1
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Chen J, Hu J, Kapral R. Chemical Logic Gates on Active Colloids. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2305695. [PMID: 38450886 PMCID: PMC11095161 DOI: 10.1002/advs.202305695] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Revised: 12/28/2023] [Indexed: 03/08/2024]
Abstract
Recent studies have shown that active colloidal motors using enzymatic reactions for propulsion hold special promise for applications in fields ranging from biology to material science. It will be desirable to have active colloids with capability of computation so that they can act autonomously to sense their surroundings and alter their own dynamics. It is shown how small chemical networks that make use of enzymatic chemical reactions on the colloid surface can be used to construct motor-based chemical logic gates. The basic features of coupled enzymatic reactions that are responsible for propulsion and underlie the construction and function of chemical gates are described using continuum theory and molecular simulation. Examples are given that show how colloids with specific chemical logic gates, can perform simple sensing tasks. Due to the diverse functions of different enzyme gates, operating alone or in circuits, the work presented here supports the suggestion that synthetic motors using such gates could be designed to operate in an autonomous way in order to complete complicated tasks.
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Affiliation(s)
- Jiang‐Xing Chen
- Department of PhysicsHangzhou Normal UniversityHangzhou311121China
| | - Jia‐Qi Hu
- Department of PhysicsHangzhou Normal UniversityHangzhou311121China
| | - Raymond Kapral
- Chemical Physics Theory GroupDepartment of ChemistryUniversity of TorontoTorontoOntarioM5S 3H6Canada
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2
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Illien P, Golestanian R. Chemotactic particles as strong electrolytes: Debye-Hückel approximation and effective mobility law. J Chem Phys 2024; 160:154901. [PMID: 38624127 DOI: 10.1063/5.0203593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Accepted: 03/28/2024] [Indexed: 04/17/2024] Open
Abstract
We consider a binary mixture of chemically active particles that produce or consume solute molecules and that interact with each other through the long-range concentration fields they generate. We analytically calculate the effective phoretic mobility of these particles when the mixture is submitted to a constant, external concentration gradient, at leading order in the overall concentration. Relying on an analogy with the modeling of strong electrolytes, we show that the effective phoretic mobility decays with the square root of the concentration: our result is, therefore, a nonequilibrium counterpart to the celebrated Kohlrausch and Debye-Hückel-Onsager conductivity laws for electrolytes, which are extended here to particles with long-range nonreciprocal interactions. The effective mobility law we derive reveals the existence of a regime of maximal mobility and could find applications in the description of nanoscale transport phenomena in living cells.
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Affiliation(s)
- Pierre Illien
- Laboratoire PHENIX (Physico-Chimie des Électrolytes et Nanosystèmes Interfaciaux), CNRS, Sorbonne Université, 4 Place Jussieu, 75005 Paris, France
| | - Ramin Golestanian
- Department of Living Matter Physics, Max Planck Institute for Dynamics and Self-Organization, D-37077 Göttingen, Germany
- Rudolf Peierls Centre for Theoretical Physics, University of Oxford, OX1 3PU Oxford, United Kingdom
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3
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Khatri N, Kapral R. Clustering of chemically propelled nanomotors in chemically active environments. CHAOS (WOODBURY, N.Y.) 2024; 34:033103. [PMID: 38427933 DOI: 10.1063/5.0188624] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 02/05/2024] [Indexed: 03/03/2024]
Abstract
Synthetic nanomotors powered by chemical reactions have been designed to act as vehicles for active cargo transport, drug delivery, and a variety of other uses. Collections of such motors, acting in consort, can self-assemble to form swarms or clusters, providing opportunities for applications on various length scales. While such collective behavior has been studied when the motors move in a chemically inactive fluid environment, when the medium in which they move is a chemical network that supports complex spatial and temporal patterns, through simulation and theoretical analysis we show that collective behavior changes. Spatial patterns in the environment can guide and control motor collective states, and interactions of the motors with their environment can give rise to distinctive spatiotemporal motor patterns. The results are illustrated by studies of the motor dynamics in systems that support Turing patterns and spiral waves. This work is relevant for potential applications that involve many active nanomotors moving in complex chemical or biological environments.
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Affiliation(s)
- Narender Khatri
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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4
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Shen YF, Hu HX, Luo MB. Adsorption of active polymers on attractive nanoparticles. SOFT MATTER 2024; 20:621-628. [PMID: 38131641 DOI: 10.1039/d3sm01380d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2023]
Abstract
The adsorption of active polymers on an attractive nanoparticle (NP) is studied using Langevin dynamics simulations. The active polymers consist of an active Brownian particle (ABP) at the head and a subsequent passive polymer chain. The ABP experiences an active force of magnitude Fa. The interactions between the active polymer and NP are modeled as Lennard-Jones potential with a strength εpn. We find the critical adsorption point εpn* increases with increasing the active force Fa. The increment of εpn*, denoted as Δεpn*, due to Fa can be expressed approximately as Δεpn* ∝ Fa2.5 for the restricted rotating active polymer (RRAP) where the rotation of the head ABP is restricted and Δεpn* ∝ Fa1.7 for the freely rotating active polymer (FRAP) where the ABP rotates freely. Meanwhile, the conformation of the adsorbed polymer, such as adsorbed trains on NP and the tail near the ABP, are also dependent on Fa. When the tail near the ABP is short, the adsorption is significantly affected by the active force. However, when the tail is long, the whole polymer can be viewed as a long tail stretched by the active force and unperturbed adsorption monomers. Simulation results show that the active force has a direct and significant effect on εpn* and the structure of the adsorbed active polymers.
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Affiliation(s)
- Yi-Fan Shen
- School of Physics, Zhejiang University, Hangzhou 310027, China.
| | - Han-Xian Hu
- School of Physics, Zhejiang University, Hangzhou 310027, China.
| | - Meng-Bo Luo
- School of Physics, Zhejiang University, Hangzhou 310027, China.
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5
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Robertson B, Schofield J, Kapral R. Microscopic theory of a Janus motor in a non-equilibrium fluid: Surface hydrodynamics and boundary conditions. J Chem Phys 2024; 160:014502. [PMID: 38165093 DOI: 10.1063/5.0185361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2023] [Accepted: 12/10/2023] [Indexed: 01/03/2024] Open
Abstract
We present a derivation from the first principles of the coupled equations of motion of an active self-diffusiophoretic Janus motor and the hydrodynamic densities of its fluid environment that are nonlinearly displaced from equilibrium. The derivation makes use of time-dependent projection operator techniques defined in terms of slowly varying coarse-grained microscopic densities of the fluid species number, total momentum, and energy. The exact equations of motion are simplified using time scale arguments, resulting in Markovian equations for the Janus motor linear and angular velocities with average forces and torques that depend on the fluid densities. For a large colloid, the fluid equations are separated into bulk and interfacial contributions, and the conditions under which the dynamics of the fluid densities can be accurately represented by bulk hydrodynamic equations subject to boundary conditions on the colloid are determined. We show how the results for boundary conditions based on continuum theory can be obtained from the molecular description and provide Green-Kubo expressions for all transport coefficients, including the diffusiophoretic coupling and the slip coefficient.
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Affiliation(s)
- Bryan Robertson
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Jeremy Schofield
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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6
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Panda A, Winkler RG, Singh SP. Characteristic features of self-avoiding active Brownian polymers under linear shear flow. SOFT MATTER 2023; 19:8577-8586. [PMID: 37905462 DOI: 10.1039/d3sm01334k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/02/2023]
Abstract
We present Brownian dynamics simulation results of a flexible linear polymer with excluded-volume interactions under shear flow in the presence of active noise. The active noise strongly affects the polymer's conformational and dynamical properties, such as the stretching in the flow direction and compression in the gradient direction, shear-induced alignment, and shear viscosity. In the asymptotic limit of large activities and shear rates, the power-law scaling exponents of these quantities differ significantly from those of passive polymers. The chain's shear-induced stretching at a given shear rate is reduced by active noise, and it displays a non-monotonic behavior, where an initial polymer compression is followed by its stretching with increasing active force. The compression of the polymer in the gradient direction follows the relation ∼WiPe-3/4 as a function of the activity-dependent Weissenberg number WiPe, which differs from the scaling observed in passive systems ∼WiPe-1/2. The flow-induced alignment at large Péclet numbers Pe ≫ 1, where Pe is the Péclet number, and large shear rates WiPe ≫ 1 displays the scaling behavior WiPe-1/2, with an exponent differing from the passive value -1/3. Furthermore, the polymer's zero-shear viscosity displays a non-monotonic behavior, decreasing in an intermediate activity regime due to excluded-volume interactions and increasing again for large Pe. Shear thinning appears with increasing Weissenberg number with the power-laws WiPe-1/2 and WiPe-3/4 for passive and active polymers, respectively. In addition, our simulation results are compared with the results of an analytical approach, which predicts quantitatively similar behaviors for the various aforementioned physical quantities.
