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Chen HT, Zhou Z, Subotnik JE. On the proper derivation of the Floquet-based quantum classical Liouville equation and surface hopping describing a molecule or material subject to an external field. J Chem Phys 2020; 153:044116. [PMID: 32752688 DOI: 10.1063/5.0013873] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We investigate different approaches to derive the proper Floquet-based quantum-classical Liouville equation (F-QCLE) for laser-driven electron-nuclear dynamics. The first approach projects the operator form of the standard QCLE onto the diabatic Floquet basis and then transforms to the adiabatic representation. The second approach directly projects the QCLE onto the Floquet adiabatic basis. Both approaches yield a form that is similar to the usual QCLE with two modifications: (1) The electronic degrees of freedom are expanded to infinite dimension and (2) the nuclear motion follows Floquet quasi-energy surfaces. However, the second approach includes an additional cross derivative force due to the dual dependence on time and nuclear motion of the Floquet adiabatic states. Our analysis and numerical tests indicate that this cross derivative force is a fictitious artifact, suggesting that one cannot safely exchange the order of Floquet state projection with adiabatic transformation. Our results are in accord with similar findings by Izmaylov et al., [J. Chem. Phys. 140, 084104 (2014)] who found that transforming to the adiabatic representation must always be the last operation applied, although now we have extended this result to a time-dependent Hamiltonian. This paper and the proper derivation of the F-QCLE should lay the basis for further improvements of Floquet surface hopping.
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Affiliation(s)
- Hsing-Ta Chen
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Zeyu Zhou
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Joseph E Subotnik
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
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2
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van den Berg JL, Neumann KI, Harrison JA, Weir H, Hohenstein EG, Martinez TJ, Zare RN. Strong, Nonresonant Radiation Enhances Cis- Trans Photoisomerization of Stilbene in Solution. J Phys Chem A 2020; 124:5999-6008. [PMID: 32585098 DOI: 10.1021/acs.jpca.0c02732] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Previously, it has been demonstrated that external electric fields may be used to exert control over chemical reactivity. In this study, the impact of a strong, nonresonant IR field (1064 nm) on the photoisomerization of cis-stilbene is investigated in cyclohexane solution. The design of a suitable reaction vessel for characterization of this effect is presented. The electric field supplied by the pulsed, near-IR radiation (εl = 4.5 × 107 V/cm) enhances the cis → trans photoisomerization yield at the red edge of the absorption spectrum (wavelengths between 337 and 340 nm). Within the microliter focal volume, up to 75% of all cis-stilbene molecules undergo isomerization to trans-stilbene in the strong electric-field environment, indicating a significant increase relative to the 35% yield of trans-stilbene under field-free conditions. This result correlates with a 1-3% enhancement in the trans-stilbene concentration throughout the bulk solution. Theoretical analysis suggests that the observed change is the result of dynamic Stark shifting of the ground and first excited states, leading to a significant redshift in cis-stilbene's absorption spectrum. The predicted increase in the absorption cross section in this range of excitation wavelengths is qualitatively consistent with the experimental increase in trans-stilbene production.
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Affiliation(s)
- Jana L van den Berg
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Kallie Ilene Neumann
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - John A Harrison
- Department of Chemistry, Stanford University, Stanford, California 94305, United States.,Chemistry, School of Natural and Computational Sciences, Massey University Auckland, Private Bag 102904, Auckland 4442, New Zealand
| | - Hayley Weir
- Department of Chemistry, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Edward G Hohenstein
- SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Todd J Martinez
- Department of Chemistry, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Richard N Zare
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
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3
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Zhou Z, Chen HT, Nitzan A, Subotnik JE. Nonadiabatic Dynamics in a Laser Field: Using Floquet Fewest Switches Surface Hopping To Calculate Electronic Populations for Slow Nuclear Velocities. J Chem Theory Comput 2020; 16:821-834. [PMID: 31951404 DOI: 10.1021/acs.jctc.9b00950] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
We investigate two well-known approaches for extending the fewest switches surface hopping (FSSH) algorithm to periodic time-dependent couplings. The first formalism acts as if the instantaneous adiabatic electronic states were standard adiabatic states, which just happen to evolve in time. The second formalism replaces the role of the usual adiabatic states by the time-independent adiabatic Floquet states. For a set of modified Tully model problems, the Floquet FSSH (F-FSSH) formalism gives a better estimate for both transmission and reflection probabilities than the instantaneous adiabatic FSSH (IA-FSSH) formalism, especially for slow nuclear velocities. More importantly, only F-FSSH predicts the correct final scattering momentum. Finally, in order to use Floquet theory accurately, we find that it is crucial to account for the interference between wavepackets on different Floquet states. Our results should be of interest to all those interested in laser-induced molecular dynamics.
