1
|
Reuhl M, Vogel M. Temperature-Dependent Dynamics at Protein-Solvent Interfaces. J Chem Phys 2022; 157:074705. [DOI: 10.1063/5.0105062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We perform differential scanning calorimetry, broadband dielectric spectroscopy (BDS), and nuclear magnetic resonance (NMR) studies to ascertain the molecular dynamics in mixtures of ethylene glycol with elastin or lysozyme over broad temperature ranges. To focus on the protein-solvent interface, we use mixtures with about equal numbers of amino acids and solvent molecules. The elastin and lysozyme mixtures show similar glass transition steps, which extend over a broad temperature range of 157-185K. The BDS and NMR studies yield fully consistent results for the fastest process P1, which is caused by the structural relaxation of ethylene glycol between the protein molecules and follows an Arrhenius law with an activation energy of Ea=0.63eV. It involves quasi-isotropic reorientation and is very similar in the elastin and lysozyme matrices but different from the alpha and beta relaxations of bulk ethylene glycol. Two slower BDS processes P2 and P3 have protein-dependent time scales, but exhibit a similar Arrhenius-like temperature dependence with an activation energy of Ea~0.81eV. However, P2 and P3 do not have a clear NMR signature. In particular, the NMR results for the lysozyme mixture reveal that the protein backbone does not show isotropic alpha-like motion on the P2 and P3 time scales but only restricted beta-like reorientation. The different activation energies of the P1 and P2/P3 processes do not support an intimate coupling of protein and ethylene glycol dynamics. The present results are compared with previous findings for mixtures of proteins with water or glycerol, implying qualitatively different dynamical couplings at various protein-solvent interfaces.
Collapse
Affiliation(s)
| | - Michael Vogel
- Institute of Condensed Matter Physics, TU Darmstadt, Germany
| |
Collapse
|
2
|
Becher M, Lichtinger A, Minikejew R, Vogel M, Rössler EA. NMR Relaxometry Accessing the Relaxation Spectrum in Molecular Glass Formers. Int J Mol Sci 2022; 23:ijms23095118. [PMID: 35563506 PMCID: PMC9105706 DOI: 10.3390/ijms23095118] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 04/29/2022] [Accepted: 04/29/2022] [Indexed: 12/10/2022] Open
Abstract
It is a longstanding question whether universality or specificity characterize the molecular dynamics underlying the glass transition of liquids. In particular, there is an ongoing debate to what degree the shape of dynamical susceptibilities is common to various molecular glass formers. Traditionally, results from dielectric spectroscopy and light scattering have dominated the discussion. Here, we show that nuclear magnetic resonance (NMR), primarily field-cycling relaxometry, has evolved into a valuable method, which provides access to both translational and rotational motions, depending on the probe nucleus. A comparison of 1H NMR results indicates that translation is more retarded with respect to rotation for liquids with fully established hydrogen-bond networks; however, the effect is not related to the slow Debye process of, for example, monohydroxy alcohols. As for the reorientation dynamics, the NMR susceptibilities of the structural (α) relaxation usually resemble those of light scattering, while the dielectric spectra of especially polar liquids have a different broadening, likely due to contributions from cross correlations between different molecules. Moreover, NMR relaxometry confirms that the excess wing on the high-frequency flank of the α-process is a generic relaxation feature of liquids approaching the glass transition. However, the relevance of this feature generally differs between various methods, possibly because of their different sensitivities to small-amplitude motions. As a major advantage, NMR is isotope specific; hence, it enables selective studies on a particular molecular entity or a particular component of a liquid mixture. Exploiting these possibilities, we show that the characteristic Cole-Davidson shape of the α-relaxation is retained in various ionic liquids and salt solutions, but the width parameter may differ for the components. In contrast, the low-frequency flank of the α-relaxation can be notably broadened for liquids in nanoscopic confinements. This effect also occurs in liquid mixtures with a prominent dynamical disparity in their components.
Collapse
Affiliation(s)
- Manuel Becher
- Nordbayerisches NMR Zentrum, Universität Bayreuth, 95440 Bayreuth, Germany; (M.B.); (A.L.); (R.M.)
| | - Anne Lichtinger
- Nordbayerisches NMR Zentrum, Universität Bayreuth, 95440 Bayreuth, Germany; (M.B.); (A.L.); (R.M.)
| | - Rafael Minikejew
- Nordbayerisches NMR Zentrum, Universität Bayreuth, 95440 Bayreuth, Germany; (M.B.); (A.L.); (R.M.)
| | - Michael Vogel
- Institut für Physik Kondensierter Materie, Technische Universität Darmstadt, 64289 Darmstadt, Germany;
| | - Ernst A. Rössler
- Nordbayerisches NMR Zentrum, Universität Bayreuth, 95440 Bayreuth, Germany; (M.B.); (A.L.); (R.M.)