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Affiliation(s)
- Arindam Panda
- Department of Physics, Indian Institute of Science Education and Research, Bhopal 462 066, Madhya Pradesh, India.
| | - Roland G Winkler
- Theoretical Physics of Living Matter, Institute of Biological Information Processing and Institute for Advanced Simulation, Forschungszentrum Jülich, 52428 Jülich, Germany.
| | - Sunil P Singh
- Department of Physics, Indian Institute of Science Education and Research, Bhopal 462 066, Madhya Pradesh, India.
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7
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Ricard A, Restagno F, Jang YH, Lansac Y, Raspaud E. Corrosion-driven droplet wetting on iron nanolayers. Sci Rep 2023; 13:18288. [PMID: 37880431 PMCID: PMC10600194 DOI: 10.1038/s41598-023-45547-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Accepted: 10/19/2023] [Indexed: 10/27/2023] Open
Abstract
The classical Evans' drop describes a drop of aqueous salt solution, placed on a bulk metal surface where it displays a corrosion pit that grows over time producing further oxide deposits from the metal dissolution. We focus here on the corrosion-induced droplet spreading using iron nanolayers whose semi-transparency allowed us to monitor both iron corrosion propagation and electrolyte droplet behavior by simple optical means. We thus observed that pits grow under the droplet and merge into a corrosion front. This front reached the triple contact line and drove a non radial spreading, until it propagated outside the immobile droplet. Such chemically-active wetting is only observed in the presence of a conductive substrate that provides strong adhesion of the iron nanofilm to the substrate. By revisiting the classic Evan's drop experiment on thick iron film, a weaker corrosion-driven droplet spreading is also identified. These results require further investigations, but they clearly open up new perspectives on substrate wetting by corrosion-like electrochemical reactions at the nanometer scale.
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Affiliation(s)
- Aurelien Ricard
- Laboratoire de Physique des Solides, Université Paris-Saclay, CNRS, 91405, Orsay Cedex, France
| | - Frederic Restagno
- Laboratoire de Physique des Solides, Université Paris-Saclay, CNRS, 91405, Orsay Cedex, France
| | - Yun Hee Jang
- Laboratoire de Physique des Solides, Université Paris-Saclay, CNRS, 91405, Orsay Cedex, France
- GREMAN UMR 7347, CNRS, INSA CVL, Université de Tours, 37200, Tours, France
- Department of Energy Science and Engineering, DGIST, Daegu, 42988, Korea
| | - Yves Lansac
- Laboratoire de Physique des Solides, Université Paris-Saclay, CNRS, 91405, Orsay Cedex, France
- GREMAN UMR 7347, CNRS, INSA CVL, Université de Tours, 37200, Tours, France
- Department of Energy Science and Engineering, DGIST, Daegu, 42988, Korea
| | - Eric Raspaud
- Laboratoire de Physique des Solides, Université Paris-Saclay, CNRS, 91405, Orsay Cedex, France.
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8
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Kumar P, Chakrabarti R. Escape dynamics of a self-propelled nanorod from circular confinements with narrow openings. SOFT MATTER 2023; 19:6743-6753. [PMID: 37623699 DOI: 10.1039/d3sm00723e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/26/2023]
Abstract
We perform computer simulations to explore the escape dynamics of a self-propelled (active) nanorod from circular confinements with narrow opening(s). Our results clearly demonstrate how the persistent and directed motion of the nanorod helps it to escape. Such escape events are absent if the nanorod is passive. To quantify the escape dynamics, we compute the radial probability density function (RPDF) and mean first escape time (MFET) and show how the activity is responsible for the bimodality of RPDF, which is clearly absent if the nanorod is passive. Broadening of displacement distributions with activity has also been observed. The computed mean first escape time decreases with activity. In contrast, the fluctuations of the first escape times vary in a non-monotonic way. This results in high values of the coefficient of variation and indicates the presence of multiple timescales in first escape time distributions and multimodality in uniformity index distributions. We hope our study will help in differentiating activity-driven escape dynamics from purely thermal passive diffusion in confinement.
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Affiliation(s)
- Praveen Kumar
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai 400076, India.
| | - Rajarshi Chakrabarti
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai 400076, India.
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9
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Wittmann M, Voigtmann M, Simmchen J. Active BiVO 4 Swimmers Propelled by Depletion Gradients Caused by Photodeposition. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2023; 19:e2206885. [PMID: 36683219 DOI: 10.1002/smll.202206885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Revised: 12/15/2022] [Indexed: 06/17/2023]
Abstract
Artificial active matter often self-propels by creating gradients of one or more species or quantities. For chemical swimmers, most frequently either O2 or H+ that are created in certain catalytic reactions are causing the interfacial flows which drive the self-propulsion. While the palette of reactions is extending constantly, especially toward more bio-compatible fuels, the depletion of species is often overlooked. Here, the photodeposition of metal species on BiVO4 micro swimmers is considered. During the photodeposition reaction, metal ions are removed from the solution creating a depleted region around the particle. The ability of this depletion to drive active motion of artificial micro swimmers, as well as the influences of different metal ions and counter ions on the motion are investigated and cross compared.
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Affiliation(s)
- Martin Wittmann
- Chair of Physical Chemistry, TU Dresden, 01069, Dresden, Germany
| | | | - Juliane Simmchen
- Chair of Physical Chemistry, TU Dresden, 01069, Dresden, Germany
- Pure and applied Chemistry, University of Strathclyde, Glasgow, G1 1BX, UK
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10
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Su M, Lindner B. Active Brownian particles in a biased periodic potential. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2023; 46:22. [PMID: 36995501 DOI: 10.1140/epje/s10189-023-00283-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Accepted: 03/19/2023] [Indexed: 06/19/2023]
Abstract
We study transport properties of an active Brownian particle with an Rayleigh-Helmholtz friction function in a biased periodic potential. In the absence of noise and depending on the parameters of the friction function and on the bias force, the motion of the particle can be in a locked state or in different running states. According to the type of solutions, the parameter plane of friction and bias force can be divided into four regions. In these different regimes, there is either only a locked state, only a running state, a bistability between locked and running states, or a bistability of two different running states (corresponding to a systematic motion to the left or right, respectively). In the presence of noise, the mean velocity depends in different ways on the noise intensity for the various parameter regimes. These dependences are explored by means of numerical simulations and simple analytical estimates for limiting cases.
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Affiliation(s)
- Meng Su
- School of Mathematics and Statistics, Northwestern Polytechnical University, 710129, Xi'an, Shaanxi, People's Republic of China.
| | - Benjamin Lindner
- Department of Physics, Humboldt Universität zu Berlin, Newtonstr 15, 12489, Berlin, Germany
- Bernstein Center for Computational Neuroscience, Haus 2, Philippstr 13, 10115, Berlin, Germany
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11
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Roca-Bonet S, Wagner M, Ripoll M. Clustering of self-thermophilic asymmetric dimers: the relevance of hydrodynamics. SOFT MATTER 2022; 18:7741-7751. [PMID: 35916336 DOI: 10.1039/d2sm00523a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Self-thermophilic dimers are characterized by a net phoretic attraction which, in combination with hydrodynamic interactions, results in the formation of crystalline-like aggregates. To distinguish the effect of the different contributions is frequently an important challenge. We present a simulation investigation done in parallel in the presence and the absence of hydrodynamic interactions for the case of asymmetric self-thermophoretic dimers. In the absence of hydrodynamics, the clusters have the standard heads-in configurations. In contrast, in the presence of hydrodynamics, clusters with heads-in conformation are being formed, in which dimers with their propulsion velocity pointing out of the cluster are assembled and stabilized by strong hydrodynamic osmotic flows. Significant variation in the material properties is to be expected from such differences in the collective behavior, whose understanding and control is of great relevance for the development of new synthetic active materials.
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Affiliation(s)
- Sergi Roca-Bonet
- Theoretical Physics of Living Matter, Institute of Biological Information Processing, Forschungszentrum Jülich, 52425 Jülich, Germany.
| | - Martin Wagner
- Theoretical Physics of Living Matter, Institute of Biological Information Processing, Forschungszentrum Jülich, 52425 Jülich, Germany.
| | - Marisol Ripoll
- Theoretical Physics of Living Matter, Institute of Biological Information Processing, Forschungszentrum Jülich, 52425 Jülich, Germany.
