Construction of a combined enzyme system of graphene oxide and manganese peroxidase for efficient oxidation of aromatic compounds

The liquid by-product of biogas production: characterisation and impact on soil fungi

ABSTRACTA liquid digestate (LD) obtained from the anaerobic digestion of mixed organic waste was characterised and tested on the fungi Pleurotus eryngii, Irpex lacteus and Trametes versicolor. Aqueous mixtures of LD at doses of 0.5, 1 and 2% (v/v) were tested directly or after interaction with 5% (w/v) biochar (BC-LD) and/or 100 mg L-1 soil humic acid (HA-BC-LD and HA-LD). Total luminescence (TL) analysis of LD showed the presence of fluorophores typical of scarcely aromatic matter, while the Fourier transform infrared (FTIR) spectrum evidenced absorption bands typical of labile and non-condensed material. Some spectroscopic variations of the LD sample were observed after its interaction with the other materials. All LD treatments markedly promoted hyphal extension of P. eryngii whose growth rate increased up to 38% at the highest LD dose. The LD alone had no influence on the other fungi, whose growth was stimulated by some combinations of LD with the other materials. In facts, the growth rate of I. lacteus increased in BC-LD 1 and BC-LD 2 (P ≤ 0.05) and in all treatments with HA (up to 6% in HA-LD 2, P ≤ 0.01), while the growth of T. versicolor was promoted by HA-BC-LD 2 treatment (P ≤ 0.05) and slightly inhibited by all BC-LD combinations (up to 7% by BC-LD 1, P ≤ 0.05). The overall results obtained encourage the addition of LD to the soil and suggest a possible use of this material as substrate ingredient for the cultivation of edible mushrooms such as P. eryngii.

Recent Progress on Peroxidase Modification and Application

Peroxdiase is one of the member of oxireductase super family, which has a broad substrate range and a variety of reaction types, including hydroxylation, epoxidation or halogenation of unactivated C-H bonds, and aromatic group or biophenol compounds. Here, we summarized the recently discovered enzymes with peroxidation activity, and focused on the special structures, sites, and corresponding strategies that can change the peroxidase catalytic activity, stability, and substrate range. The comparison of the structural differences between these natural enzymes and the mimic enzymes of binding nanomaterials and polymer materials is helpful to expand the application of peroxidase in industry. In addition, we also reviewed the catalytic application of peroxidase in the synthesis of important organic molecules and the degradation of pollutants.

Exploring the cellulolytic and hemicellulolytic activities of manganese peroxidase for lignocellulose deconstruction

BACKGROUND

A cost-effective pretreatment and saccharification process is a necessary prerequisite for utilizing lignocellulosic biomass (LCB) in biofuel and biomaterials production. Utilizing a multifunctional enzyme with both pretreatment and saccharification functions in a single step for simultaneous biological pretreatment and saccharification process (SPS) will be a green method of low cost and high efficiency. Manganese peroxidase (MnP, EC 1.11.1.13), a well-known lignin-degrading peroxidase, is generally preferred for the biological pretreatment of biomass. However, exploring the role and performance of MnP in LCB conversion will promote the application of MnP for lignocellulose-based biorefineries.

RESULTS

In this study, we explored the ability of an MnP from Moniliophthora roreri, MrMnP, in LCB degradation. With Mn2+ and H2O2, MrMnP decomposed 5.0 g/L carboxymethyl cellulose to 0.14 mM of reducing sugar with a conversion yield of 5.0 mg/g, including 40 μM cellobiose, 70 μM cellotriose, 20 μM cellotetraose, and 10 μM cellohexaose, and degraded 1.0 g/L mannohexaose to 0.33 μM mannose, 4.08 μM mannotriose, and 4.35 μM mannopentaose. Meanwhile, MrMnP decomposed 5.0 g/L lichenan to 0.85 mM of reducing sugar with a conversion yield of 30.6 mg/g, including 10 μM cellotriose, 20 μM cellotetraose, and 80 μM cellohexose independently of Mn2+ and H2O2. Moreover, the versatility of MrMnP in LCB deconstruction was further verified by decomposing locust bean gum and wheat bran into reducing sugars with a conversion yield of 54.4 mg/g and 29.5 mg/g, respectively, including oligosaccharides such as di- and tri-saccharides. The catalytic mechanism underlying MrMnP degraded lignocellulose was proposed as that with H2O2, MrMnP oxidizes Mn2+ to Mn3+. Subsequently, it forms a complex with malonate, facilitating the degradation of CMC and mannohexaose into reducing sugars. Without H2O2, MrMnP directly oxidizes malonate to hydroperoxyl acetic acid radical to form compound I, which then attacks the glucosidic bond of lichenan.

