1
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Liu XY, Wang SR, Fang WH, Cui G. Nuclear Quantum Effects on Nonadiabatic Dynamics of a Green Fluorescent Protein Chromophore Analogue: Ring-Polymer Surface-Hopping Simulation. J Chem Theory Comput 2024; 20:3426-3439. [PMID: 38656202 DOI: 10.1021/acs.jctc.4c00068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
Herein, we have used the "on-the-fly" ring-polymer surface-hopping simulation method with the centroid approximation (RPSH-CA), in combination with the multireference OM2/MRCI electronic structure calculations to study the photoinduced dynamics of a green fluorescent protein (GFP) chromophore analogue in the gas phase, i.e., o-HBI, at 50, 100, and 300 K with 1, 5, 10, and 15 beads (3600 1 ps trajectories). The electronic structure calculations identified five new minimum-energy conical intersection (MECI) structures, which, together with the previous one, play crucial roles in the excited-state decay dynamics of o-HBI. It is also found that the excited-state intramolecular proton transfer (ESIPT) occurs in an ultrafast manner and is completed within 20 fs in all the simulation conditions because there is no barrier associated with this ESIPT process in the S1 state. However, the other excited-state dynamical results are strongly related to the number of beads. At 50 and 100 K, the nuclear quantum effects (NQEs) are very important; therefore, the excited-state dynamical results change significantly with the bead number. For example, the S1 decay time deduced from time-dependent state populations becomes longer as the bead number increases. Nevertheless, an essentially convergent trend is observed when the bead number is close to 10. In contrast, at 300 K, the NQEs become weaker and the above dynamical results converge very quickly even with 1 bead. Most importantly, the NQEs seriously affect the excited-state decay mechanism of o-HBI. At 50 and 100 K, most trajectories decay to the S0 state via perpendicular keto MECIs, whereas, at 300 K, only twisted keto MECIs are responsible for the excited-state decay. The present work not only comprehensively explores the temperature-dependent photoinduced dynamics of o-HBI, but also demonstrates the importance and necessity of NQEs in nonadiabatic dynamics simulations, especially at relatively low temperatures.
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Affiliation(s)
- Xiang-Yang Liu
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Sheng-Rui Wang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Wei-Hai Fang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China
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2
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Kang M, Nuomin H, Chowdhury SN, Yuly JL, Sun K, Whitlow J, Valdiviezo J, Zhang Z, Zhang P, Beratan DN, Brown KR. Seeking a quantum advantage with trapped-ion quantum simulations of condensed-phase chemical dynamics. Nat Rev Chem 2024; 8:340-358. [PMID: 38641733 DOI: 10.1038/s41570-024-00595-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/07/2024] [Indexed: 04/21/2024]
Abstract
Simulating the quantum dynamics of molecules in the condensed phase represents a longstanding challenge in chemistry. Trapped-ion quantum systems may serve as a platform for the analog-quantum simulation of chemical dynamics that is beyond the reach of current classical-digital simulation. To identify a 'quantum advantage' for these simulations, performance analysis of both analog-quantum simulation on noisy hardware and classical-digital algorithms is needed. In this Review, we make a comparison between a noisy analog trapped-ion simulator and a few choice classical-digital methods on simulating the dynamics of a model molecular Hamiltonian with linear vibronic coupling. We describe several simple Hamiltonians that are commonly used to model molecular systems, which can be simulated with existing or emerging trapped-ion hardware. These Hamiltonians may serve as stepping stones towards the use of trapped-ion simulators for systems beyond the reach of classical-digital methods. Finally, we identify dynamical regimes in which classical-digital simulations seem to have the weakest performance with respect to analog-quantum simulations. These regimes may provide the lowest hanging fruit to make the most of potential quantum advantages.
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Affiliation(s)
- Mingyu Kang
- Duke Quantum Center, Duke University, Durham, NC, USA.
- Department of Physics, Duke University, Durham, NC, USA.
| | - Hanggai Nuomin
- Department of Chemistry, Duke University, Durham, NC, USA
| | | | - Jonathon L Yuly
- Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA
| | - Ke Sun
- Duke Quantum Center, Duke University, Durham, NC, USA
- Department of Physics, Duke University, Durham, NC, USA
| | - Jacob Whitlow
- Duke Quantum Center, Duke University, Durham, NC, USA
- Department of Electrical and Computer Engineering, Duke University, Durham, NC, USA
| | - Jesús Valdiviezo
- Kenneth S. Pitzer Theory Center, University of California, Berkeley, CA, USA
- Department of Chemistry, University of California, Berkeley, CA, USA
- Departamento de Ciencias, Sección Química, Pontificia Universidad Católica del Perú, Lima, Peru
| | - Zhendian Zhang
- Department of Chemistry, Duke University, Durham, NC, USA
| | - Peng Zhang
- Department of Chemistry, Duke University, Durham, NC, USA
| | - David N Beratan
- Department of Physics, Duke University, Durham, NC, USA.
- Department of Chemistry, Duke University, Durham, NC, USA.
- Department of Biochemistry, Duke University, Durham, NC, USA.
| | - Kenneth R Brown
- Duke Quantum Center, Duke University, Durham, NC, USA.
- Department of Physics, Duke University, Durham, NC, USA.
- Department of Chemistry, Duke University, Durham, NC, USA.
- Department of Electrical and Computer Engineering, Duke University, Durham, NC, USA.
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3
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London N, Limbu DK, Momeni MR, Shakib FA. DL_POLY Quantum 2.0: A modular general-purpose software for advanced path integral simulations. J Chem Phys 2024; 160:132501. [PMID: 38557837 DOI: 10.1063/5.0197822] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2024] [Accepted: 03/12/2024] [Indexed: 04/04/2024] Open
Abstract
DL_POLY Quantum 2.0, a vastly expanded software based on DL_POLY Classic 1.10, is a highly parallelized computational suite written in FORTRAN77 with a modular structure for incorporating nuclear quantum effects into large-scale/long-time molecular dynamics simulations. This is achieved by presenting users with a wide selection of state-of-the-art dynamics methods that utilize the isomorphism between a classical ring polymer and Feynman's path integral formalism of quantum mechanics. The flexible and user-friendly input/output handling system allows the control of methodology, integration schemes, and thermostatting. DL_POLY Quantum is equipped with a module specifically assigned for calculating correlation functions and printing out the values for sought-after quantities, such as dipole moments and center-of-mass velocities, with packaged tools for calculating infrared absorption spectra and diffusion coefficients.
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Affiliation(s)
- Nathan London
- Division of Energy, Matter and Systems, School of Science and Engineering, University of Missouri-Kansas City, Kansas City, Missouri 64110, USA
| | - Dil K Limbu
- Division of Energy, Matter and Systems, School of Science and Engineering, University of Missouri-Kansas City, Kansas City, Missouri 64110, USA
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, USA
| | - Mohammad R Momeni
- Division of Energy, Matter and Systems, School of Science and Engineering, University of Missouri-Kansas City, Kansas City, Missouri 64110, USA
| | - Farnaz A Shakib
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, USA
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4
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Bi RH, Dou W. Electronic friction near metal surface: Incorporating nuclear quantum effect with ring polymer molecular dynamics. J Chem Phys 2024; 160:074110. [PMID: 38380747 DOI: 10.1063/5.0187646] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Accepted: 01/25/2024] [Indexed: 02/22/2024] Open
Abstract
The molecular dynamics with electronic friction (MDEF) approach can accurately describe nonadiabatic effects at metal surfaces in the weakly nonadiabatic limit. That being said, the MDEF approach treats nuclear motion classically such that the nuclear quantum effects are completely missing in the approach. To address this limitation, we combine Electronic Friction with Ring Polymer Molecular Dynamics (EF-RPMD). In particular, we apply the averaged electronic friction from the metal surface to the centroid mode of the ring polymer. We benchmark our approach against quantum dynamics to show that EF-RPMD can accurately capture zero-point energy as well as transition dynamics. In addition, we show that EF-RPMD can correctly predict the electronic transfer rate near metal surfaces in the tunneling limit as well as the barrier crossing limit. We expect that our approach will be very useful to study nonadiabatic dynamics near metal surfaces when nuclear quantum effects become essential.
