1
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Shi H, Ward-Deitrich C, Ponte F, Sicilia E, Goenaga-Infante H, Sadler PJ. Photosubstitution and photoreduction of a diazido platinum(IV) anticancer complex. Dalton Trans 2024; 53:13044-13054. [PMID: 39028324 DOI: 10.1039/d4dt01587h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/20/2024]
Abstract
The hyphenation of HPLC with its high separation ability and ICP-MS with its excellent sensitivity, allows the analysis of Pt drugs in biological samples at the low nanomolar concentration levels. On the other hand, LC-MS provides molecular structural confirmation for each species. Using a combination of these methods, we have investigated the speciation of the photoactive anticancer complex diazido Pt(IV) complex trans, trans, trans-[Pt(N3)2(OH)2(py)2] (FM-190) in aqueous solution and biofluids at single-digit nanomolar concentrations before and after irradiation. FM-190 displays high stability in human blood plasma in the dark at 37 °C. Interestingly, the polyhydroxido species [{PtIV(py)2(OH)4} + Na]+ and [{PtIV(py)2(N3)(OH)3} + Na]+ resulting from the replacement of azido ligands, as determined by LC-MS, were the major products after photoirradiation of FM-190 with blue light (463 nm). This finding suggests that such photosubstituted Pt(IV) tri- and tetra-hydroxido species could play important roles in the biological activity of this anticancer complex. Density Functional Theory (DFT) and Time-Dependent DFT (TDDFT) calculations show that these Pt(IV) species arising from FM-190 in aqueous media can be formed directly from a singlet excited state. The results highlight how speciation analysis (metallomics) can shed light on photoactivation pathways for FM-190 and formation of potential excited-state pharmacophores. The ability to detect and identify photoproducts at physiologically-relevant concentrations in cells and tissues will be important for preclinical development studies of this class of photoactivatable platinum drugs.
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Affiliation(s)
- Huayun Shi
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, UK.
| | - Christian Ward-Deitrich
- LGC Limited, National Measurement Laboratory (NML), Queens Road, Teddington, Middlesex TW11 0LY, UK.
| | - Fortuna Ponte
- Department of Chemistry and Chemical Technologies, University of Calabria, via Pietro Bucci, 87036 Arcavacata di Rende, Cs, Italy.
| | - Emilia Sicilia
- Department of Chemistry and Chemical Technologies, University of Calabria, via Pietro Bucci, 87036 Arcavacata di Rende, Cs, Italy.
| | - Heidi Goenaga-Infante
- LGC Limited, National Measurement Laboratory (NML), Queens Road, Teddington, Middlesex TW11 0LY, UK.
| | - Peter J Sadler
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, UK.
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2
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Malme JT, Weaver JN, Girolami GS, Vura-Weis J. Picosecond Metal-to-Ligand Charge-Transfer Deactivation in Co(ppy) 3 via Jahn-Teller Distortion. Inorg Chem 2024; 63:13825-13830. [PMID: 39023554 DOI: 10.1021/acs.inorgchem.4c01959] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/20/2024]
Abstract
The excited-state dynamics of fac-Co(ppy)3, where ppy = 2-[2-(pyridyl)phenyl], are measured with femtosecond UV-vis transient absorption spectroscopy. The initial state is confirmed with spectroelectrochemistry to have significant metal-to-ligand charge transfer (MLCT) character, unlike other Co complexes that generally have ligand-to-metal charge transfer or ligand-field transitions in this energy range. Ground-state recovery occurs in 8.65 ps in dichloromethane. Density functional theory calculations show that the MLCT state undergoes Jahn-Teller distortion and converts to a five-coordinate triplet metal-centered state in which one Co-N bond is broken. The results highlight a potential pitfall of heteroleptic bidentate ligands when designing strong-field ligands for transition-metal chromophores.
