1
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Magnera TF, Dron PI, Bozzone JP, Jovanovic M, Rončević I, Tortorici E, Bu W, Miller EM, Rogers CT, Michl J. Porphene and porphite as porphyrin analogs of graphene and graphite. Nat Commun 2023; 14:6308. [PMID: 37813887 PMCID: PMC10562370 DOI: 10.1038/s41467-023-41461-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Accepted: 09/01/2023] [Indexed: 10/11/2023] Open
Abstract
Two-dimensional materials have unusual properties and promise applications in nanoelectronics, spintronics, photonics, (electro)catalysis, separations, and elsewhere. Most are inorganic and their properties are difficult to tune. Here we report the preparation of Zn porphene, a member of the previously only hypothetical organic metalloporphene family. Similar to graphene, these also are fully conjugated two-dimensional polymers, but are composed of fused metalloporphyrin rings. Zn porphene is synthesized on water surface by two-dimensional oxidative polymerization of a Langmuir layer of Zn porphyrin with K2IrCl6, reminiscent of known one-dimensional polymerization of pyrroles. It is transferable to other substrates and bridges μm-sized pits. Contrary to previous theoretical predictions of metallic conductivity, it is a p-type semiconductor due to a predicted Peierls distortion of its unit cell from square to rectangular, analogous to the appearance of bond-length alternation in antiaromatic molecules. The observed reversible insertion of various metal ions, possibly carrying a fifth or sixth ligand, promises tunability and even patterning of circuits on an atomic canvas without removing any π centers from conjugation.
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Grants
- University of Colorado Boulder Institute of Organic Chemistry and Biochemistry, RVO: 61388963 The Czech Science Foundation grant 20-03691X
- Army Research Laboratory and Army Research Office grant W911NF-15-1-0435 National Science Foundation grant CHE 1900226 DARPA grant HR00111810006 University of Colorado Boulder
- Army Research Laboratory and Army Research Office grant W911NF-15-1-0435 National Science Foundation grant CHE 1900226 University of Colorado Boulder
- University of Colorado Boulder Research Computing Group, funded by National Science Foundation grants ACI-1532235 and ACI-1532236, and Colorado State University Institute of Organic Chemistry and Biochemistry, RVO: 61388963 The Czech Science Foundation grant 20-03691X Czech Ministry of Education, Youth and Sports grant e-INFRA CZ, ID:90140 Wallonia-Brussels International Excellence Grant (IR)
- Department of Energy Office of Science, BES, Division of Chemical Sciences, Geosciences and Biosciences, Solar Photochemistry. The views expressed in the article do not necessarily represent the views of the Department of Energy or the U.S. Government. Alliance for Sustainable Energy, LLC, operating NREL for Department of Energy grant DE-AC36-08GO28308
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Affiliation(s)
- Thomas F Magnera
- Department of Chemistry, University of Colorado, Boulder, CO, 80309, USA
| | - Paul I Dron
- Department of Chemistry, University of Colorado, Boulder, CO, 80309, USA
- Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Prague, Czech Republic
| | - Jared P Bozzone
- Department of Chemistry, University of Colorado, Boulder, CO, 80309, USA
| | - Milena Jovanovic
- Department of Chemistry, University of Colorado, Boulder, CO, 80309, USA
| | - Igor Rončević
- Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Prague, Czech Republic
| | - Edward Tortorici
- Department of Physics, University of Colorado, Boulder, CO, 80309, USA
| | - Wei Bu
- ChemMatCARS, University of Chicago, Lemont, IL, 60439, USA
| | - Elisa M Miller
- Chemistry and Nanoscience Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA
| | - Charles T Rogers
- Department of Physics, University of Colorado, Boulder, CO, 80309, USA
- Renewable and Sustainable Energy Institute (RASEI) at the University of Colorado, Boulder, CO, 80303, USA
| | - Josef Michl
- Department of Chemistry, University of Colorado, Boulder, CO, 80309, USA.
- Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Prague, Czech Republic.