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Affiliation(s)
- Rui-Hao Bi
- Department of Chemistry, School of Science, Westlake University, Hangzhou, Zhejiang 310024, China
- Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou, Zhejiang 310024, China
| | - Wenjie Dou
- Department of Chemistry, School of Science, Westlake University, Hangzhou, Zhejiang 310024, China
- Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou, Zhejiang 310024, China
- Department of Physics, School of Science, Westlake University, Hangzhou, Zhejiang 310024, China
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5
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Lawrence JE, Mannouch JR, Richardson JO. Recovering Marcus Theory Rates and Beyond without the Need for Decoherence Corrections: The Mapping Approach to Surface Hopping. J Phys Chem Lett 2024; 15:707-716. [PMID: 38214476 PMCID: PMC10823533 DOI: 10.1021/acs.jpclett.3c03197] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Revised: 12/22/2023] [Accepted: 01/05/2024] [Indexed: 01/13/2024]
Abstract
It is well-known that fewest-switches surface hopping (FSSH) fails to correctly capture the quadratic scaling of rate constants with diabatic coupling in the weak-coupling limit, as expected from Fermi's golden rule and Marcus theory. To address this deficiency, the most widely used approach is to introduce a "decoherence correction", which removes the inconsistency between the wave function coefficients and the active state. Here we investigate the behavior of a new nonadiabatic trajectory method, called the mapping approach to surface hopping (MASH), on systems that exhibit an incoherent rate behavior. Unlike FSSH, MASH hops between active surfaces deterministically and can never have an inconsistency between the wave function coefficients and the active state. We show that MASH not only can describe rates for intermediate and strong diabatic coupling but also can accurately reproduce the results of Marcus theory in the golden-rule limit, without the need for a decoherence correction. MASH is therefore a significant improvement over FSSH in the simulation of nonadiabatic reactions.
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Affiliation(s)
- Joseph E. Lawrence
- Department
of Chemistry and Applied Biosciences, ETH
Zurich, 8093 Zurich, Switzerland
| | - Jonathan R. Mannouch
- Hamburg
Center for Ultrafast Imaging, Universität
Hamburg and Max Planck Institute for the Structure and Dynamics of
Matter, Luruper Chaussee 149, 22761 Hamburg, Germany
| | - Jeremy O. Richardson
- Department
of Chemistry and Applied Biosciences, ETH
Zurich, 8093 Zurich, Switzerland
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6
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Huang DM, Green AT, Martens CC. A first principles derivation of energy-conserving momentum jumps in surface hopping simulations. J Chem Phys 2023; 159:214108. [PMID: 38047505 DOI: 10.1063/5.0178534] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Accepted: 11/06/2023] [Indexed: 12/05/2023] Open
Abstract
The fewest switches surface hopping (FSSH) method proposed by Tully in 1990 [Tully, J. Chem. Phys. 93, 1061 (1990)]-along with its many later variations-forms the basis for most practical simulations of molecular dynamics with electronic transitions in realistic systems. Despite its popularity, a rigorous formal derivation of the algorithm has yet to be achieved. In this paper, we derive the energy-conserving momentum jumps employed by FSSH from the perspective of quantum trajectory surface hopping (QTSH) [Martens, J. Phys. Chem. A 123, 1110 (2019)]. In the limit of localized nonadiabatic transitions, simple mathematical and physical arguments allow the FSSH algorithm to be derived from first principles. For general processes, the quantum forces characterizing the QTSH method provide accurate results for nonadiabatic dynamics with rigorous energy conservation, at the ensemble level, within the consistency of the underlying stochastic surface hopping without resorting to the artificial momentum rescaling of FSSH.
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Affiliation(s)
| | - Austin T Green
- University of California, Irvine, California 92697-2025, USA
| | - Craig C Martens
- University of California, Irvine, California 92697-2025, USA
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7
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Green AT, Martens CC. Zombie cats on the quantum-classical frontier: Wigner-Moyal and semiclassical limit dynamics of quantum coherence in molecules. J Chem Phys 2023; 159:204102. [PMID: 37991156 DOI: 10.1063/5.0177421] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Accepted: 11/02/2023] [Indexed: 11/23/2023] Open
Abstract
In this paper, we investigate the time evolution of quantum coherence-the off-diagonal elements of the density matrix of a multistate quantum system-from the perspective of the Wigner-Moyal formalism. This approach provides an exact phase space representation of quantum mechanics. We consider the coherent evolution of nuclear wavepackets in a molecule with two electronic states. For harmonic potentials, the problem is analytically soluble for both a fully quantum mechanical description and a semiclassical description. We highlight the serious deficiencies of the semiclassical treatment of coherence for general systems and illustrate how even qualitative accuracy requires higher order terms in the Moyal expansion to be included. The model provides an experimentally relevant example of a molecular Schrödinger's cat state. The alive and dead cats of the exact two-state quantum evolution collapse into a "zombie" cat in the semiclassical limit-an averaged behavior, neither alive nor dead, leading to significant errors. The inclusion of the Moyal correction restores a faithful simultaneously alive and dead representation of the cat that is experimentally observable.
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Affiliation(s)
- Austin T Green
- University of California, Irvine, California 92697-2025, USA
| | - Craig C Martens
- University of California, Irvine, California 92697-2025, USA
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8
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Miyazaki K, Ananth N. Nonadiabatic simulations of photoisomerization and dissociation in ethylene using ab initio classical trajectories. J Chem Phys 2023; 159:124110. [PMID: 38127384 DOI: 10.1063/5.0163371] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 09/05/2023] [Indexed: 12/23/2023] Open
Abstract
We simulate the nonadiabatic dynamics of photo-induced isomerization and dissociation in ethylene using ab initio classical trajectories in an extended phase space of nuclear and electronic variables. This is achieved by employing the linearized semiclassical initial value representation method for nonadiabatic dynamics, where discrete electronic states are mapped to continuous classical variables using either the Meyer-Miller-Stock-Thoss representation or a more recently introduced spin mapping approach. Trajectory initial conditions are sampled by constraining electronic state variables to a single initial excited state and by drawing nuclear phase space configurations from a Wigner distribution at a finite temperature. An ensemble of classical ab initio trajectories is then generated to compute thermal population correlation functions and analyze the mechanisms of isomerization and dissociation. Our results serve as a demonstration that this parameter-free semiclassical approach is computationally efficient and accurate, identifying mechanistic pathways in agreement with previous theoretical studies and also uncovering dissociation pathways observed experimentally.
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Affiliation(s)
- K Miyazaki
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA
| | - N Ananth
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA
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9
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Limbu DK, Shakib FA. Real-Time Dynamics and Detailed Balance in Ring Polymer Surface Hopping: The Impact of Frustrated Hops. J Phys Chem Lett 2023; 14:8658-8666. [PMID: 37732811 DOI: 10.1021/acs.jpclett.3c02085] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/22/2023]
Abstract
Ring polymer surface hopping (RPSH) has been recently introduced as a well-tailored method for incorporating nuclear quantum effects, such as zero-point energy and tunneling, into nonadiabatic molecular dynamics simulations. The practical widespread usage of RPSH demands a comprehensive benchmarking of different reaction regimes and conditions with equal emphasis on demonstrating both the cons and the pros of the method. Here, we investigate the fundamental questions related to the conservation of energy and detailed balance in the context of RPSH. Using Tully's avoided crossing model as well as a 2-state quantum system coupled to a classical bath undergoing Langevin dynamics, we probe the critical problem of the proper treatment of the classically forbidden transitions stemming from the surface hopping algorithm. We show that proper treatment of these frustrated hops is key to the accurate description of real-time dynamics as well as reproducing the correct quantum Boltzmann populations.