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Affiliation(s)
- Justin T Malme
- Department of Chemistry, University of Illinois at Urbana-Champaign, Champaign, Illinois 61801, United States
| | - Jenelle N Weaver
- Department of Chemistry, University of Illinois at Urbana-Champaign, Champaign, Illinois 61801, United States
| | - Gregory S Girolami
- Department of Chemistry, University of Illinois at Urbana-Champaign, Champaign, Illinois 61801, United States
| | - Josh Vura-Weis
- Department of Chemistry, University of Illinois at Urbana-Champaign, Champaign, Illinois 61801, United States
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3
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Kushwaha R, Upadhyay A, Peters S, Yadav AK, Mishra A, Bera A, Sadhukhan T, Banerjee S. Visible and Red Light-Triggered Anticancer Profile of a Ferrocene-Re(I)-Tricarbonyl Conjugate: Experimental and Theoretical Studies. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:12226-12238. [PMID: 38814099 DOI: 10.1021/acs.langmuir.4c01296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2024]
Abstract
We have red-shifted the light absorbance property of a Re(I)-tricarbonyl complex via distant conjugation of a ferrocene moiety and developed a novel complex ReFctp, [Re(Fctp)(CO)3Cl], where Fctp = 4'-ferrocenyl-2,2':6',2″-terpyridine. ReFctp showed green to red light absorption ability and blue emission, indicating its potential for photodynamic therapy (PDT) application. The conjugation of ferrocene introduced ferrocene-based transitions, which lie at a higher wavelength within the PDT therapeutic window. The time-dependent density functional theory and excited state calculations revealed an efficient intersystem crossing for ReFctp, which is helpful for PDT. ReFctp elicited both PDT type I and type II pathways for reactive oxygen species (ROS) generation and facilitated NADH (1,4-dihydro-nicotinamide adenine dinucleotide) oxidation upon exposure to visible light. Importantly, ReFctp showed effective penetration through the layers of clinically relevant 3D multicellular tumor spheroids and localized primarily in mitochondria (Pearson's correlation coefficient, PCC = 0.65) of A549 cancer cells. ReFctp produced more than 20 times higher phototoxicity (IC50 ∼1.5 μM) by inducing ROS generation and altering mitochondrial membrane potential in A549 cancer cells than the nonferrocene analogue Retp, [Re(CO)3(tp)Cl], where tp = 2,2':6',2″-terpyridine. ReFctp induced apoptotic mode of cell death with a notable photocytotoxicity index (PI, PI = IC50dark/IC50light) and selectivity index (SI, SI = normal cell's IC50dark/cancer cell's IC50light) in the range of 25-33.
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Affiliation(s)
- Rajesh Kushwaha
- Department of Chemistry, Indian Institute of Technology (BHU), Varanasi, Uttar Pradesh 221005, India
| | - Aarti Upadhyay
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bengaluru, Karnataka 560012, India
| | - Silda Peters
- Department of Chemistry, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603203, India
| | - Ashish Kumar Yadav
- Department of Chemistry, Indian Institute of Technology (BHU), Varanasi, Uttar Pradesh 221005, India
| | - Arya Mishra
- Department of Chemistry, Indian Institute of Technology (BHU), Varanasi, Uttar Pradesh 221005, India
| | - Arpan Bera
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bengaluru, Karnataka 560012, India
| | - Tumpa Sadhukhan
- Department of Chemistry, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603203, India
| | - Samya Banerjee
- Department of Chemistry, Indian Institute of Technology (BHU), Varanasi, Uttar Pradesh 221005, India
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4
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Shi H, Ponte F, Grewal JS, Clarkson GJ, Imberti C, Hands-Portman I, Dallmann R, Sicilia E, Sadler PJ. Tuning the photoactivated anticancer activity of Pt(iv) compounds via distant ferrocene conjugation. Chem Sci 2024; 15:4121-4134. [PMID: 38487220 PMCID: PMC10935708 DOI: 10.1039/d3sc03092j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2023] [Accepted: 01/30/2024] [Indexed: 03/17/2024] Open
Abstract
Photoactive prodrugs offer potential for spatially-selective antitumour activity with minimal effects on normal tissues. Excited-state chemistry can induce novel effects on biochemical pathways and combat resistance to conventional drugs. Photoactive metal complexes in particular, have a rich and relatively unexplored photochemistry, especially an ability to undergo facile intersystem crossing and populate triplet states. We have conjugated the photoactive octahedral Pt(iv) complex trans, trans, trans-[Pt(N3)2(OH)2(py)2] to ferrocene to introduce novel features into a candidate photochemotherapeutic drug. The X-ray crystal structure of the conjugate Pt-Fe confirmed the axial coordination of a ferrocene carboxylate, with Pt(iv) and Fe(ii) 6.07 Å apart. The conjugation of ferrocene red-shifted the absorption spectrum and ferrocene behaves as a light antenna allowing charge transfer from iron to platinum, promoting the photoactivation of Pt-Fe with light of longer wavelength. Cancer cellular accumulation is enhanced, and generation of reactive species is catalysed after photoirradiation, introducing ferroptosis as a contribution towards the cell-death mechanism. TDDFT calculations were performed to shed light on the behaviour of Pt-Fe when it is irradiated. Intersystem spin-crossing allows the formation of triplet states centred on both metal atoms. The dissociative nature of triplet states confirms that they can be involved in ligand detachment due to irradiation. The Pt(ii) photoproducts mainly retain the trans-{Pt(py)2}2+fragment. Visible light irradiation gives rise to micromolar activity for Pt-Fe towards ovarian, lung, prostate and bladder cancer cells under both normoxia and hypoxia, and some photoproducts appear to retain Pt(iv)-Fe(ii) conjugation.