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12
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Negro G, Caporusso CB, Digregorio P, Gonnella G, Lamura A, Suma A. Hydrodynamic effects on the liquid-hexatic transition of active colloids. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2022; 45:75. [PMID: 36098879 PMCID: PMC9470657 DOI: 10.1140/epje/s10189-022-00230-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Accepted: 08/25/2022] [Indexed: 05/06/2023]
Abstract
We study numerically the role of hydrodynamics in the liquid-hexatic transition of active colloids at intermediate activity, where motility induced phase separation (MIPS) does not occur. We show that in the case of active Brownian particles (ABP), the critical density of the transition decreases upon increasing the particle's mass, enhancing ordering, while self-propulsion has the opposite effect in the activity regime considered. Active hydrodynamic particles (AHP), instead, undergo the liquid-hexatic transition at higher values of packing fraction [Formula: see text] than the corresponding ABP, suggesting that hydrodynamics have the net effect of disordering the system. At increasing densities, close to the hexatic-liquid transition, we found in the case of AHP the appearance of self-sustained organized motion with clusters of particles moving coherently.
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Affiliation(s)
- G Negro
- Dipartimento di Fisica, Università degli Studi di Bari and INFN, Sezione di Bari, via Amendola 173, Bari, 70126, Italy
| | - C B Caporusso
- Dipartimento di Fisica, Università degli Studi di Bari and INFN, Sezione di Bari, via Amendola 173, Bari, 70126, Italy.
| | - P Digregorio
- Centre Européen de Calcul Atomique et Moléculaire (CECAM), Ecole Polytechnique Fédérale de Lausanne (EPFL), Batochimie, Avenue Forel 2, 1015, Lausanne, Switzerland
| | - G Gonnella
- Dipartimento di Fisica, Università degli Studi di Bari and INFN, Sezione di Bari, via Amendola 173, Bari, 70126, Italy
| | - A Lamura
- Istituto Applicazioni Calcolo, CNR, Via Amendola 122/D, 70126, Bari, Italy
| | - A Suma
- Dipartimento di Fisica, Università degli Studi di Bari and INFN, Sezione di Bari, via Amendola 173, Bari, 70126, Italy
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13
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Roy T, Chaurasia SS, Parmananda P. Phase-flip transition in volume-mismatched pairs of coupled 1-pentanol drops. Phys Rev E 2022; 106:034614. [PMID: 36266858 DOI: 10.1103/physreve.106.034614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 09/07/2022] [Indexed: 06/16/2023]
Abstract
We have explored a variety of synchronization domains and observed phase-flip transition in a pair of coupled 1-pentanol drops as a function of the volume mismatch. Both experimental observations and numerical studies are presented. The experiments were carried out in a rectangular channel in a ferroin deionized water solution premixed with some volume of pentanol. A single pentanol drop (≥ 3μL) performs back and forth oscillations along the length of the channel due to the well-known Marangoni forces. In the present work, for a pair of drops, the drop 1 volume was changed from 3 to 5 μL in steps of 1μL, whereas the drop 2 volume was varied from 1 to 3 μL in steps of 0.5μL. A systematic investigation of all the possible combinations of the drop volumes showed the presence of three different types of synchrony-in-phase, antiphase, and phase-switched. In-phase synchronization was robust for a volume mismatch of >3.0μL between the two drops. On the other hand, antiphase synchronization was robust when the volume mismatch was <2.0μL. The phase-switched state is a synchronized state involving a phase-flip transition in the time domain. This state was observed for the intermediate range of volume mismatch. Numerically, the system has been investigated using two Stuart-Landau oscillators interacting via a coupling function in the form of Lennard-Jones potential. The numerical results suitably capture both in-phase and antiphase oscillations for a pair of volume-mismatched pentanol drops.
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Affiliation(s)
- Tanushree Roy
- Department of Physics, IIT Bombay, Mumbai-400076, Maharashtra, India
| | | | - P Parmananda
- Department of Physics, IIT Bombay, Mumbai-400076, Maharashtra, India
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14
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Li Y, Wu J, Oku H, Ma G. Polymer‐Modified Micromotors with Biomedical Applications: Promotion of Functionalization. ADVANCED NANOBIOMED RESEARCH 2022. [DOI: 10.1002/anbr.202200074] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Yanan Li
- State Key Laboratory of Biochemical Engineering Institute of Process Engineering Chinese Academy of Sciences Beijing 100190 P. R. China
- Division of Molecular Science Graduate School of Science and Engineering Gunma University Gunma 376-8515 Japan
| | - Jie Wu
- State Key Laboratory of Biochemical Engineering Institute of Process Engineering Chinese Academy of Sciences Beijing 100190 P. R. China
| | - Hiroyuki Oku
- Division of Molecular Science Graduate School of Science and Engineering Gunma University Gunma 376-8515 Japan
| | - Guanghui Ma
- State Key Laboratory of Biochemical Engineering Institute of Process Engineering Chinese Academy of Sciences Beijing 100190 P. R. China
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15
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Roca-Bonet S, Ripoll M. Self-phoretic Brownian dynamics simulations. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2022; 45:25. [PMID: 35303182 PMCID: PMC8933386 DOI: 10.1140/epje/s10189-022-00177-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Accepted: 02/22/2022] [Indexed: 05/03/2023]
Abstract
A realistic and effective model to simulate phoretic Brownian dynamics swimmers based on the general form of the thermophoretic force is here presented. The collective behavior of self-phoretic dimers is investigated with this model and compared with two simpler versions, allowing the understanding of the subtle interplay of steric interactions, propulsion, and phoretic effects. The phoretic Brownian dynamics method has control parameters which can be tuned to closely map the properties of experiments or simulations with explicit solvent, in particular those performed with multiparticle collision dynamics. The combination of the phoretic Brownian method and multiparticle collision dynamics is a powerful tool to precisely identify the importance of hydrodynamic interactions in systems of self-phoretic swimmers.
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Affiliation(s)
- Sergi Roca-Bonet
- Theoretical Physics of Living Matter, Institute of Biological Information Processing, Forschungszentrum Jülich, 52425, Jülich, Germany.
| | - Marisol Ripoll
- Theoretical Physics of Living Matter, Institute of Biological Information Processing, Forschungszentrum Jülich, 52425, Jülich, Germany.
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16
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Eisenstecken T, Winkler RG. Path integral description of semiflexible active Brownian polymers. J Chem Phys 2022; 156:064105. [DOI: 10.1063/5.0081020] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | - Roland G. Winkler
- Institute for Advanced Simulation, Forschungszentrum Jülich, Germany
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17
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Huang H, Cui RF, Kou J, Wen Z, Chen JX. The dynamics of chemically propelled dimer motor on a pinning substrate. Phys Chem Chem Phys 2022; 24:11986-11991. [DOI: 10.1039/d2cp00583b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The dynamics of self-propelled micro-motors, in a thin fluid film containing an attractive substrate, is investigated by means of a particle-based simulation. A chemically powered sphere dimer, consisting of a...
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18
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A Brief Review on Challenges in Design and Development of Nanorobots for Medical Applications. APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app112110385] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Robotics is a rapidly growing field, and the innovative idea to scale down the size of robots to the nanometer level has paved a new way of treating human health. Nanorobots have become the focus of many researchers aiming to explore their many potential applications in medicine. This paper focuses on manufacturing techniques involved in the fabrication of nanorobots and their associated challenges in terms of design architecture, sensors, actuators, powering, navigation, data transmission, followed by challenges in applications. In addition, an overview of various nanorobotic systems addresses different architectures of a nanorobot. Moreover, multiple medical applications, such as oncology, drug delivery, and surgery, are reviewed and summarized.
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19
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Krist KT, Sen A, Noid WG. A simple theory for molecular chemotaxis driven by specific binding interactions. J Chem Phys 2021; 155:164902. [PMID: 34717356 DOI: 10.1063/5.0061376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Recent experiments have suggested that enzymes and other small molecules chemotax toward their substrates. However, the physical forces driving this chemotaxis are currently debated. In this work, we consider a simple thermodynamic theory for molecular chemotaxis that is based on the McMillan-Mayer theory of dilute solutions and Schellman's theory for macromolecular binding. Even in the absence of direct interactions, the chemical binding equilibrium introduces a coupling term into the relevant free energy, which then reduces the chemical potential of both enzymes and their substrates. Assuming a local thermodynamic equilibrium, this binding contribution to the chemical potential generates an effective thermodynamic force that promotes chemotaxis by driving each solute toward its binding partner. Our numerical simulations demonstrate that, although small, this thermodynamic force is qualitatively consistent with several experimental studies. Thus, our study may provide additional insight into the role of the thermodynamic binding free energy for molecular chemotaxis.