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Affiliation(s)
- Dil K Limbu
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
| | - Farnaz A Shakib
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
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10
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Cook L, Runeson JE, Richardson JO, Hele TJH. Which Algorithm Best Propagates the Meyer-Miller-Stock-Thoss Mapping Hamiltonian for Non-Adiabatic Dynamics? J Chem Theory Comput 2023; 19:6109-6125. [PMID: 37704193 PMCID: PMC10536990 DOI: 10.1021/acs.jctc.3c00709] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Indexed: 09/15/2023]
Abstract
A common strategy to simulate mixed quantum-classical dynamics is by propagating classical trajectories with mapping variables, often using the Meyer-Miller-Stock-Thoss (MMST) Hamiltonian or the related spin-mapping approach. When mapping the quantum subsystem, the coupled dynamics reduce to a set of equations of motion to integrate. Several numerical algorithms have been proposed, but a thorough performance comparison appears to be lacking. Here, we compare three time-propagation algorithms for the MMST Hamiltonian: the Momentum Integral (MInt) (J. Chem. Phys., 2018, 148, 102326), the Split-Liouvillian (SL) (Chem. Phys., 2017, 482, 124-134), and the algorithm in J. Chem. Phys., 2012, 136, 084101 that we refer to as the Degenerate Eigenvalue (DE) algorithm due to the approximation required during derivation. We analyze the accuracy of individual trajectories, correlation functions, energy conservation, symplecticity, Liouville's theorem, and the computational cost. We find that the MInt algorithm is the only rigorously symplectic algorithm. However, comparable accuracy at a lower computational cost can be obtained with the SL algorithm. The approximation implicitly made within the DE algorithm conserves energy poorly, even for small timesteps, and thus leads to slightly different results. These results should guide future mapping-variable simulations.
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Affiliation(s)
- Lauren
E. Cook
- Department
of Chemistry, University College London, Christopher Ingold Building, London WC1H 0AJ, U.K.
| | - Johan E. Runeson
- Department
of Chemistry and Applied Biosciences, ETH
Zürich, Zürich 8093, Switzerland
| | - Jeremy O. Richardson
- Department
of Chemistry and Applied Biosciences, ETH
Zürich, Zürich 8093, Switzerland
| | - Timothy J. H. Hele
- Department
of Chemistry, University College London, Christopher Ingold Building, London WC1H 0AJ, U.K.
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11
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Abstract
We present a nonadiabatic classical-trajectory approach that offers the best of both worlds between fewest-switches surface hopping (FSSH) and quasiclassical mapping dynamics. This mapping approach to surface hopping (MASH) propagates the nuclei on the active adiabatic potential-energy surface, such as in FSSH. However, unlike in FSSH, transitions between active surfaces are deterministic and occur when the electronic mapping variables evolve between specified regions of the electronic phase space. This guarantees internal consistency between the active surface and the electronic degrees of freedom throughout the dynamics. MASH is rigorously derivable from exact quantum mechanics as a limit of the quantum-classical Liouville equation (QCLE), leading to a unique prescription for momentum rescaling and frustrated hops. Hence, a quantum-jump procedure can, in principle, be used to systematically converge the accuracy of the results to that of the QCLE. This jump procedure also provides a rigorous framework for deriving approximate decoherence corrections similar to those proposed for FSSH. We apply MASH to simulate the nonadiabatic dynamics in various model systems and show that it consistently produces more accurate results than FSSH at a comparable computational cost.
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12
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Malpathak S, Ananth N. Non-linear correlation functions and zero-point energy flow in mixed quantum-classical semiclassical dynamics. J Chem Phys 2023; 158:104106. [PMID: 36922136 DOI: 10.1063/5.0133222] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2023] Open
Abstract
Mixed quantum classical (MQC)-initial value representation (IVR) is a recently introduced semiclassical framework that allows for selective quantization of the modes of a complex system. In the quantum limit, MQC reproduces the semiclassical Double Herman-Kluk IVR results, accurately capturing nuclear quantum coherences and conserving zero-point energy. However, in the classical limit, although MQC mimics the Husimi-IVR for real-time correlation functions with linear operators, it is significantly less accurate for non-linear correlation functions with errors even at time zero. Here, we identify the origin of this discrepancy in the MQC formulation and propose a modification. We analytically show that the modified MQC approach is exact for all correlation functions at time zero, and in a study of zero-point energy (ZPE) flow, we numerically demonstrate that it correctly obtains the quantum and classical limits as a function of time. Interestingly, although classical-limit MQC simulations show the expected, unphysical ZPE leakage, we find that it is possible to predict and even modify the direction of ZPE flow through selective quantization of the system, with the quantum-limit modes accepting energy but preserving the minimum quantum mechanically required energy.
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Affiliation(s)
- Shreyas Malpathak
- Department of Chemistry and Chemical Biology, Baker Laboratory, Cornell University, Ithaca, New York 14853, USA
| | - Nandini Ananth
- Department of Chemistry and Chemical Biology, Baker Laboratory, Cornell University, Ithaca, New York 14853, USA
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13
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Garashchuk S, Stetzler J, Rassolov V. Factorized Electron-Nuclear Dynamics with an Effective Complex Potential. J Chem Theory Comput 2023; 19:1393-1408. [PMID: 36795898 DOI: 10.1021/acs.jctc.2c01019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
Abstract
We present a quantum dynamics approach for molecular systems based on wave function factorization into components describing the light and heavy particles, such as electrons and nuclei. The dynamics of the nuclear subsystem can be viewed as motion of the trajectories defined in the nuclear subspace, evolving according to the average nuclear momentum of the full wave function. The probability density flow between the nuclear and electronic subsystems is facilitated by the imaginary potential, derived to ensure a physically meaningful normalization of the electronic wave function for each configuration of the nuclei, and conservation of the probability density associated with each trajectory in the Lagrangian frame of reference. The imaginary potential, defined in the nuclear subspace, depends on the momentum variance in the nuclear coordinates averaged over the electronic component of the wave function. An effective real potential, driving the dynamics of the nuclear subsystem, is defined to minimize motion of the electronic wave function in the nuclear degrees of freedom. Illustration and the analysis of the formalism are given for a two-dimensional model system of vibrationally nonadiabatic dynamics.
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Affiliation(s)
- Sophya Garashchuk
- Department of Chemistry & Biochemistry, University of South Carolina, Columbia, South Carolina 29208, United States
| | - Julian Stetzler
- Department of Chemistry & Biochemistry, University of South Carolina, Columbia, South Carolina 29208, United States
| | - Vitaly Rassolov
- Department of Chemistry & Biochemistry, University of South Carolina, Columbia, South Carolina 29208, United States
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14
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Montoya-Castillo A, Markland TE. A derivation of the conditions under which bosonic operators exactly capture fermionic structure and dynamics. J Chem Phys 2023; 158:094112. [PMID: 36889969 DOI: 10.1063/5.0138664] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/15/2023] Open
Abstract
The dynamics of many-body fermionic systems are important in problems ranging from catalytic reactions at electrochemical surfaces to transport through nanojunctions and offer a prime target for quantum computing applications. Here, we derive the set of conditions under which fermionic operators can be exactly replaced by bosonic operators that render the problem amenable to a large toolbox of dynamical methods while still capturing the correct dynamics of n-body operators. Importantly, our analysis offers a simple guide on how one can exploit these simple maps to calculate nonequilibrium and equilibrium single- and multi-time correlation functions essential in describing transport and spectroscopy. We use this to rigorously analyze and delineate the applicability of simple yet effective Cartesian maps that have been shown to correctly capture the correct fermionic dynamics in select models of nanoscopic transport. We illustrate our analytical results with exact simulations of the resonant level model. Our work provides new insights as to when one can leverage the simplicity of bosonic maps to simulate the dynamics of many-electron systems, especially those where an atomistic representation of nuclear interactions becomes essential.