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Affiliation(s)
- Huayun Shi
- Department of Chemistry, University of Warwick Coventry CV4 7AL UK
| | - Fortuna Ponte
- Department of Chemistry and Chemical Technologies, University of Calabria via Pietro Bucci, 87036 Arcavacata di Rende Cs Italy
| | - Jaspreet S Grewal
- Division of Biomedical Sciences, Warwick Medical School CV4 7AL Coventry UK
| | - Guy J Clarkson
- Department of Chemistry, University of Warwick Coventry CV4 7AL UK
| | - Cinzia Imberti
- Department of Chemistry, University of Warwick Coventry CV4 7AL UK
| | | | - Robert Dallmann
- Division of Biomedical Sciences, Warwick Medical School CV4 7AL Coventry UK
| | - Emilia Sicilia
- Department of Chemistry and Chemical Technologies, University of Calabria via Pietro Bucci, 87036 Arcavacata di Rende Cs Italy
| | - Peter J Sadler
- Department of Chemistry, University of Warwick Coventry CV4 7AL UK
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5
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Yang G, Shillito GE, Zens C, Dietzek-Ivanšić B, Kupfer S. The three kingdoms-Photoinduced electron transfer cascades controlled by electronic couplings. J Chem Phys 2023; 159:024109. [PMID: 37428052 DOI: 10.1063/5.0156279] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 06/15/2023] [Indexed: 07/11/2023] Open
Abstract
Excited states are the key species in photocatalysis, while the critical parameters that govern their applications are (i) excitation energy, (ii) accessibility, and (iii) lifetime. However, in molecular transition metal-based photosensitizers, there is a design tension between the creation of long-lived excited (triplet), e.g., metal-to-ligand charge transfer (3MLCT) states and the population of such states. Long-lived triplet states have low spin-orbit coupling (SOC) and hence their population is low. Thus, a long-lived triplet state can be populated but inefficiently. If the SOC is increased, the triplet state population efficiency is improved-coming at the cost of decreasing the lifetime. A promising strategy to isolate the triplet excited state away from the metal after intersystem crossing (ISC) involves the combination of transition metal complex and an organic donor/acceptor group. Here, we elucidate the excited state branching processes in a series of Ru(II)-terpyridyl push-pull triads by quantum chemical simulations. Scalar-relativistic time-dependent density theory simulations reveal that efficient ISC takes place along 1/3MLCT gateway states. Subsequently, competitive electron transfer (ET) pathways involving the organic chromophore, i.e., 10-methylphenothiazinyl and the terpyridyl ligands are available. The kinetics of the underlying ET processes were investigated within the semiclassical Marcus picture and along efficient internal reaction coordinates that connect the respective photoredox intermediates. The key parameter that governs the population transfer away from the metal toward the organic chromophore either by means of ligand-to-ligand (3LLCT; weakly coupled) or intra-ligand charge transfer (3ILCT; strongly coupled) states was determined to be the magnitude of the involved electronic coupling.
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Affiliation(s)
- Guangjun Yang
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
| | - Georgina E Shillito
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
| | - Clara Zens
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
| | - Benjamin Dietzek-Ivanšić
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
- Leibniz Institute of Photonic Technology (IPHT) e.V. Department Functional Interfaces, Albert-Einstein-Straße 9, 07745 Jena, Germany
| | - Stephan Kupfer
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
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6
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North SC, Wilson AK. Ab Initio Composite Approaches for Heavy Element Energetics: Ionization Potentials for the Actinide Series of Elements. J Phys Chem A 2022; 126:3027-3042. [PMID: 35427146 DOI: 10.1021/acs.jpca.2c01007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The first, second, and third gas-phase ionization potentials have been determined for the actinide series of elements using an ab initio composite scalar and fully relativistic approach, employing the coupled cluster with single, double, and perturbative triple excitations (CCSD(T)) and Dirac Hartree-Fock (DHF) methods, extrapolated to the complete basis set (CBS) limit. The impact of electron correlation and basis set choice within this framework are examined. Additionally, the first three ionization potentials were obtained using an ab initio heavy element correlation-consistent Composite Approach (here referred to as α-ccCA). This is the first utilization of a ccCA for actinide species.
