1
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Wang J, Niu K, Zhu H, Xu C, Deng C, Zhao W, Huang P, Lin H, Li D, Rosen J, Liu P, Allegretti F, Barth JV, Yang B, Björk J, Li Q, Chi L. Universal inter-molecular radical transfer reactions on metal surfaces. Nat Commun 2024; 15:3030. [PMID: 38589464 PMCID: PMC11001993 DOI: 10.1038/s41467-024-47252-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Accepted: 03/23/2024] [Indexed: 04/10/2024] Open
Abstract
On-surface synthesis provides tools to prepare low-dimensional supramolecular structures. Traditionally, reactive radicals are a class of single-electron species, serving as exceptional electron-withdrawing groups. On metal surfaces, however, such species are affected by conduction band screening effects that may even quench their unpaired electron characteristics. As a result, radicals are expected to be less active, and reactions catalyzed by surface-stabilized radicals are rarely reported. Herein, we describe a class of inter-molecular radical transfer reactions on metal surfaces. With the assistance of aryl halide precursors, the coupling of terminal alkynes is steered from non-dehydrogenated to dehydrogenated products, resulting in alkynyl-Ag-alkynyl bonds. Dehalogenated molecules are fully passivated by detached hydrogen atoms. The reaction mechanism is unraveled by various surface-sensitive technologies and density functional theory calculations. Moreover, we reveal the universality of this mechanism on metal surfaces. Our studies enrich the on-surface synthesis toolbox and develop a pathway for producing low-dimensional organic materials.
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Affiliation(s)
- Junbo Wang
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710119, China
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, Suzhou, 215123, China
| | - Kaifeng Niu
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, Suzhou, 215123, China
- Department of Physics, Chemistry and Biology, IFM, Linköping University, Linköping, 58183, Sweden
| | - Huaming Zhu
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710119, China
| | - Chaojie Xu
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, Suzhou, 215123, China
| | - Chuan Deng
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710119, China
| | - Wenchao Zhao
- Physics Department E20, Technical University of Munich, James-Franck-Str. 1, 85748, Garching, Germany
| | - Peipei Huang
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710119, China
| | - Haiping Lin
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710119, China
| | - Dengyuan Li
- Key Laboratory for Advanced Materials and Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, State Key Laboratory of Chemical Engineering, School of Chemistry and Molecular Engineering, East China University of Science & Technology, Shanghai, 200237, China
| | - Johanna Rosen
- Department of Physics, Chemistry and Biology, IFM, Linköping University, Linköping, 58183, Sweden
| | - Peinian Liu
- Key Laboratory for Advanced Materials and Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, State Key Laboratory of Chemical Engineering, School of Chemistry and Molecular Engineering, East China University of Science & Technology, Shanghai, 200237, China
| | - Francesco Allegretti
- Physics Department E20, Technical University of Munich, James-Franck-Str. 1, 85748, Garching, Germany
| | - Johannes V Barth
- Physics Department E20, Technical University of Munich, James-Franck-Str. 1, 85748, Garching, Germany
| | - Biao Yang
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, Suzhou, 215123, China.
- Physics Department E20, Technical University of Munich, James-Franck-Str. 1, 85748, Garching, Germany.
| | - Jonas Björk
- Department of Physics, Chemistry and Biology, IFM, Linköping University, Linköping, 58183, Sweden.
| | - Qing Li
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710119, China.
| | - Lifeng Chi
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, Suzhou, 215123, China.
- Department of Materials Science and Engineering, Macau University of Science and Technology, Macau, 999078, China.
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2
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Li X, Niu K, Duan S, Tang Y, Hao Z, Xu Z, Ge H, Rosen J, Björk J, Zhang H, Xu X, Chi L. Pyridinic Nitrogen Modification for Selective Acetylenic Homocoupling on Au(111). J Am Chem Soc 2023; 145:4545-4552. [PMID: 36794794 DOI: 10.1021/jacs.2c11799] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2023]
Abstract
On-surface acetylenic homocoupling has been proposed to construct carbon nanostructures featuring sp hybridization. However, the efficiency of linear acetylenic coupling is far from satisfactory, often resulting in undesired enyne products or cyclotrimerization products due to the lack of strategies to enhance chemical selectivity. Herein, we inspect the acetylenic homocoupling reaction of polarized terminal alkynes (TAs) on Au(111) with bond-resolved scanning probe microscopy. The replacement of benzene with pyridine moieties significantly prohibits the cyclotrimerization pathway and facilitates the linear coupling to produce well-aligned N-doped graphdiyne nanowires. Combined with density functional theory calculations, we reveal that the pyridinic nitrogen modification substantially differentiates the coupling motifs at the initial C-C coupling stage (head-to-head vs head-to-tail), which is decisive for the preference of linear coupling over cyclotrimerization.