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Affiliation(s)
| | - Thomas E Markland
- Department of Chemistry, Stanford University, Stanford, California 94305, USA
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15
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Amati G, Runeson JE, Richardson JO. On detailed balance in nonadiabatic dynamics: From spin spheres to equilibrium ellipsoids. J Chem Phys 2023; 158:064113. [PMID: 36792511 DOI: 10.1063/5.0137828] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
Trajectory-based methods that propagate classical nuclei on multiple quantum electronic states are often used to simulate nonadiabatic processes in the condensed phase. A long-standing problem of these methods is their lack of detailed balance, meaning that they do not conserve the equilibrium distribution. In this article, we investigate ideas for restoring detailed balance in mixed quantum-classical systems by tailoring the previously proposed spin-mapping approach to thermal equilibrium. We find that adapting the spin magnitude can recover the correct long-time populations but is insufficient to conserve the full equilibrium distribution. The latter can however be achieved by a more flexible mapping of the spin onto an ellipsoid, which is constructed to fulfill detailed balance for arbitrary potentials. This ellipsoid approach solves the problem of negative populations that has plagued previous mapping approaches and can therefore be applied also to strongly asymmetric and anharmonic systems. Because it conserves the thermal distribution, the method can also exploit efficient sampling schemes used in standard molecular dynamics, which drastically reduces the number of trajectories needed for convergence. The dynamics does however still have mean-field character, as is observed most clearly by evaluating reaction rates in the golden-rule limit. This implies that although the ellipsoid mapping provides a rigorous framework, further work is required to find an accurate classical-trajectory approximation that captures more properties of the true quantum dynamics.
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Affiliation(s)
- Graziano Amati
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
| | - Johan E Runeson
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
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16
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Bossion D, Chowdhury SN, Huo P. Non-adiabatic ring polymer molecular dynamics in the phase space of the SU(N) Lie group. J Chem Phys 2023; 158:044123. [PMID: 36725494 DOI: 10.1063/5.0133970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
We derive the non-adiabatic ring polymer molecular dynamics (RPMD) approach in the phase space of the SU(N) Lie Group. This method, which we refer to as the spin mapping non-adiabatic RPMD (SM-NRPMD), is based on the spin-mapping formalism for the electronic degrees of freedom (DOFs) and ring polymer path-integral description for the nuclear DOFs. Using the Stratonovich-Weyl transform for the electronic DOFs and the Wigner transform for the nuclear DOFs, we derived an exact expression of the Kubo-transformed time-correlation function (TCF). We further derive the spin mapping non-adiabatic Matsubara dynamics using the Matsubara approximation that removes the high frequency nuclear normal modes in the TCF and derive the SM-NRPMD approach from the non-adiabatic Matsubara dynamics by discarding the imaginary part of the Liouvillian. The SM-NRPMD method has numerical advantages compared to the original NRPMD method based on the Meyer-Miller-Stock-Thoss (MMST) mapping formalism due to a more natural mapping using the SU(N) Lie Group that preserves the symmetry of the original system. We numerically compute the Kubo-transformed position auto-correlation function and electronic population correlation function for three-state model systems. The numerical results demonstrate the accuracy of the SM-NRPMD method, which outperforms the original MMST-based NRPMD. We envision that the SM-NRPMD method will be a powerful approach to simulate electronic non-adiabatic dynamics and nuclear quantum effects accurately.
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Affiliation(s)
- Duncan Bossion
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
| | - Sutirtha N Chowdhury
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
| | - Pengfei Huo
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
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17
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Gelin MF, Chen L, Domcke W. Equation-of-Motion Methods for the Calculation of Femtosecond Time-Resolved 4-Wave-Mixing and N-Wave-Mixing Signals. Chem Rev 2022; 122:17339-17396. [PMID: 36278801 DOI: 10.1021/acs.chemrev.2c00329] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Femtosecond nonlinear spectroscopy is the main tool for the time-resolved detection of photophysical and photochemical processes. Since most systems of chemical interest are rather complex, theoretical support is indispensable for the extraction of the intrinsic system dynamics from the detected spectroscopic responses. There exist two alternative theoretical formalisms for the calculation of spectroscopic signals, the nonlinear response-function (NRF) approach and the spectroscopic equation-of-motion (EOM) approach. In the NRF formalism, the system-field interaction is assumed to be sufficiently weak and is treated in lowest-order perturbation theory for each laser pulse interacting with the sample. The conceptual alternative to the NRF method is the extraction of the spectroscopic signals from the solutions of quantum mechanical, semiclassical, or quasiclassical EOMs which govern the time evolution of the material system interacting with the radiation field of the laser pulses. The NRF formalism and its applications to a broad range of material systems and spectroscopic signals have been comprehensively reviewed in the literature. This article provides a detailed review of the suite of EOM methods, including applications to 4-wave-mixing and N-wave-mixing signals detected with weak or strong fields. Under certain circumstances, the spectroscopic EOM methods may be more efficient than the NRF method for the computation of various nonlinear spectroscopic signals.
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Affiliation(s)
- Maxim F Gelin
- School of Science, Hangzhou Dianzi University, Hangzhou 310018, China
| | - Lipeng Chen
- Max-Planck-Institut für Physik komplexer Systeme, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
| | - Wolfgang Domcke
- Department of Chemistry, Technical University of Munich, D-85747 Garching,Germany
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18
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Dupuy L, Talotta F, Agostini F, Lauvergnat D, Poirier B, Scribano Y. Adiabatic and Nonadiabatic Dynamics with Interacting Quantum Trajectories. J Chem Theory Comput 2022; 18:6447-6462. [DOI: 10.1021/acs.jctc.2c00744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Lucien Dupuy
- Laboratoire Univers et Particules de Montpellier, UMR-CNRS 5299, Université de Montpellier, Place Eugène Bataillon, 34095Montpellier, France
| | - Francesco Talotta
- Université Paris-Saclay, CNRS, Institut de Chimie Physique, UMR-CNRS 8000, 91405Orsay, France
| | - Federica Agostini
- Université Paris-Saclay, CNRS, Institut de Chimie Physique, UMR-CNRS 8000, 91405Orsay, France
| | - David Lauvergnat
- Université Paris-Saclay, CNRS, Institut de Chimie Physique, UMR-CNRS 8000, 91405Orsay, France
| | - Bill Poirier
- Department of Chemistry and Biochemistry, and Department of Physics, Texas Tech University, Box 41061, 79409-1061Lubbock, Texas, United States
| | - Yohann Scribano
- Laboratoire Univers et Particules de Montpellier, UMR-CNRS 5299, Université de Montpellier, Place Eugène Bataillon, 34095Montpellier, France
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19
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Trenins G, Richardson JO. Nonadiabatic instanton rate theory beyond the golden-rule limit. J Chem Phys 2022; 156:174115. [DOI: 10.1063/5.0088518] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Fermi's golden rule describes the leading-order behaviour of the reaction rate as a function of the diabatic coupling. Its asymptotic (ℏ →0) limit is the semiclassical golden-rule instanton rate theory, which rigorously approximates nuclear quantum effects, lends itself to efficient numerical computation and gives physical insight into reaction mechanisms. However the golden rule by itself becomes insufficient as the strength of the diabatic coupling increases, so higher-order terms must be additionally considered. In this work we give a first-principles derivation of the next-order term beyond the golden rule, represented as a sum of three components. Two of them lead to new instanton pathways that extend the golden-rule case and, among other factors, account for the effects of recrossing on the full rate. The remaining component derives from the equilibrium partition function and accounts for changes in potential energy around the reactant and product wells due to diabatic coupling. The new semiclassical theory demands little computational effort beyond a golden-rule instanton calculation. It makes it possible to rigorously assess the accuracy of the golden-rule approximation and sets the stage for future work on general semiclassical nonadiabatic rate theories.
