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Bao P, Phillips K, Raval R. Membrane Proteins in Action Monitored by pH-Responsive Liquid Crystal Biosensors. ACS APPLIED MATERIALS & INTERFACES 2024; 16:31843-31850. [PMID: 38841859 PMCID: PMC11194810 DOI: 10.1021/acsami.4c06614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2024] [Revised: 05/30/2024] [Accepted: 05/31/2024] [Indexed: 06/07/2024]
Abstract
Liquid crystal (LC) biosensors have received significant attention for their potential applications for point-of-care devices due to their sensitivity, low cost, and easy read-out. They have been employed to detect a wide range of important biological molecules. However, detecting the function of membrane proteins has been extremely challenging due to the difficulty of integrating membrane proteins, lipid membranes, and LCs into one system. In this study, we addressed this challenge by monitoring the proton-pumping function of bacteriorhodopsin (bR) using a pH-sensitive LC thin film biosensor. To achieve this, we deposited purple membranes (PMs) containing a 2D crystal form of bRs onto an LC-aqueous interface. Under light, the PM patches changed the local pH at the LC-aqueous interface, causing a color change in the LC thin film that is observable through a polarizing microscope with crossed polarizers. These findings open up new opportunities to study the biofunctions of membrane proteins and their induced local environmental changes in a solution using LC biosensors.
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Affiliation(s)
- Peng Bao
- Open Innovation
Hub for Antimicrobial
Surfaces, Surface Science Research Centre, Department of Chemistry, University of Liverpool, Liverpool L69 3BX, U.K.
| | - Kyle Phillips
- Open Innovation
Hub for Antimicrobial
Surfaces, Surface Science Research Centre, Department of Chemistry, University of Liverpool, Liverpool L69 3BX, U.K.
| | - Rasmita Raval
- Open Innovation
Hub for Antimicrobial
Surfaces, Surface Science Research Centre, Department of Chemistry, University of Liverpool, Liverpool L69 3BX, U.K.
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2
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Zizzari A, Arima V. Glass Microdroplet Generator for Lipid-Based Double Emulsion Production. MICROMACHINES 2024; 15:500. [PMID: 38675311 PMCID: PMC11052113 DOI: 10.3390/mi15040500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Revised: 03/27/2024] [Accepted: 04/01/2024] [Indexed: 04/28/2024]
Abstract
Microfluidics offers a highly controlled and reproducible route to synthesize lipid vesicles. In recent years, several microfluidic approaches have been introduced for this purpose, but double emulsions, such as Water-in-Oil-in-Water (W/O/W) droplets, are preferable to produce giant vesicles that are able to maximize material encapsulation. Flow focusing (FF) is a technique used to generate double emulsion droplets with high monodispersity, a controllable size, and good robustness. Many researchers use polydimethylsiloxane as a substrate material to fabricate microdroplet generators, but it has some limitations due to its hydrophobicity, incompatibility with organic solvents, and the molecular adsorption on the microchannel walls. Thus, specific surface modification and functionalization steps, which are uncomfortable to perform in closed microchannels, are required to overcome these shortcomings. Here, we propose glass as a material to produce a chip with a six-inlet junction geometry. The peculiar geometry and the glass physicochemical properties allow for W/O/W droplet formation without introducing microchannel wall functionalization and using a variety of reagents and organic solvents. The robust glass chip can be easily cleaned and used repeatedly, bringing advantages in terms of cost and reproducibility in emulsion preparation.