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2
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Qiu F, Gong ZY, Cao D, Song C, Tian G, Duan S, Luo Y. Optical Images of Molecular Vibronic Couplings from Tip-Enhanced Fluorescence Excitation Spectroscopy. JACS AU 2022; 2:150-158. [PMID: 35098231 PMCID: PMC8790811 DOI: 10.1021/jacsau.1c00442] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/06/2021] [Indexed: 06/14/2023]
Abstract
Tip-based photoemission spectroscopic techniques have now achieved subnanometer resolution that allows visualization of the chemical structure and even the ground-state vibrational modes of a single molecule. However, the ability to visualize the interplay between electronic and nuclear motions of excited states, i.e., vibronic couplings, is yet to be explored. Herein, we theoretically propose a new technique, namely, tip-enhanced fluorescence excitation (TEFE). TEFE takes advantage of the highly confined plasmonic field and thus can offer a possibility to directly visualize the vibronic effect of a single molecule in real space for arbitrary excited states in a given energy window. Numerical simulations for a single porphine molecule confirm that vibronic couplings originating from Herzberg-Teller (HT) active modes can be visually identified. TEFE further enables high-order vibrational transitions that are normally suppressed in the other plasmon-based processes. Images of the combination vibrational transitions have the same pattern as that of their parental HT active mode's fundamental transition, providing a direct protocol for measurements of the activity of Franck-Condon modes of selected excited states. These findings strongly suggest that TEFE is a powerful strategy to identify the involvement of molecular moieties in the complicated electron-nuclear interactions of the excited states at the single-molecule level.
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Affiliation(s)
- Feifei Qiu
- State
Key Laboratory of Metastable Materials Science & Technology and
Key Laboratory for Microstructural Material Physics of Hebei Province,
School of Science, Yanshan University, Qinhuangdao 066004, P.R. China
| | - Zu-Yong Gong
- Collaborative
Innovation Center of Chemistry for Energy Materials, Shanghai Key
Laboratory of Molecular Catalysis and Innovative Materials, MOE Key
Laboratory of Computational Physical Sciences, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
| | - Dongwei Cao
- State
Key Laboratory of Metastable Materials Science & Technology and
Key Laboratory for Microstructural Material Physics of Hebei Province,
School of Science, Yanshan University, Qinhuangdao 066004, P.R. China
| | - Ce Song
- Hefei
National Laboratory for Physical Sciences at the Microscale and Synergetic
Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026 Anhui, P.R. China
- Department
of Theoretical Chemistry and Biology, School of Engineering Sciences
in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, S-106 91 Stockholm, Sweden
| | - Guangjun Tian
- State
Key Laboratory of Metastable Materials Science & Technology and
Key Laboratory for Microstructural Material Physics of Hebei Province,
School of Science, Yanshan University, Qinhuangdao 066004, P.R. China
| | - Sai Duan
- Collaborative
Innovation Center of Chemistry for Energy Materials, Shanghai Key
Laboratory of Molecular Catalysis and Innovative Materials, MOE Key
Laboratory of Computational Physical Sciences, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
| | - Yi Luo
- Hefei
National Laboratory for Physical Sciences at the Microscale and Synergetic
Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026 Anhui, P.R. China
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3
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Klein BP, Hall SJ, Maurer RJ. The nuts and bolts of core-hole constrained ab initiosimulation for K-shell x-ray photoemission and absorption spectra. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2021; 33. [PMID: 33682682 DOI: 10.1088/1361-648x/abdf00] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2020] [Accepted: 01/22/2021] [Indexed: 05/13/2023]
Abstract
X-ray photoemission (XPS) and near edge x-ray absorption fine structure (NEXAFS) spectroscopy play an important role in investigating the structure and electronic structure of materials and surfaces.Ab initiosimulations provide crucial support for the interpretation of complex spectra containing overlapping signatures. Approximate core-hole simulation methods based on density functional theory (DFT) such as the delta-self-consistent-field (ΔSCF) method or the transition potential (TP) method are widely used to predictK-shell XPS and NEXAFS signatures of organic molecules, inorganic materials and metal-organic interfaces at reliable accuracy and affordable computational cost. We present the numerical and technical details of our variants of the ΔSCF and TP method (coined ΔIP-TP) to simulate XPS and NEXAFS transitions. Using exemplary molecules in gas-phase, in bulk crystals, and at metal-organic interfaces, we systematically assess how practical simulation choices affect the stability and accuracy of simulations. These include the choice of exchange-correlation functional, basis set, the method of core-hole localization, and the use of periodic boundary conditions (PBC). We particularly focus on the choice of aperiodic or periodic description of systems and how spurious charge effects in periodic calculations affect the simulation outcomes. For the benefit of practitioners in the field, we discuss sensible default choices, limitations of the methods, and future prospects.
