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Vásquez-Espinal A, Pino-Rios R. Planar tetracoordinate beryllium compounds with a partially covalent Be-Ng bond. Phys Chem Chem Phys 2024; 26:16687-16692. [PMID: 38809129 DOI: 10.1039/d4cp00468j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/30/2024]
Abstract
An analysis of the thermodynamic and kinetic stability and the nature of the chemical bond in hypercoordinated compounds with the formula BeH3Ng+ (Ng = He-Rn) through high-level calculations is presented in this work. Thermochemical calculations show that, for the heavier noble gases (Ar-Rn), these systems are thermodynamically stable at room temperature; however, this stability decreases due to a weakening of the Be-H2 interaction, while the Be-Ng bond strengthens going down the periodic table. These results are complemented by Born Oppenheimer molecular dynamics simulations, in which the increasing tendency to dissociate the Be-H2 bond is evidenced. The nature of the chemical bonding depends on the analysis performed. On the one hand, the interacting quantum atoms method indicates that the covalent contribution is around 25 to 30%. On the other hand, the electron density topology indicates a covalent nature for compounds with Kr-Rn, while Hirshfeld population analysis in conjunction with Mayer's bond order establishes polar covalent behavior. The geometrical parameters and natural energy decomposition analysis (NEDA) indicate a covalent nature, allowing us to consider that the Be-Ng bond has a partially covalent character.
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Affiliation(s)
- Alejandro Vásquez-Espinal
- Química y Farmacia, Facultad de Ciencias de la Salud, Universidad Arturo Prat, Casilla 121, Iquique 1100000, Chile.
| | - Ricardo Pino-Rios
- Química y Farmacia, Facultad de Ciencias de la Salud, Universidad Arturo Prat, Casilla 121, Iquique 1100000, Chile.
- Centro de Investigación Medicina de Altura - CEIMA, Universidad Arturo Prat, Casilla 121, Iquique 1100000, Chile
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2
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Cong F, Cai L, Cheng J, Pu Z, Wang X. Beryllium Dimer Reactions with Acetonitrile: Formation of Strong Be-Be Bonds. Molecules 2023; 29:177. [PMID: 38202759 PMCID: PMC10779904 DOI: 10.3390/molecules29010177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2023] [Revised: 12/25/2023] [Accepted: 12/26/2023] [Indexed: 01/12/2024] Open
Abstract
Laser ablated Be atoms have been reacted with acetonitrile molecules in 4 K solid neon matrix. The diberyllium products BeBeNCCH3 and CNBeBeCH3 have been identified by D and 13C isotopic substitutions and quantum chemical calculations. The stabilization of the diberyllium species is rationalized from the formation of the real Be-Be single bonds with bond distances as 2.077 and 2.058 Å and binding energies as -27.1 and -77.2 kcal/mol calculated at CCSD (T)/aug-cc-pVTZ level of theory for BeBeNCCH3 and CNBeBeCH3, respectively. EDA-NOCV analysis described the interaction between Be2 and NC···CH3 fragments as Lewis "acid-base" interactions. In the complexes, the Be2 moiety carries positive charges which transfer from antibonding orbital of Be2 to the bonding fragments significantly strengthen the Be-Be bonds that are corroborated by AIM, LOL and NBO analyses. In addition, mono beryllium products BeNCCH3, CNBeCH3, HBeCH2CN and HBeNCCH2 have also been observed in our experiments.
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Affiliation(s)
- Fei Cong
- Shanghai Key Lab of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200092, China; (F.C.); (L.C.); (J.C.)
| | - Liyan Cai
- Shanghai Key Lab of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200092, China; (F.C.); (L.C.); (J.C.)
| | - Juanjuan Cheng
- Shanghai Key Lab of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200092, China; (F.C.); (L.C.); (J.C.)
| | - Zhen Pu
- China Academy of Engineering and Physics, Mianyang 621900, China
| | - Xuefeng Wang
- Shanghai Key Lab of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200092, China; (F.C.); (L.C.); (J.C.)