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Affiliation(s)
- George Trenins
- ETH Zurich Department of Chemistry and Applied Biosciences, Switzerland
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20
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Ananth N. Path Integrals for Nonadiabatic Dynamics: Multistate Ring Polymer Molecular Dynamics. Annu Rev Phys Chem 2022; 73:299-322. [PMID: 35081325 DOI: 10.1146/annurev-physchem-082620-021809] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
This review focuses on a recent class of path-integral-based methods that simulate nonadiabatic dynamics in the condensed phase using only classical molecular dynamics trajectories in an extended phase space. Specifically, a semiclassical mapping protocol is used to derive an exact, continuous, Cartesian variable path-integral representation for the canonical partition function of a system in which multiple electronic states are coupled to nuclear degrees of freedom. Building on this exact statistical foundation, multistate ring polymer molecular dynamics methods are developed for the approximate calculation of real-time thermal correlation functions. The remarkable promise of these multistate ring polymer methods, their successful applications, and their limitations are discussed in detail.Expected final online publication date for the Annual Review of Physical Chemistry, Volume 73 is April 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
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Affiliation(s)
- Nandini Ananth
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York, USA;
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21
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Abstract
Multidimensional optical spectra are measured from the response of a material system to a sequence of laser pulses and have the capacity to elucidate specific molecular interactions and dynamics whose influences are absent or obscured in a conventional linear absorption spectrum. Interpretation of complex spectra is supported by theoretical modeling of the spectroscopic observable, requiring implementation of quantum dynamics for coupled electrons and nuclei. Performing numerically correct quantum dynamics in this context may pose computational challenges, particularly in the condensed phase. Semiclassical methods based on calculating classical trajectories offer a practical alternative. Here I review the recent application of some semiclassical, trajectory-based methods to nonlinear molecular vibrational and electronic spectra. Expected final online publication date for the Annual Review of Physical Chemistry, Volume 73 is April 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
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Affiliation(s)
- Roger F. Loring
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York, USA
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22
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Mannouch JR, Richardson JO. A partially linearized spin-mapping approach for simulating nonlinear optical spectra. J Chem Phys 2022; 156:024108. [PMID: 35032975 DOI: 10.1063/5.0077744] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We present a partially linearized method based on spin-mapping for computing both linear and nonlinear optical spectra. As observables are obtained from ensembles of classical trajectories, the approach can be applied to the large condensed-phase systems that undergo photosynthetic light-harvesting processes. In particular, the recently derived spin partially linearized density matrix method has been shown to exhibit superior accuracy in computing population dynamics compared to other related classical-trajectory methods. Such a method should also be ideally suited to describing the quantum coherences generated by interaction with light. We demonstrate that this is, indeed, the case by calculating the nonlinear optical response functions relevant for the pump-probe and 2D photon-echo spectra for a Frenkel biexciton model and the Fenna-Matthews-Olsen light-harvesting complex. One especially desirable feature of our approach is that the full spectrum can be decomposed into its constituent components associated with the various Liouville-space pathways, offering a greater insight beyond what can be directly obtained from experiments.
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23
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Albareda G, Lively K, Sato SA, Kelly A, Rubio A. Conditional Wave Function Theory: A Unified Treatment of Molecular Structure and Nonadiabatic Dynamics. J Chem Theory Comput 2021; 17:7321-7340. [PMID: 34752108 PMCID: PMC8675140 DOI: 10.1021/acs.jctc.1c00772] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Indexed: 11/28/2022]
Abstract
We demonstrate that a conditional wave function theory enables a unified and efficient treatment of the equilibrium structure and nonadiabatic dynamics of correlated electron-ion systems. The conditional decomposition of the many-body wave function formally recasts the full interacting wave function of a closed system as a set of lower-dimensional (conditional) coupled "slices". We formulate a variational wave function ansatz based on a set of conditional wave function slices and demonstrate its accuracy by determining the structural and time-dependent response properties of the hydrogen molecule. We then extend this approach to include time-dependent conditional wave functions and address paradigmatic nonequilibrium processes including strong-field molecular ionization, laser-driven proton transfer, and nuclear quantum effects induced by a conical intersection. This work paves the road for the application of conditional wave function theory in equilibrium and out-of-equilibrium ab initio molecular simulations of finite and extended systems.
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Affiliation(s)
- Guillermo Albareda
- Nano-Bio
Spectroscopy Group and European Theoretical Spectroscopy Facility
(ETSF), Universidad del País Vasco
(UPV/EHU), Av. Tolosa
72, 20018 San Sebastian, Spain
- Institute
of Theoretical and Computational Chemistry, University of Barcelona, Martí i Franquès 1-11, 08028 Barcelona, Spain
- Max
Planck Institute for the Structure and Dynamics of Matter and Center
for Free-Electron Laser Science, Luruper Chaussee 149, 22761 Hamburg, Germany
| | - Kevin Lively
- Max
Planck Institute for the Structure and Dynamics of Matter and Center
for Free-Electron Laser Science, Luruper Chaussee 149, 22761 Hamburg, Germany
- The
Hamburg Centre for Ultrafast Imaging, University
of Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany
| | - Shunsuke A. Sato
- Max
Planck Institute for the Structure and Dynamics of Matter and Center
for Free-Electron Laser Science, Luruper Chaussee 149, 22761 Hamburg, Germany
- Center
for Computational Sciences, University of
Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8577, Japan
| | - Aaron Kelly
- Max
Planck Institute for the Structure and Dynamics of Matter and Center
for Free-Electron Laser Science, Luruper Chaussee 149, 22761 Hamburg, Germany
- The
Hamburg Centre for Ultrafast Imaging, University
of Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany
- Department
of Chemistry, Dalhousie University, Halifax, Nova Scotia B3H 4R2, Canada
| | - Angel Rubio
- Nano-Bio
Spectroscopy Group and European Theoretical Spectroscopy Facility
(ETSF), Universidad del País Vasco
(UPV/EHU), Av. Tolosa
72, 20018 San Sebastian, Spain
- Max
Planck Institute for the Structure and Dynamics of Matter and Center
for Free-Electron Laser Science, Luruper Chaussee 149, 22761 Hamburg, Germany
- The
Hamburg Centre for Ultrafast Imaging, University
of Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany
- Center
for Computational Quantum Physics (CCQ), Flatiron Institute, 162 Fifth Avenue, New York, New York 10010, United
States
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24
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Abstract
Rapid, far-from-equilibrium processes involving excitation of electronic, vibrational, spin, photon, topological, and other degrees of freedom form the basis of modern technologies, including electronics and optoelectronics, solar energy harvesting and conversion to electrical and chemical energy, quantum information processing, spin- and valleytronics, chemical detection, and medical therapies. Such processes are studied experimentally with various time-resolved spectroscopies that allow scientists to track system's evolution on ultrafast time scales and at close to atomistic level of detail. The availability of various forms of lasing has made such measurements easily accessible to many experimental groups worldwide, to study atoms and small molecules, nanoscale and condensed matter systems, proteins, cells, and mesoscopic materials. The experimental work necessitates parallel theoretical efforts needed to interpret the experiments and to provide insights that cannot be gained through measurements due to experimental limitations.Non-adiabatic (NA) molecular dynamics (MD) allows one to study processes at the atomistic level and in the time domain most directly mimicking the time-resolved experiments. Atomistic modeling takes full advantage of chemical intuition and principles that guide design and fabrication of molecules and materials. It provides atomistic origins of quasi-particles, such as holes, excitons, trions, plasmons, phonons, polarons, polaritons, spin-waves, momentum-resolved and topological states, electrically and magnetically polarized structures, and other abstract concepts. An atomistic description enables one to study realistic aspects of materials, which necessarily contain defects, dopants, surfaces, interfaces, passivating ligands, and solvent layers. Often, such realistic features govern material properties and are hard to account for phenomenologically. NA-MD requires few approximations and assumptions. It does not need to assume that atomic motions are harmonic, that electrons are Drude oscillators, that coupling between different degrees of freedom is weak, that dynamics is Markovian or has short memory, or that evolution occurs by exponential kinetics of transitions between few states. The classical or semiclassical treatment of atomic motions constitutes the main approximation of NA-MD and is used because atoms are 3-5 orders of magnitude heavier than electrons. NA-MD is limited by system size, typically hundreds or thousands of atoms, and time scale, picoseconds to nanoseconds. The quality of NA-MD simulations depends on the electronic structure method used to obtain excited state energies and NA couplings.NA-MD has been largely popularized and advanced in the chemistry community that focuses on molecules. Modeling far-from-equilibrium dynamics in nanoscale and condensed matter systems often has to account for other types of physics. At the same time, condensed phase NA-MD allows for approximations that may not work in molecules. Focusing on the recent NA-MD developments aimed at studying excited state processes in nanoscale and condensed phases, this Account considers how the phenomena important on the nanoscale can be incorporated into NA-MD and what approximations can be made to increase its efficiency with complex systems and processes.