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Affiliation(s)
- Benedikt P Klein
- Department of Chemistry, University of Warwick, Gibbet Hill Rd, Coventry, CV4 7AL, United Kingdom
- Diamond Light Source, Harwell Science and Innovation Campus, Didcot, OX11 0DE, United Kingdom
| | - Samuel J Hall
- Department of Chemistry, University of Warwick, Gibbet Hill Rd, Coventry, CV4 7AL, United Kingdom
- MAS CDT, Senate House, University of Warwick, Gibbet Hill Rd, Coventry, CV4 7AL, United Kingdom
| | - Reinhard J Maurer
- Department of Chemistry, University of Warwick, Gibbet Hill Rd, Coventry, CV4 7AL, United Kingdom
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4
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Prospects for microwave plasma synthesized N-graphene in secondary electron emission mitigation applications. Sci Rep 2020; 10:13013. [PMID: 32747630 PMCID: PMC7398926 DOI: 10.1038/s41598-020-69844-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2020] [Accepted: 07/13/2020] [Indexed: 11/09/2022] Open
Abstract
The ability to change the secondary electron emission properties of nitrogen-doped graphene (N-graphene) has been demonstrated. To this end, a novel microwave plasma-enabled scalable route for continuous and controllable fabrication of free-standing N-graphene sheets was developed. High-quality N-graphene with prescribed structural qualities was produced at a rate of 0.5 mg/min by tailoring the high energy density plasma environment. Up to 8% of nitrogen doping levels were achieved while keeping the oxygen content at residual amounts (~ 1%). The synthesis is accomplished via a single step, at atmospheric conditions, using ethanol/methane and ammonia/methylamine as carbon and nitrogen precursors. The type and level of doping is affected by the position where the N-precursor is injected in the plasma environment and by the type of precursors used. Importantly, N atoms incorporated predominantly in pyridinic/pyrrolic functional groups alter the performance of the collective electronic oscillations, i.e. plasmons, of graphene. For the first time it has been demonstrated that the synergistic effect between the electronic structure changes and the reduction of graphene π-plasmons caused by N doping, along with the peculiar "crumpled" morphology, leads to sub-unitary (< 1) secondary electron yields. N-graphene can be considered as a prospective low secondary electron emission and plasmonic material.
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5
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Photocatalytic degradation and adsorption of phenol by solvent-controlled TiO2 nanosheets assisted with H2O2 and FeCl3: Kinetic, isotherm and thermodynamic analysis. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.112941] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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6
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Wechsler D, Fernández CC, Tariq Q, Tsud N, Prince KC, Williams FJ, Steinrück HP, Lytken O. Interfacial Reactions of Tetraphenylporphyrin with Cobalt-Oxide Thin Films. Chemistry 2019; 25:13197-13201. [PMID: 31403232 DOI: 10.1002/chem.201902680] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Revised: 08/08/2019] [Indexed: 11/07/2022]
Abstract
We have studied the adsorption and interfacial reactions of 2H-tetraphenylporphyrin (2HTPP) with cobalt-terminated Co3 O4 (111) and oxygen-terminated CoO(111) thin films using synchrotron-radiation X-ray photoelectron spectroscopy. Already at 275 K, we find evidence for the formation of a metalated species, most likely CoTPP, on both surfaces. The degree of self-metalation increases with temperature on both surfaces until 475 K, where the metalation is almost complete. At 575 K the porphyrin coverage decreases drastically on the reducible cobalt-terminated Co3 O4 (111) surface, while higher temperatures are needed on the non-reducible oxygen-terminated CoO(111). The low temperature self-metalation is similar to that observed on MgO(100) surfaces, but drastically different from that observed on TiO2 (110), where no self-metalation is observed at room temperature.