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Affiliation(s)
- Zeyu Zhou
- Department of Chemistry , University of Pennsylvania , Philadelphia , Pennsylvania 19104 , United States
| | - Hsing-Ta Chen
- Department of Chemistry , University of Pennsylvania , Philadelphia , Pennsylvania 19104 , United States
| | - Abraham Nitzan
- Department of Chemistry , University of Pennsylvania , Philadelphia , Pennsylvania 19104 , United States
| | - Joseph Eli Subotnik
- Department of Chemistry , University of Pennsylvania , Philadelphia , Pennsylvania 19104 , United States
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4
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Hilsabeck KI, Meiser JL, Sneha M, Balakrishnan N, Zare RN. Photon catalysis of deuterium iodide photodissociation. Phys Chem Chem Phys 2019; 21:14195-14204. [DOI: 10.1039/c8cp06107f] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The photodissociation of deuterium iodide is catalyzed by the electric field supplied by nonresonant IR photons.
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Affiliation(s)
| | | | - Mahima Sneha
- Department of Chemistry
- Stanford University
- Stanford
- USA
| | - N. Balakrishnan
- Department of Chemistry and Biochemistry
- University of Nevada
- Las Vegas
- USA
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5
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Deng M, Wang H, Wang Q, Yin J. Dependences of Q-branch integrated intensity of linear-molecule pendular spectra on electric-field strength and rotational temperature and its potential applications. Sci Rep 2016; 6:26776. [PMID: 27231057 PMCID: PMC4882541 DOI: 10.1038/srep26776] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2016] [Accepted: 05/06/2016] [Indexed: 12/19/2022] Open
Abstract
We calculate the pendular-state spectra of cold linear molecules, and investigated the dependences of “Q-branch” integrated intensity of pendular spectra on both electric-field strength and molecular rotation-temperature. A new multi-peak structure in the “Q-branch” spectrum is appearing when the Stark interaction strength ω = μE/B equal to or larger than the critical value. Our study shows that the above results can be used not only to measure the electric-field vector and its spatial distribution in some electrostatic devices, such as the Stark decelerator, Stark velocity filter and electrostatic trap and so on, but also to survey the orientation degree of cold linear molecules in a strong electrostatic field.