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Affiliation(s)
- Sasha C North
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States
| | - Angela K Wilson
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States
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7
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Yuan M, Gutierrez O. Mechanisms, Challenges, and Opportunities of Dual Ni/Photoredox-Catalyzed C(sp 2)-C(sp 3) Cross-Couplings. WILEY INTERDISCIPLINARY REVIEWS. COMPUTATIONAL MOLECULAR SCIENCE 2022; 12:e1573. [PMID: 35664524 PMCID: PMC9162266 DOI: 10.1002/wcms.1573] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2021] [Accepted: 08/09/2021] [Indexed: 12/28/2022]
Abstract
The merging of photoredox and nickel catalysis has revolutionized the field of C-C cross-coupling. However, in comparison to the development of synthetic methods, detailed mechanistic investigations of these catalytic systems are lagging. To improve the mechanistic understanding, computational tools have emerged as powerful tools to elucidate the factors controlling reactivity and selectivity in these complex catalytic transformations. Based on the reported computational studies, it appears that the mechanistic picture of catalytic systems is not generally applicable, but is rather dependent on the specific choice of substrate, ligands, photocatalysts, etc. Given the complexity of these systems, the need for more accurate computational methods, readily available and user-friendly dynamics simulation tools, and data-driven approaches is clear in order to understand at the molecular level the mechanisms of these transformations. In particular, we anticipate that such improvement of theoretical methods will become crucial to advance the understanding of excited-state properties and dynamics of key species, as well as to enable faster and unbiased exploration of reaction pathways. Further, with greater collaboration between computational, experimental, and spectroscopic communities, the mechanistic investigation of photoredox/Ni dual-catalytic reactions is expected to thrive quickly, facilitating the design of novel catalytic systems and promoting our understanding of the reaction selectivity.
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8
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Kupfer S, Wächtler M, Guthmuller J. Light‐Driven Multi‐Charge Separation in a Push‐Pull Ruthenium‐based Photosensitizer – Assessed by RASSCF and TDDFT Simulations. CHEMPHOTOCHEM 2022. [DOI: 10.1002/cptc.202200010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Stephan Kupfer
- Friedrich Schiller Universitat Jena Chemisch Geowissenschaftliche Fakultat Institute of Physical Chemistry Helmholtzweg 1 07743 Jena GERMANY
| | - Maria Wächtler
- Leibniz Institute of Photonic Technology: Leibniz-Institut fur Photonische Technologien Functional Interfaces GERMANY
| | - Julien Guthmuller
- Gdansk University of Technology: Politechnika Gdanska Institute of Physics and Computer Science POLAND
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9
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Beaujean P, Champagne B. Unraveling the Symmetry Effects on the Second-Order Nonlinear Optical Responses of Molecular Switches: The Case of Ruthenium Complexes. Inorg Chem 2022; 61:1928-1940. [PMID: 35023732 DOI: 10.1021/acs.inorgchem.1c03077] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Owing to their odd order, second-order nonlinear optical (NLO) responses are very sensitive to symmetry. Therefore, within hyper-Rayleigh scattering (HRS) technique, the symmetry impacts the amplitude of the molecular responses, the HRS first hyperpolarizability (βHRS), and the depolarization ratio (DR). Starting from a challenging octupolar structure bearing six ruthenium(II) ammine centers π-conjugated via quaterpyridyl moieties to a tris-chelated zinc(II) core, together with its Λ shape and one-dimensional analogues built by replacing one or two Ru-quaterpyridyl moieties with bipyridine moieties, (time-dependent) density functional theory calculations have been enacted to unravel the symmetry-NLO response relationships as well as their RuII/III redox-triggered switching effects. The one-dimensional and Λ-shaped NLOphores present βHRS values ∼3 times larger than those of the octupolar system, for both Ru oxidation states. However, using the few-state valence bond-charge transfer models demonstrates that the βHRS response of the octupolar complex cation can become larger than those of its one-dimensional and Λ-shaped analogues provided stronger donor-acceptor groups are employed. In parallel, the DRs decrease from a strong dipolar character (DR ≈ 6) for the one-dimensional chromophore to a weaker dipolar character (DR ≈ 5) for the Λ-shaped one and to a clear octupolar character (DR ≈ 1.7) for the last one. In all cases, the β responses originate mostly from metal-to-ligand charge transfer excited states, as revealed using a new scheme for analyzing the variations in electron density upon excitation. The RuII/III oxidations lead to a strong decrease in the βHRS responses, which is attributed to the loss of the donor character of the Ru centers and therefore to the reduction of the push-pull π-conjugation. These results demonstrate that the NLO contrast and the NLO switching behavior of these Ru cations are maintained for the different molecular symmetries. Finally, the character of the β responses of the oxidized species, as revealed by the DR values, further evidences a clear evolution from dipolar to octupolar NLOphores.
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Affiliation(s)
- Pierre Beaujean
- Laboratory of Theoretical Chemistry, Unit of Theoretical and Structural Physical Chemistry, NISM (Namur Institute of Structured Matter), University of Namur, Rue de Bruxelles 61, B-5000 Namur, Belgium
| | - Benoît Champagne
- Laboratory of Theoretical Chemistry, Unit of Theoretical and Structural Physical Chemistry, NISM (Namur Institute of Structured Matter), University of Namur, Rue de Bruxelles 61, B-5000 Namur, Belgium
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10
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Dabbish E, Mazzone G, Russo N, Sicilia E. Mechanism of action of the curcumin cis-diammineplatinum(ii) complex as a photocytotoxic agent. Inorg Chem Front 2020. [DOI: 10.1039/d0qi00503g] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
This work provides a deep understanding of the photoprocesses involved in the activation of the curcumin cis-diammineplatinum(ii) complex.