CONCLUSION

This study identified a new function of MrMnP in the hydrolysis of cellulose and hemicellulose, suggesting that MrMnP exhibits its versatility in the pretreatment and saccharification of LCB. The results will lead to an in-depth understanding of biocatalytic saccharification and contribute to forming new enzymatic systems for using lignocellulose resources to produce sustainable and economically viable products and the long-term development of biorefinery, thereby increasing the productivity of LCB as a green resource.

An Up-to-Date Review on the Remediation of Dyes and Phenolic Compounds from Wastewaters Using Enzymes Immobilized on Emerging and Nanostructured Materials: Promises and Challenges

Addressing the critical issue of water pollution, this review article emphasizes the need to remove hazardous dyes and phenolic compounds from wastewater. These pollutants pose severe risks due to their toxic, mutagenic, and carcinogenic properties. The study explores various techniques for the remediation of organic contaminants from wastewater, including an enzymatic approach. A significant challenge in enzymatic wastewater treatment is the loss of enzyme activity and difficulty in recovery post-treatment. To mitigate these issues, this review examines the strategy of immobilizing enzymes on newly developed nanostructured materials like graphene, carbon nanotubes (CNTs), and metal-organic frameworks (MOFs). These materials offer high surface areas, excellent porosity, and ample anchoring sites for effective enzyme immobilization. The review evaluates recent research on enzyme immobilization on these supports and their applications in biocatalytic nanoparticles. It also analyzes the impact of operational factors (e.g., time, pH, and temperature) on dye and phenolic compound removal from wastewater using these enzymes. Despite promising outcomes, this review acknowledges the challenges for large-scale implementation and offers recommendations for future research to tackle these obstacles. This review concludes by suggesting that enzyme immobilization on these emerging materials could present a sustainable, environmentally friendly solution to the escalating water pollution crisis.

A mutant R70V/E166A of short manganese peroxidase showing Mn2+-independent dye decolorization

Il-MnP1, a short-type manganese peroxidase from Irpex lacteus F17, can oxidize some substrates in the absence of Mn²⁺, but the catalysis was much lower than in the presence of Mn²⁺. Here, we report a mutant R70V/E166A of Il-MnP1 with some unique properties, which possessed clearly higher catalysis for the decolorization of anthraquinone and azo dyes in the absence of Mn²⁺ than that of Il-MnP1. Importantly, the optimum pH of R70V/E166A for decolorization of anthraquinone dyes (Reactive Blue 19, RB19) was 6.5, and the mutant achieved high decolorization activities in the range of pH 4.0-7.0, whereas Il-MnP1 only showed decolorization for RB19 at pH 3.5-4.0. In addition, the optimum H₂O₂ concentration of R70V/E166A for RB19 decolorization was eight times that of Il-MnP1 and the H₂O₂ stability has improved 1.4 times compared with Il-MnP1. Furthermore, Mn²⁺ competitively inhibited the oxidation of RB19 by R70V/E166A, explaining the higher catalytic activity of the mutant R70V/E166A in the absence of Mn²⁺. Molecular docking results suggested that RB19 binds to the distal side of the heme plane in mutant R70V/E166A, which extended from the heme δ-side to the heme γ-side, and close to the mutated residues of R70V and E166A, whereas RB19 could not access the heme pocket of Il-MnP1 due to the steric hindrance of the side-chain group of Arg 70. Thus, this study constructed a useful mutant R70V/E166A and analyzed its higher Mn²⁺-independent activity, which is very important for better understanding the Mn²⁺-independent catalytic mechanism for short manganese peroxidases. KEY POINTS: • The mutant R70V/E166A of atypical MnP1 of I. lacteus F17 shows unique catalytic properties. • At pH 6.5, the R70V/E166A had a strong ability to decolorize anthraquinone dyes in the absence of Mn²⁺. • The binding sites of Reactive Blue 19 in mutant R70V/E166A were elucidated.