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Affiliation(s)
- Oleg V. Prezhdo
- Departments of Chemistry, Physics and Astronomy, and Chemical Engineering University of Southern California, Los Angeles, California 90089, United States
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25
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Weight BM, Mandal A, Huo P. Ab initio symmetric quasi-classical approach to investigate molecular Tully models. J Chem Phys 2021; 155:084106. [PMID: 34470343 DOI: 10.1063/5.0061934] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We perform on-the-fly non-adiabatic molecular dynamics simulations using the symmetrical quasi-classical (SQC) approach with the recently suggested molecular Tully models: ethylene and fulvene. We attempt to provide benchmarks of the SQC methods using both the square and triangle windowing schemes as well as the recently proposed electronic zero-point-energy correction scheme (the so-called γ correction). We use the quasi-diabatic propagation scheme to directly interface the diabatic SQC methods with adiabatic electronic structure calculations. Our results showcase the drastic improvement of the accuracy by using the trajectory-adjusted γ-corrections, which outperform the widely used trajectory surface hopping method with decoherence corrections. These calculations provide useful and non-trivial tests to systematically investigate the numerical performance of various diabatic quantum dynamics approaches, going beyond simple diabatic model systems that have been used as the major workhorse in the quantum dynamics field. At the same time, these available benchmark studies will also likely foster the development of new quantum dynamics approaches based on these techniques.
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Affiliation(s)
- Braden M Weight
- Department of Physics and Astronomy, University of Rochester, Rochester, New York 14627, USA
| | - Arkajit Mandal
- Department of Chemistry, University of Rochester, Rochester, New York 14627, USA
| | - Pengfei Huo
- Department of Chemistry, University of Rochester, Rochester, New York 14627, USA
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26
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Hammes-Schiffer S. Nuclear-electronic orbital methods: Foundations and prospects. J Chem Phys 2021; 155:030901. [PMID: 34293877 DOI: 10.1063/5.0053576] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Abstract
The incorporation of nuclear quantum effects and non-Born-Oppenheimer behavior into quantum chemistry calculations and molecular dynamics simulations is a longstanding challenge. The nuclear-electronic orbital (NEO) approach treats specified nuclei, typically protons, quantum mechanically on the same level as the electrons with wave function and density functional theory methods. This approach inherently includes nuclear delocalization and zero-point energy in molecular energy calculations, geometry optimizations, reaction paths, and dynamics. It can also provide accurate descriptions of excited electronic, vibrational, and vibronic states as well as nuclear tunneling and nonadiabatic dynamics. Nonequilibrium nuclear-electronic dynamics simulations beyond the Born-Oppenheimer approximation can be used to investigate a wide range of excited state processes. This Perspective provides an overview of the foundational NEO methods and enumerates the prospects for using these methods as building blocks for future developments. The conceptual simplicity and computational efficiency of the NEO approach will enhance its accessibility and applicability to diverse chemical and biological systems.
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27
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Hu D, Xie Y, Peng J, Lan Z. On-the-Fly Symmetrical Quasi-Classical Dynamics with Meyer-Miller Mapping Hamiltonian for the Treatment of Nonadiabatic Dynamics at Conical Intersections. J Chem Theory Comput 2021; 17:3267-3279. [PMID: 34028268 DOI: 10.1021/acs.jctc.0c01249] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The on-the-fly version of the symmetrical quasi-classical dynamics method based on the Meyer-Miller mapping Hamiltonian (SQC/MM) is implemented to study the nonadiabatic dynamics at conical intersections of polyatomic systems. The current on-the-fly implementation of the SQC/MM method is based on the adiabatic representation and the dressed momentum. To include the zero-point energy (ZPE) correction of the electronic mapping variables, we employ both the γ-adjusted and γ-fixed approaches. Nonadiabatic dynamics of the methaniminium cation (CH2NH2+) and azomethane are simulated using the on-the-fly SQC/MM method. For CH2NH2+, both ZPE correction approaches give reasonable and consistent results. However, for azomethane, the γ-adjusted version of the SQC/MM dynamics behaves much better than the γ-fixed version. Further analysis indicates that it is always recommended to use the γ-adjusted SQC/MM dynamics in the on-the-fly simulation of photoinduced dynamics of polyatomic systems, particularly when the excited state is well separated from the ground state in the Franck-Condon region. This work indicates that the on-the-fly SQC/MM method is a powerful simulation protocol to deal with the nonadiabatic dynamics of realistic polyatomic systems.
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Affiliation(s)
- Deping Hu
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China.,School of Environment, South China Normal University, Guangzhou 510006, China
| | - Yu Xie
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China.,School of Environment, South China Normal University, Guangzhou 510006, China
| | - Jiawei Peng
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China.,School of Environment, South China Normal University, Guangzhou 510006, China
| | - Zhenggang Lan
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China.,School of Environment, South China Normal University, Guangzhou 510006, China
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28
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Chowdhury SN, Huo P. Non-adiabatic Matsubara dynamics and non-adiabatic ring-polymer molecular dynamics. J Chem Phys 2021; 154:124124. [PMID: 33810665 DOI: 10.1063/5.0042136] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
Abstract
We present the non-adiabatic Matsubara dynamics, a general framework for computing the time-correlation function (TCF) of electronically non-adiabatic systems. This new formalism is derived based on the generalized Kubo-transformed TCF using the Wigner representation for both the nuclear degrees of freedom and the electronic mapping variables. By dropping the non-Matsubara nuclear normal modes in the quantum Liouvillian and explicitly integrating these modes out from the expression of the TCF, we derived the non-adiabatic Matsubara dynamics approach. Further making the approximation to drop the imaginary part of the Matsubara Liouvillian and enforce the nuclear momentum integral to be real, we arrived at the non-adiabatic ring-polymer molecular dynamics (NRPMD) approach. We have further justified the capability of NRPMD for simulating the non-equilibrium TCF. This work provides the rigorous theoretical foundation for several recently proposed state-dependent RPMD approaches and offers a general framework for developing new non-adiabatic quantum dynamics methods in the future.
