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Gould A, Schalk DR, Fleagle ME, Wheeler KA. Benzoyl Valine Quasiracemates: Pairing CF 3 Quasienantiomers with H to t-Butyl. CRYSTAL GROWTH & DESIGN 2024; 24:3967-3976. [PMID: 38708368 PMCID: PMC11066836 DOI: 10.1021/acs.cgd.4c00307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 04/04/2024] [Accepted: 04/08/2024] [Indexed: 05/07/2024]
Abstract
Understanding the interplay of structural features responsible for molecular assembly is essential for molecular crystal engineering. When assembling molecules with encoded motifs, first choice supramolecular strategies almost always include robust directional nonbonded contacts. Quasiracemic materials, considered near racemates since cocrystallization occurs with chemically unique components, lack a molecular framework or functional group restrictions, highlighting the importance of molecular shape to molecular assembly. Recently, our group reported quasiracemates derived from benzoyl leucine/phenylalanine derivatives with two points of chemical difference. In this study, we modified the chemical framework with valine and increased the scope of the work by imposing a larger variance in the side chain substituents. Pairing a CF3 component with quasienantiomers that differ iteratively from hydrogen to t-butyl offers an important view into the supramolecular landscape of these materials. Single-crystal X-ray crystallography and lattice energy assessments, coupled with conformational and crystal structure similarity searches, show an elevated degree of isomorphism for many of the targeted 17 racemates and quasiracemates. These benzoyl amino acid molecular architectures create extended hydrogen-bond patterns in the crystal that provide enhanced opportunities to study the shape space and molecular recognition profiles for a diverse family of quasienantiomeric components.
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Affiliation(s)
- Ashah
M. Gould
- Department of Chemistry, Whitworth University, 300 West Hawthorne Road, Spokane, Washington 99251, United States
| | - Danielle R. Schalk
- Department of Chemistry, Whitworth University, 300 West Hawthorne Road, Spokane, Washington 99251, United States
| | - Molly E. Fleagle
- Department of Chemistry, Whitworth University, 300 West Hawthorne Road, Spokane, Washington 99251, United States
| | - Kraig A. Wheeler
- Department of Chemistry, Whitworth University, 300 West Hawthorne Road, Spokane, Washington 99251, United States
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Shin BR, Puc U, Park YJ, Kim DJ, Lee CW, Yoon W, Yun H, Kim C, Rotermund F, Jazbinsek M, Kwon OP. Design of High-Performance Organic Nonlinear Optical and Terahertz Crystals by Controlling the van der Waals Volume. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2023; 10:e2304767. [PMID: 37867211 DOI: 10.1002/advs.202304767] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2023] [Revised: 08/23/2023] [Indexed: 10/24/2023]
Abstract
In the development of new organic crystals for nonlinear optical and terahertz (THz) applications, it is very challenging to achieve the essentially required non-centrosymmetric molecular arrangement. Moreover, the resulting crystal structure is mostly unpredictable due to highly dipolar molecular components with complex functional substituents. In this work, new organic salt crystals with top-level macroscopic optical nonlinearity by controlling the van der Waals volume (VvdW ), rather than by trial and error, are logically designed. When the VvdW of molecular ionic components varies, the corresponding crystal symmetry shows an observable trend: change from centrosymmetric to non-centrosymmetric and back to centrosymmetric. All non-centrosymmetric crystals exhibit an isomorphic P1 crystal structure with an excellent macroscopic second-order nonlinear optical response. Apart from the top-level macroscopic optical nonlinearity, new organic crystals introducing highly electronegative fluorinated substituents with strong secondary bonding ability show excellent performance in efficient and broadband THz wave generation, high crystal density, high thermal stability, and good bulk crystal growth ability.
