1
|
Fu L, Du Q, Sai L, Zhao J. Accelerating Global Search of Large-Sized Silver Clusters Using Cluster Graph Attention Network. J Phys Chem Lett 2024; 15:9160-9166. [PMID: 39213499 DOI: 10.1021/acs.jpclett.4c01953] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/04/2024]
Abstract
Great efforts have been devoted to understanding the stability and reactivity of silver clusters, which usually depend on geometric structures, electronic configuration, and cluster size. Despite the fact that the jellium model and Wulff construction rule have successfully rationalized the stable clusters with "magic number" behavior, some experiments imply that silver clusters with 48 valence electrons also possess puzzling enhanced stability. In this work, using a recently developed deep learning technology, i.e., cluster graph attention network (CGANet), combined with a homemade comprehensive genetic algorithm (CGA) program, we searched the global minimum (GM) structures of Agn (n = 30-60) clusters with graphics processing unit acceleration, whose efficiency is about 2 orders of magnitude higher than that of the conventional density functional theory (DFT) calculations. GM structures and some representative isomers are reported at each size, revealing the competitive structural patterns based on truncated octahedra and icosahedra as well as the icosahedra-based layer-by-layer growth mode of large-sized Ag clusters. Most importantly, the size-dependent evolution behavior of structural and electronic properties of Agn (n = 30-60) clusters can successfully explain the observed stability at Ag48. Therefore, CGANet provides a powerful tool for rapidly exploring the potential energy surface of atoms with an accuracy comparable to that of DFT.
Collapse
Affiliation(s)
- Li Fu
- Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Dalian University of Technology), Ministry of Education, Dalian 116024, China
| | - Qiuying Du
- College of Physics and Electronic Information, Inner Mongolia Normal University, Hohhot 010022, China
| | - Linwei Sai
- Department of Mathematics, Hohai University, Changzhou 213200, China
| | - Jijun Zhao
- Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Dalian University of Technology), Ministry of Education, Dalian 116024, China
- Guangdong Basic Research Center of Excellence for Structure and Fundamental Interactions of Matter, Guangdong Provincial Key Laboratory of Quantum Engineering and Quantum Materials, School of Physics, South China Normal University, Guangzhou 510006, China
| |
Collapse
|
2
|
Liu D, Zhu H, Gong X, Yuan S, Ma H, He P, Fan Y, Zhao W, Ren H, Guo W. Understanding and controlling the formation of single-atom site from supported Cu 10 cluster by tuning CeO 2 reducibility: Theoretical insight into the Gd-doping effect on electronic metal-support interaction. J Colloid Interface Sci 2024; 661:720-729. [PMID: 38320408 DOI: 10.1016/j.jcis.2024.01.174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 01/18/2024] [Accepted: 01/25/2024] [Indexed: 02/08/2024]
Abstract
Controlling the formation of single-atom (SA) sites from supported metal clusters is an important and interesting issue to effectively improve the catalytic performance of heterogeneous catalysts. For extensively studied CO oxidation over metal/CeO2 systems, the SA formation and stabilization under reaction conditions is generally attributed to CO adsorption, however, the pivotal role played by the reducible CeO2 support and the underlying electronic metal-support interaction (EMSI) are not yet fully understood. Based on a ceria-supported Cu10 catalyst model, we performed density functional theory calculations to investigate the intrinsic SA formation mechanism and discussed the synergistic effect of Gd-doped CeO2 and CO adsorption on the SA formation. The CeO2 reducibility is tuned with doped Gd content ranging from 12.5 % ∼ 25 %. Based on ab initio thermodynamic and ab initio molecular dynamics, the critical condition for SA formation was identified as 21.875 % Gd-doped CeO2 with CO-saturated adsorption on Cu10. Electronic analysis revealed that the open-shell lattice Oδ- (δ < 2) generated by Gd doping facilitates the charge transfer from the bottom-corner Cu (Cubc) to CeO2. The CO-saturated adsorption further promotes this charge transfer process and enhances the EMSI between Cubc and CeO2, leading to the disintegration of Cubc from Cu10 and subsequent formation of the active SA site.
Collapse
Affiliation(s)
- Dongyuan Liu
- School of Materials Science and Engineering, China University of Petroleum (East China), Qingdao, Shandong 266580, PR China
| | - Houyu Zhu
- School of Materials Science and Engineering, China University of Petroleum (East China), Qingdao, Shandong 266580, PR China.
| | - Xiaoxiao Gong
- State Key Laboratory of Molecular & Process Engineering, SINOPEC Research Institute of Petroleum Processing Co., Ltd., Beijing 10083, PR China
| | - Saifei Yuan
- School of Materials Science and Engineering, China University of Petroleum (East China), Qingdao, Shandong 266580, PR China
| | - Hao Ma
- School of Materials Science and Engineering, China University of Petroleum (East China), Qingdao, Shandong 266580, PR China
| | - Ping He
- School of Materials Science and Engineering, China University of Petroleum (East China), Qingdao, Shandong 266580, PR China
| | - Yucheng Fan
- School of Materials Science and Engineering, China University of Petroleum (East China), Qingdao, Shandong 266580, PR China
| | - Wen Zhao
- School of Materials Science and Engineering, China University of Petroleum (East China), Qingdao, Shandong 266580, PR China
| | - Hao Ren
- School of Materials Science and Engineering, China University of Petroleum (East China), Qingdao, Shandong 266580, PR China
| | - Wenyue Guo
- School of Materials Science and Engineering, China University of Petroleum (East China), Qingdao, Shandong 266580, PR China.
| |
Collapse
|
3
|
Morgade CIN, Schvval AB, García G, Cabeza GF. Band edges positions prediction of the of Ag nanocluster-decorated titania surfaces and their relationship to NO and NO 2 interaction from first-principles calculations. J Mol Graph Model 2023; 124:108531. [PMID: 37311332 DOI: 10.1016/j.jmgm.2023.108531] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2023] [Revised: 05/13/2023] [Accepted: 05/23/2023] [Indexed: 06/15/2023]
Abstract
Metal nanoclusters deposited on oxides have been widely used in photocatalysis playing an important role in the design of model catalysts with applications in heterogeneous catalysis. In particular, we are interested in the potential activity of these cluster-supported systems for the removal of nitrogen oxides either by possible catalytic reduction and/or by their adsorption. In this work, using first-principles methods, we evaluate the main characteristics of Agn (n = 1-4) nanoclusters isolated and deposited on anatase TiO2(101) and rutile TiO2(110) surfaces. Our results indicate that they are preferably adsorbed on rutile surface. The different formation energy at each surface can be explained using a Bader charge analysis. Particularly for Ag4 the lowest formation energy is obtained for tetrahedral geometry while the isolated Ag4 geometry is planar. Small silver deposits placed superficially on titania surfaces modify its electronic structures and improve the conduction band edges positions for possible NO reduction. Band edges positions with respect to the vacuum potential have been studied. The comparison of the conduction band minimum with the reduction potentials of NO/N2O and N2O/N2 shows that they are higher, being Ag3 on rutile and Ag1, Ag2 and Ag4P on anatase better for NO reduction. To complete the analysis, the calculation of work function, energy gap, ionization energy and electron affinity are relevant since they allow the location of semiconductor band edges at point of zero charge. Finally, the adsorption of nitrogen oxides is studied where the NO2 adsorption is favored over NO.
Collapse
Affiliation(s)
- Cecilia I N Morgade
- Instituto de Física del Sur (IFISUR), CONICET- Departamento de Física, Universidad Nacional del Sur, Av. Alem 1253, Bahía Blanca, Argentina; Universidad Tecnológica Nacional, FRBB, 11 de abril 461, Bahía Blanca, Argentina
| | - Ana B Schvval
- Instituto de Química (INQUISUR) CONICET- Departamento de Química, Universidad Nacional del Sur, Av. Alem 1253, Bahía Blanca, Argentina
| | - Griselda García
- Instituto de Física, Pontificia Universidad Católica de Chile, 7820436, Santiago, Chile; Centro de Investigación en Nanotecnología y Materiales Avanzados, Pontificia Universidad Católica de Chile, 6904411, Santiago, Chile
| | - Gabriela F Cabeza
- Instituto de Física del Sur (IFISUR), CONICET- Departamento de Física, Universidad Nacional del Sur, Av. Alem 1253, Bahía Blanca, Argentina.
| |
Collapse
|
4
|
Settem M, Roncaglia C, Ferrando R, Giacomello A. Structural transformations in Cu, Ag, and Au metal nanoclusters. J Chem Phys 2023; 159:094303. [PMID: 37668252 DOI: 10.1063/5.0159257] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Accepted: 08/15/2023] [Indexed: 09/06/2023] Open
Abstract
Finite-temperature structures of Cu, Ag, and Au metal nanoclusters are calculated in the entire temperature range from 0 K to melting using a computational methodology that we proposed recently [M. Settem et al., Nanoscale 14, 939 (2022)]. In this method, Harmonic Superposition Approximation (HSA) and Parallel Tempering Molecular Dynamics (PTMD) are combined in a complementary manner. HSA is accurate at low temperatures and fails at higher temperatures. PTMD, on the other hand, effectively samples the high temperature region and melts. This method is used to study the size- and system-dependent competition between various structural motifs of Cu, Ag, and Au nanoclusters in the size range 1-2 nm. Results show that there are mainly three types of structural changes in metal nanoclusters, depending on whether a solid-solid transformation occurs. In the first type, the global minimum is the dominant motif in the entire temperature range. In contrast, when a solid-solid transformation occurs, the global minimum transforms either completely to a different motif or partially, resulting in the co-existence of multiple motifs. Finally, nanocluster structures are analyzed to highlight the system-specific differences across the three metals.