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Affiliation(s)
- Daniel Wechsler
- Chair of Physical Chemistry II, University Erlangen-Nürnberg, Egerlandstraße 3, 91058, Erlangen, Germany
| | - Cynthia C Fernández
- Departamento de Química Inorgánica, AnalíticayQuímica Física, Facultad de Ciencias ExactasyNaturales, INQUIMAE-CONICET, Universidad de Buenos Aires, Pabellón 2, Buenos Aires, C1428EHA, Argentina
| | - Quratulain Tariq
- Chair of Physical Chemistry II, University Erlangen-Nürnberg, Egerlandstraße 3, 91058, Erlangen, Germany
| | - Nataliya Tsud
- Elettra-Sincrotrone Trieste S.C.p.A., Strada Statale 14, km 163.5, 34149, Basovizza-Trieste, Italy
| | - Kevin C Prince
- Elettra-Sincrotrone Trieste S.C.p.A., Strada Statale 14, km 163.5, 34149, Basovizza-Trieste, Italy.,IOM, Strada Statale 14, km 163.5, 34149, Basovizza-Trieste, Italy
| | - Federico J Williams
- Chair of Physical Chemistry II, University Erlangen-Nürnberg, Egerlandstraße 3, 91058, Erlangen, Germany.,Departamento de Química Inorgánica, AnalíticayQuímica Física, Facultad de Ciencias ExactasyNaturales, INQUIMAE-CONICET, Universidad de Buenos Aires, Pabellón 2, Buenos Aires, C1428EHA, Argentina
| | - Hans-Peter Steinrück
- Chair of Physical Chemistry II, University Erlangen-Nürnberg, Egerlandstraße 3, 91058, Erlangen, Germany
| | - Ole Lytken
- Chair of Physical Chemistry II, University Erlangen-Nürnberg, Egerlandstraße 3, 91058, Erlangen, Germany
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7
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Biomimetic Properties of Force-Spun PHBV Membranes Functionalised with Collagen as Substrates for Biomedical Application. COATINGS 2019. [DOI: 10.3390/coatings9060350] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The force-spinning process parameters (i.e., spin speed, spinneret-collector distance, and polymer concentration), optimised and characterised in previous work by this group, allowed the rapid fabrication of large quantities of high surface area poly(3-hydroxybutyric acid-co-3-hydroxyvaleric acid) (PHBV) polymeric fibre membranes. This paper examined the potential application for force-spun PHBV fibres functionalised with type I collagen for tissue regeneration applications. PHBV fibre scaffolds provide a biologically suitable substrate to guide the regeneration of dermal tissues, however, have poor cellular adhesion properties. The grafting of collagen type-I to PHBV fibres demonstrated improved cell adhesion and growth in Neo-NHDF (neonatal human dermal fibroblasts) fibroblasts. The examination of fibre morphology, thermal properties, collagen content, and degradability was used to contrast the physicochemical properties of the PHBV and PHBV-Collagen fibres. Biodegradation models using phosphate buffered saline determined there was no appreciable change in mass over the course of 6 weeks; a Sirius Red assay was performed on degraded samples, showing no change in the quantity of collagen. Cell metabolism studies showed an increase in cell metabolism on conjugated samples after three and 7 days. In addition, in vitro cytocompatibility studies demonstrated superior cell activity and adhesion on conjugated samples over 7 days.
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8
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Buimaga-Iarinca L, Morari C. The effect of translation on the binding energy for transition-metal porphyrines adsorbed on Ag(111) surface. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2019; 10:706-717. [PMID: 30931212 PMCID: PMC6423576 DOI: 10.3762/bjnano.10.70] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/17/2018] [Accepted: 02/22/2019] [Indexed: 06/09/2023]
Abstract
The characteristics of interaction between six transition-metal porphyrines and the Ag(111) surface are detailed here as resulted from DFT calculations. Van der Waals interactions as well as the strong correlation in 3d orbitals of transition metals were taken into account in all calculations, including the structural relaxation. For each system we investigate four relative positions of the metallic atom on top the surface. We show that the interaction between the transition metal and silver is the result of a combination between the dispersion interaction, charge transfer and weak chemical interaction. The detailed analysis of the physical properties, such as dipolar and magnetic moments and the molecule-surface charge transfer, analyzed for different geometric configurations allows us to propose qualitative models, relevant for the understanding of the self-assembly processes and related phenomena.