- Correspondence:
| |
Collapse
|
3
|
Damodaran K. Recent advances in NMR spectroscopy of ionic liquids. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2022; 129:1-27. [PMID: 35292132 DOI: 10.1016/j.pnmrs.2021.12.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Revised: 12/17/2021] [Accepted: 12/28/2021] [Indexed: 06/14/2023]
Abstract
This review presents recent developments in the application of NMR spectroscopic techniques in the study of ionic liquids. NMR has been the primary tool not only for the structural characterization of ionic liquids, but also for the study of dynamics. The presence of a host of NMR active nuclei in ionic liquids permits widespread use of multinuclear NMR experiments. Chemical shifts and multinuclear coupling constants are used routinely for the structure elucidation of ionic liquids and of products formed by their covalent interactions with other materials. Also, the availability of a multitude of NMR techniques has facilitated the study of dynamical processes in them. These include the use of NOESY to study inter-ionic interactions, pulsed-field gradient techniques for probing transport properties, and relaxation measurements to elucidate rotational dynamics. This review will focus on the application of each of these techniques to investigate ionic liquids.
Collapse
Affiliation(s)
- Krishnan Damodaran
- Department of Chemistry, University of Pittsburgh, Pittsburgh, PA 15260, United States.
| |
Collapse
|
4
|
Probing Small-Angle Molecular Motions with EPR Spectroscopy: Dynamical Transition and Molecular Packing in Disordered Solids. MAGNETOCHEMISTRY 2022. [DOI: 10.3390/magnetochemistry8020019] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Disordered molecular solids present a rather broad class of substances of different origin—amorphous polymers, materials for photonics and optoelectronics, amorphous pharmaceutics, simple molecular glass formers, and others. Frozen biological media in many respects also may be referred to this class. Theoretical description of dynamics and structure of disordered solids still does not exist, and only some phenomenological models can be developed to explain results of particular experiments. Among different experimental approaches, electron paramagnetic resonance (EPR) applied to spin probes and labels also can deliver useful information. EPR allows probing small-angle orientational molecular motions (molecular librations), which intrinsically are inherent to all molecular solids. EPR is employed in its conventional continuous wave (CW) and pulsed—electron spin echo (ESE)—versions. CW EPR spectra are sensitive to dynamical librations of molecules while ESE probes stochastic molecular librations. In this review, different manifestations of small-angle motions in EPR of spin probes and labels are discussed. It is shown that CW-EPR-detected dynamical librations provide information on dynamical transition in these media, similar to that explored with neutron scattering, and ESE-detected stochastic librations allow elucidating some features of nanoscale molecular packing. The possible EPR applications are analyzed for gel-phase lipid bilayers, for biological membranes interacting with proteins, peptides and cryoprotectants, for supercooled ionic liquids (ILs) and supercooled deep eutectic solvents (DESs), for globular proteins and intrinsically disordered proteins (IDPs), and for some other molecular solids.
Collapse
|
5
|
Pabst F, Kraus J, Kloth S, Steinrücken E, Kruteva M, Radulescu A, Vogel M, Blochowicz T. Evidence of supercoolable nanoscale water clusters in an amorphous ionic liquid matrix. J Chem Phys 2021; 155:174501. [PMID: 34742203 DOI: 10.1063/5.0066180] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
Nanoscale water clusters in an ionic liquid matrix, also called "water pockets," were previously found in some mixtures of water with ionic liquids containing hydrophilic anions. However, in these systems, at least partial crystallization occurs upon supercooling. In this work, we show for mixtures of 1-butyl-3-methylimidazolium dicyanamide with water that none of the components crystallizes up to a water content of 72 mol. %. The dynamics of the ionic liquid matrix is monitored from above room temperature down to the glass transition by combining depolarized dynamic light scattering with broadband dielectric and nuclear magnetic resonance spectroscopy, revealing that the matrix behaves like a common glass former and stays amorphous in the whole temperature range. Moreover, we demonstrate by a combination of Raman spectroscopy, small angle neutron scattering, and molecular dynamics simulation that, indeed, nanoscale water clusters exist in this mixture.
