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For: Wee WA, Yum JH, Hirashima S, Sugiyama H, Park S. Synthesis and application of a 19F-labeled fluorescent nucleoside as a dual-mode probe for i-motif DNAs. RSC Chem Biol 2021;2:876-882. [PMID: 34458815 PMCID: PMC8382138 DOI: 10.1039/d1cb00020a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2021] [Accepted: 03/04/2021] [Indexed: 11/21/2022]  Open
Number Cited by Other Article(s)
1
Ghosh P, Betz K, Gutfreund C, Pal A, Marx A, Srivatsan SG. Structures of a DNA Polymerase Caught while Incorporating Responsive Dual-Functional Nucleotide Probes. Angew Chem Int Ed Engl 2024:e202414319. [PMID: 39428682 DOI: 10.1002/anie.202414319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2024] [Revised: 10/17/2024] [Accepted: 10/18/2024] [Indexed: 10/22/2024]
2
Eichler C, Himmelstoß M, Plangger R, Weber LI, Hartl M, Kreutz C, Micura R. Advances in RNA Labeling with Trifluoromethyl Groups. Chemistry 2023;29:e202302220. [PMID: 37534701 PMCID: PMC10947337 DOI: 10.1002/chem.202302220] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 07/31/2023] [Accepted: 08/03/2023] [Indexed: 08/04/2023]
3
Karimi A, Wang K, Basran K, Copp W, Luedtke NW. A Bright and Ionizable Cytosine Mimic for i-Motif Structures. Bioconjug Chem 2023. [PMID: 37196003 DOI: 10.1021/acs.bioconjchem.3c00055] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
4
Kumagai T, Kinoshita B, Hirashima S, Sugiyama H, Park S. Thiophene-Extended Fluorescent Nucleosides as Molecular Rotor-Type Fluorogenic Sensors for Biomolecular Interactions. ACS Sens 2023;8:923-932. [PMID: 36740828 DOI: 10.1021/acssensors.2c02617] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
5
Khatik SY, Srivatsan SG. Environment-Sensitive Nucleoside Probe Unravels the Complex Structural Dynamics of i-Motif DNAs. Bioconjug Chem 2022;33:1515-1526. [PMID: 35819865 DOI: 10.1021/acs.bioconjchem.2c00237] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
6
Hirashima S, Sugiyama H, Park S. Characterization of 2-Fluoro-2'-deoxyadenosine in Duplex, G-quadruplex and I-motif. Chembiochem 2022;23:e202200222. [PMID: 35438834 DOI: 10.1002/cbic.202200222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Indexed: 11/12/2022]
7
Manna S, Sontakke VA, Srivatsan SG. Incorporation and Utility of a Responsive Ribonucleoside Analogue in Probing the Conformation of a Viral RNA Motif by Fluorescence and 19 F NMR Spectroscopy. Chembiochem 2021;23:e202100601. [PMID: 34821449 DOI: 10.1002/cbic.202100601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Revised: 11/24/2021] [Indexed: 11/09/2022]
8
Matyašovský J, Tack L, Palágyi A, Kuba M, Pohl R, Kraus T, Güixens-Gallardo P, Hocek M. Nucleotides bearing aminophenyl- or aminonaphthyl-3-methoxychromone solvatochromic fluorophores for the enzymatic construction of DNA probes for the detection of protein-DNA binding. Org Biomol Chem 2021;19:9966-9974. [PMID: 34747967 DOI: 10.1039/d1ob02098f] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
9
Hong SW, Oh GJ, Hwang GT. 2‐Dimethylaminofluorene‐Labeled 2'‐Deoxyuridine as a Turn‐On Fluorescent Probe for i‐Motif DNA. ChemistrySelect 2021. [DOI: 10.1002/slct.202102658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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