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Affiliation(s)
- Min Deng
- State Key Laboratory of Precision Spectroscopy, Department of Physics, East China Normal University, Shanghai 200062, P. R. China
| | - Hailing Wang
- State Key Laboratory of Precision Spectroscopy, Department of Physics, East China Normal University, Shanghai 200062, P. R. China
| | - Qin Wang
- State Key Laboratory of Precision Spectroscopy, Department of Physics, East China Normal University, Shanghai 200062, P. R. China
| | - Jianping Yin
- State Key Laboratory of Precision Spectroscopy, Department of Physics, East China Normal University, Shanghai 200062, P. R. China
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6
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Hernandez FJ, Brice JT, Leavitt CM, Liang T, Raston PL, Pino GA, Douberly GE. Mid-infrared signatures of hydroxyl containing water clusters: Infrared laser Stark spectroscopy of OH–H2O and OH(D2O)n (n = 1-3). J Chem Phys 2015; 143:164304. [DOI: 10.1063/1.4933432] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Federico J. Hernandez
- Department of Chemistry, University of Georgia, Athens, Georgia 30602, USA
- INFIQC, Dpto. de Fisicoquímica, Facultad de Ciencias Químicas, Centro Láser de Ciencias Moleculares, Universidad Nacional de Córdoba, Ciudad Universitaria, Pabellón, X5000HUA Córdoba, Argentina
| | - Joseph T. Brice
- Department of Chemistry, University of Georgia, Athens, Georgia 30602, USA
| | | | - Tao Liang
- Department of Chemistry, University of Georgia, Athens, Georgia 30602, USA
| | - Paul L. Raston
- Department of Chemistry and Biochemistry, James Madison University, Harrisonburg, Virginia 22807, USA
| | - Gustavo A. Pino
- INFIQC, Dpto. de Fisicoquímica, Facultad de Ciencias Químicas, Centro Láser de Ciencias Moleculares, Universidad Nacional de Córdoba, Ciudad Universitaria, Pabellón, X5000HUA Córdoba, Argentina
| | - Gary E. Douberly
- Department of Chemistry, University of Georgia, Athens, Georgia 30602, USA
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7
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Leavitt CM, Moore KB, Raston PL, Agarwal J, Moody GH, Shirley CC, Schaefer HF, Douberly GE. Liquid Hot NAGMA Cooled to 0.4 K: Benchmark Thermochemistry of a Gas-Phase Peptide. J Phys Chem A 2014; 118:9692-700. [DOI: 10.1021/jp5092653] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | | | - Paul L. Raston
- Department
of Chemistry, University of Adelaide, Adelaide, SA 5005, Australia
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8
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Obi EI, Leavitt CM, Raston PL, Moradi CP, Flynn SD, Vaghjiani GL, Boatz JA, Chambreau SD, Douberly GE. Helium Nanodroplet Isolation and Infrared Spectroscopy of the Isolated Ion-Pair 1-Ethyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide. J Phys Chem A 2013; 117:9047-56. [DOI: 10.1021/jp4078322] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Emmanuel I. Obi
- Department
of Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | | | - Paul L. Raston
- Department
of Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | - Christopher P. Moradi
- Department
of Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | - Steven D. Flynn
- Department
of Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | | | - Jerry A. Boatz
- Air Force Research Laboratory, Edwards Air
Force Base, California 93524, United States
| | | | - Gary E. Douberly
- Department
of Chemistry, University of Georgia, Athens, Georgia 30602, United States
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9
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Affiliation(s)
- Mikhail Lemeshko
- a ITAMP, Harvard-Smithsonian Center for Astrophysics , Cambridge , MA , 02138 , USA
- b Physics Department , Harvard University , Cambridge , MA , 02138 , USA
- c Kavli Institute for Theoretical Physics , University of California , Santa Barbara , CA , 93106 , USA
| | - Roman V. Krems
- c Kavli Institute for Theoretical Physics , University of California , Santa Barbara , CA , 93106 , USA
- d Department of Chemistry , University of British Columbia , BC V6T 1Z1, Vancouver , Canada
| | - John M. Doyle
- b Physics Department , Harvard University , Cambridge , MA , 02138 , USA
| | - Sabre Kais
- e Departments of Chemistry and Physics , Purdue University , West Lafayette , IN , 47907 , USA
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Lee SK, Lee SJ, Ahn AR, Kim YS, Min AR, Choi MY, Miller RE. Infrared Spectroscopy of Imidazole Trimer in Helium Nanodroplets: Free NH Stretch Mode. B KOREAN CHEM SOC 2011. [DOI: 10.5012/bkcs.2011.32.3.885] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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11