Collapse
Affiliation(s)
- Florian Pabst
- TU Darmstadt, Institute for Condensed Matter Physics, 64289 Darmstadt, Germany
| | - Jennifer Kraus
- TU Darmstadt, Institute for Condensed Matter Physics, 64289 Darmstadt, Germany
| | - Sebastian Kloth
- TU Darmstadt, Institute for Condensed Matter Physics, 64289 Darmstadt, Germany
| | - Elisa Steinrücken
- TU Darmstadt, Institute for Condensed Matter Physics, 64289 Darmstadt, Germany
| | - Margarita Kruteva
- Jülich Centre for Neutron Science JCNS (JCNS-1), Forschungszentrum Jülich GmbH, 52425 Jülich, Germany
| | - Aurel Radulescu
- Jülich Centre for Neutron Science (JCNS) at Heinz Maier-Leibnitz Zentrum (MLZ), Forschungszentrum Jülich GmbH, 85747 Garching, Germany
| | - Michael Vogel
- TU Darmstadt, Institute for Condensed Matter Physics, 64289 Darmstadt, Germany
| | - Thomas Blochowicz
- TU Darmstadt, Institute for Condensed Matter Physics, 64289 Darmstadt, Germany
| |
Collapse
|
6
|
Kloth S, Bernhardt MP, van der Vegt NFA, Vogel M. Coarse-grained model of a nanoscale-segregated ionic liquid for simulations of low-temperature structure and dynamics. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2021; 33:204002. [PMID: 33578395 DOI: 10.1088/1361-648x/abe606] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Accepted: 02/12/2021] [Indexed: 06/12/2023]
Abstract
We perform molecular dynamics simulations to study the structure and dynamics of the ionic liquid [Omim][TFSI] in a broad temperature range. A particular focus is the progressing nanoscale segregation into polar and nonpolar regions upon cooling. As this analysis requires simulations of large systems for long times, we use the iterative Boltzmann inversion method to develop a new coarse-grained (CG) model from a successful all-atom (AA) model. We show that the properties are similar for both levels of description at room temperature, while the CG model shows stronger nanoscale segregation and faster diffusion dynamics than its AA counterpart at low temperatures. Exploiting these features of the CG model, we find that the characteristic length scale of the structural inhomogeneity nearly doubles to ∼3 nm when the temperature is decreased to about 200 K. Moreover, we observe that the nanoscale segregation is characterized by a bicontinuous morphology. In worm-like nonpolar regions, the ends of the octyl rests of the cations preferentially aggregate in the centers, while the other parts of the alkyl chains tend to be aligned parallel on a next-neighbor level and point outward, allowing for an integration of the imidazolium head groups of the cations into polar regions together with the anions, resembling to some degree the molecular arrangement in cylindrical micelles.
Collapse
Affiliation(s)
- Sebastian Kloth
- Institute of Condensed Matter Physics, Technische Universität Darmstadt, Hochschulstr. 6, 64289 Darmstadt, Germany
| | - Marvin P Bernhardt
- Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Technische Universität Darmstadt, 64287 Darmstadt, Germany
| | - Nico F A van der Vegt
- Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Technische Universität Darmstadt, 64287 Darmstadt, Germany
| | - Michael Vogel
- Institute of Condensed Matter Physics, Technische Universität Darmstadt, Hochschulstr. 6, 64289 Darmstadt, Germany
| |
Collapse
|
7
|
Thomann CA, Münzner P, Moch K, Jacquemin J, Goodrich P, Sokolov AP, Böhmer R, Gainaru C. Tuning the dynamics of imidazolium-based ionic liquids via hydrogen bonding. I. The viscous regime. J Chem Phys 2020; 153:194501. [DOI: 10.1063/5.0026144] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Affiliation(s)
- C. A. Thomann
- Fakultät Physik, Technische Universität Dortmund, D-44221 Dortmund, Germany
| | - P. Münzner
- Fakultät Physik, Technische Universität Dortmund, D-44221 Dortmund, Germany
| | - K. Moch
- Fakultät Physik, Technische Universität Dortmund, D-44221 Dortmund, Germany
| | - J. Jacquemin
- Faculté des Sciences et Techniques, Université de Tours, 37200 Tours, France
- QUILL Center, The Queen’s University of Belfast, Belfast BT9 5AG, Northern Ireland, United Kingdom
| | - P. Goodrich
- QUILL Center, The Queen’s University of Belfast, Belfast BT9 5AG, Northern Ireland, United Kingdom
| | - A. P. Sokolov
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37916, USA and Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, USA
| | - R. Böhmer
- Fakultät Physik, Technische Universität Dortmund, D-44221 Dortmund, Germany
| | - C. Gainaru
- Fakultät Physik, Technische Universität Dortmund, D-44221 Dortmund, Germany
| |
Collapse
|