Non-magnetic and magnetically responsive support materials immobilized peroxidases for biocatalytic degradation of emerging dye pollutants-A review

In recent years, the removal of hazardous pollutants from many industries has become a significant challenge for mankind as a growing number of contaminants, including a wide range of organic pollutants, synthetic dyes, and polycyclic aromatic hydrocarbons (PAHs), have inevitably led to an increased anthropogenic impact on the biosphere. Due to the complex aromatic structure, most synthetic dyes show resistance to degrade by the classical approaches, such as coagulation, flotation, adsorption, membrane process, and reverse osmosis. Enzyme-assisted biodegradation of pollutants offers an eco-friendlier and cost-effective alternative to remediate dyes, dyes-based effluents, other toxins, etc. Various plant and microbial oxidoreductase (Horseradish and manganese peroxidase) have recently received more attention for degrading and detoxifying a wide range of dyes either by opening the aromatic ring structure or by precipitation due to their high activity under milder conditions, high substrate specificity, and biodegradable nature. To enhance the efficiency, stability and recyclability, enzymes were immobilized on various support media such as sodium alginate, agarose, chitin/chitosan, polyvinyl alcohol, polyacrylamide, macroporous exchange resins, hydrophobic sol-gels, and nanoporous silica gel, including magnetically separatable media. Among various types of magnetic nanoparticles (MNPs), iron oxide magnetic nanoparticles, such as hematite, magnetite, and maghemite, have gained great attention due to their properties like small size, superparamagnetism, high surface area to volume ratio, and ease of separation for repeated cycles of uses. These carriers can be separated easily and rapidly from the reaction medium by an external magnetic field without being subjected to mechanical stress than centrifugation or filtration. Various methods have been employed for immobilizing oxidoreductase on different media, such as adsorption, covalent binding, entrapment, and encapsulation using different cross-linking agents. Compared to the free enzyme, insolubilized enzymes reduce production costs by enzyme reusability, tolerance to unfavorable environmental conditions, and high catalytic stability. Here, we review various immobilization methods and biocatalytic degradation of emerging dye pollutants, focusing on various non-magnetically and magnetically responsive supports to immobilize peroxidases. Conclusively, magnetically separatable peroxidases show more stability towards extreme temperature and pH conditions and can be used for repeated cycles than free and non-magnetically separatable peroxidase.

Modelling and Environmental Profile Associated with the Valorization of Wheat Straw as Carbon Source in the Biotechnological Production of Manganese Peroxidase

Interest in the development of biorefineries and biotechnological processes based on renewable resources has multiplied in recent years. This driving force is the result of the availability of lignocellulosic biomass and the range of applications that arise from its use and valorization. The approach of second-generation sugars from lignocellulosic biomass opens up the possibility of producing biotechnological products such as enzymes as a feasible alternative in the framework of biorefineries. It is in this context that this manuscript is framed, focusing on the modelling of a large-scale fermentative biotechnological process to produce the enzyme manganese peroxidase (MnP) by the fungus Irpex lacteus using wheat straw as a carbon source. The production scheme is based on the sequence of four stages: pretreatment of wheat straw, seed fermenters, enzyme production and downstream processes. For its environmental assessment, the Life Cycle Assessment methodology, which allows the identification and quantification of environmental impacts associated with the process, was utilized. As the main finding, the stages of the process with the highest environmental burdens are those of pretreatment and fermentation, mainly due to energy requirements. With the aim of proposing improvement scenarios, sensitivity analyses were developed around the identified hotspots. An improvement in the efficiency of steam consumption leads to a reduction of environmental damage of up to 30%.

Hierarchically porous magnetic Fe3O4/Fe-MOF used as an effective platform for enzyme immobilization: a kinetic and thermodynamic study of structure–activity

Fe₃O₄/Fe-MOF integrate magnetic characteristics and hierarchical porous structure for supporting chloroperoxidase (CPO) or horseradish peroxidase (HRP).