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Affiliation(s)
- Kathleen T Krist
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Ayusman Sen
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - W G Noid
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA
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20
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Wagner M, Roca-Bonet S, Ripoll M. Collective behavior of thermophoretic dimeric active colloids in three-dimensional bulk. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2021; 44:43. [PMID: 33772651 PMCID: PMC8004524 DOI: 10.1140/epje/s10189-021-00043-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2020] [Accepted: 02/22/2021] [Indexed: 05/20/2023]
Abstract
Colloids driven by phoresis constitute one of the main avenues for the design of synthetic microswimmers. For these swimmers, the specific form of the phoretic and hydrodynamic interactions dramatically influences their dynamics. Explicit solvent simulations allow the investigation of the different behaviors of dimeric Janus active colloids. The phoretic character is modified from thermophilic to thermophobic, and this, together with the relative size of the beads, strongly influences the resulting solvent velocity fields. Hydrodynamic flows can change from puller-type to pusher-type, although the actual flows significantly differ from these standard flows. Such hydrodynamic interactions combined with phoretic interactions between dimers result in several interesting phenomena in three-dimensional bulk conditions. Thermophilic dimeric swimmers are attracted to each other and form large and stable aggregates. Repulsive phoretic interactions among thermophobic dimeric swimmers hinder such clustering and lead, together with long- and short-ranged attractive hydrodynamic interactions, to short-lived, aligned swarming structures.
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Affiliation(s)
- Martin Wagner
- Theoretical Physics of Living Matter, Institute of Biological Information Processing, Forschungszentrum Jülich, 52425, Jülich, Germany
| | - Sergi Roca-Bonet
- Theoretical Physics of Living Matter, Institute of Biological Information Processing, Forschungszentrum Jülich, 52425, Jülich, Germany
| | - Marisol Ripoll
- Theoretical Physics of Living Matter, Institute of Biological Information Processing, Forschungszentrum Jülich, 52425, Jülich, Germany.
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21
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Möller N, Liebchen B, Palberg T. Shaping the gradients driving phoretic micro-swimmers: influence of swimming speed, budget of carbonic acid and environment. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2021; 44:41. [PMID: 33759011 PMCID: PMC7987694 DOI: 10.1140/epje/s10189-021-00026-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Accepted: 01/22/2021] [Indexed: 05/07/2023]
Abstract
pH gradient-driven modular micro-swimmers are investigated as a model for a large variety of quasi-two-dimensional chemi-phoretic self-propelled entities. Using three-channel micro-photometry, we obtain a precise large field mapping of pH at a spatial resolution of a few microns and a pH resolution of [Formula: see text] units for swimmers of different velocities propelling on two differently charged substrates. We model our results in terms of solutions of the three-dimensional advection-diffusion equation for a 1:1 electrolyte, i.e. carbonic acid, which is produced by ion exchange and consumed by equilibration with dissolved [Formula: see text]. We demonstrate the dependence of gradient shape and steepness on swimmer speed, diffusivity of chemicals, as well as the fuel budget. Moreover, we experimentally observe a subtle, but significant feedback of the swimmer's immediate environment in terms of a substrate charge-mediated solvent convection. We discuss our findings in view of different recent results from other micro-fluidic or active matter investigations. We anticipate that they are relevant for quantitative modelling and targeted applications of diffusio-phoretic flows in general and artificial micro-swimmers in particular.
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Affiliation(s)
- Nadir Möller
- Institute of Condensed Matter Physics, Johannes Gutenberg Universität, Staudinger Weg 7, 55128, Mainz, Germany.
- Max Planck Graduade Center, Institute of Physics, Johannes Gutenberg Universität, Staudinger Weg 7, 55128, Mainz, Germany.
| | - Benno Liebchen
- Institute for Condensed Matter Physics, Technische Universität Darmstadt, Hochschulstr. 8, 64289, Darmstadt, Germany
| | - Thomas Palberg
- Institute of Condensed Matter Physics, Johannes Gutenberg Universität, Staudinger Weg 7, 55128, Mainz, Germany
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22
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Mallick A, Paul S, Ben T, Qiu S, Verpoort F, Roy S. Direct realization of an Operando Systems Chemistry Algorithm (OSCAL) for powering nanomotors. NANOSCALE 2021; 13:3543-3551. [PMID: 33514988 DOI: 10.1039/d0nr06849g] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Systems chemistry focuses on emergent properties in a complex matter. To design and demonstrate such emergent properties like autonomous motion in nanomotors as an output of an Operando Systems Chemistry Algorithm (OSCAL), we employ a 2-component system comprising porous organic frameworks (POFs) and soft-oxometalates (SOMs). The OSCAL governs the motion of the nanocarpets by the coding and reading of information in an assembly/disassembly cascade switched on by a chemical stimulus. Assembly algorithm docks SOMs into the pores of the POFs of the nanocarpet leading to the encoding of supramolecular structural information in the SOM-POF hybrid nanocarpet. Input of a chemical fuel to the system induces a catalytic reaction producing propellant gases and switches on the disassembly of SOMs that are concomitantly released from the pores of the SOM-POF nanocarpets producing a ballast in the system as a read-out of the coded information acquired in the supramolecular assembly. The OSCAL governs the motion of the nanocarpets in steps. The assembly/disassembly of SOM-POFs, releasing SOMs from the pores of SOM-POFs induced by a catalytic reaction triggered by a chemical stimulus coupled with the evolution of gas are the input. The output is the autonomous linear motion of the SOM-POF nanocarpets resulting from the read-out of the input information. This work thus manifests the operation of a designed Systems Chemistry algorithm which sets supramolecularly assembled SOM-POF nanocarpets into autonomous ballistic motion.
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Affiliation(s)
- Apabrita Mallick
- Eco-Friendly Applied Materials Laboratory (EFAML), Materials Science Centre, Department of Chemical Sciences, Mohanpur Campus, Indian Institute of Science Education and Research, Kolkata, 741246, West Bengal, India.
| | - Shounik Paul
- Eco-Friendly Applied Materials Laboratory (EFAML), Materials Science Centre, Department of Chemical Sciences, Mohanpur Campus, Indian Institute of Science Education and Research, Kolkata, 741246, West Bengal, India.
| | - Teng Ben
- Department of Chemistry, Jilin University, Changchun 130012, China.
| | - Shilun Qiu
- Department of Chemistry, Jilin University, Changchun 130012, China.
| | - Francis Verpoort
- LOCOM, State Key Laboratory of Advanced Technology for Materials Synthesis and Processing, Wuhan University of Technology, 430070 Wuhan, P.R. China and Ghent University - Global Campus Songdo, 119 Songdomunhwa-Ro, Ywonsu-Gu, Incheon, Republic of Korea. and National Research Tomsk Polytechnic University, Lenin Avenue 30, 634050 Tomsk, Russian Federation
| | - Soumyajit Roy
- Eco-Friendly Applied Materials Laboratory (EFAML), Materials Science Centre, Department of Chemical Sciences, Mohanpur Campus, Indian Institute of Science Education and Research, Kolkata, 741246, West Bengal, India.
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23
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Li R, Gompper G, Ripoll M. Tumbling and Vorticity Drift of Flexible Helicoidal Polymers in Shear Flow. Macromolecules 2021. [DOI: 10.1021/acs.macromol.0c01651] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Run Li
- Theoretical Physics of Living Matter, Institute of Biological Information Processing and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany
| | - Gerhard Gompper
- Theoretical Physics of Living Matter, Institute of Biological Information Processing and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany
| | - Marisol Ripoll
- Theoretical Physics of Living Matter, Institute of Biological Information Processing and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany
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24
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MacDonald TC, Feringa BL, Price WS, Wezenberg SJ, Beves JE. Controlled Diffusion of Photoswitchable Receptors by Binding Anti-electrostatic Hydrogen-Bonded Phosphate Oligomers. J Am Chem Soc 2020; 142:20014-20020. [PMID: 33180496 PMCID: PMC7735709 DOI: 10.1021/jacs.0c09072] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Indexed: 12/12/2022]
Abstract
Dihydrogen phosphate anions are found to spontaneously associate into anti-electrostatic oligomers via hydrogen bonding interactions at millimolar concentrations in DMSO. Diffusion NMR measurements supported formation of these oligomers, which can be bound by photoswitchable anion receptors to form large bridged assemblies of approximately three times the volume of the unbound receptor. Photoisomerization of the oligomer-bound receptor causes a decrease in diffusion coefficient of up to 16%, corresponding to a 70% increase in effective volume. This new approach to external control of diffusion opens prospects in controlling molecular transport using light.