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Affiliation(s)
- Alessandra Zizzari
- CNR NANOTEC-Institute of Nanotechnology c/o Campus Ecotekne, via Monteroni, 73100 Lecce, Italy;
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Waeterschoot J, Gosselé W, Alizadeh Zeinabad H, Lammertyn J, Koos E, Casadevall I Solvas X. Formation of Giant Unilamellar Vesicles Assisted by Fluorinated Nanoparticles. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2023; 10:e2302461. [PMID: 37807811 DOI: 10.1002/advs.202302461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2023] [Revised: 07/31/2023] [Indexed: 10/10/2023]
Abstract
In the quest to produce artificial cells, one key challenge that remains to be solved is the recreation of a complex cellular membrane. Among the existing models, giant unilamellar vesicles (GUVs) are particularly interesting due to their intrinsic compartmentalisation ability and their resemblance in size and shape to eukaryotic cells. Many techniques have been developed to produce GUVs all having inherent advantages and disadvantages. Here, the authors show that fluorinated silica nanoparticles (FNPs) used to form Pickering emulsions in a fluorinated oil can destabilise lipid nanosystems to template the formation of GUVs. This technique enables GUV production across a broad spectrum of buffer conditions, while preventing the leakage of the encapsulated components into the oil phase. Furthermore, a simple centrifugation process is sufficient for the release of the emulsion-trapped GUVs, bypassing the need to use emulsion-destabilising chemicals. With fluorescent FNPs and transmission electron microscopy, the authors confirm that FNPs are efficiently removed, producing contaminant-free GUVs. Further experiments assessing the lateral diffusion of lipids and unilamellarity of the GUVs demonstrate that they are comparable to GUVs produced via electroformation. Finally, the ability of incorporating transmembrane proteins is demonstrated, highlighting the potential of this method for the production of GUVs for artificial cell applications.
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Affiliation(s)
- Jorik Waeterschoot
- Mechatronics, Biostatistics and Sensors (MeBioS) at KU Leuven, Willem de Croylaan 42, 3001, Leuven, Belgium
| | - Willemien Gosselé
- Mechatronics, Biostatistics and Sensors (MeBioS) at KU Leuven, Willem de Croylaan 42, 3001, Leuven, Belgium
| | - Hojjat Alizadeh Zeinabad
- Mechatronics, Biostatistics and Sensors (MeBioS) at KU Leuven, Willem de Croylaan 42, 3001, Leuven, Belgium
| | - Jeroen Lammertyn
- Mechatronics, Biostatistics and Sensors (MeBioS) at KU Leuven, Willem de Croylaan 42, 3001, Leuven, Belgium
| | - Erin Koos
- Soft Matter, Rheology and Technology (SMaRT) at KU Leuven, Celestijnenlaan 200J, 3000, Leuven, Belgium
| | - Xavier Casadevall I Solvas
- Mechatronics, Biostatistics and Sensors (MeBioS) at KU Leuven, Willem de Croylaan 42, 3001, Leuven, Belgium
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Marín-Aguilar S, Camerin F, van der Ham S, Feasson A, Vutukuri HR, Dijkstra M. A colloidal viewpoint on the sausage catastrophe and the finite sphere packing problem. Nat Commun 2023; 14:7896. [PMID: 38036561 PMCID: PMC10689752 DOI: 10.1038/s41467-023-43722-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Accepted: 11/16/2023] [Indexed: 12/02/2023] Open
Abstract
It is commonly believed that the most efficient way to pack a finite number of equal-sized spheres is by arranging them tightly in a cluster. However, mathematicians have conjectured that a linear arrangement may actually result in the densest packing. Here, our combined experimental and simulation study provides a physical realization of the finite sphere packing problem by studying arrangements of colloids in a flaccid lipid vesicle. We map out a state diagram displaying linear, planar, and cluster conformations of spheres, as well as bistable states which alternate between cluster-plate and plate-linear conformations due to membrane fluctuations. Finally, by systematically analyzing truncated polyhedral packings, we identify clusters of 56 ≤ N ≤ 70 number of spheres, excluding N = 57 and 63, that pack more efficiently than linear arrangements.
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Affiliation(s)
- Susana Marín-Aguilar
- Soft Condensed Matter & Biophysics, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 1, Utrecht, 3584 CC, Utrecht, The Netherlands.
| | - Fabrizio Camerin
- Soft Condensed Matter & Biophysics, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 1, Utrecht, 3584 CC, Utrecht, The Netherlands.