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3
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Guha AK. Identification of Global Minimum of HNBeCO Complex. J Phys Chem A 2023; 127:9743-9747. [PMID: 37938901 DOI: 10.1021/acs.jpca.3c05289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2023]
Abstract
Multiple bonding has always excited chemists. Recently, triple bonding between beryllium and N atoms in the HNBeCO complex has been reported based on experimental infrared spectroscopy and theoretical calculations. However, the present work reports a different structure based on a detailed potential energy surface scan. The global minimum geometry features only a weak partial Be-N double bond. The global minimum geometry lies very deep in the potential energy surface with respect to the reported one. Isomerization kinetics reveals that the reported structure has to overcome a very small barrier (5.4 kcal/mol) to isomerize to the global one. Although the previously reported structure is a real minimum, the present study identifies a much lower energy structure. A re-examination of the experimental spectra might show that the global minimum has also been observed.
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Affiliation(s)
- Ankur K Guha
- Advanced Computational Chemistry Centre, Department of Chemistry, Cotton University, Panbazar, Guwahati, Assam 781001, India
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Kuntar SP, Ghosh A, Ghanty TK. Prediction of donor-acceptor-type novel noble gas complexes in the triplet electronic state. Phys Chem Chem Phys 2023; 25:6987-6994. [PMID: 36807359 DOI: 10.1039/d2cp05813h] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Closed-shell noble gas (Ng) compounds in the singlet electronic state have been extensively studied in the past two decades after the revolutionary discovery of 1HArF molecule. Motivated by the experimental identification of very strong donor-acceptor-type singlet-state Ng complex 1ArOH+, in the present article, for the first time, we report new donor-acceptor-type noble gas complexes in the triplet electronic state (3NgBeN+ (Ng = He-Rn)), where most of the Ng-Be bond lengths are smaller than the corresponding covalent limits. The newly proposed complexes are predicted to be stable by various computational tools, including coupled-cluster and multireference-based methods, with strong Ng-Be bonding (40.4-196.2 kJ mol-1). We have also investigated 3NgBeP+ (Ng = He-Rn) complexes for the purpose of comparison. Various computational results, including the structural parameters, bonding energies, vibrational frequencies, and atoms-in-molecule properties suggest that it may be possible to prepare and characterize these triplet state complexes through suitable experimental technique(s).
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Affiliation(s)
- Subrahmanya Prasad Kuntar
- Homi Bhabha National Institute, Training School complex, Anushaktinagar, Mumbai 400094, India.,Bio-Science Group, Bhabha Atomic Research Centre, Mumbai 400085, India.
| | - Ayan Ghosh
- Homi Bhabha National Institute, Training School complex, Anushaktinagar, Mumbai 400094, India.,Laser and Plasma Technology Division, Beam Technology Development Group, Bhabha Atomic Research Centre, Mumbai 400085, India
| | - Tapan K Ghanty
- Homi Bhabha National Institute, Training School complex, Anushaktinagar, Mumbai 400094, India.,Bio-Science Group, Bhabha Atomic Research Centre, Mumbai 400085, India.
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5
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Yun GR, Li HX, Cabellos JL, Tiznado W, Cui ZH, Pan S. Hitting the Bull's Eye: Stable HeBeOH + Complex. Chemphyschem 2022; 23:e202200587. [PMID: 36029196 DOI: 10.1002/cphc.202200587] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Revised: 08/26/2022] [Indexed: 01/05/2023]
Abstract
It is now known that the heavier noble gases (Ng=Ar-Rn) show some varying degrees of reactivity with a gradual increase in reactivity along Ar-Rn. However, because of their very small size and very high ionization potential, helium and neon are the hardest targets to crack. Although few neon complexes are isolated at very low temperatures, helium needs very extreme situations like very high pressure. Here, we find that protonated BeO, BeOH+ can bind helium and neon spontaneously at room temperature. Therefore, extreme conditions like very low temperature and/or high pressure will not be required for their experimental isolation. The Ng-Be bond strength is very high for their heavier homologs and the bond strength shows a gradual increase from He to Rn. Moreover, the Ng-Be attractive energy is almost exclusively originated from the orbital interaction which is composed of one Ng(s/pσ )→BeOH+ σ-donation and two weaker Ng(pπ )→BeOH+ π-donations, except for helium. Helium uses its low-lying vacant 2p orbitals to accept π-electron density from BeOH+ . Previously, such electron-accepting ability of helium was used to explain a somewhat stronger helium bond than neon for neutral complexes. However, the present results indicate that such π-back donations are too weak in nature to decide any energetic trend between helium and neon.