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Affiliation(s)
- Luiza Buimaga-Iarinca
- National Institute for Research and Development of Isotopic and Molecular Technologies,67-103 Donat, 400293 Cluj-Napoca, Romania
| | - Cristian Morari
- National Institute for Research and Development of Isotopic and Molecular Technologies,67-103 Donat, 400293 Cluj-Napoca, Romania
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9
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Chen G, Zhong W, Li Y, Deng Q, Ou X, Pan Q, Wang X, Xiong X, Yang C, Liu M. Rational Design of TiO-TiO 2 Heterostructure/Polypyrrole as a Multifunctional Sulfur Host for Advanced Lithium-Sulfur Batteries. ACS APPLIED MATERIALS & INTERFACES 2019; 11:5055-5063. [PMID: 30656928 DOI: 10.1021/acsami.8b19501] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Despite outstanding theoretical energy density (2600 Wh kg-1) and low cost of lithium-sulfur (Li-S) batteries, their practical application is seriously hindered by inferior cycle performance and low Coulombic efficiency due to the "shuttle effect" of lithium polysulfides (LiPSs). Herein, we proposed a strategy that combines TiO-TiO2 heterostructure materials (H-TiO x, x = 1, 2) and conductive polypyrrole (PPy) to form a multifunctional sulfur host. Initially, the TiO-TiO2 heterostructure can enhance the redox reaction kinetics of sulfur species and improve the conductivity of sulfur cathode together with the PPy coating layer. Moreover, the defect-abundant H-TiO x matrices can trap LiPSs by the formation of Ti-S bond via the Lewis acid-base interaction. Furthermore, the PPy coating can physically hinder the diffusion of LiPSs, as well as chemically adsorb LiPSs by the polar-polar mechanism. Benefiting from the synergistic effect of H-TiO x and PPy layer, the novel cathode delivered high specific capacities at different current rates (1130, 990, 932, 862, and 726 mAh g-1 at 0.1, 0.2, 0.3, 0.5, and 1C, respectively) and an ultralow capacity decay of 0.0406% per cycle after 1000 cycles at 1C. This work can not only indicate effectiveness of employing H-TiO x materials to realize the LiPSs immobilization but also shed light on the feasibility of combining different materials to achieve the multifunctional sulfur hosts for advanced Li-S batteries.
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Affiliation(s)
| | | | | | | | | | | | | | | | | | - Meilin Liu
- School of Materials Science and Engineering , Georgia Institute of Technology , Atlanta , Georgia 30332-0245 , United States
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10
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In-situ formation of polymer stabilized copper nanoparticles: A hybrid system with non-volatile switchable resistive property. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2018.09.073] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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11
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Susha N, Nandakumar K, Nair SS. Enhanced photoconductivity in CdS/betanin composite nanostructures. RSC Adv 2018; 8:11330-11337. [PMID: 35542820 PMCID: PMC9079048 DOI: 10.1039/c7ra13116j] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2017] [Accepted: 03/07/2018] [Indexed: 11/21/2022] Open
Abstract
The synthesis is described of inorganic/organic hybrid nanostructured composites based on CdS/betanin with enhanced photoconductivity due to the transfer of photogenerated electrons from the conduction band of betanin to the conduction band of CdS.