Collapse
Affiliation(s)
- Manoj Settem
- Dipartimento di Ingegneria Meccanica e Aerospaziale, Sapienza Università di Roma, via Eudossiana 18, 00184 Roma, Italy
| | - Cesare Roncaglia
- Dipartimento di Fisica dell'Università di Genova, via Dodecaneso 33, 16146 Genova, Italy
| | - Riccardo Ferrando
- Dipartimento di Fisica dell'Università di Genova and CNR-IMEM, via Dodecaneso 33, 16146 Genova, Italy
| | - Alberto Giacomello
- Dipartimento di Ingegneria Meccanica e Aerospaziale, Sapienza Università di Roma, via Eudossiana 18, 00184 Roma, Italy
| |
Collapse
|
5
|
Liu W, Huang L, Meng L, Hu J, Xing X. The global minimum of Ag 30: a prolate spheroidal structure predicted using a genetic algorithm with incomplete local optimizations at the DFT level. Phys Chem Chem Phys 2023; 25:14303-14310. [PMID: 37183519 DOI: 10.1039/d3cp00791j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Genetic algorithms have been widely used to explore global minimum points of atomic clusters, and their incorporation with ab initio calculations (including density functional theory methods) as local optimization approaches increases their ability to accurately locate the global minimum points on complicated potential energy surfaces. However, the local optimizations using ab initio calculations significantly increase the computational cost relative to those based on empirical or semi-empirical calculations. Herein, we develop a genetic algorithm program with an incomplete local optimization strategy at the DFT level. Using several representative clusters as test examples, this program showed high efficiency in locating their global minimum points. The low-lying isomers of Ag30 were explored using this program, and the determined global minimum is a prolate spheroidal structure. The elongated spheroidal shape causes degeneracy lifting of the free electron shells, and endows Ag30 with a large HOMO-LUMO gap. The sharp increase of silver clusters' reactivity around the sizes with 30 valence electrons observed in our previous experiments could be correlated with this theoretical figure.
Collapse
Affiliation(s)
- Wen Liu
- School of Chemical Science and Engineering, Shanghai Key Lab of Chemical Assessment and Sustainability, Tongji University, 1239 Siping Road, Shanghai, 200092, China.
| | - Lulu Huang
- School of Chemical Science and Engineering, Shanghai Key Lab of Chemical Assessment and Sustainability, Tongji University, 1239 Siping Road, Shanghai, 200092, China.
| | - Lei Meng
- School of Chemical Science and Engineering, Shanghai Key Lab of Chemical Assessment and Sustainability, Tongji University, 1239 Siping Road, Shanghai, 200092, China.
| | - Jin Hu
- School of Chemical Science and Engineering, Shanghai Key Lab of Chemical Assessment and Sustainability, Tongji University, 1239 Siping Road, Shanghai, 200092, China.
| | - Xiaopeng Xing
- School of Chemical Science and Engineering, Shanghai Key Lab of Chemical Assessment and Sustainability, Tongji University, 1239 Siping Road, Shanghai, 200092, China.
| |
Collapse
|
6
|
Du Q, Huang L, Fu J, Cao Y, Xing X, Zhao J. Single atom alloy clusters Ag n-1X - (X = Cu, Au; n = 7-20) reacting with O 2: Symmetry-adapted orbital model. J Chem Phys 2023; 158:014306. [PMID: 36610979 DOI: 10.1063/5.0124095] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
Single atom alloy AgCu catalysts have attracted great attention, since doping the single Cu atom introduces narrow free-atom-like Cu 3d states in the electronic structure. These peculiar electronic states can reduce the activation energies in some reactions and offer valuable guidelines for improving catalytic performance. However, the geometric tuning effect of single Cu atoms in Ag catalysts and the structure-activity relationship of AgCu catalysts remain unclear. Here, we prepared well-resolved pristine Agn - as well as single atom alloy Agn-1Cu- and Agn-1Au- (n = 7-20) clusters and investigated their reactivity with O2. We found that replacing an Ag atom in Agn - (n = 15-18) with a Cu atom significantly increases the reactivity with O2, while replacement of an Ag with an Au atom has negligible effects. The adsorption of O2 on Agn - or Agn-1Cu- clusters follows the single electron transfer mechanism, in which the cluster activity is dependent on two descriptors, the energy level of α-HOMO (strong correlation) and the α-HOMO-LUMO gap (weak correlation). Our calculation demonstrated that the cluster arrangements caused by single Cu atom alloying would affect the above activity descriptors and, therefore, regulates clusters' chemical activity. In addition, the observed reactivity of clusters in the representative sizes with n = 17-19 can also be interpreted using the symmetry-adapted orbital model. Our work provides meaningful information to understand the chemical activities of related single-atom-alloy catalysts.
Collapse
Affiliation(s)
- Qiuying Du
- College of Physics and Electronic Information, Inner Mongolia Normal University, 81 Zhaowuda Road, Hohhot, Inner Mongolia 010022, People's Republic of China
| | - Lulu Huang
- Shanghai Key Lab of Chemical Assessment and Sustainability, Department of Chemistry, Tongji University, 1239 Siping Road, Shanghai 200092, People's Republic of China
| | - Jiaqi Fu
- College of Physics and Electronic Information, Inner Mongolia Normal University, 81 Zhaowuda Road, Hohhot, Inner Mongolia 010022, People's Republic of China
| | - Yongjun Cao
- College of Physics and Electronic Information, Inner Mongolia Normal University, 81 Zhaowuda Road, Hohhot, Inner Mongolia 010022, People's Republic of China
| | - Xiaopeng Xing
- Shanghai Key Lab of Chemical Assessment and Sustainability, Department of Chemistry, Tongji University, 1239 Siping Road, Shanghai 200092, People's Republic of China
| | - Jijun Zhao
- Key Laboratory of Material Modification by Laser, Ion and Electron Beams (Dalian University of Technology), Ministry of Education, Dalian 116024, People's Republic of China
| |
Collapse
|
7
|
Probing the Roles of S Atom and Nanoparticle Size over Different Sizes of S-modified Cu and Pd Nanoparticles in Regulating Catalytic Performance of Acetylene Semi-hydrogenation. Chem Eng Sci 2023. [DOI: 10.1016/j.ces.2023.118494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
|
8
|
Zeng Y, Chen Y, Wu Y, Wang D, Liu X, Li L. Mechanism of Photocatalytic Reduction of CO 2 to CH 3OH by Cu Nanoparticle and Metal Atom (Ag, Au, Pd, Zn)-Doped Cu Catalyst: A Theoretical Study. Organometallics 2022. [DOI: 10.1021/acs.organomet.2c00186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yaping Zeng
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Yang Chen
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Yang Wu
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Danyang Wang
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Xiangyang Liu
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Laicai Li
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| |
Collapse
|
9
|
Buelna-García CE, Castillo-Quevedo C, Quiroz-Castillo JM, Paredes-Sotelo E, Cortez-Valadez M, Martin-del-Campo-Solis MF, López-Luke T, Utrilla-Vázquez M, Mendoza-Wilson AM, Rodríguez-Kessler PL, Vazquez-Espinal A, Pan S, de Leon-Flores A, Mis-May JR, Rodríguez-Domínguez AR, Martínez-Guajardo G, Cabellos JL. Relative Populations and IR Spectra of Cu 38 Cluster at Finite Temperature Based on DFT and Statistical Thermodynamics Calculations. Front Chem 2022; 10:841964. [PMID: 35300385 PMCID: PMC8921525 DOI: 10.3389/fchem.2022.841964] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2021] [Accepted: 01/24/2022] [Indexed: 11/13/2022] Open
Abstract
The relative populations of Cu38 isomers depend to a great extent on the temperature. Density functional theory and nanothermodynamics can be combined to compute the geometrical optimization of isomers and their spectroscopic properties in an approximate manner. In this article, we investigate entropy-driven isomer distributions of Cu38 clusters and the effect of temperature on their IR spectra. An extensive, systematic global search is performed on the potential and free energy surfaces of Cu38 using a two-stage strategy to identify the lowest-energy structure and its low-energy neighbors. The effects of temperature on the populations and IR spectra are considered via Boltzmann factors. The computed IR spectrum of each isomer is multiplied by its corresponding Boltzmann weight at finite temperature. Then, they are summed together to produce a final temperature-dependent, Boltzmann-weighted spectrum. Our results show that the disordered structure dominates at high temperatures and the overall Boltzmann-weighted spectrum is composed of a mixture of spectra from several individual isomers.
