Degradation of functionalized alkanethiolate monolayers by 0–18 eV electrons

Electron-induced hydroamination of ethane as compared to ethene: implications for the reaction mechanism

The properties of carbonaceous materials with respect to various applications are enhanced by incorporation of nitrogen-containing moieties like, for instance, amino groups. Therefore, processes that allow the introduction of such functional groups into hydrocarbon compounds are of utmost interest. Previous studies have demonstrated that hydroamination reactions which couple amines to unsaturated sites within hydrocarbon molecules do not only proceed in the presence of suitably tailored catalysts but can also be induced and controlled by electron irradiation. However, studies on electron-induced hydroaminations so far were guided by the hypothesis that unsaturated hydrocarbons are required for the reaction while the reaction would be much less efficient in the case of saturated hydrocarbons. The present work evaluates the validity of this hypothesis by post-irradiation thermal desorption experiments that monitor the electron energy-dependent yield of ethylamine after electron irradiation of mixed C2H4:NH3 and C2H6:NH3 ices with the same composition and thickness. The results reveal that, in contrast to the initial assumption, ethylamine is formed with similar efficiency in both mixed ices. From the dependence of the product yields on the electron energy, we conclude that the reaction in both cases is predominantly driven by electron ionization of NH3. Ethylamine is formed via alternative reaction mechanisms by which the resulting NH2˙ radicals add to C2H4 and C2H6, respectively. The similar efficiency of amine formation in unsaturated and saturated hydrocarbons demonstrates that electron irradiation in the presence of NH3 is a more versatile tool for introducing nitrogen into carbonaceous materials than previously anticipated.

Towards Improved Humidity Sensing Nanomaterials via Combined Electron and NH3 Treatment of Carbon-Rich FEBID Deposits

Focused Electron Beam Induced Deposition (FEBID) is a unique tool to produce nanoscale materials. The resulting deposits can be used, for instance, as humidity or strain sensors. The humidity sensing concept relies on the fact that FEBID using organometallic precursors often yields deposits which consist of metal nanoparticles embedded in a carbonaceous matrix. The electrical conductivity of such materials is altered in the presence of polar molecules such as water. Herein, we provide evidence that the interaction with water can be enhanced by incorporating nitrogen in the deposit through post-deposition electron irradiation in presence of ammonia (NH₃). This opens the perspective to improve and tune the properties of humidity sensors fabricated by FEBID. As a proof-of-concept experiment, we have prepared carbonaceous deposits by electron irradiation of adsorbed layers of three different precursors, namely, the aliphatic hydrocarbon n-pentane, a simple alkene (2-methyl-2-butene), and the potential Ru FEBID precursor bis(ethylcyclopentadienyl)ruthenium(II). In a subsequent processing step, we incorporated C-N bonds in the deposit by electron irradiation of adsorbed NH₃. To test the resulting material with respect to its potential humidity sensing capabilities, we condensed sub-monolayer quantities of water (H₂O) on the deposit and evaluated their thermal desorption behavior. The results confirm that the desorption temperature of H₂O decisively depends on the degree of N incorporation into the carbonaceous residue which, in turn, depends on the chemical nature of the precursor used for deposition of the carbonaceous layer. We thus anticipate that the sensitivity of a FEBID-based humidity sensor can be tuned by a precisely timed post-deposition electron and NH₃ processing step.

Identifying and Rationalizing the Differing Surface Reactions of Low-Energy Electrons and Ions with an Organometallic Precursor

Surface reactions of electrons and ions with physisorbed organometallic precursors are fundamental processes in focused electron and ion beam-induced deposition (FEBID and FIBID, respectively) of metal-containing nanostructures. Markedly different surface reactions occur upon exposure of nanometer-scale films of (η⁵-Cp)Fe(CO)₂Re(CO)₅ to low-energy electrons (500 eV) compared to argon ions (860 eV). Electron-induced surface reactions are initiated by electronic excitation and fragmentation of (η⁵-Cp)Fe(CO)₂Re(CO)₅, causing half of the CO ligands to desorb. Residual CO ligands decompose under further electron irradiation. In contrast, Ar⁺-induced surface reactions proceed by an ion-molecule momentum/energy transfer process, causing the desorption of all CO ligands without significant ion-induced precursor desorption. This initial decomposition step is followed by ion-induced sputtering of the deposited atoms. The fundamental insights derived from this study can be used not only to rationalize the composition of deposits made by FEBID and FIBID but also to inform the choice of a charged particle deposition strategy and the design of new precursors for these emerging nanofabrication tools.

