, Australia
| | - Nitin Mantri
- The Pangenomics Lab, School of Science, RMIT University, Melbourne, Victoria 3083, Australia
| | - Andrew S Ball
- ARC Training Centre for the Transformation of Australia's Biosolids Resource, School of Science, RMIT University, Bundoora West, Victoria 3083, Australia
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21
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Komatsu T, Sato Y, Maeki M, Ishida A, Tani H, Tokeshi M. Rapid, sensitive universal paper-based device enhances competitive immunoassays of small molecules. Anal Chim Acta 2021; 1144:85-95. [PMID: 33453801 DOI: 10.1016/j.aca.2020.12.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2020] [Revised: 11/26/2020] [Accepted: 12/04/2020] [Indexed: 01/17/2023]
Abstract
Competitive immunoassays comprise the standard means of detecting small molecules. However, conventional methods using microwells are difficult to apply during point-of-care tests (POCT) because they require complicated handling and are time consuming. Although paper-based analytical devices (PAD) have received considerable focus because of their rapid and straightforward operation, only a few devices have been proposed for competitive immunoassays. Herein, we describe a novel universal PAD format with a 3-dimensional configuration for competitive immunoassays that rapidly and sensitively detects small molecules. The proposed device comprised a layered structure with uniform color formation and high capture efficiency between antigen and antibody that results in rapid and reproducible results. The device rapidly (90 s) assayed biotin as a model target, with a limit of detection (LOD) of 5.08 ng mL-1, and detected progesterone with an LOD of 84 pg mL-1 within 5 min. Moreover, sample volumes and reagent consumption rates were minimized. Thus, our device could be applied to competitive immunoassays of various small molecules in POCT.
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Affiliation(s)
- Takeshi Komatsu
- Graduate School of Chemical Sciences and Engineering, Hokkaido University, Kita 13 Nishi 8, Kita, Sapporo, 060-8628, Japan
| | - Yuki Sato
- Graduate School of Chemical Sciences and Engineering, Hokkaido University, Kita 13 Nishi 8, Kita, Sapporo, 060-8628, Japan
| | - Masatoshi Maeki
- Division of Applied Chemistry, Faculty of Engineering, Hokkaido University, Kita 13 Nishi 8, Kita, Sapporo, 060-8628, Japan
| | - Akihiko Ishida
- Division of Applied Chemistry, Faculty of Engineering, Hokkaido University, Kita 13 Nishi 8, Kita, Sapporo, 060-8628, Japan.
| | - Hirofumi Tani
- Division of Applied Chemistry, Faculty of Engineering, Hokkaido University, Kita 13 Nishi 8, Kita, Sapporo, 060-8628, Japan
| | - Manabu Tokeshi
- Division of Applied Chemistry, Faculty of Engineering, Hokkaido University, Kita 13 Nishi 8, Kita, Sapporo, 060-8628, Japan; Innovative Research Centre for Preventive Medical Engineering, Nagoya University, Furo-cho Chikusa, Nagoya, 464-8601, Japan; Institute of Innovation for Future Society, Nagoya University, Furo-cho, Chikusa, Nagoya, 464-8601, Japan.
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22
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Wang CM, Chen CY, Liao WS. Enclosed paper-based analytical devices: Concept, variety, and outlook. Anal Chim Acta 2020; 1144:158-174. [PMID: 33453793 DOI: 10.1016/j.aca.2020.10.007] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2020] [Revised: 09/23/2020] [Accepted: 10/06/2020] [Indexed: 01/19/2023]
Abstract
Paper-based analytical devices possess desirable properties such as low cost, convenient production, and rapid output. These advantages over conventional analytical devices have attracted tremendous attention in recent years, and an abundance of fabrication techniques have been achieved with different designs. Related approaches are adopted by scientists and engineers from different research fields to create practical devices tailored for various applications. Among a diverse selection of strategies, paper-based analytical devices featuring enclosed channels can protect its contents from environmental harm, which is helpful in designing paper-based devices aimed toward practical use. However, superior properties of enclosed device designs have often been neglected when a paper-based platform is selected, and related discussion is still lacking in the field. To fill this empty space in the relevant literature, important issues are highlighted and recent research achievements are included in this article, which should have implication for scientists interested in sensing technology, analytical chemistry, material science, and miniaturized devices. For the convenience of reader's understanding, this article provides a general introduction to the basic properties and concepts of paper-based analytical devices. Firstly, commonly used fabrication strategies and detection methods are mentioned, with an in-depth emphasis on paper-based devices with enclosed channels, including breakthroughs in device types, thoughts on novel fabrication, and practical application examples. Subsequently, other important topics related to enclosed paper-based device design are summarized, and future challenges and opportunities in the field are also discussed.