Collapse
Affiliation(s)
- Carlos Emiliano Buelna-García
- Departamento de Investigación en Polímeros y Materiales, Universidad de Sonora, Hermosillo, Mexico
- Organización Científica y Tecnológica del Desierto, Hermosillo, Mexico
| | - Cesar Castillo-Quevedo
- Departamento de Fundamentos del Conocimiento, Centro Universitario del Norte, Universidad de Guadalajara, Colotlán, Mexico
| | | | - Edgar Paredes-Sotelo
- Departamento de Investigación en Polímeros y Materiales, Universidad de Sonora, Hermosillo, Mexico
| | - Manuel Cortez-Valadez
- CONACYT-Departamento de Investigación en Física, Universidad de Sonora, Hermosillo, Mexico
| | | | - Tzarara López-Luke
- Instituto de Investigación en Metalurgia y Materiales, Universidad Michoacana de San Nicolás de Hidalgo, Ciudad Universitaria, Morelia, Mexico
| | | | | | - Peter L. Rodríguez-Kessler
- Laboratorio de Química Inorgánica y Materiales Moleculares, Facultad de Ingeniería, Universidad Autonoma de Chile, Santiago, Chile
| | - Alejandro Vazquez-Espinal
- Comput. Theor. Chem. Group Departamento de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello, Santiago, Chile
| | - Sudip Pan
- Fachbereich Chemie, Philipps-Universität Marburg, Marburg, Germany
| | - Aned de Leon-Flores
- Departamento de Ciencias Químico Biologicas, Universidad de Sonora, Hermosillo, Mexico
| | | | | | - Gerardo Martínez-Guajardo
- Unidad Académica de Ciencias Químicas, Área de Ciencias de la Salud, Universidad Autónoma de Zacatecas, Zacatecas, Mexico
| | | |
Collapse
|
10
|
Gallegos F, Meneses LM, Cuesta S, Santos JC, Arias J, Carrillo P, Pilaquinga F. Computational Modeling of the Interaction of Silver Clusters with Carbohydrates. ACS OMEGA 2022; 7:4750-4756. [PMID: 35187295 PMCID: PMC8851645 DOI: 10.1021/acsomega.1c04149] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Accepted: 12/23/2021] [Indexed: 06/14/2023]
Abstract
Silver nanoparticles are recognized for their numerous physical, biological, and pharmaceutical applications. In the present study, the interaction of silver clusters with monosaccharide molecules is examined to identify which molecule works better as a reducing agent in the application of a green synthesis approach. Geometry optimization of clusters containing one, three, and five silver atoms is performed along with the optimization of α-d-glucose, α-d-ribose, d-erythrose, and glyceraldehyde using density functional theory. Optimized geometries allow identifying the interaction formed in the silver cluster and monosaccharide complexes. An electron localization function analysis is performed to further analyze the interaction found and explain the reduction process in the formation of silver nanoparticles. The overall results indicate that glyceraldehyde presents the best characteristics to serve as the most efficient reducing agent.
Collapse
Affiliation(s)
- Felipe
E. Gallegos
- Laboratory
of Computational Chemistry, Chemical Science Department, Pontificia Universidad Católica del Ecuador, Quito 170143, Ecuador
| | - Lorena M. Meneses
- Laboratory
of Computational Chemistry, Chemical Science Department, Pontificia Universidad Católica del Ecuador, Quito 170143, Ecuador
| | - Sebastián
A. Cuesta
- Laboratory
of Computational Chemistry, Chemical Science Department, Pontificia Universidad Católica del Ecuador, Quito 170143, Ecuador
| | - Juan C. Santos
- Ingeniería
G-Mar LTDA, Peñalolén 7921490, Santiago, Chile
| | - Josefa Arias
- Laboratory
of Computational Chemistry, Chemical Science Department, Pontificia Universidad Católica del Ecuador, Quito 170143, Ecuador
| | - Pamela Carrillo
- Chemistry
Department, University of Liverpool, Liverpool L69 72D, United Kingdom
| | - Fernanda Pilaquinga
- Laboratory
of Nanotechnology, Chemical Sciences Department, Pontificia Universidad Católica del Ecuador, Quito 17012184, Ecuador
| |
Collapse
|
11
|
Viegas IMA, Gonçalves IWV, Santos BS, Fontes A, Pereira MGC, Pereira CF, Pereira GAL. Synthesis of hydrophilic Ag 2Se quantum dots optically optimized by multivariate strategies: an easy one-pot approach. NEW J CHEM 2022. [DOI: 10.1039/d2nj03696g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
A simple and fast aqueous synthesis of silver selenide quantum dots is proposed with the aid of multivariate optimization.
Collapse
Affiliation(s)
- Isabelle M. A. Viegas
- Department of Fundamental Chemistry, Federal University of Pernambuco, Recife, PE, 50740-560, Brazil
- Danish Offshore Technology Centre, Technical University of Denmark, Kgs. Lyngby, 2800, Denmark
| | - Ingrid W. V. Gonçalves
- Department of Fundamental Chemistry, Federal University of Pernambuco, Recife, PE, 50740-560, Brazil
| | - Beate S. Santos
- Department of Pharmaceutical Sciences, Federal University of Pernambuco, Recife, PE, 50740-521, Brazil
| | - Adriana Fontes
- Department of Biophysics and Radiobiology, Federal University of Pernambuco, Recife, PE, 50670-901, Brazil
| | - Maria Goreti C. Pereira
- Department of Fundamental Chemistry, Federal University of Pernambuco, Recife, PE, 50740-560, Brazil
| | - Claudete F. Pereira
- Department of Fundamental Chemistry, Federal University of Pernambuco, Recife, PE, 50740-560, Brazil
| | - Giovannia A. L. Pereira
- Department of Fundamental Chemistry, Federal University of Pernambuco, Recife, PE, 50740-560, Brazil
| |
Collapse
|
12
|
Effects of Temperature on Enantiomerization Energy and Distribution of Isomers in the Chiral Cu 13 Cluster. Molecules 2021; 26:molecules26185710. [PMID: 34577181 PMCID: PMC8471510 DOI: 10.3390/molecules26185710] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Revised: 09/02/2021] [Accepted: 09/17/2021] [Indexed: 11/21/2022] Open
Abstract
In this study, we report the lowest energy structure of bare Cu13 nanoclusters as a pair of enantiomers at room temperature. Moreover, we compute the enantiomerization energy for the interconversion from minus to plus structures in the chiral putative global minimum for temperatures ranging from 20 to 1300 K. Additionally, employing nanothermodynamics, we compute the probabilities of occurrence for each particular isomer as a function of temperature. To achieve that, we explore the free energy surface of the Cu13 cluster, employing a genetic algorithm coupled with density functional theory. Moreover, we discuss the energetic ordering of isomers computed with various density functionals. Based on the computed thermal population, our results show that the chiral putative global minimum strongly dominates at room temperature.