Design, Synthesis, and Evaluation of CF3AuCNR Precursors for Focused Electron Beam-Induced Deposition of Gold

The Au(I) complexes CF₃AuCNMe (1a) and CF₃AuCN ^tBu (1b) were investigated as Au(I) precursors for focused electron beam-induced deposition (FEBID) of metallic gold. Both 1a and 1b are sufficiently volatile for sublimation at 125 ± 1 mTorr in the temperature range of roughly 40-50 °C. Electron impact mass spectra of 1a-b show gold-containing ions resulting from fragmenting the CF₃ group and the CNR ligand, whereas in negative chemical ionization of 1a-b, the major fragment results from dealkylation of the CNR ligand. Steady-state depositions from 1a in an Auger spectrometer produce deposits with a similar gold content to the commercial precursor Me₂Au(acac) (3) deposited under the same conditions, while the gold content from 1b is less. These results enable us to suggest the likely fate of the CF₃ and CNR ligands during FEBID.

Electron-induced chemistry of surface-grown coordination polymers with different linker anions

Electron beam processing of surface-grown coordination polymers is a versatile approach to the fabrication of nanoscale surface structures. Depending on their molecular components, these materials can be converted into pure metallic particles or they can be activated to become a template for the spatially selective decomposition of suitable gaseous precursor molecules and subsequent autocatalytic growth of deposits. However, insight into the fundamental electron-induced chemistry for such processes has been scarce so far. Therefore, we investigated the electron-induced reactions of three self-assembled copper-containing materials, namely, copper(ii) oxalate, copper(ii) squarate, and copper(ii) 1,3,5-benzenetricarboxylate (HKUST-1) which were grown on the surface of self-assembled monolayers of mercaptoundecanoic acid in a layer-by-layer approach from copper(ii) acetate and various linker molecules. Changes incurred to these materials during electron irradiation were monitored by four complementary techniques. Reflection absorption infrared spectroscopy (RAIRS) and X-ray photoelectron spectroscopy (XPS) were used to identify the chemical species that are formed upon electron exposure. The temporal evolution of electron-stimulated desorption (ESD) of neutral volatile fragments was monitored to reveal the kinetics governing the decomposition of the different materials. Furthermore, the morphology was investigated by helium ion microscopy (HIM). A detailed analysis of the results for the different linker molecules provides new insights into the electron-induced chemistry of such surface-grown layers.

Plasmon-Driven Photocatalysis Leads to Products Known from E-beam and X-ray-Induced Surface Chemistry

Plasmonic metal nanostructures can concentrate incident optical fields in nanometer-sized volumes, called hot spots. This leads to enhanced optical responses of molecules in such a hot spot but also to chemical transformations, driven by plasmon-induced hot carriers. Here, we employ tip-enhanced Raman spectroscopy (TERS) to study the mechanism of these reactions in situ at the level of a single hot spot. Direct spectroscopic measurements reveal the energy distribution of hot electrons, as well as the temperature changes due to plasmonic heating. Therefore, charge-driven reactions can be distinguished from thermal reaction pathways. The products of the hot-carrier-driven reactions are strikingly similar to the ones known from X-ray or e-beam-induced surface chemistry despite the >100-fold energy difference between visible and X-ray photons. Understanding the analogies between those two scenarios implies new strategies for rational design of plasmonic photocatalytic reactions and for the elimination of photoinduced damage in plasmon-enhanced spectroscopy.

Electron induced surface reactions of (η5-C5H5)Fe(CO)2Mn(CO)5, a potential heterobimetallic precursor for focused electron beam induced deposition (FEBID)

Electron-induced surface reactions of (η⁵-C₅H₅)Fe(CO)₂Mn(CO)₅were exploredin situunder ultra-high vacuum conditions using X-ray photoelectron spectroscopy and mass spectrometry.