- International Institute for Sustainability with Knotted Chiral Meta Matter (WPI-SKCM²), Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, 739-8526, Hiroshima, Japan.
| | - Stijn van der Ham
- Active Soft Matter and Bio-inspired Materials Lab, Faculty of Science and Technology, MESA+ Institute, University of Twente, 7500 AE, Enschede, The Netherlands
| | - Andréa Feasson
- Active Soft Matter and Bio-inspired Materials Lab, Faculty of Science and Technology, MESA+ Institute, University of Twente, 7500 AE, Enschede, The Netherlands
| | - Hanumantha Rao Vutukuri
- Active Soft Matter and Bio-inspired Materials Lab, Faculty of Science and Technology, MESA+ Institute, University of Twente, 7500 AE, Enschede, The Netherlands.
| | - Marjolein Dijkstra
- Soft Condensed Matter & Biophysics, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 1, Utrecht, 3584 CC, Utrecht, The Netherlands.
- International Institute for Sustainability with Knotted Chiral Meta Matter (WPI-SKCM²), Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, 739-8526, Hiroshima, Japan.
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Guo JK, Gao Y, Ling J, Yuan Y, Wang X, Song JK. Laser processing of microdroplet structure of liquid crystal in 3D. OPTICS EXPRESS 2022; 30:26018-26026. [PMID: 36236800 DOI: 10.1364/oe.459332] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Accepted: 06/25/2022] [Indexed: 06/16/2023]
Abstract
Processing of mesoscale structures of soft matter and liquid is of great importance in both science and engineering. In this work, we introduce the concept of laser-assisted micromachining to this field and inject a certain number of microdroplets into a preselected location on the surface of a liquid crystal drop through laser irradiation. The impact of laser energy on the triggered injection is discussed. The sequentially injected microdroplets are spontaneously captured by the defect ring in the host drop and transported along this defect track as micro-cargos. By precisely manipulating the laser beam, the tailored injection of droplets is achieved, and the injected droplets self-assemble into one necklace ring within the host drop. The result provides a bottom-up approach for the in-situ and three-dimensional microfabrication of droplet structure of soft matter using a laser beam, which may be applicable in the development of optical and photonic devices.
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Chien PJ, Shih YL, Cheng CT, Tu HL. Chip assisted formation of phase-separated liposomes for reconstituting spatial protein-lipid interactions. LAB ON A CHIP 2022; 22:2540-2548. [PMID: 35667105 DOI: 10.1039/d2lc00089j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Spatially organized molecular interactions are fundamental features underlying many biochemical processes in cells. These spatially defined reactions are essential to ensure high signaling specificity and are indispensable for maintaining cell functions. The construction of synthetic cell models that can resemble such properties is thus important yet less investigated. In this study, we present a reliable method for the rapid production of highly uniform phase-separated liposomes as synthetic cell models. Specifically, a microfluidics-based strategy coupled with custom reagents for generating size-tunable liposomes with various lipid compositions is presented. In addition, an important cell signaling interacting pair, the pleckstrin homology (PH) domain and PIP2 lipid, is used to demonstrate the controlled molecular assembly inside these liposomes. The result shows that PIP2 on phase-separated domains successfully recruits the PH domains to realize spatially defined molecular interactions. Such a system is versatile and can be expanded to synthesize other proteins for realizing multiplexed molecular interactions in the same liposome. Phase-separated lipid domains can also be used to recruit targeted proteins to initiate localized reactions, thus paving the way for organizing a complex signaling cascade in the synthetic cell.
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Affiliation(s)
- Po-Jen Chien
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan.
| | - Yi-Lun Shih
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan.
- Department of Chemical Engineering, National Taiwan University of Science and Technology, Taipei 10607, Taiwan
| | - Chieh-Teng Cheng
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan.
- Genome and Systems Biology Degree Program, Academia Sinica and National Taiwan University, Taiwan
| | - Hsiung-Lin Tu
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan.