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Affiliation(s)
- N. Susha
- Dept. of Physics
- Central University of Kerala
- India – 671314
| | - K. Nandakumar
- International and Inter University Centre for Nanoscience and Nanotechnology
- Mahatma Gandhi University
- India – 686 560
| | - Swapna S. Nair
- Dept. of Physics
- Central University of Kerala
- India – 671314
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12
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Jiang L, Zhang B, Médard G, Seitsonen AP, Haag F, Allegretti F, Reichert J, Kuster B, Barth JV, Papageorgiou AC. N-Heterocyclic carbenes on close-packed coinage metal surfaces: bis-carbene metal adatom bonding scheme of monolayer films on Au, Ag and Cu. Chem Sci 2017; 8:8301-8308. [PMID: 29619176 PMCID: PMC5858017 DOI: 10.1039/c7sc03777e] [Citation(s) in RCA: 69] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2017] [Accepted: 09/27/2017] [Indexed: 12/21/2022] Open
Abstract
By means of scanning tunnelling microscopy (STM), complementary density functional theory (DFT) and X-ray photoelectron spectroscopy (XPS) we investigate the binding and self-assembly of a saturated molecular layer of model N-heterocyclic carbene (NHC) on Cu(111), Ag(111) and Au(111) surfaces under ultra-high vacuum (UHV) conditions. XPS reveals that at room temperature, coverages up to a monolayer exist, with the molecules engaged in metal carbene bonds. On all three surfaces, we resolve similar arrangements, which can be interpreted only in terms of mononuclear M(NHC)2 (M = Cu, Ag, Au) complexes, reminiscent of the paired bonding of thiols to surface gold adatoms. Theoretical investigations for the case of Au unravel the charge distribution of a Au(111) surface covered by Au(NHC)2 and reveal that this is the energetically preferential adsorption configuration.
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Affiliation(s)
- Li Jiang
- Chair of Molecular Nanoscience and Chemical Physics of Interfaces (E20) , Department of Physics , Technical University of Munich , D-85748 Garching , Germany .
| | - Bodong Zhang
- Chair of Molecular Nanoscience and Chemical Physics of Interfaces (E20) , Department of Physics , Technical University of Munich , D-85748 Garching , Germany .
| | - Guillaume Médard
- Chair of Proteomics and Bioanalytics , Technical University of Munich , Emil-Erlenmeyer-Forum 5 , D-85354 Freising , Germany
| | - Ari Paavo Seitsonen
- Département de Chimie , Ecole Normale Supérieure (ENS) , Paris Cedex 05 F-75230 , France
| | - Felix Haag
- Chair of Molecular Nanoscience and Chemical Physics of Interfaces (E20) , Department of Physics , Technical University of Munich , D-85748 Garching , Germany .
| | - Francesco Allegretti
- Chair of Molecular Nanoscience and Chemical Physics of Interfaces (E20) , Department of Physics , Technical University of Munich , D-85748 Garching , Germany .
| | - Joachim Reichert
- Chair of Molecular Nanoscience and Chemical Physics of Interfaces (E20) , Department of Physics , Technical University of Munich , D-85748 Garching , Germany .
| | - Bernhard Kuster
- Chair of Proteomics and Bioanalytics , Technical University of Munich , Emil-Erlenmeyer-Forum 5 , D-85354 Freising , Germany
| | - Johannes V Barth
- Chair of Molecular Nanoscience and Chemical Physics of Interfaces (E20) , Department of Physics , Technical University of Munich , D-85748 Garching , Germany .
| | - Anthoula C Papageorgiou
- Chair of Molecular Nanoscience and Chemical Physics of Interfaces (E20) , Department of Physics , Technical University of Munich , D-85748 Garching , Germany .
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13
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Diller K, Maurer RJ, Müller M, Reuter K. Interpretation of x-ray absorption spectroscopy in the presence of surface hybridization. J Chem Phys 2017; 146:214701. [PMID: 28576083 PMCID: PMC5453787 DOI: 10.1063/1.4984072] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2017] [Accepted: 05/11/2017] [Indexed: 11/15/2022] Open
Abstract
X-ray absorption spectroscopy (XAS) yields direct access to the electronic and geometric structure of hybrid inorganic-organic interfaces formed upon adsorption of complex molecules at metal surfaces. The unambiguous interpretation of corresponding spectra is challenged by the intrinsic geometric flexibility of the adsorbates and the chemical interactions with the interface. Density-functional theory (DFT) calculations of the extended adsorbate-substrate system are an established tool to guide peak assignment in X-ray photoelectron spectroscopy of complex interfaces. We extend this to the simulation and interpretation of XAS data in the context of functional organic molecules on metal surfaces using dispersion-corrected DFT calculations within the transition potential approach. For the prototypical case of 2H-porphine adsorbed on Ag(111) and Cu(111) substrates, we follow the two main effects of the molecule/surface interaction onto the X-ray absorption signatures: (1) the substrate-induced chemical shift of the 1s core levels that dominates in physisorbed systems and (2) the hybridization-induced broadening and loss of distinct resonances that dominate in more chemisorbed systems.