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Affiliation(s)
- Xuechao Li
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Joint International Research Laboratory of Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China
| | - Kaifeng Niu
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Joint International Research Laboratory of Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China.,Department of Physics, Chemistry and Biology, IFM, Linköping University, Linköping 581 83, Sweden
| | - Sai Duan
- Collaborative Innovation Center of Chemistry for Energy Materials, Shanghai, Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Key Laboratory of Computational Physical Sciences, Shanghai Key Laboratory of Bioactive Small Molecules, Department of Chemistry, Fudan University, Shanghai 200433, China
| | - Yanning Tang
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Joint International Research Laboratory of Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China
| | - Zhengming Hao
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Joint International Research Laboratory of Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China
| | - Zhichao Xu
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Joint International Research Laboratory of Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China
| | - Haitao Ge
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Joint International Research Laboratory of Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China
| | - Johanna Rosen
- Department of Physics, Chemistry and Biology, IFM, Linköping University, Linköping 581 83, Sweden
| | - Jonas Björk
- Department of Physics, Chemistry and Biology, IFM, Linköping University, Linköping 581 83, Sweden
| | - Haiming Zhang
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Joint International Research Laboratory of Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China
| | - Xin Xu
- Collaborative Innovation Center of Chemistry for Energy Materials, Shanghai, Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Key Laboratory of Computational Physical Sciences, Shanghai Key Laboratory of Bioactive Small Molecules, Department of Chemistry, Fudan University, Shanghai 200433, China
| | - Lifeng Chi
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Joint International Research Laboratory of Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, China
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3
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Cheng S, Xue Z, Li C, Liu Y, Xiang L, Ke Y, Yan K, Wang S, Yu P. On-surface synthesis of triangulene trimers via dehydration reaction. Nat Commun 2022; 13:1705. [PMID: 35361812 PMCID: PMC8971457 DOI: 10.1038/s41467-022-29371-9] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2021] [Accepted: 03/04/2022] [Indexed: 11/08/2022] Open
Abstract
Triangulene and its homologues are of considerable interest for molecular spintronics due to their high-spin ground states as well as the potential for constructing high spin frameworks. Realizing triangulene-based high-spin system on surface is challenging but of particular importance for understanding π-electron magnetism. Here, we report two approaches to generate triangulene trimers on Au(111) by using surface-assisted dehydration and alkyne trimerization, respectively. We find that the developed dehydration reaction shows much higher chemoselectivity thus resulting in significant promotion of product yield compared to that using alkyne trimerization approach, through cutting the side reaction path. Combined with spin-polarized density functional theory calculations, scanning tunneling spectroscopy measurements identify the septuple (S = 3) high-spin ground state and quantify the collective ferromagnetic interaction among three triangulene units. Our results demonstrate the approaches to fabricate high-quality triangulene-based high spin systems and understand their magnetic interactions, which are essential for realizing carbon-based spintronic devices.
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Affiliation(s)
- Suqin Cheng
- School of Physical Science and Technology, ShanghaiTech University, 201210, Shanghai, China
| | - Zhijie Xue
- School of Physical Science and Technology, ShanghaiTech University, 201210, Shanghai, China
| | - Can Li
- Key Laboratory of Artificial Structures and Quantum Control (Ministry of Education), Shenyang National Laboratory for Materials Science, School of Physics and Astronomy, Shanghai Jiao Tong University, 200240, Shanghai, China
| | - Yufeng Liu
- Key Laboratory of Artificial Structures and Quantum Control (Ministry of Education), Shenyang National Laboratory for Materials Science, School of Physics and Astronomy, Shanghai Jiao Tong University, 200240, Shanghai, China
| | - Longjun Xiang
- School of Physical Science and Technology, ShanghaiTech University, 201210, Shanghai, China
| | - Youqi Ke
- School of Physical Science and Technology, ShanghaiTech University, 201210, Shanghai, China
| | - Kaking Yan
- School of Physical Science and Technology, ShanghaiTech University, 201210, Shanghai, China
| | - Shiyong Wang
- Key Laboratory of Artificial Structures and Quantum Control (Ministry of Education), Shenyang National Laboratory for Materials Science, School of Physics and Astronomy, Shanghai Jiao Tong University, 200240, Shanghai, China.
