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Risaro J, Lauretta D. SEA PENS (CNIDARIA: OCTOCORALLIA: PENNATULOIDEA) FROM THE MAR DEL PLATA SUBMARINE CANYON AND OUTSKIRTS. Zootaxa 2023; 5389:401-433. [PMID: 38221013 DOI: 10.11646/zootaxa.5389.4.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Indexed: 01/16/2024]
Abstract
During this work, over 200 specimens of sea pens (Anthozoa: Octocorallia: Pennatuloidea), collected in the Mar del Plata submarine canyon and outskirts (38S, up to 3500 m depth) during 2012 and 2013 were analyzed. Of the total, about 160 were identified in seven species of Anthoptilum, Distichoptilum, Kophobelemnon, Pseudumbellula, Solumbellula and Umbellula. Three of those represent new records for the southwestern Atlantic Ocean off Argentina.
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Affiliation(s)
- Jessica Risaro
- Museo Argentino de Ciencias Naturales; Bernardino Rivadavia- CONICET. Av. ngel Gallardo 470; Buenos Aires; Argentina.
| | - Daniel Lauretta
- Museo Argentino de Ciencias Naturales; Bernardino Rivadavia- CONICET. Av. ngel Gallardo 470; Buenos Aires; Argentina.
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Hogan RI, Hopkins K, Wheeler AJ, Yesson C, Allcock AL. Evolution of mitochondrial and nuclear genomes in Pennatulacea. Mol Phylogenet Evol 2023; 178:107630. [PMID: 36182053 DOI: 10.1016/j.ympev.2022.107630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Revised: 08/31/2022] [Accepted: 09/19/2022] [Indexed: 12/14/2022]
Abstract
We examine the phylogeny of sea pens using sequences of whole mitochondrial genomes and the nuclear ribosomal cluster generated through low coverage Illumina sequencing. Taxon sampling includes 30 species in 19 genera representing 13 families. Ancestral state reconstruction shows that most sea pen mitochondrial genomes have the ancestral gene order, and that Pennatulacea with diverse gene orders are found in a single clade. The monophyly of Pennatulidae and Protoptilidae are rejected by both the mitochondrial and nuclear dataset, while the mitochondrial dataset further rejects monophyly of Virgulariidae, and the nuclear dataset rejects monophyly of Kophobelemnidae. We show discordance between nuclear ribosomal gene cluster phylogenies and whole mitochondrial genome phylogenies and highlight key Pennatulacea taxa that could be included in cnidarian genome-wide studies to better resolve the sea pen tree of life. We further illustrate how well frequently sequenced markers capture the overall diversity of the mitochondrial genome and the nuclear ribosomal genes in sea pens.
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Affiliation(s)
- Raissa I Hogan
- School of Natural Sciencecs & Ryan Institute, University of Galway, University Road, Galway, Ireland
| | - Kevin Hopkins
- Institute of Zoology, Zoological Society of London, Regent's Park, London, UK
| | - Andrew J Wheeler
- School of Biological, Earth & Environmental Science, Irish Centre for Research in Applied Geosciences, University College Cork, Ireland
| | - Chris Yesson
- Institute of Zoology, Zoological Society of London, Regent's Park, London, UK
| | - A Louise Allcock
- School of Natural Sciencecs & Ryan Institute, University of Galway, University Road, Galway, Ireland.
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Kushida Y, Imahara Y, Wee HB, Fernandez-Silva I, Fromont J, Gomez O, Wilson N, Kimura T, Tsuchida S, Fujiwara Y, Higashiji T, Nakano H, Kohtsuka H, Iguchi A, Reimer JD. Exploring the trends of adaptation and evolution of sclerites with regards to habitat depth in sea pens. PeerJ 2022; 10:e13929. [PMID: 36164604 PMCID: PMC9508890 DOI: 10.7717/peerj.13929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Accepted: 07/31/2022] [Indexed: 01/19/2023] Open
Abstract
Octocorals possess sclerites, small elements comprised of calcium carbonate (CaCO3) that are important diagnostic characters in octocoral taxonomy. Among octocorals, sea pens comprise a unique order (Pennatulacea) that live in a wide range of depths. Habitat depth is considered to be important in the diversification of octocoral species, but a lack of information on sea pens has limited studies on their adaptation and evolution across depth. Here, we aimed to reveal trends of adaptation and evolution of sclerite shapes in sea pens with regards to habitat depth via phylogenetic analyses and ancestral reconstruction analyses. Colony form of sea pens is suggested to have undergone convergent evolution and the loss of axis has occurred independently across the evolution of sea pens. Divergences of sea pen taxa and of sclerite forms are suggested to depend on habitat depths. In addition, their sclerite forms may be related to evolutionary history of the sclerite and the surrounding chemical environment as well as water temperature. Three-flanged sclerites may possess the tolerance towards the environment of the deep sea, while plate sclerites are suggested to be adapted towards shallower waters, and have evolved independently multiple times. The common ancestor form of sea pens was predicted to be deep-sea and similar to family Pseudumbellulidae in form, possessing sclerites intermediate in form to those of alcyonaceans and modern sea pens such as spindles, rods with spines, and three-flanged sclerites with serrated edges sclerites, as well as having an axis and bilateral traits.
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Affiliation(s)
- Yuka Kushida
- Faculty of Geo-Environmental Science, Rissho University, Kumagaya, Saitama, Japan,Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan,International Center for Island Studies Amami Station, Kagoshima University, Amami, Kagoshima, Japan,Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Okinawa, Japan
| | - Yukimitsu Imahara
- Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan,Kuroshio Biological Research Foundation, Otsuchi, Kochi, Japan,Octocoral Research Laboratory, Wakayama, Wakayama, Japan
| | - Hin Boo Wee
- Institut Perubahan Iklim, Universiti Kebangsaan Malaysia, Selangor Darul Ehsan, Malaysia
| | - Iria Fernandez-Silva
- Department of Biochemistry, Genetics and Immunology, Campus Universitario, University of Vigo, Vigo, Spain
| | - Jane Fromont
- Collections & Research, Western Australian Museum, Welshpool, Western Australia, Australia
| | - Oliver Gomez
- Collections & Research, Western Australian Museum, Welshpool, Western Australia, Australia
| | - Nerida Wilson
- Collections & Research, Western Australian Museum, Welshpool, Western Australia, Australia,School of Biological Sciences, University of Western Australia, Perth, Western Australia, Australia
| | - Taeko Kimura
- Department of Life Sciences, Graduate School of Bioresources, Mie University, Tsu, Mie, Japan
| | - Shinji Tsuchida
- Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Kanagawa, Japan
| | - Yoshihiro Fujiwara
- Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Kanagawa, Japan
| | - Takuo Higashiji
- Okinawa Churaumi Aquarium, Okinawa Churashima Foundation, Motobu, Okinawa, Japan
| | - Hiroaki Nakano
- Shimoda Marine Research Center, University of Tsukuba, Shimoda, Shizuoka, Japan
| | - Hisanori Kohtsuka
- Misaki Marine Biological Station, Graduate School of Science, University of Tokyo, Miura, Kanagawa, Japan
| | - Akira Iguchi
- Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan,Research Laboratory on Environmentally-Conscious Developments and Technologies [E-Code], National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan
| | - James Davis Reimer
- Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Okinawa, Japan,Tropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa, Japan
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