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Affiliation(s)
- Eslam Dabbish
- Department of Chemistry and Chemical Technologies
- Università della Calabria
- Arcavacata di Rende
- Italy
| | - Gloria Mazzone
- Department of Chemistry and Chemical Technologies
- Università della Calabria
- Arcavacata di Rende
- Italy
| | - Nino Russo
- Department of Chemistry and Chemical Technologies
- Università della Calabria
- Arcavacata di Rende
- Italy
| | - Emilia Sicilia
- Department of Chemistry and Chemical Technologies
- Università della Calabria
- Arcavacata di Rende
- Italy
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11
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Bokarev SI, Kühn O. Theoretical X‐ray spectroscopy of transition metal compounds. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2019. [DOI: 10.1002/wcms.1433] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
| | - Oliver Kühn
- Institut für Physik Universität Rostock Rostock Germany
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12
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Computational study of the [(CO)2(benzoate)MII/III(terephthalate)]0/1+ complexes with M = V, Cr, Mn, Fe and Co. COMPUT THEOR CHEM 2019. [DOI: 10.1016/j.comptc.2019.03.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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13
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14
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Vogiatzis KD, Polynski MV, Kirkland JK, Townsend J, Hashemi A, Liu C, Pidko EA. Computational Approach to Molecular Catalysis by 3d Transition Metals: Challenges and Opportunities. Chem Rev 2019; 119:2453-2523. [PMID: 30376310 PMCID: PMC6396130 DOI: 10.1021/acs.chemrev.8b00361] [Citation(s) in RCA: 222] [Impact Index Per Article: 44.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2018] [Indexed: 12/28/2022]
Abstract
Computational chemistry provides a versatile toolbox for studying mechanistic details of catalytic reactions and holds promise to deliver practical strategies to enable the rational in silico catalyst design. The versatile reactivity and nontrivial electronic structure effects, common for systems based on 3d transition metals, introduce additional complexity that may represent a particular challenge to the standard computational strategies. In this review, we discuss the challenges and capabilities of modern electronic structure methods for studying the reaction mechanisms promoted by 3d transition metal molecular catalysts. Particular focus will be placed on the ways of addressing the multiconfigurational problem in electronic structure calculations and the role of expert bias in the practical utilization of the available methods. The development of density functionals designed to address transition metals is also discussed. Special emphasis is placed on the methods that account for solvation effects and the multicomponent nature of practical catalytic systems. This is followed by an overview of recent computational studies addressing the mechanistic complexity of catalytic processes by molecular catalysts based on 3d metals. Cases that involve noninnocent ligands, multicomponent reaction systems, metal-ligand and metal-metal cooperativity, as well as modeling complex catalytic systems such as metal-organic frameworks are presented. Conventionally, computational studies on catalytic mechanisms are heavily dependent on the chemical intuition and expert input of the researcher. Recent developments in advanced automated methods for reaction path analysis hold promise for eliminating such human-bias from computational catalysis studies. A brief overview of these approaches is presented in the final section of the review. The paper is closed with general concluding remarks.
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Affiliation(s)
| | | | - Justin K. Kirkland
- Department
of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Jacob Townsend
- Department
of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Ali Hashemi
- Inorganic
Systems Engineering group, Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
| | - Chong Liu
- Inorganic
Systems Engineering group, Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
| | - Evgeny A. Pidko
- TheoMAT
group, ITMO University, Lomonosova 9, St. Petersburg 191002, Russia
- Inorganic
Systems Engineering group, Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
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15
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Sousa C, Alías M, Domingo A, de Graaf C. Deactivation of Excited States in Transition-Metal Complexes: Insight from Computational Chemistry. Chemistry 2018; 25:1152-1164. [DOI: 10.1002/chem.201801990] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2018] [Indexed: 11/11/2022]
Affiliation(s)
- Carmen Sousa
- Departament de Química Física and Institut de Química, Teòrica i Computacional; Universitat de Barcelona; C/ Martí i Franquès 1 08028 Barcelona Catalunya Spain
| | - Marc Alías
- Departament de Química Física i Inorgànica; Universitat Rovira i Virgili; Marcel⋅lí Domingo 1 43007 Tarragona Catalunya Spain
| | - Alex Domingo
- Departament de Química Física i Inorgànica; Universitat Rovira i Virgili; Marcel⋅lí Domingo 1 43007 Tarragona Catalunya Spain
| | - Coen de Graaf
- Departament de Química Física i Inorgànica; Universitat Rovira i Virgili; Marcel⋅lí Domingo 1 43007 Tarragona Catalunya Spain
- ICREA; Pg. Lluis Companys 23 08010 Barcelona Catalunya Spain
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16
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Heil A, Kleinschmidt M, Marian CM. On the performance of DFT/MRCI Hamiltonians for electronic excitations in transition metal complexes: The role of the damping function. J Chem Phys 2018; 149:164106. [DOI: 10.1063/1.5050476] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Adrian Heil