- Tsung-Dao Lee Institute, Shanghai Jiao Tong University, 200240, Shanghai, China.
| | - Ping Yu
- School of Physical Science and Technology, ShanghaiTech University, 201210, Shanghai, China.
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4
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Zhang C, Jaculbia RB, Tanaka Y, Kazuma E, Imada H, Hayazawa N, Muranaka A, Uchiyama M, Kim Y. Chemical Identification and Bond Control of π-Skeletons in a Coupling Reaction. J Am Chem Soc 2021; 143:9461-9467. [PMID: 34143618 DOI: 10.1021/jacs.1c02624] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Highly unsaturated π-rich carbon skeletons afford versatile tuning of structural and optoelectronic properties of low-dimensional carbon nanostructures. However, methods allowing more precise chemical identification and controllable integration of target sp-/sp2-carbon skeletons during synthesis are required. Here, using the coupling of terminal alkynes as a model system, we demonstrate a methodology to visualize and identify the generated π-skeletons at the single-chemical-bond level on the surface, thus enabling further precise bond control. The characteristic electronic features together with localized vibrational modes of the carbon skeletons are resolved in real space by a combination of scanning tunneling microscopy/spectroscopy (STM/STS) and tip-enhanced Raman spectroscopy (TERS). Our approach allows single-chemical-bond understanding of unsaturated carbon skeletons, which is crucial for generating low-dimensional carbon nanostructures and nanomaterials with atomic precision.
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Affiliation(s)
- Chi Zhang
- Surface and Interface Science Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Rafael B Jaculbia
- Surface and Interface Science Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Yusuke Tanaka
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.,Advanced Elements Chemistry Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Emiko Kazuma
- Surface and Interface Science Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Hiroshi Imada
- Surface and Interface Science Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Norihiko Hayazawa
- Surface and Interface Science Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Atsuya Muranaka
- Advanced Elements Chemistry Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Masanobu Uchiyama
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.,Advanced Elements Chemistry Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Yousoo Kim
- Surface and Interface Science Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
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5
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Mohammed MSG, Lawrence J, García F, Brandimarte P, Berdonces-Layunta A, Pérez D, Sánchez-Portal D, Peña D, de Oteyza DG. From starphenes to non-benzenoid linear conjugated polymers by substrate templating. NANOSCALE ADVANCES 2021; 3:2351-2358. [PMID: 36133758 PMCID: PMC9419161 DOI: 10.1039/d1na00126d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Accepted: 03/06/2021] [Indexed: 06/14/2023]
Abstract
Combining on-surface synthetic methods with the power of scanning tunneling microscopy to characterize novel materials at the single molecule level, we show how to steer the reactivity of one anthracene-based precursor towards different product nanostructures. Whereas using a Au(111) surface with three-fold symmetry results in the dominant formation of a starphene derivative, the two-fold symmetry of a reconstructed Au(110) surface allows the selective growth of non-benzenoid linear conjugated polymers. We further assess the electronic properties of each of the observed product structures via tunneling spectroscopy and DFT calculations, altogether advancing the synthesis and characterization of molecular structures of notable scientific interest that have been only scarcely investigated to date, as applies both to starphenes and to non-benzenoid conjugated polymers.
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Affiliation(s)
- Mohammed S G Mohammed
- Donostia International Physics Center (DIPC) San Sebastián Spain
- Centro de Física de Materiales (CSIC-UPV/EHU) San Sebastián Spain
| | - James Lawrence
- Donostia International Physics Center (DIPC) San Sebastián Spain
- Centro de Física de Materiales (CSIC-UPV/EHU) San Sebastián Spain
| | - Fátima García
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela Santiago de Compostela Spain
| | | | - Alejandro Berdonces-Layunta
- Donostia International Physics Center (DIPC) San Sebastián Spain
- Centro de Física de Materiales (CSIC-UPV/EHU) San Sebastián Spain
| | - Dolores Pérez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela Santiago de Compostela Spain
| | - Daniel Sánchez-Portal
- Donostia International Physics Center (DIPC) San Sebastián Spain
- Centro de Física de Materiales (CSIC-UPV/EHU) San Sebastián Spain
| | - Diego Peña
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela Santiago de Compostela Spain
| | - Dimas G de Oteyza
- Donostia International Physics Center (DIPC) San Sebastián Spain
- Centro de Física de Materiales (CSIC-UPV/EHU) San Sebastián Spain
- Ikerbasque, Basque Foundation for Science Bilbao Spain
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6
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Lawrence J, Mohammed MSG, Rey D, Aguilar-Galindo F, Berdonces-Layunta A, Peña D, de Oteyza DG. Reassessing Alkyne Coupling Reactions While Studying the Electronic Properties of Diverse Pyrene Linkages at Surfaces. ACS NANO 2021; 15:4937-4946. [PMID: 33630588 PMCID: PMC7992190 DOI: 10.1021/acsnano.0c09756] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
The combination of alkyne and halogen functional groups in the same molecule allows for the possibility of many different reactions when utilized in on-surface synthesis. Here, we use a pyrene-based precursor with both functionalities to examine the preferential reaction pathway when it is heated on an Au(111) surface. Using high-resolution bond-resolving scanning tunneling microscopy, we identify multiple stable intermediates along the prevailing reaction pathway that initiate with a clearly dominant Glaser coupling, together with a multitude of other side products. Importantly, control experiments with reactants lacking the halogen functionalization reveal the Glaser coupling to be absent and instead show the prevalence of non-dehydrogenative head-to-head alkyne coupling. We perform scanning tunneling spectroscopy on a rich variety of the product structures obtained in these experiments, providing key insights into the strong dependence of their HOMO-LUMO gaps on the nature of the intramolecular coupling. A clear trend is found of a decreasing gap that is correlated with the conversion of triple bonds to double bonds via hydrogenation and to higher levels of cyclization, particularly with nonbenzenoid product structures. We rationalize each of the studied cases.
