The detailed acoustic signature of a micro-confined cavitation bubble

A capillary-induced negative pressure is able to initiate heterogeneous cavitation

A capillarity-induced negative pressure is of general importance for understanding the phase behaviors of liquids in small pores and cracks. A unique example is the embolism in the xylem of plants and the cavitation at the limiting negative pressure generated by evaporation of water from nanocapillaries in the cell walls of leaves. In this work, by combining the effect of a capillary and cavitation together, we demonstrate with molecular dynamics (MD) simulations that capillarity is able to induce spontaneous cavitation in the presence of hydrophobic heterogeneities. Our simulation results reveal separately how the capillary generates a negative pressure and how the generated negative pressure affects the onset of cavitation. We then interpret the cavitation mechanism and determine the occurrence of cavitation as a function of the hydrophobicity of the nucleating substrates where the cavitation initiates and as a function of the hydrophilicity of the capillary tube from which the negative pressure generates. Our results reveal that the capillary-induced cavitation can be described well with a heterogeneous nucleation mechanism, within the framework of classical nucleation theory.

Energetics of the microsporidian polar tube invasion machinery

Microsporidia are eukaryotic, obligate intracellular parasites that infect a wide range of hosts, leading to health and economic burdens worldwide. Microsporidia use an unusual invasion organelle called the polar tube (PT), which is ejected from a dormant spore at ultra-fast speeds, to infect host cells. The mechanics of PT ejection are impressive. Anncaliia algerae microsporidia spores (3-4 μm in size) shoot out a 100-nm-wide PT at a speed of 300 μm/s, creating a shear rate of 3000 s-1. The infectious cargo, which contains two nuclei, is shot through this narrow tube for a distance of ∼60-140 μm (Jaroenlak et al, 2020) and into the host cell. Considering the large hydraulic resistance in an extremely thin tube and the low-Reynolds-number nature of the process, it is not known how microsporidia can achieve this ultrafast event. In this study, we use Serial Block-Face Scanning Electron Microscopy to capture 3-dimensional snapshots of A. algerae spores in different states of the PT ejection process. Grounded in these data, we propose a theoretical framework starting with a systematic exploration of possible topological connectivity amongst organelles, and assess the energy requirements of the resulting models. We perform PT firing experiments in media of varying viscosity, and use the results to rank our proposed hypotheses based on their predicted energy requirement. We also present a possible mechanism for cargo translocation, and quantitatively compare our predictions to experimental observations. Our study provides a comprehensive biophysical analysis of the energy dissipation of microsporidian infection process and demonstrates the extreme limits of cellular hydraulics.

A nanoscale view of the origin of boiling and its dynamics

In this work, we present a dynamical theory of boiling based on fluctuating hydrodynamics and the diffuse interface approach. The model is able to describe boiling from the stochastic nucleation up to the macroscopic bubble dynamics. It covers, with a modest computational cost, the mesoscale area from nano to micrometers, where most of the controversial observations related to the phenomenon originate. In particular, the role of wettability in the macroscopic observables of boiling is elucidated. In addition, by comparing the ideal case of boiling on ultra-smooth surfaces with a chemically heterogeneous wall, our results will definitively shed light on the puzzling low onset temperatures measured in experiments. Sporadic nanometric spots of hydrophobic wettability will be shown to be enough to trigger the nucleation at low superheat, significantly reducing the temperature of boiling onset, in line with experimental results. The proposed mesoscale approach constitutes the missing link between macroscopic approaches and molecular dynamics simulations and will open a breakthrough pathway toward accurate understanding and prediction.