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Morrison AM, Flynn SD, Liang T, Douberly GE. Infrared Spectroscopy of (HCl)m(H2O)n Clusters in Helium Nanodroplets: Definitive Assignments in the HCl Stretch Region. J Phys Chem A 2010; 114:8090-8. [DOI: 10.1021/jp104545j] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
| | - Steven D. Flynn
- Department of Chemistry, University of Georgia, Athens, Georgia 30602-2556
| | - Tao Liang
- Department of Chemistry, University of Georgia, Athens, Georgia 30602-2556
| | - Gary E. Douberly
- Department of Chemistry, University of Georgia, Athens, Georgia 30602-2556
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12
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Choi MY, Miller RE. Imidazole dimer and its water complexes formed in superfluid helium nanodroplets: Infrared spectroscopic studies of free OH vibrational stretching modes. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.07.032] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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13
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Lee SJ, Choi MY, Miller RE. Vibrational spectroscopy of xanthine in superfluid helium nanodroplets. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.05.016] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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14
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Choi MY, Dong F, Han SW, Miller RE. Nonplanarity of Adenine: Vibrational Transition Moment Angle Studies in Helium Nanodroplets. J Phys Chem A 2008; 112:7185-90. [DOI: 10.1021/jp8012688] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Myong Yong Choi
- Department of Chemistry and Research Institute of Natural Science, Gyeongsang National University, Jinju 660-701, Korea, and Department of Chemistry, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599
| | - Feng Dong
- Department of Chemistry and Research Institute of Natural Science, Gyeongsang National University, Jinju 660-701, Korea, and Department of Chemistry, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599
| | - Sang Woo Han
- Department of Chemistry and Research Institute of Natural Science, Gyeongsang National University, Jinju 660-701, Korea, and Department of Chemistry, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599
| | - Roger E. Miller
- Department of Chemistry and Research Institute of Natural Science, Gyeongsang National University, Jinju 660-701, Korea, and Department of Chemistry, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599
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15
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Pei L, Zhang J, Kong W. Electronic polarization spectroscopy of metal phthalocyanine chloride compounds in superfluid helium droplets. J Chem Phys 2008; 127:174308. [PMID: 17994819 DOI: 10.1063/1.2803186] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We report the electronic polarization spectroscopy of two metal phthalocyanine chloride compounds (MPcCl, M=Al,Ga) embedded in superfluid helium droplets and oriented in a dc electric field. For both compounds, the laser induced fluorescence spectra show preference for perpendicular excitation relative to the orientation field. This result indicates that the permanent dipoles of both compounds are predominantly perpendicular to the transition dipole. Since the permanent dipole derives from the metal chloride, while the transition dipole derives from the phthalocyanine chromophore, in the plane of phthalocyanine, this qualitative result is not surprising. However, quantitative modeling reveals that this intuitive model is inadequate and that the transition dipole might have tilted away from the molecular plane of phthalocyanine. The out of plane component of the transition dipole amounts to approximately 10% if the permanent dipole is assumed to be approximately 4 debye. The origin for this tilt is puzzling, and we tentatively attribute it to the transition of nonbonding orbitals, either from the chlorine atom or from the bridge nitrogen atom, to the pi* orbitals of the phthalocyanine chromophore. On the other hand, although unlikely, we cannot completely exclude the possibility that both our high level density functional theory calculation and ab initio results severely deviate from reality. The droplet matrix induces redshifts in the origin of the electronic transition and produces discrete phonon wings. Nevertheless, in dc electric fields, all phonon wings and the zero phonon line demonstrate the same dependence on the polarization direction of the excitation laser. Although electronic excitation does couple to the superfluid helium matrix and the resulting phonon wings add complications to the electronic spectrum, this coupling does not affect the direction of the electronic transition dipole. Electronic polarization spectroscopy in superfluid helium droplets is thus still informative in revealing the permanent dipole and its relation relative to the transition dipole.