- Institute of Theoretical and Computaional Chemistry, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany
| | - Martin Kleinschmidt
- Institute of Theoretical and Computaional Chemistry, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany
| | - Christel M. Marian
- Institute of Theoretical and Computaional Chemistry, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany
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17
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Marian CM, Heil A, Kleinschmidt M. The DFT/MRCI method. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2018. [DOI: 10.1002/wcms.1394] [Citation(s) in RCA: 56] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Christel M. Marian
- Institute of Theoretical and Computational Chemistry Heinrich Heine Universität Düsseldorf Düsseldorf
| | - Adrian Heil
- Institute of Theoretical and Computational Chemistry Heinrich Heine Universität Düsseldorf Düsseldorf
| | - Martin Kleinschmidt
- Institute of Theoretical and Computational Chemistry Heinrich Heine Universität Düsseldorf Düsseldorf
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18
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Luo Y, Hu W, Shen W. Unveiling the Dual Emission Photo-Deactivation Mechanism of a Neutral Heteroleptic Iridium (III) Complex. Chemphyschem 2018; 19:2200-2207. [DOI: 10.1002/cphc.201800368] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2018] [Indexed: 01/19/2023]
Affiliation(s)
- Yafei Luo
- School of Chemistry and Chemical Engineering; Southwest University; Chongqing China 400715
- International Academy of Targeted Therapeutics and Innovation; Chongqing University of Arts and Sciences; Chongqing China 402160
| | - Wuhong Hu
- School of Chemistry and Chemical Engineering; Southwest University; Chongqing China 400715
- School of Chemistry and Chemical Engineering; Yangtze Normal University; Chongqing China 400800
| | - Wei Shen
- School of Chemistry and Chemical Engineering; Southwest University; Chongqing China 400715
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19
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Alipour M, Damiri S. Development of a Novel Index for Analysis of Electronically Excited States. Chemphyschem 2017; 18:480-487. [PMID: 27957791 DOI: 10.1002/cphc.201600907] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2016] [Revised: 10/19/2016] [Indexed: 11/11/2022]
Abstract
Concerning the major factors in the context of excited states analyses, namely charge centroids of the orbitals involved in the excitations, the distance between orbital centroids, and overlap integrals, a new metric-the Ω index-is proposed to assign the character and optical properties of electronically excited states. Using several molecules from different classes and also a well-studied standard database for time-dependent density functional theory (TD-DFT) studies as benchmark criteria, accountability of the developed index is numerically assessed for local, charge transfer, and Rydberg excitations. It is shown that the nature of excited states can be discriminated using the Ω index, where its superior performance for those situations in which the previous descriptors were not helpful is also unveiled. Relationships are also examined between the Ω index and optical properties of some molecules under study in the framework of the sum-over-state approach. It is observed that there are correlations between the proposed index and computed hyperpolarizabilities based on the sum-over-state scheme. These findings offer the possibility of estimating excited-state properties of large systems from simple descriptors without explicitly performing calculations of high-order response functions.
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Affiliation(s)
- Mojtaba Alipour
- Department of Chemistry, College of Sciences, Shiraz University, Shiraz, Iran
| | - Samaneh Damiri
- Department of Chemistry, College of Sciences, Shiraz University, Shiraz, Iran
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20
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First Principle Modelling of Materials and Processes in Dye-Sensitized Photoanodes for Solar Energy and Solar Fuels. COMPUTATION 2017. [DOI: 10.3390/computation5010005] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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21
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Stojanović L, Alyoubi AO, Aziz SG, Hilal RH, Barbatti M. UV excitations of halons. J Chem Phys 2016; 145:184306. [DOI: 10.1063/1.4967170] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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22
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Pastore M, De Angelis F, Angeli C. Optical absorption spectrum of the N3 solar cell sensitizer by second-order multireference perturbation theory. Theor Chem Acc 2016. [DOI: 10.1007/s00214-016-1868-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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23
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On the performance of time-dependent double-hybrid density functionals for description of absorption and emission spectra of heteroaromatic compounds. Theor Chem Acc 2016. [DOI: 10.1007/s00214-016-1838-4] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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24
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Sidhu LS, Halder A, Rai S. Dopant induced modulation in the structure and electronic properties of Au10 cluster. RSC Adv 2016. [DOI: 10.1039/c6ra20808h] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
DFT calculations at PBE0/SDD ∪ 6-31++G(d,p) level suggest that doped Au10 clusters (with alkali and alkaline earth metals as dopants) are better potential candidates for use in heterogeneous catalysis.