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Affiliation(s)
- Gai-Ru Yun
- Institute of Atomic and Molecular Physics, Jilin University, 130023, Changchun, China
| | - Hai-Xia Li
- Institute of Atomic and Molecular Physics, Jilin University, 130023, Changchun, China
| | - Jose Luis Cabellos
- Universidad Politécnica de Tapachula, Carretera Tapachula a Puerto Madero km 24+300, San Benito, Puerto Madero, C.P. 30830, Tapachula, Chiapas, Mexico
| | - William Tiznado
- Computational and Theoretical Chemistry Group, Departamento de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello, República 498, Santiago, postCode/>8370251, Chile
| | - Zhong-Hua Cui
- Institute of Atomic and Molecular Physics, Jilin University, 130023, Changchun, China.,Key Laboratory of Physics and Technology for Advanced Batteries (Ministry of Education), Jilin University, 130023, Changchun, China
| | - Sudip Pan
- Institute of Atomic and Molecular Physics, Jilin University, 130023, Changchun, China.,Fachbereich Chemie, Philipps-Universitt Marbur, Hans-Meerwein-Straße, 35043, Marburg, Germany
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Ghoshal S, Ghosh A, Roy P, Ball B, Pramanik A, Sarkar P. Recent Progress in Computational Design of Single-Atom/Cluster Catalysts for Electrochemical and Solar-Driven N 2 Fixation. ACS Catal 2022. [DOI: 10.1021/acscatal.2c04527] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Sourav Ghoshal
- Department of Chemistry, Visva-Bharati University, Santiniketan731 235, India
| | - Atish Ghosh
- Department of Chemistry, Visva-Bharati University, Santiniketan731 235, India
| | - Prodyut Roy
- Department of Chemistry, Visva-Bharati University, Santiniketan731 235, India
| | - Biswajit Ball
- Department of Chemistry, Visva-Bharati University, Santiniketan731 235, India
| | - Anup Pramanik
- Department of Chemistry, Sidho-Kanho-Birsha University, Purulia723 104, India
| | - Pranab Sarkar
- Department of Chemistry, Visva-Bharati University, Santiniketan731 235, India
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Dong X, Liu Y, Liu X, Pan S, Cui Z, Merino G. Be
4
B
12
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: A Covalently Bonded Archimedean Beryllo‐Borospherene. Angew Chem Int Ed Engl 2022; 61:e202208152. [DOI: 10.1002/anie.202208152] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2022] [Indexed: 11/06/2022]
Affiliation(s)
- Xue Dong
- Institute of Atomic and Molecular Physics Jilin University Changchun 130023 China
| | - Yu‐qian Liu
- Institute of Atomic and Molecular Physics Jilin University Changchun 130023 China
| | - Xin‐bo Liu
- Institute of Atomic and Molecular Physics Jilin University Changchun 130023 China
| | - Sudip Pan
- Fachbereich Chemie, Philipps-Universitt Marburg Hans-Meerwein-Straße 35043 Marburg Germany
| | - Zhong‐hua Cui
- Institute of Atomic and Molecular Physics Jilin University Changchun 130023 China
- Key Laboratory of Physics and Technology for Advanced Batteries (Ministry of Education) Jilin University Changchun 130023 China
| | - Gabriel Merino
- Departamento de Física Aplicada Centro de Investigación y de Estudios Avanzados Unidad Mérida km 6 Antigua carretera a Progreso, Apdo. Postal 73, Cordemex 97310 Mérida, Yuc México
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Dong X, Liu YQ, Liu XB, Pan S, Cui ZH, Merino G. Be4B12+: A Covalently Bonded Archimedean Beryllo‐Borospherene. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202208152] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Xue Dong
- Jilin University Institute of Atomic and Molecular Physics CHINA
| | - Yu-qian Liu
- Jilin University Institute of Atomic and Molecular Physics CHINA