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Affiliation(s)
- Linsen Pei
- Department of Chemistry, Oregon State University, Corvallis, Oregon 97331-4003, USA
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16
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Choi MY, Miller RE. Infrared Laser Spectroscopy of Uracil and Thymine in Helium Nanodroplets: Vibrational Transition Moment Angle Study. J Phys Chem A 2007; 111:2475-9. [PMID: 17388352 DOI: 10.1021/jp0674625] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Vibrational spectra are reported in the N-H stretching region for uracil and thymine monomers in helium nanodroplets. Each monomer shows only a single isomer, the global minimum, in agreement with previous experimental and theoretical studies. The assignment of the infrared vibrational bands in the spectra is aided by the measurement of the corresponding vibrational transition moment angles (VTMAs) and ab initio frequency calculations. The ambiguity in the VTMA assignment of the N3H band for the uracil monomer is explained by the presence of dimer bands, which are overlapped with the monomer band.
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Affiliation(s)
- Myong Yong Choi
- Department of Chemistry, The University of North Carolina at Chapel Hill, North Carolina 27599, USA.
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17
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Pei L, Zhang J, Wu C, Kong W. Conformational identification of tryptamine embedded in superfluid helium droplets using electronic polarization spectroscopy. J Chem Phys 2006; 125:24305. [PMID: 16848582 DOI: 10.1063/1.2217948] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We report electronic polarization spectroscopy of tryptamine embedded in superfluid helium droplets. In a dc electric field, dependence of laser induced fluorescence from tryptamine on the polarization direction of the excitation laser is measured. Among the three observed major conformers A, D, and E, conformers D and E display preference for perpendicular excitation relative to the orientation field, while conformer A is insensitive to the polarization direction of the excitation laser. We attribute the behavior of conformer A to the fact that the angle between the permanent dipole and the transition dipole is close to the magic angle. Using a linear variation method, we can reproduce the polarization preference of the three conformers and determine the angle between the transition dipole and the permanent dipole. Since the side chain exerts small effect on the direction of the transition dipole in the frame of the indole chromophore, all three conformers have a common transition dipole more or less in the indole plane at an angle of approximately 60 degrees relative to the long axis of the chromophore. The orientation of the side chain, on the other hand, determines the size and direction of the permanent dipole, thereby affecting the angle between the permanent dipole and the transition dipole. For conformer D in the droplet, our results agree with the Anti(ph) structure, rather than the Anti(py) structure. Our work demonstrates that polarization spectroscopy is effective in conformational identification for molecules that contain a known chromophore. Although coupling of the electronic transition with the helium matrix is not negligible, it does not affect the direction of the transition dipole.
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Affiliation(s)
- Linsen Pei
- Department of Chemistry, Oregon State University, Corvallis, OR 97331, USA
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18
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Choi MY, Miller RE. Infrared Laser Spectroscopy of Imidazole Complexes in Helium Nanodroplets: Monomer, Dimer, and Binary Water Complexes. J Phys Chem A 2006; 110:9344-51. [PMID: 16869682 DOI: 10.1021/jp0624146] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Infrared laser spectroscopy has been used to characterize imidazole (IM), imidazole dimer (IMD), and imidazole-water (IMW) binary systems formed in helium nanodroplets. The experimental results are compared with ab initio calculations reported here. Vibrational transition moment angles provide conclusive assignments for the various complexes studied here, including IM, one isomer of IMD, and two isomers of the IMW binary complexes.
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Affiliation(s)
- Myong Yong Choi
- Department of Chemistry, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
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19
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Choi MY, Miller RE. Four Tautomers of Isolated Guanine from Infrared Laser Spectroscopy in Helium Nanodroplets. J Am Chem Soc 2006; 128:7320-8. [PMID: 16734487 DOI: 10.1021/ja060741l] [Citation(s) in RCA: 130] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Infrared laser spectroscopy is used to study the four lowest energy tautomers of guanine, isolated in helium nanodroplets. The large number of vibrational bands observed in the infrared spectrum are assigned by comparing the corresponding experimental vibrational transition moment angles with those obtained from ab initio theory. The result is the conclusive assignment of the spectrum to the N9H-Keto, N7H-Keto, N9Ha-Enol(trans), and N9Hb-Enol(cis) tautomers. The dipole moments of these tautomers are also experimentally determined and compared with ab initio theory.