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Affiliation(s)
| | - Ben L. Feringa
- Stratingh Institute for Chemistry, University
of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - William S. Price
- School of Science, Western Sydney University, Penrith, NSW 2751, Australia
| | - Sander J. Wezenberg
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands
| | - Jonathon E. Beves
- School of Chemistry, University of New South Wales Sydney, NSW 2052, Australia
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25
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Robertson B, Schofield J, Gaspard P, Kapral R. Molecular theory of Langevin dynamics for active self-diffusiophoretic colloids. J Chem Phys 2020; 153:124104. [PMID: 33003702 DOI: 10.1063/5.0020553] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Abstract
Active colloidal particles that are propelled by a self-diffusiophoretic mechanism are often described by Langevin equations that are either postulated on physical grounds or derived using the methods of fluctuating hydrodynamics. While these descriptions are appropriate for colloids of micrometric and larger size, they will break down for very small active particles. A fully microscopic derivation of Langevin equations for self-diffusiophoretic particles powered by chemical reactions catalyzed asymmetrically by the colloid is given in this paper. The derivation provides microscopic expressions for the translational and rotational friction tensors, as well as reaction rate coefficients appearing in the Langevin equations. The diffusiophoretic force and torque are expressed in terms of nonequilibrium averages of fluid fields that satisfy generalized transport equations. The results provide a description of active motion on small scales where descriptions in terms of coarse grained continuum fluid equations combined with boundary conditions that account for the presence of the colloid may not be appropriate.
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Affiliation(s)
- Bryan Robertson
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Jeremy Schofield
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Pierre Gaspard
- Center for Nonlinear Phenomena and Complex Systems, Université Libre de Bruxelles (U.L.B.), Code Postal 231, Campus Plaine, B-1050 Brussels, Belgium
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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26
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Jamaluddin SJS, Khaothong K, Tinsley MR, Showalter K. Photochemical motion control of surface active Belousov-Zhabotinsky droplets. CHAOS (WOODBURY, N.Y.) 2020; 30:083143. [PMID: 32872820 DOI: 10.1063/5.0016252] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Accepted: 08/05/2020] [Indexed: 06/11/2023]
Abstract
Photochemical control of the motion of surface active Belousov-Zhabotinsky (BZ) droplets in an oil-surfactant medium is carried out with illumination intensity gradients. Droplet motion is analyzed under conditions of constant uniform illumination and a constant illumination gradient. Control of droplet motion is developed by testing different illumination gradients. Complex hypotrochoid target trajectories are tracked by BZ droplets illuminated with two-dimensional V-shaped gradients.
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Affiliation(s)
- Syed Jazli Syed Jamaluddin
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506-6045, USA
| | - Kritsana Khaothong
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506-6045, USA
| | - Mark R Tinsley
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506-6045, USA
| | - Kenneth Showalter
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506-6045, USA
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27
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Affiliation(s)
- Roland G. Winkler
- Theoretical Physics of Living Matter, Institute of Biological Information Processing and Institute for Advanced Simulation, Forschungszentrum Jülich, D-52425 Jülich, Germany
| | - Gerhard Gompper
- Theoretical Physics of Living Matter, Institute of Biological Information Processing and Institute for Advanced Simulation, Forschungszentrum Jülich, D-52425 Jülich, Germany
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28
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Biswas A, Cruz JM, Parmananda P, Das D. First passage of an active particle in the presence of passive crowders. SOFT MATTER 2020; 16:6138-6144. [PMID: 32555827 DOI: 10.1039/d0sm00350f] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
We experimentally study the stochastic transport of a self-propelled camphor boat, driven by Marangoni forces, through a crowd of passive paper discs floating on water. We analyze the statistics of the first passage times of the active particle to travel from the center of a circular container to its boundary. While the mean times rise monotonically as a function of the covered area fraction φ of the passive paper discs, their fluctuations show a non-monotonic behavior - being higher at low and high value of φ compared to intermediate values. The reason is traced to an interplay of two distinct sources of fluctuations - one intrinsic to the dynamics, while the other due to the crowding.
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Affiliation(s)
- Animesh Biswas
- Indian Institute of Technology Bombay, Powai-400076, Mumbai, India.
| | - J M Cruz
- Indian Institute of Technology Bombay, Powai-400076, Mumbai, India.
| | - P Parmananda
- Indian Institute of Technology Bombay, Powai-400076, Mumbai, India.
| | - Dibyendu Das
- Indian Institute of Technology Bombay, Powai-400076, Mumbai, India.
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29
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Abstract
Suspensions of chemically powered self-propelled colloidal particles are examples of active matter systems with interesting properties. While simple spherical Janus particles are often studied, it is known that geometry is important and recent experiments have shown that chemically active torus-shaped colloids behave differently from spherical colloids. In this paper, coarse-grained microscopic simulations of the dynamics of self-diffusiophoretic torus colloids are carried out in bulk solution in order to study how torus geometric factors influence their active motion. The concentration and velocity fields are key ingredients in self-diffusiophoretic propulsion, and the forms that these fields take in the colloid vicinity are shown to be strong functions of torus geometric parameters such as the torus hole size and thickness of the torus tube. This work utilizes a method where self-diffusiophoretic torus colloids with various geometric and dynamical characteristics can be built and studied in fluid media that include chemical reactions and fluid flows. The model can be used to investigate the collective properties of these colloids and their dynamics in confined systems, topics that are of general importance for applications that use colloidal motors with complex geometries.
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Affiliation(s)
- Jiyuan Wang
- School of Electrical and Control Engineering, Heilongjiang University of Science and Technology, Harbin 150022, People's Republic of China
| | - Mu-Jie Huang
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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30
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Dong RY, Zhang Y, Lou K, Granick S. Micromotor That Carries Its Own Fuel Internally. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2020; 36:7701-7705. [PMID: 32571028 DOI: 10.1021/acs.langmuir.0c01486] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Micromotors enjoy burgeoning interest but a limitation of their design is to require continuous supply of new fuel. The preponderance of extant micromotors depend, for their motion, on irradiation by light or exposure to acid in their environment. Here we demonstrate a motor that carries its own fuel internally, in this sense representing an analogue, in micron-sized objects, of the internal combustion engine. The fuel is DPCP (diphenylcyclopropenone) microcrystal, a solid-state chemical that after ignition by UV light requires no further irradiation to sustain a chemical reaction that emits carbon monoxide gas that can be used to propel the particle on which this chemical resides. It is loaded asymmetrically onto inexpensive microparticles to produce internally fueled propulsion with speed up to ∼20 μm/s over distances up to 15 times the capsule length in water. Once ignited, the motors maintain their direction of motion and move without need for light to follow their path. Possible strategies to extend the idea beyond the current proof of concept are discussed.
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Affiliation(s)
- Ruo-Yu Dong
- Center for Soft and Living Matter, Institute for Basic Science (IBS), Ulsan 44919, South Korea
| | - Yifan Zhang
- Center for Soft and Living Matter, Institute for Basic Science (IBS), Ulsan 44919, South Korea
- Department of Chemistry, University of Victoria, 3800 Finnerty Road, Victoria, British Columbia V8P 5C2, Canada
| | - Kai Lou
- Center for Soft and Living Matter, Institute for Basic Science (IBS), Ulsan 44919, South Korea
| | - Steve Granick
- Center for Soft and Living Matter, Institute for Basic Science (IBS), Ulsan 44919, South Korea
- Departments of Chemistry and Physics, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, South Korea
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31
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Gaspard P, Kapral R. Active Matter, Microreversibility, and Thermodynamics. RESEARCH 2020; 2020:9739231. [PMID: 32524094 PMCID: PMC7260603 DOI: 10.34133/2020/9739231] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/15/2020] [Accepted: 04/19/2020] [Indexed: 11/12/2022]
Abstract
Active matter, comprising many active agents interacting and moving in fluids or more complex environments, is a commonly occurring state of matter in biological and physical systems. By its very nature, active matter systems exist in nonequilibrium states. In this paper, the active agents are small Janus colloidal particles that use chemical energy provided by chemical reactions occurring on their surfaces for propulsion through a diffusiophoretic mechanism. As a result of interactions among these colloids, either directly or through fluid velocity and concentration fields, they may act collectively to form structures such as dynamic clusters. A general nonequilibrium thermodynamics framework for the description of such systems is presented that accounts for both self-diffusiophoresis and diffusiophoresis due to external concentration gradients, and is consistent with microreversibility. It predicts the existence of a reciprocal effect of diffusiophoresis back onto the reaction rate for the entire collection of colloids in the system, as well as the existence of a clustering instability that leads to nonequilibrium inhomogeneous system states.