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Affiliation(s)
- Sutirtha N Chowdhury
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
| | - Pengfei Huo
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
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29
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Brown SE, Shakib FA. Recent progress in approximate quantum dynamics methods for the study of proton-coupled electron transfer reactions. Phys Chem Chem Phys 2021; 23:2535-2556. [PMID: 33367437 DOI: 10.1039/d0cp05166g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Proton-coupled electron transfer (PCET) reactions are ubiquitous natural processes at the heart of energy conversion reactions in photosynthesis and respiration, DNA repair, and diverse enzymatic reactions. Theoretical formulation and computational method developments have eyed modeling of thermal and photoinduced PCET for the last three decades. The accumulation of these studies, collected in dozens of reviews, accounts, and perspectives, has firmly established the influence of quantum effects, including non-adiabatic electronic transitions, vibrational relaxation, zero-point energy, and proton tunneling, on the rate and mechanism of PCET reactions. Here, we focus on some recently-developed methods, spanning the last eight years, that can quantitatively capture these effects in the PCET context and provide efficient means for their qualitative description in complex systems. The theoretical background of each method and their accuracy with respect to exact results are discussed and the results of relevant PCET simulations based on each method are presented.
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Affiliation(s)
- Sandra E Brown
- Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095, USA
| | - Farnaz A Shakib
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, NJ 07102, USA.
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30
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Chowdhury SN, Mandal A, Huo P. Ring polymer quantization of the photon field in polariton chemistry. J Chem Phys 2021; 154:044109. [PMID: 33514102 DOI: 10.1063/5.0038330] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
Abstract
We use the ring polymer (RP) representation to quantize the radiation field inside an optical cavity to investigate polariton quantum dynamics. Using a charge transfer model coupled to an optical cavity, we demonstrate that the RP quantization of the photon field provides accurate rate constants of the polariton mediated electron transfer reaction compared to Fermi's golden rule. Because RP quantization uses extended phase space to describe the photon field, it significantly reduces the computational costs compared to the commonly used Fock state description of the radiation field. Compared to the other quasi-classical descriptions of the photon field, such as the classical Wigner based mean-field Ehrenfest model, the RP representation provides a much more accurate description of the polaritonic quantum dynamics because it alleviates the potential quantum distribution leakage problem associated with the photonic degrees of freedom (DOF). This work demonstrates the possibility of using the ring polymer description to treat the quantized radiation field in polariton chemistry, offering an accurate and efficient approach for future investigations in cavity quantum electrodynamics.
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Affiliation(s)
- Sutirtha N Chowdhury
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
| | - Arkajit Mandal
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
| | - Pengfei Huo
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, New York 14627, USA
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31
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Gao X, Geva E. Improving the Accuracy of Quasiclassical Mapping Hamiltonian Methods by Treating the Window Function Width as an Adjustable Parameter. J Phys Chem A 2020; 124:11006-11016. [DOI: 10.1021/acs.jpca.0c09750] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xing Gao
- School of Materials, Sun Yat-sen University, Shenzhen, Guangdong 518100, China
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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32
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Mannouch JR, Richardson JO. A partially linearized spin-mapping approach for nonadiabatic dynamics. I. Derivation of the theory. J Chem Phys 2020; 153:194109. [DOI: 10.1063/5.0031168] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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33
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Mannouch JR, Richardson JO. A partially linearized spin-mapping approach for nonadiabatic dynamics. II. Analysis and comparison with related approaches. J Chem Phys 2020; 153:194110. [DOI: 10.1063/5.0031173] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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34
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Lawrence JE, Manolopoulos DE. An improved path-integral method for golden-rule rates. J Chem Phys 2020; 153:154113. [PMID: 33092388 DOI: 10.1063/5.0022535] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We present a simple method for the calculation of reaction rates in the Fermi golden-rule limit, which accurately captures the effects of tunneling and zero-point energy. The method is based on a modification of the recently proposed golden-rule quantum transition state theory (GR-QTST) of Thapa, Fang, and Richardson [J. Chem. Phys. 150, 104107 (2019)]. While GR-QTST is not size consistent, leading to the possibility of unbounded errors in the rate, our modified method has no such issue and so can be reliably applied to condensed phase systems. Both methods involve path-integral sampling in a constrained ensemble; the two methods differ, however, in the choice of constraint functional. We demonstrate numerically that our modified method is as accurate as GR-QTST for the one-dimensional model considered by Thapa and co-workers. We then study a multidimensional spin-boson model, for which our method accurately predicts the true quantum rate, while GR-QTST breaks down with an increasing number of boson modes in the discretization of the spectral density. Our method is able to accurately predict reaction rates in the Marcus inverted regime without the need for the analytic continuation required by Wolynes theory.
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Affiliation(s)
- Joseph E Lawrence
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QZ, United Kingdom
| | - David E Manolopoulos
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QZ, United Kingdom
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35
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Lawrence JE, Manolopoulos DE. Confirming the role of nuclear tunneling in aqueous ferrous–ferric electron transfer. J Chem Phys 2020; 153:154114. [DOI: 10.1063/5.0022678] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023] Open
Affiliation(s)
- Joseph E. Lawrence
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QZ, United Kingdom
| | - David E. Manolopoulos
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QZ, United Kingdom
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36
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Remsing RC, Bates JE. Effective mass path integral simulations of quasiparticles in condensed phases. J Chem Phys 2020; 153:121104. [PMID: 33003737 DOI: 10.1063/5.0020555] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The quantum many-body problem in condensed phases is often simplified using a quasiparticle description, such as effective mass theory for electron motion in a periodic solid. These approaches are often the basis for understanding many fundamental condensed phase processes, including the molecular mechanisms underlying solar energy harvesting and photocatalysis. Despite the importance of these effective particles, there is still a need for computational methods that can explore their behavior on chemically relevant length and time scales. This is especially true when the interactions between the particles and their environment are important. We introduce an approach for studying quasiparticles in condensed phases by combining effective mass theory with the path integral treatment of quantum particles. This framework incorporates the generally anisotropic electronic band structure of materials into path integral simulation schemes to enable modeling of quasiparticles in quantum confinement, for example. We demonstrate the utility of effective mass path integral simulations by modeling an exciton in solid potassium chloride and electron trapping by a sulfur vacancy in monolayer molybdenum disulfide.