Electron induced surface reactions of organometallic metal(hfac)₂ precursors and deposit purification

The elementary processes associated with electron beam-induced deposition (EBID) and post-deposition treatment of structures created from three metal(II)(hfac)2 organometallic precursors (metal = Pt, Pd, Cu; hfac = CF3C(O)CHC(O)CF3) have been studied using surface analytical techniques. Electron induced reactions of adsorbed metal(II)(hfac)2 molecules proceeds in two stages. For comparatively low electron doses (doses <1 × 10(17) e(-)/cm(2)) decomposition of the parent molecules leads to loss of carbon and oxygen, principally through the formation of carbon monoxide. Fluorine and hydrogen atoms are also lost by electron stimulated C-F and C-H bond cleavage, respectively. Collectively, these processes are responsible for the loss of a significant fraction (≥ 50%) of the oxygen and fluorine atoms, although most (>80%) of the carbon atoms remain. As a result of these various transformations the reduced metal atoms become encased in an organic matrix that is stabilized toward further electron stimulated carbon or oxygen loss, although fluorine and hydrogen can still desorb in the second stage of the reaction under the influence of sustained electron irradiation as a result of C-F and C-H bond cleavage, respectively. This reaction sequence explains why EBID structures created from metal(II)(hfac)2 precursors in electron microscopes contain reduced metal atoms embedded within an oxygen-containing carbonaceous matrix. Except for the formation of copper fluoride from Cu(II)(hfac)2, because of secondary reactions between partially reduced copper atoms and fluoride ions, the chemical composition of EBID films and behavior of metal(II)(hfac)2 precursors was independent of the transition metal's chemical identity. Annealing studies of EBID structures created from Pt(II)(hfac)2 suggest that the metallic character of deposited Pt atoms could be increased by using post deposition annealing or elevated substrate temperatures (>25 °C) during deposition. By exposing EBID structures created from Cu(II)(hfac)2 to atomic oxygen followed by atomic hydrogen, organic contaminants could be abated without annealing.

Selective terminal function modification of SAMs driven by low-energy electrons (0-15 eV)

Low-energy electron induced degradation of a model self-assembled monolayer (SAM) of acid terminated alkanethiol was studied under ultra-high vacuum (UHV) conditions at room and low (~40 K) temperatures. Low-energy electron induced chemical modifications of 11-mercaptoundecanoic acid (MUA, HS-(CH2)10-COOH) SAMs deposited on gold were probed in situ as a function of the irradiation energy (<11 eV) by combining two complementary techniques: High Resolution Electron Energy Loss Spectroscopy (HREELS), a surface sensitive vibrational spectroscopy technique, and Electron Stimulated Desorption (ESD) analysis of neutral fragments. The SAM's terminal functions were observed to be selectively damaged at around 1 eV by a resonant electron attachment mechanism, observed to decay by CO, CO2 and H2O formation and desorption. CO2 and H2O were also directly identified at low temperature by vibrational analysis of the irradiated SAMs. At higher irradiation energy, both terminal functions and spacer alkyl chains are damaged upon electron irradiation, by resonant and non-resonant processes.

Oxygen attachment on alkanethiolate SAMs induced by low-energy electron irradiation

Reactions of (18)O2 with self-assembled monolayer (SAM) films of 1-dodecanethiol, 1-octadecanethiol, 1-butanethiol, and benzyl mercaptan chemisorbed on gold were studied by the electron stimulated desorption (ESD) of anionic fragments over the incident electron energy range 2-20 eV. Dosing the SAMs with (18)O2 at 50 K results in the ESD of (18)O(-) and (18)OH(-). Electron irradiation of samples prior to (18)O2 deposition demonstrates that intensity of subsequent (18)O(-) and (18)OH(-) desorption signals increase with electron fluence and that in the absence of electron preirradiation, no (18)O(-) and (18)OH(-) ESD signals are observed, since oxygen is unable to bind to the SAMs. A minimum incident electron energy of 6-7 eV is required to initiate the binding of (18)O2 to the SAMs. O2 binding is proposed to proceed by the formation of CHx-1(•) radicals via resonant dissociative electron attachment and nonresonant C-H dissociation processes. The weaker signals of (18)O(-) and (18)OH(-) from short-chain SAMs are related to the latter's resistance to electron-induced damage, due to the charge-image dipole quenching and electron delocalization. Comparison between the present results and those for DNA oligonucleotides self-assembled on Au (Mirsaleh-Kohan, N. et al. J. Chem. Phys. 2012, 136, 235104) indicates that the oxygen binding mechanism is common to both systems.