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Affiliation(s)
- Pierre Gaspard
- Center for Nonlinear Phenomena and Complex Systems, Université Libre de Bruxelles (U.L.B.), Code Postal 231, Campus Plaine, B-1050 Brussels, Belgium
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario, Canada M5S 3H6
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32
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Gompper G, Winkler RG, Speck T, Solon A, Nardini C, Peruani F, Löwen H, Golestanian R, Kaupp UB, Alvarez L, Kiørboe T, Lauga E, Poon WCK, DeSimone A, Muiños-Landin S, Fischer A, Söker NA, Cichos F, Kapral R, Gaspard P, Ripoll M, Sagues F, Doostmohammadi A, Yeomans JM, Aranson IS, Bechinger C, Stark H, Hemelrijk CK, Nedelec FJ, Sarkar T, Aryaksama T, Lacroix M, Duclos G, Yashunsky V, Silberzan P, Arroyo M, Kale S. The 2020 motile active matter roadmap. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2020; 32:193001. [PMID: 32058979 DOI: 10.1088/1361-648x/ab6348] [Citation(s) in RCA: 137] [Impact Index Per Article: 34.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
Activity and autonomous motion are fundamental in living and engineering systems. This has stimulated the new field of 'active matter' in recent years, which focuses on the physical aspects of propulsion mechanisms, and on motility-induced emergent collective behavior of a larger number of identical agents. The scale of agents ranges from nanomotors and microswimmers, to cells, fish, birds, and people. Inspired by biological microswimmers, various designs of autonomous synthetic nano- and micromachines have been proposed. Such machines provide the basis for multifunctional, highly responsive, intelligent (artificial) active materials, which exhibit emergent behavior and the ability to perform tasks in response to external stimuli. A major challenge for understanding and designing active matter is their inherent nonequilibrium nature due to persistent energy consumption, which invalidates equilibrium concepts such as free energy, detailed balance, and time-reversal symmetry. Unraveling, predicting, and controlling the behavior of active matter is a truly interdisciplinary endeavor at the interface of biology, chemistry, ecology, engineering, mathematics, and physics. The vast complexity of phenomena and mechanisms involved in the self-organization and dynamics of motile active matter comprises a major challenge. Hence, to advance, and eventually reach a comprehensive understanding, this important research area requires a concerted, synergetic approach of the various disciplines. The 2020 motile active matter roadmap of Journal of Physics: Condensed Matter addresses the current state of the art of the field and provides guidance for both students as well as established scientists in their efforts to advance this fascinating area.
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Affiliation(s)
- Gerhard Gompper
- Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany
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33
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Calero C, Sibert Iii EL, Rey R. Self-thermophoresis at the nanoscale using light induced solvation dynamics. NANOSCALE 2020; 12:7557-7562. [PMID: 32227019 DOI: 10.1039/d0nr01169j] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Downsizing microswimmers to the nanoscale, and using light as an externally controlled fuel, are two important goals within the field of active matter. Here we demonstrate using all-atom molecular dynamics simulations that solvation relaxation, the solvent dynamics induced after visible light electronic excitation of a fluorophore, can be used to propel nanoparticles immersed in polar solvents. We show that fullerenes functionalized with fluorophore molecules in liquid water exhibit substantial enhanced mobility under external excitation, with a propulsion speed proportional to the power dissipated into the system. We show that the propulsion mechanism is quantitatively consistent with a molecular scale instance of self-thermophoresis. Strategies to direct the motion of functionalized fullerenes in a given direction using confined environments are also discussed.
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Affiliation(s)
- Carles Calero
- Departament de Física de la Matèria Condensada and Institut de Nanociència i Nanotecnologia, Universitat de Barcelona, 08028 Barcelona, Spain
| | - Edwin L Sibert Iii
- Department of Chemistry and Theoretical Chemistry Institute, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
| | - Rossend Rey
- Departament de Física, Universitat Politècnica de Catalunya, Barcelona 08034, Spain.
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34
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Peter T, Malgaretti P, Rivas N, Scagliarini A, Harting J, Dietrich S. Numerical simulations of self-diffusiophoretic colloids at fluid interfaces. SOFT MATTER 2020; 16:3536-3547. [PMID: 32215402 DOI: 10.1039/c9sm02247c] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The dynamics of active colloids is very sensitive to the presence of boundaries and interfaces which therefore can be used to control their motion. Here we analyze the dynamics of active colloids adsorbed at a fluid-fluid interface. By using a mesoscopic numerical approach which relies on an approximated numerical solution of the Navier-Stokes equation, we show that when adsorbed at a fluid interface, an active colloid experiences a net torque even in the absence of a viscosity contrast between the two adjacent fluids. In particular, we study the dependence of this torque on the contact angle of the colloid with the fluid-fluid interface and on its surface properties. We rationalize our results via an approximate approach which accounts for the appearance of a local friction coefficient. By providing insight into the dynamics of active colloids adsorbed at fluid interfaces, our results are relevant for two-dimensional self assembly and emulsion stabilization by means of active colloids.
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Affiliation(s)
- T Peter
- Max Planck Institute for Intelligent Systems, Heisenbergstr. 3, 70569 Stuttgart, Germany.
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35
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Reigh SY, Huang MJ, Löwen H, Lauga E, Kapral R. Active rotational dynamics of a self-diffusiophoretic colloidal motor. SOFT MATTER 2020; 16:1236-1245. [PMID: 31904757 DOI: 10.1039/c9sm01977d] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The dynamics of a spherical chemically-powered synthetic colloidal motor that operates by a self-diffusiophoretic mechanism and has a catalytic domain of arbitrary shape is studied using both continuum theory and particle-based simulations. The motor executes active rotational motion when self-generated concentration gradients and interactions between the chemical species and colloidal motor surface break spherical symmetry. Local variations of chemical reaction rates on the motor catalytic surface with catalytic domain sizes and shapes provide such broken symmetry conditions. A continuum theoretical description of the active rotational motion is given, along with the results of particle-based simulations of the active dynamics. From these results a detailed description of the factors responsible for the active rotational dynamics can be given. Since active rotational motion often plays a significant part in the nature of the collective dynamics of many-motor systems and can be used to control motor motion in targeted cargo transport, our results should find applications beyond those considered here.
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Affiliation(s)
- Shang Yik Reigh
- The Research Institute of Basic Sciences, Seoul National University, Seoul 08826, Republic of Korea.
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Jiang S, Kaltbeitzel A, Hu M, Suraeva O, Crespy D, Landfester K. One-Step Preparation of Fuel-Containing Anisotropic Nanocapsules with Stimuli-Regulated Propulsion. ACS NANO 2020; 14:498-508. [PMID: 31887001 DOI: 10.1021/acsnano.9b06408] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
One of the dreams of nanotechnology is to create tiny objects, nanobots, that are able to perform difficult tasks in dimensions and locations that are not directly accessible. One basic function of these nanobots is motility. Movements created by self-propelled micro- and nanovehicles are usually dependent on the production of propellants from catalytic reactions of fuels present in the environment. Developing self-powered nanovehicles with internally stored fuels that display motion regulated by external stimuli represents an intriguing and challenging alternative. Herein, a one-step preparation of fuel-containing nanovehicles that feature a motion that can be regulated by external stimuli is reported. Nanovehicles are prepared via a sol-gel process confined at the oil/water interface of miniemulsions. The nanovehicles display shapes ranging from mushroom-like to truncated cones and a core-shell structure so that the silica shell acts as a hull for the nanovehicles while the core is used to store the fuel. Azo-based initiators are loaded in the nanovehicles, which are activated to release nitrogen gas upon increase of temperature or exposure to UV light. Enhanced diffusion of nanovehicles is achieved upon decomposition of the fuel.
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Affiliation(s)
- Shuai Jiang
- Max Planck Institute for Polymer Research , Ackermannweg 10 , 55128 Mainz , Germany
- Max Planck-VISTEC Partner Laboratory for Sustainable Materials , Vidyasirimedhi Institute of Science and Technology (VISTEC) , Rayong 21210 , Thailand
| | - Anke Kaltbeitzel
- Max Planck Institute for Polymer Research , Ackermannweg 10 , 55128 Mainz , Germany
| | - Minghan Hu
- Max Planck Institute for Polymer Research , Ackermannweg 10 , 55128 Mainz , Germany
| | - Oksana Suraeva
- Max Planck Institute for Polymer Research , Ackermannweg 10 , 55128 Mainz , Germany
| | - Daniel Crespy
- Max Planck-VISTEC Partner Laboratory for Sustainable Materials , Vidyasirimedhi Institute of Science and Technology (VISTEC) , Rayong 21210 , Thailand
- Department of Materials Science and Engineering, School of Molecular Science and Engineering , Vidyasirimedhi Institute of Science and Technology (VISTEC) , Rayong 21210 , Thailand
| | - Katharina Landfester
- Max Planck Institute for Polymer Research , Ackermannweg 10 , 55128 Mainz , Germany
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de Buyl P. Mesoscopic simulations of anisotropic chemically powered nanomotors. Phys Rev E 2019; 100:022603. [PMID: 31574644 DOI: 10.1103/physreve.100.022603] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2018] [Indexed: 11/07/2022]
Abstract
Chemically powered self-propelled colloids generate a motor force by converting locally a source of energy into directed motion, a process that has been explored both in experiments and in computational models. The use of active colloids as building blocks for nanotechnology opens the doors to interesting applications, provided we understand the behavior of these elementary constituents. We build a consistent mesoscopic simulation model for self-propelled colloids of complex shape with the aim of resolving the coupling between their translational and rotational motion. Considering a passive L-shaped colloidal particle, we study its Brownian dynamics and locate its center of hydrodynamics, the tracking point at which translation and rotation decouple. The active L particle displays the same circling trajectories that have been found experimentally, a result which we compare with the Brownian dynamics model. We put forward the role of hydrodynamics by comparing our results with a fluid model in which the particles' velocities are reset randomly. There, the trajectories only display random orientations. We obtain these original simulation results without any parametrization of the algorithm, which makes it a useful method for the preliminary study of active colloids, prior to experimental work.