| | - Xin-bo Liu
- Jilin University Institute of Atomic and Molecular Physics CHINA
| | - Sudip Pan
- University of Marburg: Philipps-Universitat Marburg Fachbereich Chemie Descending Number of Current Assignments GERMANY
| | - Zhong-hua Cui
- Jilin University Institute of Atomic and Molecular Physics CHINA
| | - Gabriel Merino
- Centro de Investigacion y de Estudios Avanzados del Instituto Politecnico Nacional Fisica Aplicada Km. 6 Antigua carretera a Progreso Apdo. Postal 73, Cordemex 97310 Merida MEXICO
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Wang L, Pan S, Wang G, Zeng X, Zhou M, Frenking G. Triple bonding between beryllium and nitrogen in HNBeCO. Chem Commun (Camb) 2022; 58:8532-8535. [PMID: 35802125 DOI: 10.1039/d2cc02969c] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The HNBeCO complex is generated via the reaction of a beryllium atom with a HNCO molecule in a solid neon matrix, which is identified via infrared absorption spectroscopy with isotopic substitutions. The complex is characterized to have a linear structure with a very short Be-N bond distance. Bonding analyses indicate that the complex involves an unprecedented HNBeCO triple bond consisting of two degenerate electron-sharing π bonds and a dative σ bond with the π bonds being much stronger than the σ bond.
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Affiliation(s)
- Lina Wang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysts and Innovative Materials, Fudan University, Shanghai, 200438, China.
| | - Sudip Pan
- Fachbereich Chemie, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, D-35043, Marburg, Germany.
| | - Guanjun Wang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysts and Innovative Materials, Fudan University, Shanghai, 200438, China.
| | - Xiaoqing Zeng
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysts and Innovative Materials, Fudan University, Shanghai, 200438, China.
| | - Mingfei Zhou
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysts and Innovative Materials, Fudan University, Shanghai, 200438, China.
| | - Gernot Frenking
- Fachbereich Chemie, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, D-35043, Marburg, Germany. .,Institute of Advanced Synthesis, School of Chemistry and Molecular Engineering, Nanjing Tech University, Nanjing, 211816, China.,Donostia International Physics Center (DIPC), P.K. 1072, 20080 Donostia, Euskadi, Spain
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Davis JU, Phung QM, Yanai T, Ehara M, Sommerfeld T. Lifetimes of Be32– and Mg32– Cluster Dianions. J Phys Chem A 2021; 125:3579-3588. [DOI: 10.1021/acs.jpca.1c00770] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Jeremy U. Davis
- Department of Chemistry and Physics, Southeastern Louisiana University, SLU 10878, Hammond, Louisiana 70402, United States
| | - Quan Manh Phung
- Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
- Institute of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Nagoya, Aichi 464-8602, Japan
| | - Takeshi Yanai
- Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya, Aichi 464-8602, Japan
- Institute of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Nagoya, Aichi 464-8602, Japan
- Japan Science and Technology Agency, PRESTO, Kawaguchi, Saitama 332-0012, Japan
| | - Masahiro Ehara
- Institute for Molecular Science and Research Center for Computational Science, Okazaki 444-8585, Japan
- Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, Kyoto 615-8520, Japan
| | - Thomas Sommerfeld
- Department of Chemistry and Physics, Southeastern Louisiana University, SLU 10878, Hammond, Louisiana 70402, United States
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