Modification of nitrile-terminated biphenylthiol self-assembled monolayers by electron irradiation and related applications

Here we describe the behavior of self-assembled monolayers (SAMs) of 4'-cyanobiphenyl-4-thiol (CBPT) on Au(111) upon electron irradiation. Under such a treatment, the aromatic framework of CBPT SAMs is laterally cross-linked while the nitrile groups, located at the SAM-ambience interface, are reduced to active amine moieties which can be used as docking sites for the coupling of other species. This makes CBPT monolayers as a promising system for conventional and chemical lithography as well as for nanofabrication. Along these lines, we demonstrate the preparation of complex polymer brushes, patterning of the underlying substrate, and fabrication of molecule-thin, free-standing membranes on the basis of CBPT SAMs. The balance between the application-favorable processes and defragmentation in these films is studied in detail, and comparison to the well-established (for the relevant applications) system of 4'-nitrobiphenyl-4-thiols is performed. Taking CBPT SAMs as a model system, the effect of the energy of the primary electrons on the extent of the chemical transformation and cross-linking in substituted aromatic SAMs is investigated.

Characterization of dense arrays of chemiresistor vapor sensors with submicrometer features and patterned nanoparticle interface layers

The performance of arrays of small, densely integrated chemiresistor (CR) vapor sensors with electron-beam patterned interface layers of thiolate-monolayer-protected gold nanoparticles (MPNs) is explored. Each CR in the array consists of a 100-μm(2) interdigital electrode separated from adjacent devices by 4 μm. Initial studies involved four separate arrays, each containing four CRs coated with one of four different MPNs, which were calibrated with five vapors before and after MPN-film patterning. MPNs derived from n-octanethiol (C8), 4-(phenylethynyl)-benzenethiol (DPA), 6-phenoxyhexane-1-thiol (OPH), and methyl-6-mercaptohexanoate (HME) were tested. Parallel calibrations of MPN-coated thickness-shear-mode resonators (TSMR) were used to derive partition coefficients of unpatterned films and to assess transducer-dependent factors affecting responses. A 600-μm(2) 4-CR array with four different patterned MPN interface layers, in which the MPN derived from 7-hydroxy-7,7-bis(trifluoro-methyl)heptane-1-thiol (HFA) was substituted for HME, was then characterized. This is the smallest multi-MPN array yet reported. Reductions in the diversity of the collective response patterns are observed with the patterned films, but projected vapor discrimination rates remain high. The use of such arrays as ultralow-dead-volume detectors in microscale gas chromatographic analyzers is discussed.

Adjustment of the bioresistivity by electron irradiation: self-assembled monolayers of oligo(ethyleneglycol)-terminated alkanethiols with embedded cleavable group

The bioresistivity of protein-repelling films, such as e.g. oligoethyleneglycol (OEG) bearing self-assembled monolayers (SAMs), can be adjusted by electron irradiation. We have studied the effect of an embedded irradiation-sensitive functional group (so called "weak link") on the irradiation sensitivity of such films. As test systems, we used two OEG-substituted alkanethiolate SAMs with different lengths of the OEG chain and a sulfone group serving as a "weak link" moiety; this group was embedded between the OEG and alkyl chains of the target molecules. The expected cleavage of the molecular chains at the predetermined "weak link" position was found to be accompanied by direct damage of the OEG matrix, with a dominance of the latter process in the case of a long OEG chain. At the same time, in the case of short OEG chain, the insertion of sulfone group resulted in a noticeable gain in the irradiation sensitivity of the respective SAMs and, consequently, in enhanced tunability of their protein-adhesive properties. These films, along with other OEG-substituted SAMs and polymer layers with and without an embedded weak link moiety, can be used as primary matrices for the fabrication of different protein patterns by electron beam lithography.