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Affiliation(s)
- Katharina Diller
- Department Chemie, Technische Universität München, D-85747 Garching, Germany
| | - Reinhard J Maurer
- Department Chemie, Technische Universität München, D-85747 Garching, Germany
| | - Moritz Müller
- Department Chemie, Technische Universität München, D-85747 Garching, Germany
| | - Karsten Reuter
- Department Chemie, Technische Universität München, D-85747 Garching, Germany
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14
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Daniel Q, Ambre RB, Zhang B, Philippe B, Chen H, Li F, Fan K, Ahmadi S, Rensmo H, Sun L. Re-Investigation of Cobalt Porphyrin for Electrochemical Water Oxidation on FTO Surface: Formation of CoOx as Active Species. ACS Catal 2017. [DOI: 10.1021/acscatal.6b01815] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Quentin Daniel
- Department
of Chemistry, School of Chemical Science and Engineering, KTH Royal Institute of Technology, 100 44 Stockholm, Sweden
| | - Ram B. Ambre
- Department
of Chemistry, School of Chemical Science and Engineering, KTH Royal Institute of Technology, 100 44 Stockholm, Sweden
| | - Biaobiao Zhang
- Department
of Chemistry, School of Chemical Science and Engineering, KTH Royal Institute of Technology, 100 44 Stockholm, Sweden
| | - Bertrand Philippe
- Department
of Physics and Astronomy, Uppsala University, Box 516, 751 20, Uppsala, Sweden
| | - Hong Chen
- Department
of Chemistry, School of Chemical Science and Engineering, KTH Royal Institute of Technology, 100 44 Stockholm, Sweden
| | - Fusheng Li
- Department
of Chemistry, School of Chemical Science and Engineering, KTH Royal Institute of Technology, 100 44 Stockholm, Sweden
| | - Ke Fan
- Department
of Chemistry, School of Chemical Science and Engineering, KTH Royal Institute of Technology, 100 44 Stockholm, Sweden
| | - Sareh Ahmadi
- Department
of Physics and Astronomy, Uppsala University, Box 516, 751 20, Uppsala, Sweden
| | - Håkan Rensmo
- Department
of Physics and Astronomy, Uppsala University, Box 516, 751 20, Uppsala, Sweden
| | - Licheng Sun
- Department
of Chemistry, School of Chemical Science and Engineering, KTH Royal Institute of Technology, 100 44 Stockholm, Sweden
- State
Key Laboratory of Fine Chemicals, DUT-KTH Joint Education and Research
Center on Molecular Devices, Dalian University of Technology (DUT), 116024 Dalian, China
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15
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Diller K, Papageorgiou AC, Klappenberger F, Allegretti F, Barth JV, Auwärter W. In vacuo interfacial tetrapyrrole metallation. Chem Soc Rev 2016; 45:1629-56. [PMID: 26781034 DOI: 10.1039/c5cs00207a] [Citation(s) in RCA: 61] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The metallation of tetrapyrroles at well-defined surfaces under ultra-high vacuum conditions represents an unconventional synthesis approach to achieve tetrapyrrole-based metal-organic complexes and architectures. Different protocols, pioneered over the last decade, and now widely applied in several fields, provide an elegant route to metallo-tetrapyrrole systems often elusive to conventional procedures and give access and exquisite insight into on-surface tetrapyrrole chemistry. As highlighted by the functionality of metallo-porphyrins in biological or other environments and by the eminent role of metallo-phthalocyanines in synthetic materials, the control on the metal centres incorporated into the macrocycle is of utmost importance to achieve tailored properties in tetrapyrrole-based nanosystems. In the on-surface scenario, precise metallation pathways were developed, including reactions of tetrapyrroles with metals supplied by physical vapour deposition, chemical vapour deposition or the tip of a scanning tunnelling microscope, and self-metallation by atoms of an underlying support. Herein, we provide a comprehensive overview of in vacuo tetrapyrrole metallation, addressing two-dimensional as well as three-dimensional systems. Furthermore, we comparatively assess the available library of on-surface metallation protocols and elaborate on the state-of-the-art methodology.