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Affiliation(s)
- Richard C Remsing
- Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, New Jersey 08854, USA
| | - Jefferson E Bates
- A. R. Smith Department of Chemistry and Fermentation Sciences, Appalachian State University, Boone, North Carolina 28608, USA
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37
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Sibaev M, Polyak I, Manby FR, Knowles PJ. Molecular second-quantized Hamiltonian: Electron correlation and non-adiabatic coupling treated on an equal footing. J Chem Phys 2020; 153:124102. [DOI: 10.1063/5.0018930] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Affiliation(s)
- Marat Sibaev
- School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff CF10 3AT, United Kingdom
| | - Iakov Polyak
- School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff CF10 3AT, United Kingdom
| | - Frederick R. Manby
- School of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom
| | - Peter J. Knowles
- School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff CF10 3AT, United Kingdom
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38
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Lawrence JE, Manolopoulos DE. A general non-adiabatic quantum instanton approximation. J Chem Phys 2020; 152:204117. [DOI: 10.1063/5.0009109] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Joseph E. Lawrence
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford OX1 3QZ, United Kingdom
| | - David E. Manolopoulos
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford OX1 3QZ, United Kingdom
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39
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Pavošević F, Culpitt T, Hammes-Schiffer S. Multicomponent Quantum Chemistry: Integrating Electronic and Nuclear Quantum Effects via the Nuclear–Electronic Orbital Method. Chem Rev 2020; 120:4222-4253. [DOI: 10.1021/acs.chemrev.9b00798] [Citation(s) in RCA: 53] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Fabijan Pavošević
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Tanner Culpitt
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Sharon Hammes-Schiffer
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
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40
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Tao X, Shushkov P, Miller TF. Microcanonical rates from ring-polymer molecular dynamics: Direct-shooting, stationary-phase, and maximum-entropy approaches. J Chem Phys 2020; 152:124117. [DOI: 10.1063/1.5144307] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Affiliation(s)
- Xuecheng Tao
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - Philip Shushkov
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - Thomas F. Miller
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
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41
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Gao X, Saller MAC, Liu Y, Kelly A, Richardson JO, Geva E. Benchmarking Quasiclassical Mapping Hamiltonian Methods for Simulating Electronically Nonadiabatic Molecular Dynamics. J Chem Theory Comput 2020; 16:2883-2895. [DOI: 10.1021/acs.jctc.9b01267] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xing Gao
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | | | - Yudan Liu
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Aaron Kelly
- Department of Chemistry, Dalhousie University, 15000 Halifax, Nova Scotia, Canada
| | | | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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42
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Ranya S, Ananth N. Multistate ring polymer instantons and nonadiabatic reaction rates. J Chem Phys 2020; 152:114112. [DOI: 10.1063/1.5132807] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Srinath Ranya
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA
| | - Nandini Ananth
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA
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43
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Runeson JE, Richardson JO. Generalized spin mapping for quantum-classical dynamics. J Chem Phys 2020; 152:084110. [DOI: 10.1063/1.5143412] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Affiliation(s)
- Johan E. Runeson
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
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44
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Saller MAC, Kelly A, Richardson JO. Improved population operators for multi-state nonadiabatic dynamics with the mixed quantum-classical mapping approach. Faraday Discuss 2020; 221:150-167. [DOI: 10.1039/c9fd00050j] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Application to the 7-state Frenkel-exciton Hamiltonian for the Fenna–Matthews–Olson complex shows that using a different representation of the electronic population operators can drastically improve the accuracy of the quasiclassical mapping approach without increasing the computational effort.
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Affiliation(s)
| | - Aaron Kelly
- Department of Chemistry
- Dalhousie University
- Halifax
- Canada
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45
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Ghosh S, Giannini S, Lively K, Blumberger J. Nonadiabatic dynamics with quantum nuclei: simulating charge transfer with ring polymer surface hopping. Faraday Discuss 2020; 221:501-525. [DOI: 10.1039/c9fd00046a] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Exploring effects of quantizing nuclei in non-adiabatic dynamics for simulating charge transfer in a dimer of “ethylene-like-molecules” at different temperatures.
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Affiliation(s)
- Soumya Ghosh
- Department of Physics and Astronomy
- University College London
- London WC1E 6BT
- UK
| | - Samuele Giannini
- Department of Physics and Astronomy
- University College London
- London WC1E 6BT
- UK
| | - Kevin Lively
- Department of Physics and Astronomy
- University College London
- London WC1E 6BT
- UK
| | - Jochen Blumberger
- Department of Physics and Astronomy
- University College London
- London WC1E 6BT
- UK
- Institute for Advanced Study
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46
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Zheng J, Xie Y, Jiang S, Long Y, Ning X, Lan Z. Initial sampling in symmetrical quasiclassical dynamics based on Li-Miller mapping Hamiltonian. Phys Chem Chem Phys 2019; 21:26502-26514. [PMID: 31777888 DOI: 10.1039/c9cp03975a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
A symmetrical quasiclassical (SQC) dynamics approach based on the Li-Miller (LM) mapping Hamiltonian (SQC-LM) was employed to describe nonadiabatic dynamics. In principle, the different initial sampling procedures may be applied in the SQC-LM dynamics, and the results may be dependent on different initial sampling. We provided various initial sampling approaches and checked their influence. We selected two groups of models including site-exciton models for exciton dynamics and linear vibronic coupling models for conical intersections to test the performance of SQC-LM dynamics with the different initial sampling methods. The results were examined with respect to those of the accurate multiconfigurational time-dependent Hartree (MCTDH) quantum dynamics. For both the models, the SQC-LM method more-or-less gives a reasonable description of the population dynamics, while the influence of the initial sampling approaches on the final results is noticeable. It seems that the suitable initial sampling methods should be determined by the system under study. This indicates that the combination of the SQC-LM method with a suitable sampling approach may be a potential method in the description of nonadiabatic dynamics.
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Affiliation(s)
- Jie Zheng
- Industrial Research Institute of Nonwovens & Technical Textiles, College of Textiles Clothing, Qingdao University, Qingdao 266071, China.
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47
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Zhou W, Mandal A, Huo P. Quasi-Diabatic Scheme for Nonadiabatic On-the-Fly Simulations. J Phys Chem Lett 2019; 10:7062-7070. [PMID: 31665889 DOI: 10.1021/acs.jpclett.9b02747] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
We use the quasi-diabatic (QD) propagation scheme to perform on-the-fly nonadiabatic simulations of the photodynamics of ethylene. The QD scheme enables a seamless interface between accurate diabatic-based quantum dynamics approaches and adiabatic electronic structure calculations, explicitly avoiding any efforts to construct global diabatic states or reformulate the diabatic dynamics approach to the adiabatic representation. Using the partial linearized path-integral approach and the symmetrical quasi-classical approach as the diabatic dynamics methods, the QD propagation scheme enables direct nonadiabatic simulation with complete active space self-consistent field on-the-fly electronic structure calculations. The population dynamics obtained from both approaches are in a close agreement with the quantum wavepacket-based method and outperform the widely used trajectory surface-hopping approach. Further analysis of the ethylene photodeactivation pathways demonstrates the correct predictions of competing processes of nonradiative relaxation mechanism through various conical intersections. This work provides the foundation of using accurate diabatic dynamics approaches and on-the-fly adiabatic electronic structure information to perform ab initio nonadiabatic simulation.
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Affiliation(s)
- Wanghuai Zhou
- Advanced Functional Material and Photoelectric Technology Research Institution, School of Science , Hubei University of Automotive Technology , Shiyan , Hubei 442002 , People's Republic of China
- Department of Chemistry , University of Rochester , 120 Trustee Road , Rochester , New York 14627 , United States
| | - Arkajit Mandal
- Department of Chemistry , University of Rochester , 120 Trustee Road , Rochester , New York 14627 , United States
| | - Pengfei Huo
- Department of Chemistry , University of Rochester , 120 Trustee Road , Rochester , New York 14627 , United States
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48
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Lawrence JE, Fletcher T, Lindoy LP, Manolopoulos DE. On the calculation of quantum mechanical electron transfer rates. J Chem Phys 2019; 151:114119. [DOI: 10.1063/1.5116800] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Joseph E. Lawrence
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford, OX1 3QZ, United Kingdom
| | - Theo Fletcher
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford, OX1 3QZ, United Kingdom
| | - Lachlan P. Lindoy
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford, OX1 3QZ, United Kingdom
| | - David E. Manolopoulos
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford, OX1 3QZ, United Kingdom
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49
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Runeson JE, Richardson JO. Spin-mapping approach for nonadiabatic molecular dynamics. J Chem Phys 2019; 151:044119. [DOI: 10.1063/1.5100506] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Johan E. Runeson
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
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50
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He X, Liu J. A new perspective for nonadiabatic dynamics with phase space mapping models. J Chem Phys 2019; 151:024105. [DOI: 10.1063/1.5108736] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Xin He
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Jian Liu
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
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