Collapse
|
13
|
Mai NT, Lan NT, Cuong NT, Tam NM, Ngo ST, Phung TT, Dang NV, Tung NT. Systematic Investigation of the Structure, Stability, and Spin Magnetic Moment of CrM n Clusters (M = Cu, Ag, Au, and n = 2-20) by DFT Calculations. ACS OMEGA 2021; 6:20341-20350. [PMID: 34395982 PMCID: PMC8358970 DOI: 10.1021/acsomega.1c02282] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Accepted: 07/15/2021] [Indexed: 06/13/2023]
Abstract
Binary clusters of transition-metal and noble-metal elements have been gathering momentum for not only advanced fundamental understanding but also potential as elementary blocks of novel nanostructured materials. In this regard, the geometries, electronic structures, stability, and magnetic properties of Cr-doped Cu n , Ag n , and Au n clusters (n = 2-20) have been systematically studied by means of density functional theory calculations. It is found that the structural evolutions of CrCu n and CrAg n clusters are identical. The icosahedral CrCu12 and CrAg12 are crucial sizes for doped copper and silver species. Small CrAu n clusters prefer the planar geometries, while the larger ones appear as on the way to establish the tetrahedral CrAu19. Our results show that while each noble atom contributes one s valence electron to the cluster shell, the number of chromium delocalized electrons is strongly size-dependent. The localization and delocalization behavior of 3d orbitals of the chromium decide how they participate in metallic bonding, stabilize the cluster, and give rise to and eventually quench the spin magnetic moment. Moreover, molecular orbital analysis in combination with a qualitative interpretation using the phenomenological shell model is applied to reveal the complex interplay between geometric structure, electronic structure, and magnetic moment of clusters. The finding results are expected to provide greater insight into how a host material electronic structure influences the geometry, stability, and formation of spin magnetic moments in doped systems.
Collapse
Affiliation(s)
- Nguyen Thi Mai
- Institute
of Materials Science and Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Hanoi 11307, Vietnam
| | - Ngo Thi Lan
- Institute
of Materials Science and Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Hanoi 11307, Vietnam
- Department
of Physics and Technology, Thai Nguyen University
of Science, Thai Nguyen 250000, Vietnam
| | - Ngo Tuan Cuong
- Center
for Computational Science, Hanoi National
University of Education, Hanoi 11310, Vietnam
| | - Nguyen Minh Tam
- Computational
Chemistry Research Group, Ton Duc Thang
University, Ho Chi
Minh City 72915, Vietnam
- Faculty
of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City 72915, Vietnam
| | - Son Tung Ngo
- Faculty
of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City 72915, Vietnam
- Laboratory
of Theoretical and Computational Biophysics, Ton Duc Thang University, Ho Chi
Minh City 72915, Vietnam
| | - Thu Thi Phung
- University
of Science and Technology of Hanoi, Vietnam
Academy of Science and Technology, Hanoi 11307, Vietnam
| | - Nguyen Van Dang
- Department
of Physics and Technology, Thai Nguyen University
of Science, Thai Nguyen 250000, Vietnam
| | - Nguyen Thanh Tung
- Institute
of Materials Science and Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Hanoi 11307, Vietnam
| |
Collapse
|
14
|
Nhat PV, Si NT, Duong LV, Nguyen MT. Comment on 'Structural characterization, reactivity and vibrational properties of silver clusters: a new global minimum for Ag 16' by P. L. Rodríguez-Kessler, A. R. Rodríguez-Domínguez, D. MacLeod Carey and A. Muñoz-Castro, Phys. Chem. Chem. Phys., 2020, 22, 27255, DOI: D0CP04018E. Phys Chem Chem Phys 2021; 23:12900-12903. [PMID: 34042917 DOI: 10.1039/d1cp00646k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
A recent paper by Rodríguez-Kessler et al., Phys. Chem. Chem. Phys., 2020, 22, 27255-27262, reported not only results of quantum chemical computations (using the PW91 density functional) on Ag16 clusters as emphasized in the article's title, but also on the Ag15 size. These authors confirmed previous results obtained by McKee and Samokhvalov (J. Phys. Chem. A, 2017, 121, 5018-5028 using the M06 density functional) that the most stable isomer of Ag15 is a C2v structure. We wish to point out that two low symmetry isomers of Ag15 that have a similar energy content are even lower in energy than their reported C2v global minimum. The relative energies between low-lying Ag15 isomers were again found to be method-dependent, and within the expected accuracy of DFT and CCSD(T) methods they could be considered as energetically degenerate, and likely coexist in a molecular beam. The new lower-energy Ag15 isomers appear to fit more consistently within the structural evolution of small silver clusters.
Collapse
Affiliation(s)
- Pham Vu Nhat
- Department of Chemistry, Can Tho University, Can Tho, Vietnam.
| | - Nguyen Thanh Si
- Department of Chemistry, Can Tho University, Can Tho, Vietnam.
| | - Long Van Duong
- Institute for Computational Science and Technology (ICST), Ho Chi Minh City, Vietnam.
| | - Minh Tho Nguyen
- Institute for Computational Science and Technology (ICST), Ho Chi Minh City, Vietnam.
| |
Collapse
|
15
|
Rodríguez-Kessler PL, Rodríguez-Domínguez AR, Muñoz-Castro A. Systematic cluster growth: a structure search method for transition metal clusters. Phys Chem Chem Phys 2021; 23:4935-4943. [DOI: 10.1039/d0cp06179d] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The systematic cluster growth (SCG) method is a biased structure search strategy based on a seeding process for investigating the structural evolution and growth pattern of transition metal clusters.
Collapse
Affiliation(s)
- Peter L. Rodríguez-Kessler
- Grupo de Química Inorgánica y Materiales Moleculares
- Facultad de Ingeniería
- Universidad Autónoma de Chile
- Santiago
- Chile
| | | | - Alvaro Muñoz-Castro
- Grupo de Química Inorgánica y Materiales Moleculares
- Facultad de Ingeniería
- Universidad Autónoma de Chile
- Santiago
- Chile
| |
Collapse
|
16
|
Jabed MA, Dandu N, Tretiak S, Kilina S. Passivating Nucleobases Bring Charge Transfer Character to Optically Active Transitions in Small Silver Nanoclusters. J Phys Chem A 2020; 124:8931-8942. [PMID: 33079551 DOI: 10.1021/acs.jpca.0c06974] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
DNA-wrapped silver nanoclusters (DNA-AgNCs) are known for their efficient luminescence. However, their emission is highly sensitive to the DNA sequence, the cluster size, and its charge state. To get better insights into photophysics of these hybrid systems, simulations based on density functional theory (DFT) are performed. Our calculations elucidate the effect of the structural conformations, charges, solvent polarity, and passivating bases on optical spectra of DNA-AgNCs containing five and six Ag atoms. It is found that inclusion of water in calculations as a polar solvent media results in stabilization of nonplanar conformations of base-passivated clusters, while their planar conformations are more stable in vacuum, similar to the bare Ag5 and Ag6 clusters. Cytosines and guanines interact with the cluster twice stronger than thymines, due to their larger dipole moments. In addition to the base-cluster interactions, hydrogen bonds between bases notably contribute to the structure stabilization. While the relative intensity, line width, and the energy of absorption peaks are slightly changing depending on the cluster charge, conformations, and base types, the overall spectral shape with five well-resolved bands at 2.5-5.5 eV is consistent for all structures. Independent of the passivating bases and the cluster size and charge, the low energy optical transitions at 2.5-3.5 eV exhibit a metal to ligand charge transfer (MLCT) character with the main contribution emerging from Ag-core to the bases. Cytosines facilitate the MLCT character to a larger degree comparing to the other bases. However, the doublet transitions in clusters with the open shell electronic structure (Ag5 and Ag6+) result in appearance of additional red-shifted (<2.5 eV) and optically weak band with negligible MLCT character. The passivated clusters with the closed shell electronic structure (Ag5+ and Ag6) exhibit higher optical intensity of their lowest transitions with much higher MLCT contribution, thus having better potential for emission, than their open shell counterparts.