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Affiliation(s)
- James Lawrence
- Donostia
International Physics Center, 20018 San Sebastián, Spain
- Centro
de Física de Materiales, 20018 San Sebastián, Spain
- (J.L.)
| | - Mohammed S. G. Mohammed
- Donostia
International Physics Center, 20018 San Sebastián, Spain
- Centro
de Física de Materiales, 20018 San Sebastián, Spain
| | - Dulce Rey
- Centro
Singular de Investigación en Química Biolóxica
e Materiais Moleculares (CiQUS) and Departamento de Química
Orgánica, Universidade de Santiago
de Compostela, 15782 Santiago de Compostela, Spain
| | | | - Alejandro Berdonces-Layunta
- Donostia
International Physics Center, 20018 San Sebastián, Spain
- Centro
de Física de Materiales, 20018 San Sebastián, Spain
| | - Diego Peña
- Centro
Singular de Investigación en Química Biolóxica
e Materiais Moleculares (CiQUS) and Departamento de Química
Orgánica, Universidade de Santiago
de Compostela, 15782 Santiago de Compostela, Spain
- (D.P.)
| | - Dimas G. de Oteyza
- Donostia
International Physics Center, 20018 San Sebastián, Spain
- Centro
de Física de Materiales, 20018 San Sebastián, Spain
- Ikerbasque,
Basque Foundation for Science, 48011 Bilbao, Spain
- (D.G.d.O.)
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7
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Albrecht F, Rey D, Fatayer S, Schulz F, Pérez D, Peña D, Gross L. Intramolecular Coupling of Terminal Alkynes by Atom Manipulation. Angew Chem Int Ed Engl 2020; 59:22989-22993. [PMID: 32845044 PMCID: PMC7756451 DOI: 10.1002/anie.202009200] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Revised: 08/11/2020] [Indexed: 12/13/2022]
Abstract
Glaser-like coupling of terminal alkynes by thermal activation is extensively used in on-surface chemistry. Here we demonstrate an intramolecular version of this reaction performed by atom manipulation. We used voltage pulses from the tip to trigger a Glaser-like coupling between terminal alkyne carbons within a custom-synthesized precursor molecule adsorbed on bilayer NaCl on Cu(111). Different conformations of the precursor molecule and the product were characterized by molecular structure elucidation with atomic force microscopy and orbital density mapping with scanning tunneling microscopy, accompanied by density functional theory calculations. We revealed partially dehydrogenated intermediates, providing insight into the reaction pathway.
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Affiliation(s)
| | - Dulce Rey
- Centro de Investigación en Química Biolóxica e Materiais, Moleculares (CiQUS) and Departamento de Química OrgánicaUniversidade de Santiago de Compostela15782Santiagode CompostelaSpain
| | | | | | - Dolores Pérez
- Centro de Investigación en Química Biolóxica e Materiais, Moleculares (CiQUS) and Departamento de Química OrgánicaUniversidade de Santiago de Compostela15782Santiagode CompostelaSpain
| | - Diego Peña
- Centro de Investigación en Química Biolóxica e Materiais, Moleculares (CiQUS) and Departamento de Química OrgánicaUniversidade de Santiago de Compostela15782Santiagode CompostelaSpain
| | - Leo Gross
- IBM Research–Zurich8803RüschlikonSwitzerland
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