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Affiliation(s)
- Chang-Ming Wang
- Department of Chemistry, National Taiwan University, Taipei, 10617, Taiwan
| | - Chong-You Chen
- Department of Chemistry, National Taiwan University, Taipei, 10617, Taiwan
| | - Wei-Ssu Liao
- Department of Chemistry, National Taiwan University, Taipei, 10617, Taiwan.
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23
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Murray LP, Mace CR. Usability as a guiding principle for the design of paper-based, point-of-care devices - A review. Anal Chim Acta 2020; 1140:236-249. [PMID: 33218486 DOI: 10.1016/j.aca.2020.09.063] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2020] [Revised: 09/28/2020] [Accepted: 09/30/2020] [Indexed: 12/14/2022]
Abstract
Due to their portability, versatility for supporting multiple assay formats, and potential for resulting in low-cost assays, paper-based analytical devices (PADs) are an increasingly popular format as a platform for the development of point-of-care tests. However, very few PADs have been translated successfully to their intended environments outside of academic settings. Often overlooked as a factor that inhibits translation, usability is a vital characteristic of any successful point-of-care test. Recent advancements in PAD design have demonstrated improved usability by simplifying various aspects of user operation, including sample collection, sample processing, device operation, detection, and readout/interpretation. Field testing at various stages of device design can offer critical feedback about device usability, especially when it involves the proposed end-user or other stakeholders. By highlighting advances in usability, we aim to encourage thoughtful and rigorous design at the academic prototyping stage to address one outstanding hurdle that limits the number of PADs that make it from the benchtop to the point-of-care.
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Affiliation(s)
- Lara P Murray
- Department of Chemistry, Tufts University, Medford, MA, 02155, USA
| | - Charles R Mace
- Department of Chemistry, Tufts University, Medford, MA, 02155, USA.
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24
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Jamal RB, Shipovskov S, Ferapontova EE. Electrochemical Immuno- and Aptamer-Based Assays for Bacteria: Pros and Cons over Traditional Detection Schemes. SENSORS (BASEL, SWITZERLAND) 2020; 20:E5561. [PMID: 32998409 PMCID: PMC7582323 DOI: 10.3390/s20195561] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Revised: 09/15/2020] [Accepted: 09/23/2020] [Indexed: 01/20/2023]
Abstract
Microbiological safety of the human environment and health needs advanced monitoring tools both for the specific detection of bacteria in complex biological matrices, often in the presence of excessive amounts of other bacterial species, and for bacteria quantification at a single cell level. Here, we discuss the existing electrochemical approaches for bacterial analysis that are based on the biospecific recognition of whole bacterial cells. Perspectives of such assays applications as emergency-use biosensors for quick analysis of trace levels of bacteria by minimally trained personnel are argued.
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Affiliation(s)
| | | | - Elena E. Ferapontova
- Interdisciplinary Nanoscience Center (iNANO), Aarhus University Gustav Wieds Vej 14, DK-8000 Aarhus, Denmark; (R.B.J.); (S.S.)
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25
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Lee WI, Park Y, Shrivastava S, Jung T, Meeseepong M, Lee J, Jeon B, Yang S, Lee NE. A fully integrated bacterial pathogen detection system based on count-on-a-cartridge platform for rapid, ultrasensitive, highly accurate and culture-free assay. Biosens Bioelectron 2020; 152:112007. [DOI: 10.1016/j.bios.2020.112007] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Revised: 01/02/2020] [Accepted: 01/04/2020] [Indexed: 12/13/2022]
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26
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Kaneko K, Hara M, Nishino T, Maruyama T. One-Step Biotinylation of Cellulose Paper by Polymer Coating to Prepare a Paper-Based Analytical Device. Anal Chem 2020; 92:1978-1987. [PMID: 31876140 DOI: 10.1021/acs.analchem.9b04373] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Cellulose paper has strong potential as an analytical platform owing to its unique characteristics. In the present study, we investigated a procedure for functionalizing the surface of cellulose paper by dip-coating a mixture of a functional polymer and a perfluoroalkylated surfactant (surfactant 1). The functional polymer comprised a mixture of methyl methacrylate and poly(ethylene glycol) methacrylate monomers. The monomer ratio in the functional polymer affected the hydrophilicity and water absorbance of the cellulose paper after dip-coating. Furthermore, the presence of surfactant 1 during dip-coating promoted the surface segregation of poly(ethylene glycol) (PEG) moieties in the polymer, which enhanced the hydrophilicity, prevented nonspecific protein adsorption, and maintained the water absorbance of the dip-coated cellulose paper. Dip-coating with another functional polymer containing biotin groups produced a cellulose paper with a biotin-decorated surface in a one-step procedure. The displayed biotin groups immobilized avidin on the surface, and the PEG moieties in the polymer prevented nonspecific protein adsorption. We then immobilized a thrombin-binding DNA aptamer on the avidin-immobilized cellulose paper to prepare a paper-based analytical device. It is possible to visualize thrombin in model solutions and serum using the paper-based analytical device.