Bringing electrons and microarray technology together

Low-energy secondary electrons are the most abundant radiolysis species which are thought to be able to attach to and damage DNA via formation and decay of localized molecular resonances involving DNA components. In this study, we analyze the consequences of low-energy electron impact on the ability of DNA to hybridize (i.e., to form the duplex). Specifically, single-stranded thymine DNA oligomers tethered to a gold surface are irradiated with very low-energy electrons (E = 3 eV, which is below the 7.5 eV ionization threshold of DNA) and subsequently exposed to a dye-marked complementary strand to quantify by a fluorescence method the electron induced damage. The damage to (dT)25 oligomers is detected at quite low electron doses with only about 300 electrons per oligomer being sufficient to completely preclude its hybridization. In the microarray format, the method can be used for a rapid screening of the sequence dependence of the DNA-electron interaction. We also show for the first time that the DNA reactions at surfaces can be imaged by secondary electron (SE) emission with both high analytical and spatial sensitivity. The SE micrographs indicate that strand breaks induced by the electrons play a significant role in the reaction mechanism.

Exposure of Monomolecular Lithographic Patterns to Ambient: An X-ray Photoemission Spectromicroscopy Study

Patterned self-assembled monolayers (SAMs) of alkanethiolates (AT) on Au and Ag substrates were imaged and characterized by scanning photoelectron microscopy (SPEM). The patterns were prepared in situ by direct writing with the zone-plate-focused X-ray beam provided by the SPEM station. Whereas both AT/Au and AT/Ag behaved alike upon the irradiation, which resulted in similar contrasts in the fabricated patterns and similar microspot spectra from the irradiated areas, the intensity relationship between the patterned and nonpatterned areas changed by different pathways for the Au and Ag substrates after the exposure of the patterns to ambient. The SPEM data imply that weakly bound molecular fragments are desorbed from the irradiated areas upon air exposure in the case of Ag, whereas adsorption of airborne molecules from ambient occurs for the Au substrate. The origin of the observed differences is presumably related to the specific branching patterns of irradiation-induced modification of AT/Au and AT/Ag.

Modification of Monomolecular Self-Assembled Films by Nitrogen−Oxygen Plasma

The modification of octadecanethiolate self-assembled monolayers on Au and Ag by nitrogen-oxygen downstream microwave plasma with variable oxygen content (up to 1%) has been studied by synchrotron-based high-resolution X-ray photoelectron spectroscopy. The primary processes were dehydrogenation, desorption of hydrocarbon and sulfur-containing species, and the oxidation of the alkyl matrix and headgroup-substrate interface. The exact character and the rates of the plasma-induced changes were found to be dependent on the substrate and plasma composition, with the processes in the aliphatic matrix and headgroup-substrate interface being mostly decoupled. In particular, the rates of all major plasma-induced processes were found to be directly proportional to the oxygen content in the plasma, which can be, thus, considered as a measure of the plasma reactivity. Along with the character of the observed changes, exhibiting a clear dominance of the oxidative processes, this suggests that the major effect of the oxygen-nitrogen downstream microwave plasma is provided by reactive oxygen-derived species in the downstream region, viz. long-living oxygen radicals and metastable species.

The Mechanism of Hydrogen Formation Induced by Low-Energy Electron Irradiation of Hexadecanethiol Self-Assembled Monolayers

The desorption of molecular hydrogen during low-energy electron irradiation of self-assembled monolayers containing n-alkanethiols has been previously reported, yet to date, there is no consensus as to the mechanism for the formation of this ubiquitous product. In this study, mixed monolayers containing known ratios of perhydrogenated and perdeuterated alkanethiols were chemisorbed to Au(111)/mica substrates and used as targets for low-energy electron irradiation; by measuring the electron-stimulated production of H(2), D(2), and HD as a function of the film composition, we unambiguously show that the desorbing molecular hydrogen is formed via a two-step bimolecular reaction process. The initial electron-molecule scattering event produces a reactive atomic fragment, which then abstracts a hydrogen atom from a nearby molecular site to produce the measured bimolecular yields; the contribution of one-step unimolecular dissociation channels to the overall molecular hydrogen yields is below the approximately 5% detection limit. The dependence of the electron-induced modifications to the film on the incident electron energy suggests that the primary event is dissociative electron attachment, and that the primary reactive fragment is most likely H(-). Quantitative analysis of the product yields shows that while approximately 80% of the molecular hydrogen is formed by this bimolecular mechanism within the film, the remaining 20% is formed from reactive atomic fragments that are ejected from the film and subsequently react with residual H(2)O adsorbed on the chamber walls.