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Affiliation(s)
- Katharina Diller
- Physik-Department E20, Technische Universität München (TUM), James-Franck-Str. 1, 85748 Garching, Germany. and Institute of Condensed Matter Physics (ICMP), École Polytechnique Fédérale de Lausanne (EPFL), Station 3, CH-1015 Lausanne, Switzerland.
| | - Anthoula C Papageorgiou
- Physik-Department E20, Technische Universität München (TUM), James-Franck-Str. 1, 85748 Garching, Germany.
| | - Florian Klappenberger
- Physik-Department E20, Technische Universität München (TUM), James-Franck-Str. 1, 85748 Garching, Germany.
| | - Francesco Allegretti
- Physik-Department E20, Technische Universität München (TUM), James-Franck-Str. 1, 85748 Garching, Germany.
| | - Johannes V Barth
- Physik-Department E20, Technische Universität München (TUM), James-Franck-Str. 1, 85748 Garching, Germany.
| | - Willi Auwärter
- Physik-Department E20, Technische Universität München (TUM), James-Franck-Str. 1, 85748 Garching, Germany.
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16
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Müller M, Diller K, Maurer RJ, Reuter K. Interfacial charge rearrangement and intermolecular interactions: Density-functional theory study of free-base porphine adsorbed on Ag(111) and Cu(111). J Chem Phys 2016; 144:024701. [PMID: 26772581 DOI: 10.1063/1.4938259] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We employ dispersion-corrected density-functional theory to study the adsorption of tetrapyrrole 2H-porphine (2H-P) at Cu(111) and Ag(111). Various contributions to adsorbate-substrate and adsorbate-adsorbate interactions are systematically extracted to analyze the self-assembly behavior of this basic building block to porphyrin-based metal-organic nanostructures. This analysis reveals a surprising importance of substrate-mediated van der Waals interactions between 2H-P molecules, in contrast to negligible direct dispersive interactions. The resulting net repulsive interactions rationalize the experimentally observed tendency for single molecule adsorption.
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Affiliation(s)
- Moritz Müller
- Department Chemie, Technische Universität München, D-85747 Garching, Germany
| | - Katharina Diller
- Department Chemie, Technische Universität München, D-85747 Garching, Germany
| | - Reinhard J Maurer
- Department Chemie, Technische Universität München, D-85747 Garching, Germany
| | - Karsten Reuter
- Department Chemie, Technische Universität München, D-85747 Garching, Germany
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17
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Ramasesha K, Leone SR, Neumark DM. Real-Time Probing of Electron Dynamics Using Attosecond Time-Resolved Spectroscopy. Annu Rev Phys Chem 2016; 67:41-63. [DOI: 10.1146/annurev-physchem-040215-112025] [Citation(s) in RCA: 136] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Krupa Ramasesha
- Department of Chemistry, University of California, Berkeley, California 94720;
- Combustion Research Facility, Sandia National Laboratories, Livermore, California 94550
| | - Stephen R. Leone
- Department of Chemistry, University of California, Berkeley, California 94720;
- Department of Physics, University of California, Berkeley, California 94720
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720
| | - Daniel M. Neumark
- Department of Chemistry, University of California, Berkeley, California 94720;
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720
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18
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Smykalla L, Shukrynau P, Mende C, Lang H, Knupfer M, Hietschold M. Photoelectron spectroscopy investigation of the temperature-induced deprotonation and substrate-mediated hydrogen transfer in a hydroxyphenyl-substituted porphyrin. Chem Phys 2015. [DOI: 10.1016/j.chemphys.2015.02.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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