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Affiliation(s)
- Kazuki Kaneko
- Department of Chemical Science and Engineering, Graduate School of Engineering , Kobe University , 1-1 Rokkodai, Nada-ku , Kobe 657-8501 , Japan
| | - Manami Hara
- Department of Chemical Science and Engineering, Graduate School of Engineering , Kobe University , 1-1 Rokkodai, Nada-ku , Kobe 657-8501 , Japan
| | - Takashi Nishino
- Department of Chemical Science and Engineering, Graduate School of Engineering , Kobe University , 1-1 Rokkodai, Nada-ku , Kobe 657-8501 , Japan
| | - Tatsuo Maruyama
- Department of Chemical Science and Engineering, Graduate School of Engineering , Kobe University , 1-1 Rokkodai, Nada-ku , Kobe 657-8501 , Japan
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27
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Kim HJ, Kwon C, Noh H. Paper-Based Diagnostic System Facilitating Escherichia coli Assessments by Duplex Coloration. ACS Sens 2019; 4:2435-2441. [PMID: 31409068 DOI: 10.1021/acssensors.9b01034] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Laboratory support for low-resource regions is a rising global issue. As microbiological contamination is closely associated with other issues like food safety, water supply sustainability, and public health, bacterial assessments in this setting need to be improved. Herein, we demonstrate a paper-based diagnostic device for point-of-need testing, in which fecal-indicating Escherichia coli and highly pathogenic E. coli are detected by duplex coloration. This device was functionalized by mixing different chromogenic substrates that reflect each bacterial enzymatic phenotype. In the final part of the paper, we describe this microbiological diagnostic system tested with bacteria-contaminated food samples. The device sensitivity was shown to have greatly reduced the total analysis time (below to 4 h) when combined with an enrichment amplification procedure. Notably, this paper device successfully detected 10 cfu/mL of target bacteria in a contaminated milk sample. Our diagnostic system shows acceptable accuracy, short analysis time, and a user-friendly interface, thereby eliminating demands for high-end equipment and a highly trained staff. We expect that this diagnostic system will be a sustainable solution in supporting microbiological or clinical laboratories in low-income countries.
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Affiliation(s)
| | - Chanho Kwon
- Research Institute, Biomax Co., Ltd., Seoul Technopark, 232 Gongneung-ro, Nowon-gu, Seoul 01811, Korea
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28
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Li S, Liu S, Xu Y, Zhang R, Zhao Y, Qu X, Wang Y, Huang J, Yu J. Robust and highly specific fluorescence sensing of Salmonella typhimurium based on dual-functional phi29 DNA polymerase-mediated isothermal circular strand displacement polymerization. Analyst 2019; 144:4795-4802. [DOI: 10.1039/c9an00843h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A simple and robust fluorescence sensing strategy has been developed for the detection of pathogenic bacteria by the combination of the dual functionality of phi29 DNA polymerase with isothermal circular strand displacement polymerization (ICSDP).
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Affiliation(s)
- Shasha Li
- College of Biological Sciences and Technology
- University of Jinan
- Jinan 250022
- P. R. China
| | - Su Liu
- School of Water Conservancy and Environment
- University of Jinan
- Jinan 250022
- P. R. China
| | - Yicheng Xu
- College of Biological Sciences and Technology
- University of Jinan
- Jinan 250022
- P. R. China
| | - Rufeng Zhang
- School of Water Conservancy and Environment
- University of Jinan
- Jinan 250022
- P. R. China
| | - Yihan Zhao
- College of Biological Sciences and Technology
- University of Jinan
- Jinan 250022
- P. R. China
| | - Xiaonan Qu
- School of Water Conservancy and Environment
- University of Jinan
- Jinan 250022
- P. R. China
| | - Yu Wang
- College of Biological Sciences and Technology
- University of Jinan
- Jinan 250022
- P. R. China
| | - Jiadong Huang
- College of Biological Sciences and Technology
- University of Jinan
- Jinan 250022
- P. R. China
- Key Laboratory of Chemical Sensing & Analysis in Universities of Shandong
| | - Jinghua Yu
- Key Laboratory of Chemical Sensing & Analysis in Universities of Shandong
- College of Chemistry and Chemical Engineering
- University of Jinan
- Jinan 250022
- P. R. China
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