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Affiliation(s)
- Myong Yong Choi
- Department of Chemistry, The University of North Carolina, Chapel Hill, North Carolina 27599, USA.
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20
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Choi MY, Douberly GE, Falconer TM, Lewis WK, Lindsay CM, Merritt JM, Stiles PL, Miller RE. Infrared spectroscopy of helium nanodroplets: novel methods for physics and chemistry. INT REV PHYS CHEM 2006. [DOI: 10.1080/01442350600625092] [Citation(s) in RCA: 327] [Impact Index Per Article: 18.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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21
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Choi MY, Dong F, Miller RE. Multiple tautomers of cytosine identified and characterized by infrared laser spectroscopy in helium nanodroplets: probing structure using vibrational transition moment angles. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2005; 363:393-413. [PMID: 15664890 DOI: 10.1098/rsta.2004.1499] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Infrared laser spectroscopy in helium nanodroplets is used to identify and characterize several distinct tautomers of cytosine. The experimentally observed species correspond to the lowest-energy structures obtained from ab initio calculations, also reported here. The assignment of the infrared vibrational bands in the spectra is aided by the measurement of the corresponding vibrational transition moment angles, which are also calculated using ab initio methods. In the present study we confirm the existence of three primary tautomers and provide tentative assignments for even higher-energy forms of cytosine in helium nanodroplets.
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Affiliation(s)
- M Y Choi
- Department of Chemistry, University of North Carolina, Chapel Hill, NC 27599, USA
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22
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Choi MY, Miller RE. Multiple isomers of uracil–water complexes: infrared spectroscopy in helium nanodroplets. Phys Chem Chem Phys 2005; 7:3565-73. [PMID: 16294232 DOI: 10.1039/b507100c] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Infrared laser spectroscopy is used to show that four structural isomers of the uracil-water binary complex are formed in helium nanodroplets. The assignment of the infrared spectra is aided by measurements of vibrational transition moment angles (VTMAs) for various vibrational modes of these complexes. The experimental results are in excellent agreement with ab initio calculations, which had previously predicated the existence of the same four isomers. The results suggest that the relative abundances of the various isomers formed in helium droplets have more to do with the widths of the valleys in the potential surface that funnel into a particular local minimum than on the associated energetics.
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Affiliation(s)
- M Y Choi
- Department of Chemistry, University of North Carolina, Chapel Hill, NC 27599, USA
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23
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Kanya R, Ohshima Y. Pendular-state spectroscopy of the S1–S0 electronic transition of 9-cyanoanthracene. J Chem Phys 2004; 121:9489-97. [PMID: 15538870 DOI: 10.1063/1.1806420] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Fluorescence excitation spectra of the S(1)-S(0) origin band of 9-cyanoanthracene have been observed under a uniform electric field up to 200 kV/cm to explore pendular-state spectrum of an asymmetric-top molecule close to the strong field limit. The observed spectra exhibit distinct evolution of the band contour as a function of the applied electric field, which are much different from each other for different excitation configurations. An approximate method suitable for spectrum simulations of large asymmetric-top molecules in a pendular condition is developed for the analysis of the experimental results. The comparison of the observed and simulated spectra shows that the spectra are well ascribed in terms of the pendular-state selection rules, which have recently been derived from theoretical consideration of the pendular-limit representation of energy levels and spectra.