Collapse
Affiliation(s)
- Mohammed A Jabed
- Department of Chemistry and Biochemistry, North Dakota State University, Fargo, North Dakota 58108, United States
| | - Naveen Dandu
- Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Sergei Tretiak
- Center for Nonlinear Studies, Center for Integrated Nanotechnologies, and Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Svetlana Kilina
- Department of Chemistry and Biochemistry, North Dakota State University, Fargo, North Dakota 58108, United States
| |
Collapse
|
17
|
Evangelisti B, Fichthorn KA, van Duin ACT. Development and initial applications of an e-ReaxFF description of Ag nanoclusters. J Chem Phys 2020; 153:104106. [DOI: 10.1063/5.0018971] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Benjamin Evangelisti
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Kristen A. Fichthorn
- Department of Chemical Engineering, Pennsylvania State University, University Park, Pennsylvania 16802, USA
- Department of Physics, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Adri C. T. van Duin
- Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802, USA
- Department of Chemical Engineering, Pennsylvania State University, University Park, Pennsylvania 16802, USA
- Department of Mechanical Engineering, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| |
Collapse
|
18
|
Affiliation(s)
- Jijun Zhao
- Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Dalian University of Technology), Ministry of Education, Dalian 116024, China
| | - Qiuying Du
- Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Dalian University of Technology), Ministry of Education, Dalian 116024, China
| | - Si Zhou
- Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Dalian University of Technology), Ministry of Education, Dalian 116024, China
| | - Vijay Kumar
- Center for Informatics, School of Natural Sciences, Shiv Nadar University, NH-91, Tehsil Dadri, Gautam Buddha Nagar 201314, U. P., India
- Dr. Vijay Kumar Foundation, 1969 Sector 4, Gurgaon 122001, Haryana, India
| |
Collapse
|
19
|
|
20
|
Li HS, Wei D, Zhao X, Ren X, Zhang D, Ju W. Thermal Stability of Ag 13- Clusters Studied by Ab Initio Molecular Dynamics Simulations. J Phys Chem A 2020; 124:4325-4332. [PMID: 32390419 DOI: 10.1021/acs.jpca.0c00277] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Identification of the geometric structures of silver clusters is of great importance in future nanotechnologies due to their superior properties. Nevertheless, some ground-state structures are still in academic debate, partly because the experiments and theoretical calculations are not performed at the same temperatures. For example, silver clusters usually have compact configurations. However, a combined experimental and theoretical study proposed that the most stable structure of Ag13- had a two-coordinated atom. By using the CALYPSO approach for the global minima search followed by first-principles calculations, we discovered that a more compact trilayer Ag13- cluster was the ground state, in accordance with another three works published recently. In addition, its O2 adsorption structure is also energetically favored. By tracing characteristic bond changes in ab initio molecular dynamics (MD) simulations, we confirmed that, compared with other isomers, this trilayer structure and its O2 adsorption structure also had the highest thermal stability. This work emphasized the thermal stability concept in theoretical calculations, which may be a necessary supplement to explain the experimental observations on cluster science.
Collapse
Affiliation(s)
- Hai-Sheng Li
- School of Physics and Engineering, Henan University of Science and Technology, Luoyang City 471023, Henan Province, China
| | - Donghui Wei
- College of Chemistry, Zhengzhou University, Zhengzhou 450001, Henan Province, P. R. China
| | - Xingju Zhao
- Department of Physics, Beijing Normal University, Beijing 100875, P.R. China
| | - Xiaoyan Ren
- International Laboratory for Quantum Functional Materials of Henan, School of Physics and Engineering, Zhengzhou University, Zhengzhou 450001, China
| | - Dawei Zhang
- School of Physics and Engineering, Henan University of Science and Technology, Luoyang City 471023, Henan Province, China
| | - Weiwei Ju
- School of Physics and Engineering, Henan University of Science and Technology, Luoyang City 471023, Henan Province, China
| |
Collapse
|
21
|
Rodríguez-Kessler PL, Rodríguez-Domínguez AR, MacLeod Carey D, Muñoz-Castro A. Structural characterization, reactivity, and vibrational properties of silver clusters: a new global minimum for Ag16. Phys Chem Chem Phys 2020; 22:27255-27262. [DOI: 10.1039/d0cp04018e] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
In the present work, the lowest energy structures and electronic properties of Agn clusters up to n = 16 are investigated using a successive growth algorithm coupled with density functional theory calculations (DFT).
Collapse
Affiliation(s)
- Peter L. Rodríguez-Kessler
- Grupo de Química Inorgánica y Materiales Moleculares, Facultad de Ingeniería, Universidad Autónoma de Chile, El Llano Subercaseaux 2810, Santiago, Chile
| | | | - Desmond MacLeod Carey
- Grupo de Química Inorgánica y Materiales Moleculares, Facultad de Ingeniería, Universidad Autónoma de Chile, El Llano Subercaseaux 2810, Santiago, Chile
| | - Alvaro Muñoz-Castro
- Grupo de Química Inorgánica y Materiales Moleculares, Facultad de Ingeniería, Universidad Autónoma de Chile, El Llano Subercaseaux 2810, Santiago, Chile
| |
Collapse
|
22
|
Abstract
The lowest-energy geometrical and electronic structures of Cu38 cluster are investigated by density-functional calculations combined with a genetic algorithm based on a many body semi-empirical interatomic potential, the traditional FCC-truncated Octahedron (OH) and an incomplete-Mackay icosahedron (IMI) are recognized as the two lowest energy structures (energetically degenerate isomers) but with different electronic structures: a semiconductor-type with the energy-gap of 0.356 eV for the IMI and a metallic-type with negligible gap for the OH, which is in good agreement with the experimental results. The electron affinity and ionization potential of Cu38 are also discussed and compared with the observations of the ultraviolet photoelectron spectroscopy experiments. The dynamical isomerization of the OH-like and IMI-like structures of Cu38 is revealed to dominate the pre-melting stage through the investigation by the molecular dynamics annealing simulations.
Collapse
|
23
|
Takagi N, Ishimura K, Miura H, Shishido T, Fukuda R, Ehara M, Sakaki S. Catalysis of Cu Cluster for NO Reduction by CO: Theoretical Insight into the Reaction Mechanism. ACS OMEGA 2019; 4:2596-2609. [PMID: 31459495 PMCID: PMC6648525 DOI: 10.1021/acsomega.8b02890] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2018] [Accepted: 01/10/2019] [Indexed: 06/10/2023]
Abstract
Density functional theory calculations here elucidated that Cu38-catalyzed NO reduction by CO occurred not through NO dissociative adsorption but through NO dimerization. NO is adsorbed to two Cu atoms in a bridging manner. NO adsorption energy is much larger than that of CO. N-O bond cleavage of the adsorbed NO molecule needs a very large activation energy (ΔG°‡). On the other hand, dimerization of two NO molecules occurs on the Cu38 surface with small ΔG°‡ and very negative Gibbs reaction energy (ΔG°) to form ONNO species adsorbed to Cu38. Then, a CO molecule is adsorbed at the neighboring position to the ONNO species and reacts with the ONNO to induce N-O bond cleavage with small ΔG°‡ and very negative ΔG°, leading to the formation of N2O adsorbed on Cu38 and CO2 molecule in the gas phase. N2O dissociates from Cu38, and then it is readsorbed to Cu38 in the most stable adsorption structure. N-O bond cleavage of N2O easily occurs with small ΔG°‡ and significantly negative ΔG° to form the N2 molecule and the O atom adsorbed on Cu38. The O atom reacts with the CO molecule to afford CO2 and regenerate Cu38, which is rate-determining. N2O species was experimentally observed in Cu/γ-Al2O3-catalyzed NO reduction by CO, which is consistent with this reaction mechanism. This mechanism differs from that proposed for the Rh catalyst, which occurs via N-O bond cleavage of the NO molecule. Electronic processes in the NO dimerization and the CO oxidation with the O atom adsorbed to Cu38 are discussed in terms of the charge-transfer interaction with Cu38 and Frontier orbital energy of Cu38.
Collapse
Affiliation(s)
- Nozomi Takagi
- Elements
Strategy Initiative for Catalysts and Batteries, Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto 615-8245, Japan
| | | | - Hiroki Miura
- Elements
Strategy Initiative for Catalysts and Batteries, Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto 615-8245, Japan
- Department
of Applied Chemistry, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1, Minami-osawa, Hachioji, Tokyo 192-0397, Japan
| | - Tetsuya Shishido
- Elements
Strategy Initiative for Catalysts and Batteries, Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto 615-8245, Japan
- Department
of Applied Chemistry, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1, Minami-osawa, Hachioji, Tokyo 192-0397, Japan
| | - Ryoichi Fukuda
- Elements
Strategy Initiative for Catalysts and Batteries, Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto 615-8245, Japan
| | - Masahiro Ehara
- Elements
Strategy Initiative for Catalysts and Batteries, Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto 615-8245, Japan
- Institute
for Molecular Science, Okazaki 444-8585, Japan
| | - Shigeyoshi Sakaki
- Elements
Strategy Initiative for Catalysts and Batteries, Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto 615-8245, Japan
- Fukui
Institute for Fundamental Chemistry, Kyoto
University, 34-4 Takano-Nishihiraki-cho, Sakyo-ku, Kyoto 606-8103, Japan
| |
Collapse
|
24
|
Iwasa T, Sato T, Takagi M, Gao M, Lyalin A, Kobayashi M, Shimizu KI, Maeda S, Taketsugu T. Combined Automated Reaction Pathway Searches and Sparse Modeling Analysis for Catalytic Properties of Lowest Energy Twins of Cu 13. J Phys Chem A 2019; 123:210-217. [PMID: 30540470 DOI: 10.1021/acs.jpca.8b08868] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In nanocatalysis, growing attention has recently been given to investigation of energetically low-lying structural isomers of atomic clusters, because some isomers can demonstrate better catalytic activity than the most stable structures. In this study, we present a comparative investigation of catalytic activity for NO dissociation of a pair of the energetically degenerated isomers of Cu13 cluster having C2 and C s symmetries. It is shown that although these isomers have similar structural, electronic, and optical properties, they can possess very different catalytic activities. The effect of isomerization between cluster isomers is considered using state-of-the-art automated reaction pathway search techniques such as an artificial force induced reaction (AFIR) method as a part of a global reaction route mapping (GRRM) strategy. This method allows effectively to locate a large number of possible reaction pathways and transition states (TSs). In total, 12 TSs for NO dissociation were obtained for Cu13, of C2, C s, as well as I h isomers. Sparse modeling analysis shows that LUMO is strongly negatively correlated with total energy of TSs. For most TSs, LUMO has the antibonding character of NO, consisting of the interaction between π* of NO and SOMO of Cu13. Therefore, an increase in the strength of interaction between NO molecule and Cu13 cluster causes the rise in energy of the LUMO, resulting in lowering of the TS energy for NO dissociation. The combination of the automated reaction pathway search technique and sparse modeling represents a powerful tool for analysis and prediction of the physicochemical properties of atomic clusters, especially in the regime of structural fluxionality, where traditional methods based on random geometry search analyses are difficult.