Degradation mechanisms and environmental effects on perfluoropolyether, self-assembled monolayers, and diamondlike carbon films

The degradation mechanisms and durability of selected lubricants and environmental effects on the lubricants which could be used for microelectromechanical/nanoelectromechanical systems (MEMS/NEMS) applications were studied in this paper. The degradation of perfluoropolyether (Z-DOL), four self-assembled monolayers (SAMs)-hexadecane thiol, perfluoroalkylsilane, and alkylsilane (C8 and C18)-and diamondlike carbon (DLC) films was investigated in high vacuum. Gaseous products and friction force were detected using a quadrupole mass spectrometer and strain gauges. It is believed that triboelectrical reaction and mechanical scission cause the degradation of Z-DOL. SAMs are believed to degrade by cleavage at an interfacial bond accompanied with triboelectrical reactions. DLC is believed to degrade by mechanical shear and thermal oxidation. Environmental effects on lubricant films were studied in high vacuum, argon, and air at various humidity levels. It was found that the environment has a significant influence on the lubricant performance. The lubricant films exhibit high friction and low durability in high vacuum. Oxygen in the air can cause the thermal oxidation of SAMs and DLC films. Water molecules can act as a lubricant for Z-DOL films at a moderate humidity level, while they can penetrate the Z-DOL films at a high humidity level. Water molecules can detach the SAM molecules from the substrate, whereas, for DLC films, water molecules can act as a lubricant.

Modification and Stability of Aromatic Self-Assembled Monolayers upon Irradiation with Energetic Particles

We have studied ion and electron irradiation of self-assembled monolayers (SAMs) of 2-(4'-methyl-biphenyl-4yl)-ethanethiol (BP2, CH3-C6H4C6H4CH2CH2-SH), phenyl mercaptan (PEM, C6H5CH2CH2-SH), and 4'-methyl-biphenyl-4-thiol (BP0, CH3-C6H4C6H4-SH) deposited on Au(111) substrates. Desorption of neutral particles from PEM/Au and BP2/Au was investigated using laser ionization in combination with mass spectrometry. The ion-induced damage of both BP2 and PEM SAMs is very efficient and interaction with a single ion leads to the modification of tens of molecules. This feature is the result of a desorption process caused by a chemical reaction initiated by an ion impact. Both for ions and electrons, experiments indicate that the possibility for scission of the Au-S bond strongly depends on the chemical nature of the SAM system. We attribute the possible origin of this effect to the orientation of the Au-S-C angle or adsorption sites of molecules. The analysis of electron-irradiated PEM/Au and BP2/Au, using ion-initiated laser probing, enabled measurements of the cross section for the electron-induced damage of the intact molecule or specific fragment. Analysis of electron-irradiated BP0/Au by using time-of-flight secondary ion mass spectrometry (TOF-SIMS) provides direct evidence for the quasi-polymerization process induced by electron irradiation.

Modification of aliphatic self-assembled monolayers by free-radical-dominant plasma: the role of the plasma composition

Modification of octadecanethiolate self-assembled monolayers on Au by nitrogen-oxygen or argon-oxygen downstream microwave plasma with a low oxygen content (estimated below several percent) has been studied by synchrotron-based high-resolution X-ray photoelectron spectroscopy and water contact angle measurements. For both types of plasma, the primary processes were found to be the loss of conformational and orientational order and the oxidation of the alkyl matrix and headgroup-substrate interface. At the same time, the film modification occurred much faster and with different intermediates for the nitrogen plasma than for the argon plasma. The reasons for these differences are considered in terms of the different reactivities and different efficiencies of the energy transfer between the plasma constituents in these two types of plasma.

Strong temperature dependence of irradiation effects in organic layers

Radiation damage of self-assembled monolayers, which are prototypes of thin organic layers and highly organized biological systems, shows a strong dependence on temperature. Two limiting cases could be identified. Reactions involving transport of single atoms and small fragments proceed nearly independent of temperature. Reactions requiring transport of heavy fragments are, however, efficiently quenched by cooling. We foresee the combined use of temperature and irradiation by electrons or photons for advanced tailoring of self-assembled monolayers on surfaces. In addition, our results have direct implications for cryogenic approaches in advanced electron and x-ray microscopy and spectroscopy of biological macromolecules and cells.