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Affiliation(s)
- Lovepreet Singh Sidhu
- Center for Computational Natural Sciences and Bioinformatics
- International Institute of Information Technology Hyderabad
- Hyderabad
- India
| | - Antarip Halder
- Center for Computational Natural Sciences and Bioinformatics
- International Institute of Information Technology Hyderabad
- Hyderabad
- India
| | - Sandhya Rai
- Theoretical Science Unit
- Jawaharlal Nehru Centre for Advanced Scientific Research
- Bengaluru
- India
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25
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Rota Martir D, Hedley GJ, Cordes DB, Slawin AMZ, Escudero D, Jacquemin D, Kosikova T, Philp D, Dawson DM, Ashbrook SE, Samuel IDW, Zysman-Colman E. Exploring the self-assembly and energy transfer of dynamic supramolecular iridium-porphyrin systems. Dalton Trans 2016; 45:17195-17205. [DOI: 10.1039/c6dt02619b] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We present the first examples of dynamic supramolecular iridium–zinc porphyrin systems.
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26
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Bettinger HF, Tönshoff C, Doerr M, Sanchez-Garcia E. Electronically Excited States of Higher Acenes up to Nonacene: A Density Functional Theory/Multireference Configuration Interaction Study. J Chem Theory Comput 2015; 12:305-12. [DOI: 10.1021/acs.jctc.5b00671] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Holger F. Bettinger
- Institut
für Organische Chemie, Universität Tübingen, Auf
der Morgenstelle 18, 72076 Tübingen, Baden-Württemberg, Germany
| | - Christina Tönshoff
- Institut
für Organische Chemie, Universität Tübingen, Auf
der Morgenstelle 18, 72076 Tübingen, Baden-Württemberg, Germany
| | - Markus Doerr
- Max-Planck-Institut
für Kohlenforschung, Kaiser-Wilhelm-Platz
1, 45470 Mülheim/Ruhr, North Rhine-Westphalia, Germany
| | - Elsa Sanchez-Garcia
- Max-Planck-Institut
für Kohlenforschung, Kaiser-Wilhelm-Platz
1, 45470 Mülheim/Ruhr, North Rhine-Westphalia, Germany
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27
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Heil A, Gollnisch K, Kleinschmidt M, Marian CM. On the photophysics of four heteroleptic iridium(III) phenylpyridyl complexes investigated by relativistic multi-configuration methods. Mol Phys 2015. [DOI: 10.1080/00268976.2015.1076902] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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28
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Seidu I, Krykunov M, Ziegler T. Applications of Time-Dependent and Time-Independent Density Functional Theory to Electronic Transitions in Tetrahedral d0 Metal Oxides. J Chem Theory Comput 2015; 11:4041-53. [DOI: 10.1021/acs.jctc.5b00298] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Issaka Seidu
- Department of Chemistry, University of Calgary, University
Drive 2500, Calgary, AB T2N-1N4, Canada
| | - Mykhaylo Krykunov
- Department of Chemistry, University of Calgary, University
Drive 2500, Calgary, AB T2N-1N4, Canada
| | - Tom Ziegler
- Department of Chemistry, University of Calgary, University
Drive 2500, Calgary, AB T2N-1N4, Canada
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29
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Kleinschmidt M, van Wüllen C, Marian CM. Intersystem-crossing and phosphorescence rates in fac-IrIII(ppy)3: A theoretical study involving multi-reference configuration interaction wavefunctions. J Chem Phys 2015; 142:094301. [DOI: 10.1063/1.4913513] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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30
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Santos AR, Escudero D, González L, Orellana G. Unravelling the Quenching Mechanisms of a Luminescent RuIIProbe for CuII. Chem Asian J 2015; 10:622-9. [DOI: 10.1002/asia.201403340] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2014] [Indexed: 11/08/2022]
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31
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Escudero D, Thiel W, Champagne B. Spectroscopic and second-order nonlinear optical properties of Ruthenium(ii) complexes: a DFT/MRCI and ADC(2) study. Phys Chem Chem Phys 2015; 17:18908-12. [DOI: 10.1039/c5cp01884f] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
We present an assessment of correlated electronic structure methods for the nonlinear optical properties of Ru(ii) dyes.
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Affiliation(s)
- Daniel Escudero
- Chimie Et Interdisciplinarité
- Synthèse
- Analyse
- Modélisation (CEISAM)
- Université de Nantes
| | - Walter Thiel
- Max-Planck-Institut für Kohlenforschung
- D-45470 Mülheim an der Ruhr
- Germany
| | - Benoît Champagne
- Laboratoire de Chimie Théorique (LCT)
- Unité de Chimie Physique Théorique et Structurale (UCPTS)
- Département de Chimie
- Université de Namur
- 5000 Namur
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32
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Skelton JM, Crespo-Otero R, Hatcher LE, Parker SC, Raithby PR, Walsh A. Energetics, thermal isomerisation and photochemistry of the linkage-isomer system [Ni(Et4dien)(η2-O,ON)(η1-NO2)]. CrystEngComm 2015. [DOI: 10.1039/c4ce01411a] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Isomerisation of an NO2 ligand coordinated to Ni in a molecular crystal is explored using a range of quantum chemical techniques.