Collapse
Affiliation(s)
- Takeshi Iwasa
- Department of Chemistry, Faculty of Science , Hokkaido University , Sapporo 060-0810 , Japan.,Graduate School of Chemical Sciences and Engineering , Hokkaido University , Sapporo 060-0810 , Japan.,ESICB , Kyoto University , Kyoto 615-8245 , Japan
| | - Takaaki Sato
- Graduate School of Chemical Sciences and Engineering , Hokkaido University , Sapporo 060-0810 , Japan
| | - Makito Takagi
- Graduate School of Chemical Sciences and Engineering , Hokkaido University , Sapporo 060-0810 , Japan
| | - Min Gao
- Graduate School of Chemical Sciences and Engineering , Hokkaido University , Sapporo 060-0810 , Japan.,ESICB , Kyoto University , Kyoto 615-8245 , Japan.,Institute for Catalysis , Hokkaido University , Sapporo 001-0021 , Japan
| | - Andrey Lyalin
- GREEN , National Institute for Materials Science , Tsukuba 305-0044 , Japan
| | - Masato Kobayashi
- Department of Chemistry, Faculty of Science , Hokkaido University , Sapporo 060-0810 , Japan.,Graduate School of Chemical Sciences and Engineering , Hokkaido University , Sapporo 060-0810 , Japan.,ESICB , Kyoto University , Kyoto 615-8245 , Japan.,PRESTO , Japan Science and Technology Agency , Kawaguchi 332-0012 , Japan
| | - Ken-Ichi Shimizu
- ESICB , Kyoto University , Kyoto 615-8245 , Japan.,Institute for Catalysis , Hokkaido University , Sapporo 001-0021 , Japan
| | - Satoshi Maeda
- Department of Chemistry, Faculty of Science , Hokkaido University , Sapporo 060-0810 , Japan.,Graduate School of Chemical Sciences and Engineering , Hokkaido University , Sapporo 060-0810 , Japan.,ESICB , Kyoto University , Kyoto 615-8245 , Japan.,Institute for Chemical Reaction Design and Discovery (WPI-ICReDD) , Hokkaido University , Sapporo 001-0021 , Japan
| | - Tetsuya Taketsugu
- Department of Chemistry, Faculty of Science , Hokkaido University , Sapporo 060-0810 , Japan.,Graduate School of Chemical Sciences and Engineering , Hokkaido University , Sapporo 060-0810 , Japan.,ESICB , Kyoto University , Kyoto 615-8245 , Japan.,GREEN , National Institute for Materials Science , Tsukuba 305-0044 , Japan.,Institute for Chemical Reaction Design and Discovery (WPI-ICReDD) , Hokkaido University , Sapporo 001-0021 , Japan
| |
Collapse
|
25
|
Fernández E, Boronat M. Sub nanometer clusters in catalysis. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2019; 31:013002. [PMID: 30499451 DOI: 10.1088/1361-648x/aaed84] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Sub nanometer transition metal clusters composed of a small number of atoms exhibit unexpected electronic, optical, magnetic and catalytic properties that often change substantially as a function of cluster atomicity. Several factors influence their unique catalytic behavior, including their discrete electronic structure of molecular-like orbitals and the accessibility of their low-coordinated atoms. In addition, these factors are strongly correlated so that changes in their morphology may provoke large modifications to their electronic structure and vice versa. The thermodynamic instability of clusters makes it necessary to stabilize them with protective ligands in solution or to support them on solid matrices for practical applications, which introduces non-negligible modifications into their properties. Understanding their cause and extent is the key point to potentially achieve a fine tuning of their catalytic behavior. Selected examples are discussed illustrating important points on this matter, such as the influence of cluster morphology on reactivity, the need of anchoring clusters to avoid sintering and deactivation, and the possible formation of clusters in solution or under reaction conditions, with the associated difficulty to identify them as the true active species.
Collapse
Affiliation(s)
- Estefanía Fernández
- Instituto de Tecnología Química (UPV-CSIC), Universitat Politècnica de València-Consejo Superior de Investigaciones Científicas, Avda. de los Naranjos s/n, 46022 Valencia, Spain
| | | |
Collapse
|
26
|
Takagi N, Nakagaki M, Ishimura K, Fukuda R, Ehara M, Sakaki S. Electronic processes in NO dimerization on Ag and Cu clusters: DFT and MRMP2 studies. J Comput Chem 2019; 40:181-190. [PMID: 30378149 DOI: 10.1002/jcc.25568] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Revised: 07/30/2018] [Accepted: 07/31/2018] [Indexed: 11/10/2022]
Abstract
Experimentally observed NO dimerization on Cu and Ag surfaces is surprising because binding energy of NO dimer is very small in gas phase. MRMP2, MP2 to MP4, CCSD(T), and DFT studies of NO dimerization on Ag2 and Cu2 clusters disclosed that the CCSD(T) method could be applied to this reaction on Ag2 and Cu2 unlike NO dimerization in gas phase which exhibits significantly large nondynamical electron correlation effect. Charge-transfer (CT) from Ag2 and Cu2 to NO moieties plays important role in NN bond formation between two NO molecules. This CT considerably decreases nondynamical correlation effect. Also, the DFT method could be applied to this NO dimerization, if appropriate DFT functional is used; all pure functionals examined here and most of the hybrid functionals underestimated the activation barrier (Ea ), while only ωB97X provided Ea similar to CCSD(T)-calculated value. NO dimerization on similar Cu2 and Cu5 needs moderately larger Ea than those on Ag2 and Ag5 , because frontier orbital participating in the CT exists at lower energy in Cu2 and Cu5 than in Ag2 and Ag5 . The Ea decreases in the order Ag2 >> Ag38 > Ag7 ∼ Ag5 and the reaction energy (ΔE) is positive (endothermic) in Ag2 but significantly negative in Ag38 , Ag7 , and Ag5 , indicating that various Ag clusters could be effective for NO dimerization except for Ag2 . The decreasing order of Ea and increasing order of exothermicity are attributed to increasing order of the frontier orbital energy of Ag2 < Ag38 < Ag7 ∼ Ag5 . © 2018 Wiley Periodicals, Inc.