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Affiliation(s)
- Bong-Rim Shin
- Department of Molecular Science and Technology, Ajou University, Suwon, 16499, South Korea
| | - Uros Puc
- Institute of Computational Physics, Zurich University of Applied Sciences (ZHAW), Winterthur, 8401, Switzerland
| | - Yu-Jin Park
- Department of Molecular Science and Technology, Ajou University, Suwon, 16499, South Korea
| | - Dong-Joo Kim
- Department of Molecular Science and Technology, Ajou University, Suwon, 16499, South Korea
| | - Chae-Won Lee
- Department of Molecular Science and Technology, Ajou University, Suwon, 16499, South Korea
| | - Woojin Yoon
- Research Institute of Basic Sciences, Department of Chemistry, Department of Energy Systems Research, Ajou University, Suwon, 16499, South Korea
| | - Hoseop Yun
- Research Institute of Basic Sciences, Department of Chemistry, Department of Energy Systems Research, Ajou University, Suwon, 16499, South Korea
| | - Chaeyoon Kim
- Department of Physics, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, 34141, South Korea
| | - Fabian Rotermund
- Department of Physics, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, 34141, South Korea
| | - Mojca Jazbinsek
- Institute of Computational Physics, Zurich University of Applied Sciences (ZHAW), Winterthur, 8401, Switzerland
| | - O-Pil Kwon
- Department of Molecular Science and Technology, Ajou University, Suwon, 16499, South Korea
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Brock CP. Pervasive approximate periodic symmetry in organic P1 structures. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2022; 78:576-588. [PMID: 35975824 DOI: 10.1107/s2052520622004929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2022] [Accepted: 05/07/2022] [Indexed: 06/15/2023]
Abstract
The goal of this project was to identify the prevalence of approximate symmetry in organic P1 structures. In the November 2019 version of the Cambridge Structural Database (CSD), there are 2592 organic, P1, R ≤ 0.050 structures; complete, unique entries are available for 1407 Z = Z' > 1 and 1049 Z = Z' = 1 structures. All the Z > 1 structures can have approximate symmetry; the Z = 1 structures were scanned to find those composed of molecules or ions that might lie on a special position and those that have two or more large molecules or ions that are very similar. The number of Z = 1 structures so identified was 285, of which 49 were grouped with the Z > 1 structures because Zeffective > 1. The packing in each of the 1407 + 285 = 1692 structures was investigated. The 144 that should almost certainly have been described in a smaller or higher-symmetry unit cell were removed from the list; 120 of the 144 are composed of achiral or racemic material. (About half of the Z = 1 and 89% of the Z > 1 structures are composed of enantiopure material.) Approximate periodic symmetry was found in 86% of the 1337 remaining Z > 1 structures and in 72% of the 211 remaining Z = 1 structures. About a third of the enantiomerically pure structures mimic inversion symmetry; 38% have approximate rotational symmetry. For the structures of achiral and racemic material, distorted glide or mirror symmetry is more common than is distorted inversion symmetry. Approximate rotational and glide symmetry was found to be periodic in two dimensions considerably more often than in three. In 4% of the structures, different layer types alternate or layers are related by approximate local rotations, as well as by small translations. In 5% of the structures, different parts of the molecule are segregated into two-dimensional regions that have different approximate symmetries. More than a third of the structures that are a distorted version of a higher-symmetry structure were determined at T ≥ 288 K.
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Affiliation(s)
- Carolyn Pratt Brock
- Department of Chemistry, University of Kentucky, Lexington, KY 40506-0055, USA
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Hussain J, Sahrawat P, Dubey P, Kirubakaran S, Thiruvenkatam V. Exploring packing features of N-substituted acridone derivatives: Synthesis and X-ray crystallography studies. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131448] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Mattison A, Brown JM, Carmichael D, Alcock NW. Are stable atropisomers possible for meta-meta’ linked biphenols. Tetrahedron 2021. [DOI: 10.1016/j.tet.2021.132114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Wells RG, Sahlstrom KD, Ekelem FI, Wheeler KA. Amino acid hydrogen oxalate quasiracemates – hydrocarbon side chains. CrystEngComm 2021. [DOI: 10.1039/d1ce01213d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Amino acid hydrogen oxalate quasiracemates form robust crystal structure motifs that are assessed for conformational similarity and degree of inversion symmetry.
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Affiliation(s)
- Russell G. Wells
- Department of Chemistry, Whitworth University, 300 West Hawthorne Road, Spokane, Washington, 99251, USA
| | - Katriel D. Sahlstrom
- Department of Chemistry, Whitworth University, 300 West Hawthorne Road, Spokane, Washington, 99251, USA
| | - Franklin I. Ekelem
- Department of Chemistry, Whitworth University, 300 West Hawthorne Road, Spokane, Washington, 99251, USA
| | - Kraig A. Wheeler
- Department of Chemistry, Whitworth University, 300 West Hawthorne Road, Spokane, Washington, 99251, USA
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