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Affiliation(s)
| | | | | | | | | | - Aron Walsh
- Department of Chemistry
- University of Bath
- Bath, UK
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33
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Escudero D, Jacquemin D. Computational insights into the photodeactivation dynamics of phosphors for OLEDs: a perspective. Dalton Trans 2015; 44:8346-55. [DOI: 10.1039/c4dt03804e] [Citation(s) in RCA: 82] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
In this perspective we highlight recent computational efforts to unravel competing photodeactivation mechanisms of radiative and non-radiative nature of phosphors.
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Affiliation(s)
- Daniel Escudero
- Chimie Et Interdisciplinarité
- Synthèse
- Analyse
- Modélisation (CEISAM)
- 44322 Nantes
| | - Denis Jacquemin
- Chimie Et Interdisciplinarité
- Synthèse
- Analyse
- Modélisation (CEISAM)
- 44322 Nantes
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34
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Gong H, Luo Q, Li QS, Xie Y, King RB, Schaefer HF. Cyclization of Thiocarbonyl Groups in Binuclear Homoleptic Nickel Thiocarbonyls To Give Ligands Derived from Sulfur Analogues of Croconic and Rhodizonic Acids. Inorg Chem 2014; 54:132-42. [DOI: 10.1021/ic501924p] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Hejing Gong
- MOE Key Laboratory of Theoretical Environmental
Chemistry, Center for Computational Quantum Chemistry, South China Normal University, Guangzhou 510631, People’s Republic of China
| | - Qiong Luo
- MOE Key Laboratory of Theoretical Environmental
Chemistry, Center for Computational Quantum Chemistry, South China Normal University, Guangzhou 510631, People’s Republic of China
| | - Qian-shu Li
- MOE Key Laboratory of Theoretical Environmental
Chemistry, Center for Computational Quantum Chemistry, South China Normal University, Guangzhou 510631, People’s Republic of China
| | - Yaoming Xie
- Department of Chemistry
and Center for Computational Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | - R. Bruce King
- MOE Key Laboratory of Theoretical Environmental
Chemistry, Center for Computational Quantum Chemistry, South China Normal University, Guangzhou 510631, People’s Republic of China
- Department of Chemistry
and Center for Computational Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | - Henry F. Schaefer
- Department of Chemistry
and Center for Computational Chemistry, University of Georgia, Athens, Georgia 30602, United States
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35
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Huang J, Du L, Hu D, Lan Z. Theoretical analysis of excited states and energy transfer mechanism in conjugated dendrimers. J Comput Chem 2014; 36:151-63. [DOI: 10.1002/jcc.23778] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2014] [Revised: 09/05/2014] [Accepted: 10/13/2014] [Indexed: 01/28/2023]
Affiliation(s)
- Jing Huang
- Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences; Qingdao 266101 Shandong People's Republic of China
- University of Chinese Academy of Sciences; Beijing 100049 People's Republic of China
- The Qingdao Key Lab of Solar Energy Utilization and Energy Storage Technology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences; Qingdao 266101 Shandong People's Republic of China
| | - Likai Du
- Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences; Qingdao 266101 Shandong People's Republic of China
- University of Chinese Academy of Sciences; Beijing 100049 People's Republic of China
- The Qingdao Key Lab of Solar Energy Utilization and Energy Storage Technology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences; Qingdao 266101 Shandong People's Republic of China
| | - Deping Hu
- Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences; Qingdao 266101 Shandong People's Republic of China
- University of Chinese Academy of Sciences; Beijing 100049 People's Republic of China
- The Qingdao Key Lab of Solar Energy Utilization and Energy Storage Technology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences; Qingdao 266101 Shandong People's Republic of China
| | - Zhenggang Lan
- Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences; Qingdao 266101 Shandong People's Republic of China
- University of Chinese Academy of Sciences; Beijing 100049 People's Republic of China
- The Qingdao Key Lab of Solar Energy Utilization and Energy Storage Technology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences; Qingdao 266101 Shandong People's Republic of China
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36
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Escudero D, Thiel W. Exploring the Triplet Excited State Potential Energy Surfaces of a Cyclometalated Pt(II) Complex: Is There Non-Kasha Emissive Behavior? Inorg Chem 2014; 53:11015-9. [DOI: 10.1021/ic501430x] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Daniel Escudero
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz
1, 45470 Mülheim
an der Ruhr, Germany
| | - Walter Thiel
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz
1, 45470 Mülheim
an der Ruhr, Germany
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37
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Jawiczuk M, Rode JE, Suszczyńska A, Szugajew A, Frelek J. The utility of dimolybdenum tetrakis(μ-isovalerate) and tetrakis(μ-pivalate) in the stereochemical studies of various transparent compounds. RSC Adv 2014. [DOI: 10.1039/c4ra07408d] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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