Collapse
Affiliation(s)
- Nozomi Takagi
- Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto, 615-8245, Japan
| | - Masayuki Nakagaki
- Fukui Institute for Fundamental Chemistry (FIFC), Kyoto University, 34-4 Takano-Nishihiraki-cho, Sakyo-ku, Kyoto, 606-8103, Japan
| | - Kazuya Ishimura
- Institute for Molecular Science (IMS), Okazaki, 444-8585, Japan
| | - Ryoichi Fukuda
- Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto, 615-8245, Japan
| | - Masahiro Ehara
- Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto, 615-8245, Japan.,Institute for Molecular Science (IMS), Okazaki, 444-8585, Japan
| | - Shigeyoshi Sakaki
- Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, 1-30 Goryo-Ohara, Nishikyo-ku, Kyoto, 615-8245, Japan.,Fukui Institute for Fundamental Chemistry (FIFC), Kyoto University, 34-4 Takano-Nishihiraki-cho, Sakyo-ku, Kyoto, 606-8103, Japan
| |
Collapse
|
27
|
He XW, Li H, Du HN, Wang J, Zhang HX, Xu CX. The stability of Cu clusters and their adsorption for CH 4 and CH 3 by first principle calculations. J Chem Phys 2018; 149:204310. [PMID: 30501263 DOI: 10.1063/1.5055784] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Two-dimensional (2D) and three-dimensional (3D) Cu n clusters (n indicates the atom number) and their adsorption behaviors for both methane (CH4) and methyl (CH3) are studied in this work using the density functional theory method, where n ranges from 6 to 20. In these small clusters, it is found that the CH4 molecule is always adsorbed on the top site with the adsorption energy between -0.05 eV and -0.21 eV. Considering methane dehydrogenation, stronger adsorption for CH4 is required, so 2D clusters with n = 7, 14, 15, and 16 and 3D clusters with n = 6, 10, 12, and 17 are found to have relatively stronger adsorption. However, for the adsorption of CH3, there is an obvious even-odd oscillation change in the size of 3D clusters, while it is not clear in 2D clusters since one cannot find an even-odd change as n > 14. The weaker adsorption for CH3 occurs on 3D clusters when n is even except 6 and also on 2D clusters when n = 6, 7, 10, and 12 with higher carbon poisoning resistance. Based on these calculated results, some Cu clusters which show good potential ability for methane dehydrogenation are provided, especially when n = 10 and 12 for 3D structures, and n = 7 for the 2D ones.
Collapse
Affiliation(s)
- X W He
- College of Materials Science and Engineering, Taiyuan University of Technology, Taiyuan 030024, China
| | - H Li
- College of Materials Science and Engineering, Taiyuan University of Technology, Taiyuan 030024, China
| | - H N Du
- College of Materials Science and Engineering, Taiyuan University of Technology, Taiyuan 030024, China
| | - J Wang
- College of Materials Science and Engineering, Taiyuan University of Technology, Taiyuan 030024, China
| | - H X Zhang
- College of Materials Science and Engineering, Taiyuan University of Technology, Taiyuan 030024, China
| | - C X Xu
- College of Materials Science and Engineering, Taiyuan University of Technology, Taiyuan 030024, China
| |
Collapse
|
28
|
Structural stability of binary
$$\hbox {Pd}_{34-n}\hbox {M}_{n}$$
Pd
34
-
n
M
n
(
$$\hbox {M}=\hbox {Cu}$$
M
=
Cu
, Ag, Au) clusters. Theor Chem Acc 2018. [DOI: 10.1007/s00214-018-2268-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
|
29
|
First-principles study of copper nanoclusters for enhanced electrochemical CO 2 reduction to CH 4. COMPUT THEOR CHEM 2017. [DOI: 10.1016/j.comptc.2017.10.001] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
|
30
|
σ-Holes on Transition Metal Nanoclusters and Their Influence on the Local Lewis Acidity. CRYSTALS 2017. [DOI: 10.3390/cryst7070222] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
|
31
|
Sun WG, Wang JJ, Lu C, Xia XX, Kuang XY, Hermann A. Evolution of the Structural and Electronic Properties of Medium-Sized Sodium Clusters: A Honeycomb-Like Na 20 Cluster. Inorg Chem 2017; 56:1241-1248. [PMID: 28105808 DOI: 10.1021/acs.inorgchem.6b02340] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Sodium is one of the best examples of a free-electron-like metal and of a certain technological interest. However, an unambiguous determination of the structural evolution of sodium clusters is challenging. Here, we performed an unbiased structure search among neutral and anionic sodium clusters in the medium size range of 10-25 atoms, using the Crystal structure AnaLYsis by Particle Swarm Optimization (CALYPSO) method. Geometries are determined by CALYPSO structure searches, followed by reoptimization of a large number of candidate structures. For most cluster sizes the simulated photoelectron spectra of the lowest-energy structures are in excellent agreement with the experimental data, indicating that the current ground-state structures are the true minima. The equilibrium geometries show that, for both neutral and anionic species, the structural evolution from bilayer structures to layered outsides with interior atoms occurs at n = 16. A novel unprecedented honeycomb-like structure of Na20 cluster with C3 symmetry is uncovered, which is more stable than the prior suggested structure based on pentagonal structural motifs.
Collapse
Affiliation(s)
- Wei Guo Sun
- Institute of Atomic and Molecular Physics, Sichuan University , Chengdu 610065, China.,Department of Physics, Nanyang Normal University , Nanyang 473061, China
| | - Jing Jing Wang
- Institute of Atomic and Molecular Physics, Sichuan University , Chengdu 610065, China.,Education College of Information Technology, Hubei Nomal University , Huangshi 435002, China
| | - Cheng Lu
- Department of Physics, Nanyang Normal University , Nanyang 473061, China.,Department of Physics and High Pressure Science and Engineering Center, University of Nevada , Las Vegas, Nevada 89154, United States
| | - Xin Xin Xia
- Institute of Atomic and Molecular Physics, Sichuan University , Chengdu 610065, China
| | - Xiao Yu Kuang
- Institute of Atomic and Molecular Physics, Sichuan University , Chengdu 610065, China
| | - Andreas Hermann
- Centre for Science at Extreme Conditions and SUPA, School of Physics and Astronomy, The University of Edinburgh , Edinburgh EH9 3JZ, United Kingdom
| |
Collapse
|
32
|
Pham HT, Cuong NT, Tam NM, Tung NT. A Systematic Investigation on CrCun Clusters with n = 9-16: Noble Gas and Tunable Magnetic Property. J Phys Chem A 2016; 120:7335-43. [PMID: 27556591 DOI: 10.1021/acs.jpca.6b04221] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
A systematic investigation on structure, dissociation behavior, chemical bonding, and magnetic property of Cr-doped Cun clusters (n = 9-16) is carried out using the mean of density functional theory calculations. It is found that CrCu12 is a crucial size, preferring an icosahedral Cu12 cage with the central Cr dopant. Smaller cluster sizes appear as on the way to form the CrCu12 icosahedron while larger ones are produced by attaching additional Cu atoms to the CrCu12 core. The presence of Cr dopant obviously enhances the stability of CrCun clusters in comparison to that of pure counterparts. Exceptionally stable CrCu12 has an 18-electron closed-shell electronic structure, mimicking a noble gas in the viewpoint of superatom concept. Analysis on cluster electronic structure shows that the interplay between 3d orbitals of Cr and 4s orbitals of Cu has a vital role on the magnetic properties of CrCun clusters.