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Affiliation(s)
- Reika Kanya
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-ku, Kyoto 606-8502, Japan
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Wu C, He Y, Kong W. Polarization spectroscopy of gaseous tropolone in a strong electric field. J Chem Phys 2004; 121:4577-84. [PMID: 15332888 DOI: 10.1063/1.1780166] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We report studies of polarization spectroscopy of gaseous tropolone in a strong electric field using resonantly enhanced multiphoton ionization. The electric field induces localization of the tunneling proton between the two equivalent oxygen atoms. As a result, the C2v symmetry of the molecular frame is broken, and the parity selection rule is violated. The field induced transitions are type A with transition dipoles perpendicular to those under field free conditions. The polarization ratios, i.e., the ratios of the overall excitation yield under different polarizations of the resonant laser, thus deviate from those of a pure type B transition. In a field of 60 kV/cm, the experimental polarization ratio implies an essentially equal mixture of type B and type A transitions. Moreover, the induced transitions overlap with the two field-free subbands, and the resulting intensity ratios between the two subbands demonstrate dependence on the applied electric field. These observations can be qualitatively modeled using a quantum mechanical approach by assuming a two level system. A puzzling result is the magnitude of the transition dipole of the induced transition, which is proven to be essentially linearly dependent on the applied electric field.
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Affiliation(s)
- Chengyin Wu
- Department of Chemistry, Oregon State University, Corvallis, Oregon 97331-4003, USA
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He Y, Wu C, Kong W. Two-color two-photon REMPI and ZEKE photoelectron spectroscopy of jet-cooled 2-chloropyrimidine. Chem Phys Lett 2004. [DOI: 10.1016/j.cplett.2004.04.063] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Douberly GE, Miller RE. The Growth of HF Polymers in Helium Nanodroplets: Probing the Barriers to Ring Insertion. J Phys Chem B 2003. [DOI: 10.1021/jp022360+] [Citation(s) in RCA: 57] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Determination of dipole moment change on the electronic excitation of isolated Coumarin 153 by pendular-state spectroscopy. Chem Phys Lett 2003. [DOI: 10.1016/s0009-2614(03)00075-7] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Abbott JE, Peng X, Kong W. Symmetry properties of electronically excited states of nitroaromatic compounds. J Chem Phys 2002. [DOI: 10.1063/1.1513992] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Castle KJ, Abbott JE, Peng X, Kong W. Photodissociation of o-Nitrotoluene between 220 and 250 nm in a Uniform Electric Field. J Phys Chem A 2000. [DOI: 10.1021/jp0009150] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Karen J. Castle
- Department of Chemistry, Oregon State University, Corvallis, Oregon 97331-4003
| | - James E. Abbott
- Department of Chemistry, Oregon State University, Corvallis, Oregon 97331-4003
| | - Xianzhao Peng
- Department of Chemistry, Oregon State University, Corvallis, Oregon 97331-4003
| | - Wei Kong
- Department of Chemistry, Oregon State University, Corvallis, Oregon 97331-4003
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Castle KJ, Abbott J, Peng X, Kong W. Direction of the transition dipole moment of nitrobenzene determined from oriented molecules in a uniform electric field. J Chem Phys 2000. [DOI: 10.1063/1.481931] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Castle KJ, Kong W. Directions of transition dipole moments of t-butyl nitrite obtained via orientation with a strong, uniform electric field. J Chem Phys 2000. [DOI: 10.1063/1.481656] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Kong W, Bulthuis J. Orientation of Asymmetric Top Molecules in a Uniform Electric Field: Calculations for Species without Symmetry Axes. J Phys Chem A 2000. [DOI: 10.1021/jp993549x] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Wei Kong
- Department of Chemistry, Oregon State University, Corvallis, Oregon 97331-4003
| | - Jaap Bulthuis
- Department of Chemical Physics and Laser Center, Vrije Universiteit, de Boelelaan 1083, 1081 HV Amsterdam, The Netherlands
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Friedrich B, Herschbach. Manipulating Molecules via Combined Static and Laser Fields. J Phys Chem A 1999. [DOI: 10.1021/jp992131w] [Citation(s) in RCA: 173] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bretislav Friedrich
- Department of Chemistry and Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, Massachusetts 02138
| | - Herschbach
- Department of Chemistry and Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, Massachusetts 02138
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