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Affiliation(s)
- Pierre de Buyl
- Instituut voor Theoretische Fysica, KU Leuven B-3001, Belgium
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39
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Glucose Oxidase Micropumps: Multi-Faceted Effects of Chemical Activity on Tracer Particles Near the Solid–Liquid Interface. CONDENSED MATTER 2019. [DOI: 10.3390/condmat4030073] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
We report the development of glucose oxidase pumps characterized by small lateral dimensions (≈200 μ m). We studied the effects of the activity of the enzyme pump on silica particles (“tracers”) sedimented around the enzyme pump/patch. Once the activity of the pump was turned on (i.e., the glucose substrate was added to the solution), in-plane motion of the tracers away from the enzyme patch, as well as the emergence of an in-plane region around the patch which was depleted by tracers, was observed. The lateral extent of this depletion zone increased in time at a rate dependent both on the glucose concentration and on the areal density of the enzyme in the patch. We argue that, when the tracers were very near the wall, their motion and the emergence of the depletion zone were most likely the result of diffusiophoresis and drag by osmotic flows induced at the wall, rather than that of drag by a solutal buoyancy driven convective flow. We infer that, for the glucose oxidase enzymatic pumps, bulk (solutal buoyancy), as previously reported, as well as surface (osmotic) driven flows coexist and have to be explicitly accounted for. It seems plausible to assume that this is the case in general for enzyme pumps, and these complementary effects should be considered in the design of applications, e.g., stirring or sensing inside microfluidic systems, based on such pumps.
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40
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Speck T. Thermodynamic approach to the self-diffusiophoresis of colloidal Janus particles. Phys Rev E 2019; 99:060602. [PMID: 31330705 DOI: 10.1103/physreve.99.060602] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2019] [Indexed: 01/02/2023]
Abstract
Most available theoretical predictions for the self-diffusiophoretic motion of colloidal particles are based on the hydrodynamic thin boundary layer approximation in combination with a solvent body force due to a self-generated local solute gradient. This gradient is enforced through specifying boundary conditions, typically without accounting for the thermodynamic cost to maintain the gradient. Here, we present an alternative thermodynamic approach that exploits a direct link between dynamics and entropy production: the local detailed balance condition. We study two cases: First, we revisit self-propulsion in a demixing binary solvent. At variance with a slip velocity, we find that propulsion is due to forces at the poles that are perpendicular to the particle surface. Second, for catalytic swimmers driven through liberating chemical free energy we recover previous expressions. In both cases we argue that propulsion is due to asymmetric dissipation and not simply due to an asymmetric concentration of molecular solutes.
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Affiliation(s)
- Thomas Speck
- Institut für Physik, Johannes Gutenberg-Universität Mainz, Staudingerweg 7-9, 55128 Mainz, Germany
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41
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Boniface D, Cottin-Bizonne C, Kervil R, Ybert C, Detcheverry F. Self-propulsion of symmetric chemically active particles: Point-source model and experiments on camphor disks. Phys Rev E 2019; 99:062605. [PMID: 31330666 DOI: 10.1103/physreve.99.062605] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2019] [Indexed: 06/10/2023]
Abstract
Solid undeformable particles surrounded by a liquid medium or interface may propel themselves by altering their local environment. Such nonmechanical swimming is at work in autophoretic swimmers, whose self-generated field gradient induces a slip velocity on their surface, and in interfacial swimmers, which exploit unbalance in surface tension. In both classes of systems, swimmers with intrinsic asymmetry have received the most attention but self-propulsion is also possible for particles that are perfectly isotropic. The underlying symmetry-breaking instability has been established theoretically for autophoretic systems but has yet to be observed experimentally for solid particles. For interfacial swimmers, several experimental works point to such a mechanism, but its understanding has remained incomplete. The goal of this work is to fill this gap. Building on an earlier proposal, we first develop a point-source model that may be applied generically to interfacial or phoretic swimmers. Using this approximate but unifying picture, we show that they operate in very different regimes and obtain analytical predictions for the propulsion velocity and its dependence on swimmer size and asymmetry. Next, we present experiments on interfacial camphor disks showing that they indeed self-propel in an advection-dominated regime where intrinsic asymmetry is irrelevant and that the swimming velocity increases sublinearly with size. Finally, we discuss the merits and limitations of the point-source model in light of the experiments and point out its broader relevance.
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Affiliation(s)
- Dolachai Boniface
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, F-69622 Villeurbanne, France
| | - Cécile Cottin-Bizonne
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, F-69622 Villeurbanne, France
| | - Ronan Kervil
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, F-69622 Villeurbanne, France
| | - Christophe Ybert
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, F-69622 Villeurbanne, France
| | - François Detcheverry
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, F-69622 Villeurbanne, France
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42
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Huang MJ, Schofield J, Gaspard P, Kapral R. From single particle motion to collective dynamics in Janus motor systems. J Chem Phys 2019; 150:124110. [PMID: 30927899 DOI: 10.1063/1.5081820] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Mu-Jie Huang
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Jeremy Schofield
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Pierre Gaspard
- Center for Nonlinear Phenomena and Complex Systems, Université Libre de Bruxelles (U.L.B.), Code Postal 231, Campus Plaine, B-1050 Brussels, Belgium
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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43
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Popescu MN, Uspal WE, Eskandari Z, Tasinkevych M, Dietrich S. Effective squirmer models for self-phoretic chemically active spherical colloids. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2018; 41:145. [PMID: 30569319 DOI: 10.1140/epje/i2018-11753-1] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2018] [Accepted: 11/09/2018] [Indexed: 05/10/2023]
Abstract
Various aspects of self-motility of chemically active colloids in Newtonian fluids can be captured by simple models for their chemical activity plus a phoretic-slip hydrodynamic boundary condition on their surface. For particles of simple shapes (e.g., spheres) --as employed in many experimental studies-- which move at very low Reynolds numbers in an unbounded fluid, such models of chemically active particles effectively map onto the well studied so-called hydrodynamic squirmers (S. Michelin and E. Lauga, J. Fluid Mech. 747, 572 (2014)). Accordingly, intuitively appealing analogies of "pusher/puller/neutral" squirmers arise naturally. Within the framework of self-diffusiophoresis we illustrate the above-mentioned mapping and the corresponding flows in an unbounded fluid for a number of choices of the activity function (i.e., the spatial distribution and the type of chemical reactions across the surface of the particle). We use the central collision of two active particles as a simple, paradigmatic case for demonstrating that in the presence of other particles or boundaries the behavior of chemically active colloids may be qualitatively different, even in the far field, from the one exhibited by the corresponding "effective squirmer", obtained from the mapping in an unbounded fluid. This emphasizes that understanding the collective behavior and the dynamics under geometrical confinement of chemically active particles necessarily requires to explicitly account for the dependence of the hydrodynamic interactions on the distribution of chemical species resulting from the activity of the particles.
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Affiliation(s)
- M N Popescu
- Max-Planck-Institut für Intelligente Systeme, Heisenbergstr. 3, D-70569, Stuttgart, Germany.