- Genome and Systems Biology Degree Program, Academia Sinica and National Taiwan University, Taiwan
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Spherical Confinement of Chromonics: Effects of a Chiral Aminoacid. NANOMATERIALS 2022; 12:nano12040619. [PMID: 35214948 PMCID: PMC8878752 DOI: 10.3390/nano12040619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Revised: 01/31/2022] [Accepted: 02/08/2022] [Indexed: 11/17/2022]
Abstract
Induced or spontaneous chirality in natural systems is an intriguing issue. In recent years, a lot of attention has been focused on chirality of chromonic liquid crystals, a class of materials that is able to self-assemble in columnar structures. However, the mechanism involved in the arising of chirality in these materials, that starts at the molecular level and controls the supramolecular structure, is poorly understood; however, it is certainly affected by ionic strength. In this work we present the results obtained doping Cromolyn, a chromonic material, with a strong helical-twisting-power peptide, and confining it in a spherical geometry. We demonstrate, by means of optical polarized microscopy and structural analysis, that both the geometrical constraint and the presence of the chiral dopant enhance the chiral effect; we also demonstrate that they favor the rise of a highly ordered helical superstructure, that may be optimized upon adding an ionic dye to the system. Finally, we report a procedure for the preparation of free-standing polymeric films, embedding and preserving the microspheres, and paving the way for the creation of biocompatible and eco-friendly optical devices to be used in the sensor and anticounterfeiting fields.
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Design and Manufacture of a Low-Cost Microfluidic System for the Synthesis of Giant Liposomes for the Encapsulation of Yeast Homologues: Applications in the Screening of Membrane-Active Peptide Libraries. MICROMACHINES 2021; 12:mi12111377. [PMID: 34832789 PMCID: PMC8619280 DOI: 10.3390/mi12111377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Revised: 11/02/2021] [Accepted: 11/06/2021] [Indexed: 11/24/2022]
Abstract
The discovery of new membrane-active peptides (MAPs) is an area of considerable interest in modern biotechnology considering their ample applicability in several fields ranging from the development of novel delivery vehicles (via cell-penetrating peptides) to responding to the latent threat of antibiotic resistance (via antimicrobial peptides). Different strategies have been devised for such discovery process, however, most of them involve costly, tedious, and low-efficiency methods. We have recently proposed an alternative route based on constructing a non-rationally designed library recombinantly expressed on the yeasts’ surfaces. However, a major challenge is to conduct a robust and high-throughput screening of possible candidates with membrane activity. Here, we addressed this issue by putting forward low-cost microfluidic platforms for both the synthesis of Giant Unilamellar Vesicles (GUVs) as mimicking entities of cell membranes and for providing intimate contact between GUVs and homologues of yeasts expressing MAPs. The homologues were chitosan microparticles functionalized with the membrane translocating peptide Buforin II, while intimate contact was through passive micromixers with different channel geometries. Both microfluidic platforms were evaluated both in silico (via Multiphysics simulations) and in vitro with a high agreement between the two approaches. Large and stable GUVs (5–100 µm) were synthesized effectively, and the mixing processes were comprehensively studied leading to finding the best operating parameters. A serpentine micromixer equipped with circular features showed the highest average encapsulation efficiencies, which was explained by the unique mixing patterns achieved within the device. The microfluidic devices developed here demonstrate high potential as platforms for the discovery of novel MAPs as well as for other applications in the biomedical field such as the encapsulation and controlled delivery of bioactive compounds.
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Jani P, Nayani K, Abbott NL. Sculpting the shapes of giant unilamellar vesicles using isotropic-nematic-isotropic phase cycles. SOFT MATTER 2021; 17:9078-9086. [PMID: 34558596 DOI: 10.1039/d1sm00910a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Understanding how soft matter deforms in response to mechanical interactions is central to the design of functional synthetic materials as well as elucidation of the behaviors of biological assemblies. Here we explore how cycles of thermally induced transitions between nematic (N) and isotropic (I) phases can be used to exert cyclical elastic stresses on dispersions of giant unilamellar vesicles (GUVs) and thereby evolve GUV shape and properties. The measurements were enabled by the finding that I-N-I phase transitions of the lyotropic chromonic liquid crystal disodium cromoglycate, when conducted via an intermediate columnar (M) phase, minimized transport of GUVs on phase fronts to confining surfaces. Whereas I to N phase transitions strained spherical GUVs into spindle-like shapes, with an efflux of GUV internal volume, subsequent N to I transitions generated a range of complex GUV shapes, including stomatocyte, pear- and dumbbell-like shapes that depended on the extent of strain in the N phase. The highest strained GUVs were observed to form buds (daughter vesicles) that we show, via a cycle of I-N-I-N phase transitions, are connected via a neck to the parent vesicle. Additional experiments established that changes in elasticity of the phase surrounding the GUVs and not thermal expansion of membranes were responsible for the shape transitions, and that I-N-I transformations that generate stomatocytes can be understood from the Bilayer-Coupling model of GUV shapes. Overall, these observations advance our understanding of how LC elastic stresses can be regulated to evolve the shapes of soft biological assemblies as well as provide new approaches for engineering synthetic soft matter.