Collapse
Affiliation(s)
- Hung Tan Pham
- Institute for Computational Science and Technology , Ho Chi Minh City, Vietnam
| | - Ngo Tuan Cuong
- Center for Computational Science, Hanoi National University of Education , Hanoi, Vietnam
| | - Nguyen Minh Tam
- Computational Chemistry Research Group & Faculty of Applied Sciences, Ton Duc Thang University , Ho Chi Minh City, Vietnam
| | - Nguyen Thanh Tung
- Institute of Materials Science, Vietnam Academy of Science and Technology , Hanoi, Vietnam
| |
Collapse
|
33
|
Song W, Wang B, Guo K, Zhang W. Structures and magnetic properties of Ni n (n = 36-40) clusters from first-principles calculations. J STRUCT CHEM+ 2016. [DOI: 10.1134/s0022476616050048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
|
34
|
Fernando A, Weerawardene KLDM, Karimova NV, Aikens CM. Quantum Mechanical Studies of Large Metal, Metal Oxide, and Metal Chalcogenide Nanoparticles and Clusters. Chem Rev 2015; 115:6112-216. [PMID: 25898274 DOI: 10.1021/cr500506r] [Citation(s) in RCA: 217] [Impact Index Per Article: 24.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Amendra Fernando
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506, United States
| | | | - Natalia V Karimova
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506, United States
| | - Christine M Aikens
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506, United States
| |
Collapse
|
35
|
Madison LR, Ratner MA, Schatz GC. Understanding the Electronic Structure Properties of Bare Silver Clusters as Models for Plasmonic Excitation. ACTA ACUST UNITED AC 2015. [DOI: 10.1007/978-3-319-14397-2_3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
|
36
|
Anak B, Bencharif M, Rabilloud F. Time-dependent density functional study of UV-visible absorption spectra of small noble metal clusters (Cun, Agn, Aun, n = 2–9, 20). RSC Adv 2014. [DOI: 10.1039/c3ra47244b] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
|
37
|
Calaminici P, Pérez-Romero M, Vásquez-Pérez JM, Köster AM. On the ground state structure of neutral Cun (n=12,14,16,18,20) clusters. COMPUT THEOR CHEM 2013. [DOI: 10.1016/j.comptc.2013.06.014] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
38
|
Aguado A. Structures, relative stabilities, and electronic properties of potassium clusters Kn (13⩽n⩽80). COMPUT THEOR CHEM 2013. [DOI: 10.1016/j.comptc.2013.06.040] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
39
|
Chen M, Dyer JE, Li K, Dixon DA. Prediction of Structures and Atomization Energies of Small Silver Clusters, (Ag)n, n < 100. J Phys Chem A 2013; 117:8298-313. [DOI: 10.1021/jp404493w] [Citation(s) in RCA: 95] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Mingyang Chen
- Department of Chemistry, The University of Alabama, Shelby Hall, Tuscaloosa, Alabama 35487-0336,
United States
| | - Jason E. Dyer
- Department of Chemistry, The University of Alabama, Shelby Hall, Tuscaloosa, Alabama 35487-0336,
United States
| | - Keijing Li
- Department of Chemistry, The University of Alabama, Shelby Hall, Tuscaloosa, Alabama 35487-0336,
United States
| | - David A. Dixon
- Department of Chemistry, The University of Alabama, Shelby Hall, Tuscaloosa, Alabama 35487-0336,
United States
| |
Collapse
|
40
|
Zhao YR, Zhang HR, Zhang MG, Zheng BB, Kuang XY. DFT study of size-dependent geometries, stabilities and electronic properties of Si2Agnclusters: comparison with pure silver clusters. Mol Phys 2013. [DOI: 10.1080/00268976.2013.819451] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
41
|
Gamboa GU, Reber AC, Khanna SN. Electronic subshell splitting controls the atomic structure of charged and neutral silver clusters. NEW J CHEM 2013. [DOI: 10.1039/c3nj01075a] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
|
42
|
Melko JJ, Castleman AW. Photoelectron imaging of small aluminum clusters: quantifying s–p hybridization. Phys Chem Chem Phys 2013; 15:3173-8. [PMID: 23340689 DOI: 10.1039/c3cp43158d] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Affiliation(s)
- Joshua J Melko
- Departments of Chemistry, The Pennsylvania State University, University Park, PA 16802, USA
| | | |
Collapse
|
43
|
ZHANG WEI, YAN SHUYAO, ZHAO ZENGXIA, ZHANG HONGXING. STABILITIES AND FRAGMENTATION BEHAVIORS OF Agn CLUSTERS (n = 2–34). JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2012. [DOI: 10.1142/s0219633612500642] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
A global search on the lowest-energy structures of the medium-sized silver clusters Ag n(n = 21–34) was performed by using a genetic algorithm (GA) coupled with a tight-binding (TB) method. Structures, binding energies per atom, second differences in energies, the energy gaps between the highest occupied molecular orbital and the lowest unoccupied molecular orbital (HOMO–LUMO), and fragmentation behaviors of Ag n(n = 21–34) are investigated by using DFT method. The calculated results show that the neutral silver clusters prefer to decay by evaporation of a monomer except a small sized silver cluster ( Ag 4), which favors a dimmer evaporation. For the collision induced dissociation of cationic silver clusters, decaying a silver atom is found to be the dominant fragmentation channel. But for some small sized cationic silver clusters, a neutral dimmer evaporation is found to be energetically favorable. Our calculated results are consistent with previous studies.
Collapse
Affiliation(s)
- WEI ZHANG
- State Key Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, Jilin University, Changchun, Jilin 130021, P. R. China
| | - SHU-YAO YAN
- State Key Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, Jilin University, Changchun, Jilin 130021, P. R. China
| | - ZENG-XIA ZHAO
- State Key Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, Jilin University, Changchun, Jilin 130021, P. R. China
| | - HONG-XING ZHANG
- State Key Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, Jilin University, Changchun, Jilin 130021, P. R. China
| |
Collapse
|
44
|
Hirabayashi S, Ichihashi M, Kawazoe Y, Kondow T. Comparison of Adsorption Probabilities of O2 and CO on Copper Cluster Cations and Anions. J Phys Chem A 2012; 116:8799-806. [DOI: 10.1021/jp304214m] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Shinichi Hirabayashi
- East
Tokyo Laboratory, Genesis Research Institute, Inc., 717-86 Futamata, Ichikawa, Chiba 272-0001,
Japan
| | - Masahiko Ichihashi
- Cluster Research
Laboratory, Toyota Technological Institute:
in East Tokyo Laboratory, Genesis Research Institute, Inc., 717-86 Futamata, Ichikawa, Chiba 272-0001, Japan
| | - Yoshiyuki Kawazoe
- Institute
for Materials Research, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai 980-8577,
Japan
| | - Tamotsu Kondow
- Cluster Research Laboratory, Toyota Technological Institute:
in East Tokyo Laboratory, Genesis Research Institute, Inc., 717-86 Futamata, Ichikawa, Chiba 272-0001, Japan
| |
Collapse
|
45
|
Jiang M, Zeng Q, Zhang T, Yang M, Jackson KA. Icosahedral to double-icosahedral shape transition of copper clusters. J Chem Phys 2012; 136:104501. [PMID: 22423842 DOI: 10.1063/1.3689442] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
The lowest-energy isomers of Cu(N) clusters for N = 20-30 are identified using an unbiased search algorithm and density functional theory calculations. The low-energy structures over this size range are dominated by those based on a 13-atom icosahedral (I(h)) core and a 19-atom double icosahedron (DI(h)) core. A transition in the ground-state isomers from I(h)-based to DI(h)-based structures is predicted overt N = 21-23. We discuss this transition in the broader context of the growth pattern for Cu(N) over N = 2-30 that features regions of gradual evolution in which atoms successively add to the cluster surface, separated by sudden changes to a different structural organization and more compact shape. These transitions result from a competition between interatomic bonding energy and surface energy. The implications of this growth pattern for the further evolution of copper from microstructure to bulk are discussed.
Collapse
Affiliation(s)
- Minglong Jiang
- Institute of Atomic and Molecular Physics, Sichuan University, Chengdu 610065, People's Republic of China
| | | | | | | | | |
Collapse
|
46
|
|
47
|
Bulusu S, Fournier R. Density functional theory guided Monte Carlo simulations: Application to melting of Na13. J Chem Phys 2012; 136:064112. [DOI: 10.1063/1.3684628] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
|
48
|
|
49
|
Ghazi SM, De S, Kanhere DG, Goedecker S. Density functional investigations on structural and electronic properties of anionic and neutral sodium clusters Na(N) (N = 40-147): comparison with the experimental photoelectron spectra. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2011; 23:405303. [PMID: 21937791 DOI: 10.1088/0953-8984/23/40/405303] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Density functional calculations have been carried out to obtain low energy equilibrium geometries of anionic and neutral sodium clusters over a wide range of sizes 40 ≤ N ≤ 147, where N is the number of atoms. An exhaustive search for the low energy equilibrium geometries has been carried out. The density of states of the lowest energy geometries are compared with the experimental photoelectron spectra (Huber et al 2009 Phys. Rev. B 80 235425; Kostko et al 2007 Phys. Rev. Lett.98 043401) for N > 41. The agreement between theory and experiment is good for almost all the clusters and the changes in the spectrum with size correlate very well with the changes in the shapes as observed in the evolutionary trend of the ground state geometries.
Collapse
Affiliation(s)
- Seyed Mohammad Ghazi
- Department of Physics and Center for Modeling and Simulation, University of Pune, Ganeshkhind, Pune 411 007, India
| | | | | | | |
Collapse
|
50
|
Yuan X, Liu L, Wang X, Yang M, Jackson KA, Jellinek J. Theoretical Investigation of Adsorption of Molecular Oxygen on Small Copper Clusters. J Phys Chem A 2011; 115:8705-12. [DOI: 10.1021/jp200125t] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Xiuxiang Yuan
- Institute of Atomic and Molecular Physics, Sichuan University, Chengdu 610065, China
| | - Liuxia Liu
- Institute of Atomic and Molecular Physics, Sichuan University, Chengdu 610065, China
| | - Xin Wang
- Institute of Atomic and Molecular Physics, Sichuan University, Chengdu 610065, China
| | - Mingli Yang
- Institute of Atomic and Molecular Physics, Sichuan University, Chengdu 610065, China
| | - Koblar Alan Jackson
- Department of Physics, Central Michigan University, Mt. Pleasant, Michigan 48859, United States
| | - Julius Jellinek
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439, United States
| |
Collapse
|