- IV. Institut für Theoretische Physik, Universität Stuttgart, Pfaffenwaldring 57, D-70569, Stuttgart, Germany.
| | - W E Uspal
- Max-Planck-Institut für Intelligente Systeme, Heisenbergstr. 3, D-70569, Stuttgart, Germany
- IV. Institut für Theoretische Physik, Universität Stuttgart, Pfaffenwaldring 57, D-70569, Stuttgart, Germany
| | - Z Eskandari
- Max-Planck-Institut für Intelligente Systeme, Heisenbergstr. 3, D-70569, Stuttgart, Germany
- IV. Institut für Theoretische Physik, Universität Stuttgart, Pfaffenwaldring 57, D-70569, Stuttgart, Germany
| | - M Tasinkevych
- Centro de Física Teórica e Computacional, Departamento de Física, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, P-1749-016, Lisboa, Portugal
| | - S Dietrich
- Max-Planck-Institut für Intelligente Systeme, Heisenbergstr. 3, D-70569, Stuttgart, Germany
- IV. Institut für Theoretische Physik, Universität Stuttgart, Pfaffenwaldring 57, D-70569, Stuttgart, Germany
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44
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Robertson B, Huang MJ, Chen JX, Kapral R. Synthetic Nanomotors: Working Together through Chemistry. Acc Chem Res 2018; 51:2355-2364. [PMID: 30207448 DOI: 10.1021/acs.accounts.8b00239] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Active matter, some of whose constituent elements are active agents that can move autonomously, behaves very differently from matter without such agents. The active agents can self-assemble into structures with a variety of forms and dynamical properties. Swarming, where groups of living agents move cooperatively, is commonly observed in the biological realm, but it is also seen in the physical realm in systems containing small synthetic motors. The existence of diverse forms of self-assembled structures has stimulated the search for new applications that involve active matter. We consider active systems where the agents are synthetic chemically powered motors with various shapes and sizes that operate by phoretic mechanisms, especially self-diffusiophoresis. These motors are able to move autonomously in solution by consuming fuel from their environment. Chemical reactions take place on catalytic portions of the motor surface and give rise to concentration gradients that lead to directed motion. They can operate in this way only if the chemical composition of the system is maintained in a nonequilibrium state since no net fluxes are possible in a system at equilibrium. In contrast to many other active systems, chemistry plays an essential part in determining the properties of the collective dynamics and self-assembly of these chemically powered motor systems. The inhomogeneous concentration fields that result from asymmetric motor reactions are felt by other motors in the system and strongly influence how they move. This chemical coupling effect often dominates other interactions due to fluid flow fields and direct interactions among motors and determines the form that the collective dynamics takes. Since we consider small motors with micrometer and nanometer sizes, thermal fluctuations are strong and cannot be neglected. The media in which the motors operate may not be simple and may contain crowding agents or molecular filaments that influence how the motors assemble and move. The collective motion is also influenced by the chemical gradients that arise from reactions in the surrounding medium. By adopting a microscopic perspective, where the motors, fluid environment, and crowding elements are treated at the coarse-grained molecular level, all of the many-body interactions that give rise to the collective behavior naturally emerge from the molecular dynamics. Through simulations and theory, this Account describes how active matter made from chemically powered nanomotors moving in simple and more complicated media can form different dynamical structures that are strongly influenced by interactions arising from cooperative chemical reactions on the motor surfaces.
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Affiliation(s)
- Bryan Robertson
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Mu-Jie Huang
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Jiang-Xing Chen
- Department of Physics, Hangzhou Dianzi University, Hangzhou 310018, China
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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45
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Abstract
The field of active matter in general and microswimming in particular has experienced a rapid and ongoing expansion over the last decade. A particular interesting aspect is provided by artificial autonomous microswimmers constructed from individual active and inactive functional components into self-propelling complexes. Such modular microswimmers may exhibit directed motion not seen for each individual component. In this review, we focus on the establishment and recent developments in the modular approach to microswimming. We introduce the bound and dynamic prototypes, show mechanisms and types of modular swimming and discuss approaches to control the direction and speed of modular microswimmers. We conclude by highlighting some challenges faced by researchers as well as promising directions for future research in the realm of modular swimming.
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Affiliation(s)
- Ran Niu
- Institut für Physik, Johannes Gutenberg-Universtät Mainz, Staudingerweg 7, 55128 Mainz, Germany.
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46
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Chen J, Chen Y, Kapral R. Chemically Propelled Motors Navigate Chemical Patterns. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2018; 5:1800028. [PMID: 30250781 PMCID: PMC6145410 DOI: 10.1002/advs.201800028] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2018] [Revised: 04/15/2018] [Indexed: 05/06/2023]
Abstract
Very small synthetic motors that use chemical reactions to drive their motion are being studied widely because of their potential applications, which often involve active transport and dynamics on nanoscales. Like biological molecular machines, they must be able to perform their tasks in complex, highly fluctuating environments that can form chemical patterns with diverse structures. Motors in such systems can actively assemble into dynamic clusters and other unique nonequilibrium states. It is shown how chemical patterns with small characteristic dimensions may be utilized to suppress rotational Brownian motions of motors and guide them to move along prescribed paths, properties that can be exploited in applications. In systems with larger pattern length scales, domains can serve as catch basins for motors through chemotactic effects. The resulting collective motor dynamics in such confining domains can be used to explore new aspects of active particle collective dynamics or promote specific types of active self-assembly. More generally, when chemically self-propelled motors operate in far-from-equilibrium active chemical media the variety of possible phenomena and the scope of their potential applications are substantially increased.
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Affiliation(s)
- Jiang‐Xing Chen
- Department of PhysicsHangzhou Dianzi UniversityHangzhou310018China
| | - Yu‐Guo Chen
- Department of PhysicsHangzhou Dianzi UniversityHangzhou310018China
| | - Raymond Kapral
- Chemical Physics Theory GroupDepartment of ChemistryUniversity of TorontoTorontoOntarioM5S 3H6Canada
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47
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Reigh SY, Chuphal P, Thakur S, Kapral R. Diffusiophoretically induced interactions between chemically active and inert particles. SOFT MATTER 2018; 14:6043-6057. [PMID: 29978883 DOI: 10.1039/c8sm01102h] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
In the presence of a chemically active particle, a nearby chemically inert particle can respond to a concentration gradient and move by diffusiophoresis. The nature of the motion is studied for two cases: first, a fixed reactive sphere and a moving inert sphere, and second, freely moving reactive and inert spheres. The continuum reaction-diffusion and Stokes equations are solved analytically for these systems and microscopic simulations of the dynamics are carried out. Although the relative velocities of the spheres are very similar in the two systems, the local and global structures of streamlines and the flow velocity fields are found to be quite different. For freely moving spheres, when the two spheres approach each other the flow generated by the inert sphere through diffusiophoresis drags the reactive sphere towards it. This leads to a self-assembled dimer motor that is able to propel itself in solution. The fluid flow field at the moment of dimer formation changes direction. The ratio of sphere sizes in the dimer influences the characteristics of the flow fields, and this feature suggests that active self-assembly of spherical colloidal particles may be manipulated by sphere-size changes in such reactive systems.
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Affiliation(s)
- Shang Yik Reigh
- Max-Planck-Institut für Intelligente Systeme, Heisenbergstraße 3, 70569 Stuttgart, Germany.
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48
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Huang MJ, Schofield J, Gaspard P, Kapral R. Dynamics of Janus motors with microscopically reversible kinetics. J Chem Phys 2018; 149:024904. [PMID: 30007391 DOI: 10.1063/1.5029344] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Affiliation(s)
- Mu-Jie Huang
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Jeremy Schofield
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Pierre Gaspard
- Center for Nonlinear Phenomena and Complex Systems, Université Libre de Bruxelles (ULB), Code Postal 231, Campus Plaine, B-1050 Brussels, Belgium
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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49
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Gaspard P, Kapral R. Fluctuating chemohydrodynamics and the stochastic motion of self-diffusiophoretic particles. J Chem Phys 2018; 148:134104. [PMID: 29626853 DOI: 10.1063/1.5020442] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The propulsion of active particles by self-diffusiophoresis is driven by asymmetric catalytic reactions on the particle surface that generate a mechanochemical coupling between the fluid velocity and the concentration fields of fuel and product in the surrounding solution. Because of thermal and molecular fluctuations in the solution, the motion of micrometric or submicrometric active particles is stochastic. Coupled Langevin equations describing the translation, rotation, and reaction of such active particles are deduced from fluctuating chemohydrodynamics and fluctuating boundary conditions at the interface between the fluid and the particle. These equations are consistent with microreversibility and the Onsager-Casimir reciprocal relations between affinities and currents and provide a thermodynamically consistent basis for the investigation of the dynamics of active particles propelled by diffusiophoretic mechanisms.
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Affiliation(s)
- Pierre Gaspard
- Center for Nonlinear Phenomena and Complex Systems, Université Libre de Bruxelles, Code Postal 231, Campus Plaine, B-1050 Brussels, Belgium
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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50
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Colberg PH, Kapral R. Many-body dynamics of chemically propelled nanomotors. J Chem Phys 2018; 147:064910. [PMID: 28810764 DOI: 10.1063/1.4997572] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
Abstract
The collective behavior of chemically propelled sphere-dimer motors made from linked catalytic and noncatalytic spheres in a quasi-two-dimensional confined geometry is studied using a coarse-grained microscopic dynamical model. Chemical reactions at the catalytic spheres that convert fuel to product generate forces that couple to solvent degrees of freedom as a consequence of momentum conservation in the microscopic dynamics. The collective behavior of the many-body system is influenced by direct intermolecular interactions among the motors, chemotactic effects due to chemical gradients, hydrodynamic coupling, and thermal noise. Segregation into high and low density phases and globally homogeneous states with strong fluctuations are investigated as functions of the motor characteristics. Factors contributing to this behavior are discussed in the context of active Brownian models.
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Affiliation(s)
- Peter H Colberg
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Raymond Kapral
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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