Energetics of the Microsporidian Polar Tube Invasion Machinery

Microsporidia are eukaryotic, obligate intracellular parasites that infect a wide range of hosts, leading to health and economic burdens worldwide. Microsporidia use an unusual invasion organelle called the polar tube (PT), which is ejected from a dormant spore at ultra-fast speeds, to infect host cells. The mechanics of PT ejection are impressive. Anncaliia algerae microsporidia spores (3-4 μm in size) shoot out a 100-nm-wide PT at a speed of 300 μm/sec, creating a shear rate of 3000 sec-1. The infectious cargo, which contains two nuclei, is shot through this narrow tube for a distance of ~60-140 μm (Jaroenlak et al., 2020) and into the host cell. Considering the large hydraulic resistance in an extremely thin tube and the low-Reynolds-number nature of the process, it is not known how microsporidia can achieve this ultrafast event. In this study, we use Serial Block-Face Scanning Electron Microscopy to capture 3-dimensional snapshots of A. algerae spores in different states of the PT ejection process. Grounded in these data, we propose a theoretical framework starting with a systematic exploration of possible topological connectivity amongst organelles, and assess the energy requirements of the resulting models. We perform PT firing experiments in media of varying viscosity, and use the results to rank our proposed hypotheses based on their predicted energy requirement. We also present a possible mechanism for cargo translocation, and quantitatively compare our predictions to experimental observations. Our study provides a comprehensive biophysical analysis of the energy dissipation of microsporidian infection process and demonstrates the extreme limits of cellular hydraulics.

The dynamics of cavitation bubbles in a sealed vessel

A model of cavitation bubbles is derived in liquid confined in an elastic sealed vessel driven by ultrasound. In this model, an assumption that the pressure acting on the sealed vessel due to bubble pulsations is proportional to total volume change of bubbles is made. Numerical simulations are carried out for a single bubble and for bubbles. The results show that the pulsation of a single bubble can be suppressed to a large extent in sealed vessel, and that of two matched bubbles with same ambient radius can be further suppressed. However, when two mismatched bubbles have the same ambient radii, an interesting breathing phenomenon takes place, where one bubble pulsates inversely with the other one. Due to this breathing phenomenon the suppression effect becomes weak, so the maximum radii of two mismatched bubbles can be larger than that of a single bubble or that of two matched bubbles in sealed vessel. Besides that, for two mismatched bubbles with different ambient radii, the small one in sealed vessel under some certain parameters can pulsate as strong as or even stronger than that of a single bubble in an open vessel.

Cavitation Mean Expectation Time in a Stretched Lennard-Jones Fluid under Confinement

We investigate the nucleation of cavitation bubbles in a confined Lennard-Jones fluid subjected to negative pressures in a cubic enclosure. We perform molecular dynamics (MD) simulations with tunable interatomic potentials that enable us to control the wettability of solid walls by the liquid, that is, its contact angle. For a given temperature and pressure, as the solid is taken more hydrophobic, we put in evidence, an increase in nucleation probability. A Voronoi tessellation method is used to accurately detect the bubble appearance and its nucleation rate as a function of the contact angle. We adapt classical nucleation theory (CNT) proposed for the heterogeneous case on a flat surface to our situation where bubbles may appear on flat walls, edges, or corners of the confined box. We finally calculate a theoretical mean expectation time in these three cases. The ratio of these calculated values over the homogeneous case is computed and compared successfully against MD simulations. Beyond the infinite liquid case, this work explores the heterogeneous nucleation of cavitation bubbles, not only in the flat surface case but for more complex confining geometries.

Analysis of pectin biopolymer phase states using acoustic emissions

Acoustic emissions are stress or elastic waves produced by a material under external load. Since acoustic emissions are generated from within and transmitted through the substance, the acoustic signature provides insights into the physical and mechanical properties of the material. In this report, we used a constant velocity probe with force and acoustic emission monitoring to investigate the properties of glass phase and gel phase pectin films. In the gel phase films, a constant velocity uniaxial load produced periodic premonitory acoustic emissions with coincident force variations (saw-tooth pattern). SEM images of the gel phase microarchitecture indicated the presence of slip planes. In contrast, the glass phase films demonstrated early acoustic emissions, but effectively no force or acoustic evidence of periodic or premonitory emissions. Microstructural imaging of the glass phase films indicated the presence of early microcracks as well as dense polymerization of the pectin (without evidence of slip planes). We conclude that the water content in the pectin films contributes to not only the physical properties of the films, but also the stick-slip motion observed with constant uniaxial load. Further, acoustic emissions provide a sensitive and practical measure of this mechanical behavior.