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Affiliation(s)
- Purvil Jani
- School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, USA.
| | - Karthik Nayani
- Department of Chemical Engineering, University of Arkansas, Fayetteville, AR, USA
| | - Nicholas L Abbott
- School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, USA.
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Al Nahas K, Keyser UF. Standardizing characterization of membrane active peptides with microfluidics. BIOMICROFLUIDICS 2021; 15:041301. [PMID: 34257793 PMCID: PMC8266397 DOI: 10.1063/5.0048906] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Accepted: 06/22/2021] [Indexed: 06/13/2023]
Abstract
Antimicrobial peptides (AMPs) are emerging as important players in the fight against antibiotic resistance. In parallel, the field of microfluidics has matured and its benefits are being exploited in applications of biomimetics and standardized testing. Membrane models are essential tools extensively utilized in studying the activity and modes of action of AMPs. Here, we describe how the utilization of microfluidic platforms in characterizing membrane active peptides can develop a reliable colorful image that classical techniques have rendered black and white.
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Affiliation(s)
- Kareem Al Nahas
- Cavendish Laboratory, University of Cambridge, J.J. Thomson Avenue, Cambridge CB30HE, United Kingdom
| | - Ulrich F. Keyser
- Cavendish Laboratory, University of Cambridge, J.J. Thomson Avenue, Cambridge CB30HE, United Kingdom
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Torbensen K, Baroud CN, Ristori S, Abou-Hassan A. Tip Streaming of a Lipid-Stabilized Double Emulsion Generated in a Microfluidic Channel. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2021; 37:7442-7448. [PMID: 34110835 DOI: 10.1021/acs.langmuir.1c00827] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Water/oil/water (w/o/w) double emulsions (DEs) are multicompartment structures which can be used in many technological applications and in fundamental studies as models of cell like microreactors or templates for other materials. Herein, we study the flow dynamics of water/oil/water double emulsions generated in a microfluidic device and stabilized with the phospholipid 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC). We show that by varying the concentration of lipids in the oil phase (chloroform) or by modulating the viscosity of the aqueous continuous phase, the double emulsions under flow exhibit a rich dynamic behavior. An initial deformation of the double emulsions is followed by tube extraction at the rear end, relative to the flow direction, resulting in pinch off at the tube extremity by which small aqueous compartments are released. These compartments are phospholipid vesicles as deduced from fluorescence experiments. The overall process can thus be of help to shed light on the mechanical aspects of phenomena such as the budding and fusion in cell membranes.
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Affiliation(s)
- Kristian Torbensen
- Sorbonne Université, CNRS UMR 8234, Laboratoire PHysico-chimie des Électrolytes et Nanosystèmes InterfaciauX, PHENIX, F-75005 Paris, France
| | - Charles N Baroud
- Physical Microfluidics & Bioengineering, Institut Pasteur, 25 Rue du Dr. Roux, 75015 Paris, France
| | - Sandra Ristori
- Chemistry Department & CSGI, University of Florence, via Della Lastruccia 3, 50019 Sesto Fioretino, Italy
| | - Ali Abou-Hassan
- Sorbonne Université, CNRS UMR 8234, Laboratoire PHysico-chimie des Électrolytes et Nanosystèmes InterfaciauX, PHENIX, F-75005 Paris, France
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